dya_1282

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## ATGAGTAGAAACATGTTCCGAGATTTAAAGAACCAAGGAAGCAGTGTGAGGGCAGAAATATCGCTGGCGGACGGATCACGACAATATGCGATTGGAGGGTTCTCGTCGAAAGTCGAGTTTGGAGGGCAAGTGTTTAATACAACATTCATGATCATTCCCAACGTAGAAGGAGGAATCCTCCAAGAATGGATTTTCTGGCAGGGGCAGAAAGCGTGCTGAGGTGTGGCGGACTAGAGCTGGATAAAAGAAGG ************************************************.............(((.((((.(((((..............((((((((((((..((.....((..(((.((((((((((((((......))))))..)).)).)))).)))...))..)))))))))))))).....))))))))).)))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM1528802 follicle cells	M043 female body	V052 head	M026 head	V058 head
..................................................................................................................................................................................TCCAAGAATGGATTTTCTGGCAGGGGC..............................................	27	0	1	15.00	15	15	0	0	0	0
..................................................................................................................................................................................TCCAAGAATGGATGTTCTGGCAGGGGC..............................................	27	1	1	1.00	1	1	0	0	0	0
..................................................................................................................................................................................TCCAAGAATGGATCTTCTGGCAGGGGC..............................................	27	1	1	1.00	1	1	0	0	0	0
................................................................................................................................AGTGTTTAATAGAACATT.........................................................................................................	18	1	2	0.50	1	0	0	1	0	0
.................................................................................................................................................................................................TCTGGCAGGGGCAGAAAGCGTGCTG.................................	25	0	3	0.33	1	0	1	0	0	0
..............................................................................................................................................................................................TTTTCTGGCAGGGGCAGAAAGCGTG....................................	25	0	3	0.33	1	0	1	0	0	0
............ATGGTCCGAGCTTGAAAGA............................................................................................................................................................................................................................	19	3	16	0.31	5	0	4	0	1	0
..........................................................................................................................................ACAACATTCATGATCATTCCCAACGT.......................................................................................	26	0	4	0.25	1	0	1	0	0	0
.....................................................................................................................................................................................................................TGCTGAGGTGTGGCGGACTAGAGC..............	24	0	5	0.20	1	0	1	0	0	0
........................................................................................................................................................................................................GGGGCAGAAAGCGTGCTGAGGTG............................	23	0	5	0.20	1	0	1	0	0	0
.............TGTTCCGAGATTTAAAGCACCAAGGA....................................................................................................................................................................................................................	26	1	6	0.17	1	1	0	0	0	0
.....................................................AGAGATATTGTTGGCGGAC...................................................................................................................................................................................	19	3	15	0.13	2	0	0	0	2	0
...................................AAGAAGCAGTTTGAGGGC......................................................................................................................................................................................................	18	2	20	0.10	2	2	0	0	0	0
.........................................................................................................TCGATAGTCGAATTTGG.................................................................................................................................	17	2	19	0.05	1	1	0	0	0	0
...................................AAGAAGCAGTGTGGGGGC......................................................................................................................................................................................................	18	2	19	0.05	1	1	0	0	0	0
......................................AAGCAGTGTGGGGGC......................................................................................................................................................................................................	15	1	20	0.05	1	1	0	0	0	0
..............................................................................................................................................................TAAGGTACAAGGAGGAATC..........................................................................	19	3	20	0.05	1	0	0	0	0	1
...............................................................................................................................................................................................................AATGCGTTCTGAGGTGCGG.........................	19	3	20	0.05	1	0	0	0	0	1

TACTCATCTTTGTACAAGGCTCTAAATTTCTTGGTTCCTTCGTCACACTCCCGTCTTTATAGCGACCGCCTGCCTAGTGCTGTTATACGCTAACCTCCCAAGAGCAGCTTTCAGCTCAAACCTCCCGTTCACAAATTATGTTGTAAGTACTAGTAAGGGTTGCATCTTCCTCCTTAGGAGGTTCTTACCTAAAAGACCGTCCCCGTCTTTCGCACGACTCCACACCGCCTGATCTCGACCTATTTTCTTCC ************************************************.............(((.((((.(((((..............((((((((((((..((.....((..(((.((((((((((((((......))))))..)).)).)))).)))...))..)))))))))))))).....))))))))).)))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M043 female body	M056 embryo
.......................................................................GCCTAGTGCTGTTATACGCTAACCT...........................................................................................................................................................	25	0	1	2.00	2	2	0
...........................................................................................................................CCCGTTCACAAATTATGTTGTAAGT.......................................................................................................	25	0	2	1.00	2	2	0
................................................................................................CCCAAGAGCAGCTTTCAGCTCAAACCT................................................................................................................................	27	0	3	0.67	2	0	2
..................................................................................................................................................................................................................CGCACGACTCCACACCGCCTGATCTC...............	26	0	5	0.60	3	2	1
.......................................................................................................................................................................................CTTACCTAAAAGACCGTCCCCGTCTTT.........................................	27	0	2	0.50	1	1	0
...........................................CACACTCCCGTCTTTATAGCGACCGCCT....................................................................................................................................................................................	28	0	2	0.50	1	1	0
.................................................................................................................................................................................................................TCGCACGACTCCACACCGCCTGATCTC...............	27	0	5	0.40	2	2	0
................................GGTTCCTTCGTCACACTCCCGTCTTTAT...............................................................................................................................................................................................	28	0	3	0.33	1	1	0
...............AAGGCTCTAAATTTCTTGGTTCCTTCGT................................................................................................................................................................................................................	28	0	3	0.33	1	1	0
..............................................................................................................................................................................................AAAAGACCGTCCCCGTCTTTCGCACGACT................................	29	0	3	0.33	1	1	0
..............................................................................................................................................GTAAGTACTAGTAAGGGTTGCATCTT...................................................................................	26	0	4	0.25	1	1	0
.......................................TCGTCACACTCCCGTCTTTATAGCGA..........................................................................................................................................................................................	26	0	4	0.25	1	1	0
.....................................................................................................................................................................................................................ACGACTCCACACCGCCTGATCTCGACCT..........	28	0	4	0.25	1	1	0
................................................................................................................................................................................................................TTCGCACGACTCCACACCGCCTGAT..................	25	0	4	0.25	1	1	0
.........................................GTCACACTCCCGTCTTTATAGCGA..........................................................................................................................................................................................	24	0	4	0.25	1	0	1
........................................................................................................................................................................................................................ACTCCACACCGCCTGATCTCGACCTAT........	27	0	4	0.25	1	1	0
......................................................................................................................................................................................................................CGACTCCACACCGCCTGATCTCGACCT..........	27	0	4	0.25	1	1	0
...................................................................................................................................................................................................................GCACGACTCCACACCGCCTGATCTC...............	25	0	5	0.20	1	1	0
...................................................................................................................................................................................................................GCACGACTCCACACCGCCTGATCTCGAC............	28	0	5	0.20	1	1	0
.......................................................................................................................................................................................................................GACTCCACACCGCCTGATCTC...............	21	0	5	0.20	1	1	0
.....................................................................................................................................................................................................................ACGACTCCACACCGCCTGATCTCG..............	24	0	5	0.20	1	1	0
........................................................................................................................................................................................................CCCCGTCTTTCGCACGACTCCACACC.........................	26	0	5	0.20	1	1	0
......................................................CTTTATAGCGACCGCCTGCCTAGT.............................................................................................................................................................................	24	0	7	0.14	1	1	0
..............................................................................................................................................................................................................................CACCGCCTGATCTCGACCTATTTTCTT..	27	0	7	0.14	1	1	0
...........................................................................................................................................................................................................................CCACACCGCCTGATCTCGACCTATTTT.....	27	0	7	0.14	1	0	1
..............................................................................................................TCAGCTCAAACCTCCCGTTCA........................................................................................................................	21	0	7	0.14	1	0	1
......................................................CTTTATAGCGACCGCCTGCCTAGTGC...........................................................................................................................................................................	26	0	7	0.14	1	1	0
...........................................................................................................................................................................................................................CCACACCGCCTGATCTCGACCTATTTTCT...	29	0	7	0.14	1	1	0
...........................................................................................................................................................................................................................CCACACCGCCTGATCTCGGCCTATTTT.....	27	1	7	0.14	1	1	0
...........................................................................................................................................................................................................................CCACACCGCCTGATCTCGACCTATTT......	26	0	7	0.14	1	1	0
...........................................................................................................................................................................................................................CCACACCGCCTGATCTCGACCT..........	22	0	7	0.14	1	0	1
................................................................................................................................................................................................................................CCGCCTGATCTCGACCGATTTTCTT..	25	1	8	0.13	1	1	0
................................................................................................................................................................................................................................CCGCCTGATCTCGACCTATTTTCTT..	25	0	8	0.13	1	1	0

Species	Coordinate	ID	Alignment
droYak3	v2_chrUh_004:358731-358981 +	dya_1282	ATGAGTAGAAACATGT---------TCCGAGATTTAAAGAAC-CAAGGAAG------CAGTGTGAGGGCAGAAATATCGCTGGCGGACGGATCACGA---CAATATGCGATTGGAGGGTTCTCGTCGAAAGTCGAGTTTGGAGGGCAAGTGTTTAATACAACATTCATGATCATTCCCAACGTAGAAGGAGGA-ATCCTCCAAG-AATGGATTTTCTGGCAGGGGCAGAAAGCGTGCTGAGGTGTGGCGGA--CTAGAGCTGGATAAA--------------------A--GAAGG
droEre2	scaffold_4784:24584438-24584694 +		ATAAGCGTGAGATAGT---------ACAGGGACCTAAGGCAA-CAGGGCAAATGGAGCGGATCTGGATCGGAGATAACGCTGGCCAATGGGTCAAAG---CAAAAGACCGTAGGAAAGCTAACAGCGGAAATCCGGTTCGGGGGTTTT-ATTTCCAAATATCGTTCATTGTACTGACATACGTATCAGGAGAG-ATATTTCTAGGGATGGACTATCTAGCCGGAGCCAACAGCACATTACGGAGTGTCGAA--TTGGACCTGGAGATC--------------------A--CAACG
droSec2	scaffold_43:189729-189974 -		AACTGCGGAAACTAAT---------GCGGTTTACGAGGTTAT-CGGAACAAGTGAAACT---TGACCGC----ATAAACATGAAGGACCGCATATACACGAGGAGGTCCGGTTC----------GGAAGAATCCGGTTTAGAGGAAGGTCATTCACAATATCGTTCATGATACTGGAGAAGGTGACAAGGGAT-ATCCTTTTGGGCATGGATTTCCTGGCAGGAGCTAACAGCGGACTGATATGCTGAAAACTCTAGAGCTGGAAATA--------------------A--CAGTG
droSim2	node_29724:2075-2318 -		ATATGCTTG----------------------ACCTCAGGGAA-CAATGAAAATAGAGCGGAGCTCGATCGGAGATAATGCTGCCCAATGGGTCAAAA---CAAAATACCGTAGGAAAGTTTACAGCTGAAATCCGGTTTGGGGGAATT-CTTTCCAAATATCGTTCATGGCACTGGTACACTTATCAGGAGGG-ATACTTCAGGGGATGGACTTCCTAGCCGGAGCCAACAGCACATTACGGTGTGGCGAA--ATTGAGCTGGATATC--------------------A--CAACG
dm3	chr3RHet:1960843-1960966 -		ATAAGCTTGGGCACGT---------ACATGGACCTCAGGAAA-CATGGCAAACAGAGCGGAGCCCGATCGGAGATAACGTTAGCC--------AAAA---CAAAAGAACGTAAGAAAGTTTACAATGGAAAGCCGGTTCGGAGGG-------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1	scf7180000409159:24892-25148 -		ATCGACAGGAGAAGAT---------GCCTAAACTTGAGGAAG-CAGGGTAGGTGGAACGAGGCGGG-GGAGGAATAACCCTAGCAAACGGGACAAGA---CAAAAGGTCATAGGGAACTTCACCACGCTCGTCCGGTTCGGGAGCAAGCGATTCAAGCTAAGTTTCTTGATCCTAGACCAGGTAACAGGAGGA-ATTCTGCTTGGGATGGACTTCTTGGCAAAAGTAGGAACTATAATACGATGCGGCCAC--CAAGAAATAGCCATC--------------------A--GAGAG
droBia1	scf7180000301511:8670-8921 -		ATAAGCAAGGAACTGG---------CGGACAACCTGGCTGCC-CTCTGGAGGATAACGAGGACACGGCGGCAAGTAAGGTTGGCAGACGGAAAATGC---GGTGGGATCAATGAACAGCTGGAGGTGGAAATCGCATTCGGGAACAAGCGACTGACCAT---------GATCCTGCACATACTATCAGGGGTA-GTGGTGTTAGGATGGAACTTTCTAACTCAGGTCGGAACCGAGATAAGGTGTGTTGGA--CACGAGGTGATAATACCGGC-------------------CAGG
droTak1	scf7180000415682:12178-12430 -		ATCAGCAAGAGAAGAT---------ACAGCGAATTAAGAAGA-CATGGAAGATGGAGGAAAGTGAGGACAGAGATAAAGATGGCAAACGGATTAAGA---CAAAAATCAGATTGAGACTTCAAAGCCAGAGTGCAATTCGCCGGAGAAGAATTCGAATTGGATTTTCTGATTTTAAACCAGGTTACAGGAGGG-ATACTACTAGGAATGGACTTTCTGGCGAAGACACAGACAAGGATTCAATGCGGCAAT--CTGGAATTGGACATC--------------------A-------
droEle1	scf7180000491238:1243806-1244065 +		ATCAGCAAGAGAAGAA---------ACAACGAATTGAGAAAA-TATGGAAAATGGAGGAAGGGAAGGACAGAAATAACATTAGCGAACGGATCAAAG---CAAAGATCGGATGGAGACTTTACAACCAACATACAGTTCGCAGGAGAAGAATTCGAGTTGGACTTCCTCATCTTAAATCAGGTGACAGGAGGA-ATATTATTAGGAATAGACTTTCTGGCCAAAACGCGCACAAGAATCCAATGCGGCAAC--CTGGAATTAGATATC--------------------ACCGAGGC
droRho1	scf7180000764534:3454-3711 +		ATAAGCAGAAACAGAT---------ATCAAGATCTGAAACAC-CAGGGCAAATGGTGTGGAGCCCGTGCAGAAATAACAATGGCAAACGGAACAACG---CAGAAGGCGATAGGAGAATTCACGGCAGAAATCCAATTTGGAGGAAAATTGTTCAGTGTGACGTTTATGATACTTACAGAAGTGGCAGGAGGA-ATACTGTAAGGGATGGACTTTCTGGCAGGGGTACACAGCACGCTGAGGTGTGGAAAC--TTAGAGCTGGAAATA--------------------A--GAGAG
droFic1	scf7180000453332:5797-6056 -		AAGAGTTGGTGAAAAT---------G-------CTGGCTGAA-GTAGGGAGGATCGAGGAAACAAGACGGCAAGATAGGTTGGAAGACGGAAGGTGC---AGCGAGATATCATCGCGGCTCAAGGTCACGGTCGAATTCGGAAACAAGAGACTAGACATGAGTTTGCTGGTACTCCCAGGAGTGGTAGACGAA-TTGGTGCTAGGATGGAATTTCCTAACAGGCATAGGAGCCGAGGTCAAATGCGCTGGC--CACGAACTACGTATTCCGGCGAGA-----------A--AAAGG
droKik1	scf7180000302809:104521-104778 +		ATAAGCAGCAACATGT---------TCCAGGATCTTAAAGAG-CAAGGAAGATGGTGGGGAACAAGGACAGAAATCACGCTCGCCAACGGCTCCCGG---CAAACAGCGATAGGAAGATTTACGGCAGAGATTGGATTCAGGGGAAGATCATTCAGCATAACGTTCATGATCTTAACAAAAGTATCCGGAGAG-ATTCTGTTAGGTATGGACTTCCTAGCGGGAACAGGCAGCACATTGAGGTGTGGCGAA--CTGGAGCTGGAGATA--------------------A--GAGCG
droAna3	scaffold_12586:515787-516031 -		ATTGGAAGAGGCTGCAGAGAATTAGTGGAACGTCTCGAAATCCCA-------TGGAAGCCATGGCATGCTAAGGTCCGAACGGCGAATGGATCGCAG---CAACAGACCTTAGGCAAGTTGAAGATGCAAGTGGAGTACAAAAAAAGGACTCGAGAAATCC-TATTCTACCTATGTCCATCGTTGGAGCAGGAATTATACCTAGGAGTGA-ATTTCTGGCAGGAGTTTGAAATCGGGTC----------------GGAGTTGTTT-GT--------------------A--GTATG
droBip1	scf7180000391938:495-517 -		GACCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGAGCCGAA--------------------G--AGGTG
dp5	Unknown_singleton_3702:503-765 -		GCGAGTAGA------------------------CTGGGGGAA-GTGAGGCGACAGAAAGAAACGAGGAAGCTGGTACGGCTGGCTGACGGACGCAGC---CGGGAAATCAATGCCCAGATCGAGGTGGAGTTGGCCTTCGGGGACAAGATCGTTACAATCCCGTTTCTGGTGATGCCCGGAGTAATAGATGAG-CTGGTCCTGGGATGGGATTTCCTCGCCGCGGTCGGAGCAGAGGTGACCTGTGCGGGA--CACAGGGTTGTGATCCCTGCGAGAGGCCACCGCCAG--GAGCG
droPer2	scaffold_169:92109-92371 +		GCGAGTAGA------------------------CTGGGGGAA-GAGAGGCGACAGAAAGAAACGAGGAAGCTGGTGCGGCTGGCTGACGGACGCAGC---CGGGAAATCAATTCCCAGATCGAGGTGGAGTTGGCCTTCGGGGACAAGATCGTTACAATCCCGTTTCTCGTGATGCCCGGAGTAATAGATGAG-CTGGTCCTGGGATGGGATTTCCTCGCCGCGGTCGGAGCAGAGGTGACCTGTGCGGGA--CACAGGGTTGTGATCCCTGCGAGAGGCCACCGCCAG--GGGCG
droWil2	scf2_1100000003832:455-721 +		ATGAGCCGACAGATGG---------CGGAAAATCTGAGAAAC-AAAGGAGACCGAGAGACCACAAACAAGCAAGTATACATGGCAGACGGGAAGATC---AGAAATATCAACGAGCAGTGGACAGGATACGTTCGATTCGGAAACAAAGAAATGAACATAACATTTCTCATCATGCCAGACGGAATAGATGCC-TTAATATTAGGATGGAATTTCTTAAGGCTAATGGACACCGAAATAGCATGCGGAGGC--CACAGGATAAAAATTCCAACGA-----------CAA--AAAGG
droVir3	scaffold_12840:35903-35972 +		GAGTAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTTGTTGTAAAGGCGG------------------------------------------------------------CACGGA--AAGGTGCCAGATAAC--------------------G--GAGGG
droMoj3	scaffold_1681:2391-2638 -		ATCAGTGAGAGGCTCG---------CTGAGAGGCTCGAAGGA-GTGGGCGTGGTGCGCGCCACACGGCGGCGCATACGCTTGGCGGACGGCAGTTGC---AGTCAGGTGGACTCGCAGCTGGAGACGACGATCAGCCTGGGAAATCAGCAAATCCAGATACCGTTGCTGATCCTGCCAGGAGTGATCGACGAT-TTGGTGCTAGGCTGGGATTTCTTGGCTAGTATAGGCACCACACTGGAGTGTGGCGGT--TTGGCGCTGAA--------------------------------
droGri2	scaffold_15124:67674-67688 +		CTAAAAAAAAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droYak3

ATGAGTAGAAACATGT---------TCCGAGATTTAAAGAAC-CAAGGAAG------CAGTGTGAGGGCAGAAATATCGCTGGCGGACGGATCACGA---CAATATGCGATTGGAGGGTTCTCGTCGAAAGTCGAGTTTGGAGGGCAAGTGTTTAATACAACATTCATGATCATTCCCAACGTAGAAGGAGGA-ATCCTCCAAG-AATGGATTTTCTGGCAGGGGCAGAAAGCGTGCTGAGGTGTGGCGGA--CTAGAGCTGGATAAA--------------------A--GAAGG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
......................................................................................................................................................................................................TCCAAG-AATGGATTTTCTGGCAGGGGC......................................................................	27	1	15.00	15	0	0	0	0	0	0	0	0	0	0	15
......................................................................................................................................................................................................................TCTGGCAGGGGCAGAAAGCGTGCTG.........................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TTTTCTGGCAGGGGCAGAAAGCGTG............................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................ACAACATTCATGATCATTCCCAACGT.................................................................................................................	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TGCTGAGGTGTGGCGGA--CTAGAGC....................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................GGGGCAGAAAGCGTGCTGAGGTG....................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

ATAAGCGTGAGATAGT---------ACAGGGACCTAAGGCAA-CAGGGCAAATGGAGCGGATCTGGATCGGAGATAACGCTGGCCAATGGGTCAAAG---CAAAAGACCGTAGGAAAGCTAACAGCGGAAATCCGGTTCGGGGGTTTT-ATTTCCAAATATCGTTCATTGTACTGACATACGTATCAGGAGAG-ATATTTCTAGGGATGGACTATCTAGCCGGAGCCAACAGCACATTACGGAGTGTCGAA--TTGGACCTGGAGATC--------------------A--CAACG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droSec2

AACTGCGGAAACTAAT---------GCGGTTTACGAGGTTAT-CGGAACAAGTGAAACT---TGACCGC----ATAAACATGAAGGACCGCATATACACGAGGAGGTCCGGTTC----------GGAAGAATCCGGTTTAGAGGAAGGTCATTCACAATATCGTTCATGATACTGGAGAAGGTGACAAGGGAT-ATCCTTTTGGGCATGGATTTCCTGGCAGGAGCTAACAGCGGACTGATATGCTGAAAACTCTAGAGCTGGAAATA--------------------A--CAGTG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

droSim2

ATATGCTTG----------------------ACCTCAGGGAA-CAATGAAAATAGAGCGGAGCTCGATCGGAGATAATGCTGCCCAATGGGTCAAAA---CAAAATACCGTAGGAAAGTTTACAGCTGAAATCCGGTTTGGGGGAATT-CTTTCCAAATATCGTTCATGGCACTGGTACACTTATCAGGAGGG-ATACTTCAGGGGATGGACTTCCTAGCCGGAGCCAACAGCACATTACGGTGTGGCGAA--ATTGAGCTGGATATC--------------------A--CAACG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.........................................................................................................................................................CCAAATATCGTTCATGGCACTGGTACACT..................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................TACCGTAGGAAAGTTTACAGCTGAAA.....................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................TTACGGTGTGGCGAA--ATTGAGCTGG.................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................TAGAGCGGAGCTCGATCGGAGATAA...........................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................TAGAGCGGAGCTCGATCGGAGATAATGC........................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.......................................................................................TGGGTCAAAA---CAAAATACCGTAGGAAAGTT................................................................................................................................................................................	30	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

dm3

ATAAGCTTGGGCACGT---------ACATGGACCTCAGGAAA-CATGGCAAACAGAGCGGAGCCCGATCGGAGATAACGTTAGCC--------AAAA---CAAAAGAACGTAAGAAAGTTTACAATGGAAAGCCGGTTCGGAGGG-------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
........................................................GCGGAGCCCGATCGGAGATAAC..........................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AAAA---CAAAAGAACGTAAA......................................................................................................................................................................................	18	7	1.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............T---------ACATGGACCTCAGGAAA-CATGGCAAA....................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................TGGACCTCAGGAAA-CATGGCAAACAGA................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................CAAACAGAGCGGAGCCCGATC...................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................AAAGTTTACAATGGAAAGCCG.................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AAAA---CAAAAGAACGTAAAC.....................................................................................................................................................................................	19	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEug1

ATCGACAGGAGAAGAT---------GCCTAAACTTGAGGAAG-CAGGGTAGGTGGAACGAGGCGGG-GGAGGAATAACCCTAGCAAACGGGACAAGA---CAAAAGGTCATAGGGAACTTCACCACGCTCGTCCGGTTCGGGAGCAAGCGATTCAAGCTAAGTTTCTTGATCCTAGACCAGGTAACAGGAGGA-ATTCTGCTTGGGATGGACTTCTTGGCAAAAGTAGGAACTATAATACGATGCGGCCAC--CAAGAAATAGCCATC--------------------A--GAGAG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ATAAGCAAGGAACTGG---------CGGACAACCTGGCTGCC-CTCTGGAGGATAACGAGGACACGGCGGCAAGTAAGGTTGGCAGACGGAAAATGC---GGTGGGATCAATGAACAGCTGGAGGTGGAAATCGCATTCGGGAACAAGCGACTGACCAT---------GATCCTGCACATACTATCAGGGGTA-GTGGTGTTAGGATGGAACTTTCTAACTCAGGTCGGAACCGAGATAAGGTGTGTTGGA--CACGAGGTGATAATACCGGC-------------------CAGG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ATCAGCAAGAGAAGAT---------ACAGCGAATTAAGAAGA-CATGGAAGATGGAGGAAAGTGAGGACAGAGATAAAGATGGCAAACGGATTAAGA---CAAAAATCAGATTGAGACTTCAAAGCCAGAGTGCAATTCGCCGGAGAAGAATTCGAATTGGATTTTCTGATTTTAAACCAGGTTACAGGAGGG-ATACTACTAGGAATGGACTTTCTGGCGAAGACACAGACAAGGATTCAATGCGGCAAT--CTGGAATTGGACATC--------------------A-------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ATCAGCAAGAGAAGAA---------ACAACGAATTGAGAAAA-TATGGAAAATGGAGGAAGGGAAGGACAGAAATAACATTAGCGAACGGATCAAAG---CAAAGATCGGATGGAGACTTTACAACCAACATACAGTTCGCAGGAGAAGAATTCGAGTTGGACTTCCTCATCTTAAATCAGGTGACAGGAGGA-ATATTATTAGGAATAGACTTTCTGGCCAAAACGCGCACAAGAATCCAATGCGGCAAC--CTGGAATTAGATATC--------------------ACCGAGGC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ATAAGCAGAAACAGAT---------ATCAAGATCTGAAACAC-CAGGGCAAATGGTGTGGAGCCCGTGCAGAAATAACAATGGCAAACGGAACAACG---CAGAAGGCGATAGGAGAATTCACGGCAGAAATCCAATTTGGAGGAAAATTGTTCAGTGTGACGTTTATGATACTTACAGAAGTGGCAGGAGGA-ATACTGTAAGGGATGGACTTTCTGGCAGGGGTACACAGCACGCTGAGGTGTGGAAAC--TTAGAGCTGGAAATA--------------------A--GAGAG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AAGAGTTGGTGAAAAT---------G-------CTGGCTGAA-GTAGGGAGGATCGAGGAAACAAGACGGCAAGATAGGTTGGAAGACGGAAGGTGC---AGCGAGATATCATCGCGGCTCAAGGTCACGGTCGAATTCGGAAACAAGAGACTAGACATGAGTTTGCTGGTACTCCCAGGAGTGGTAGACGAA-TTGGTGCTAGGATGGAATTTCCTAACAGGCATAGGAGCCGAGGTCAAATGCGCTGGC--CACGAACTACGTATTCCGGCGAGA-----------A--AAAGG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ATAAGCAGCAACATGT---------TCCAGGATCTTAAAGAG-CAAGGAAGATGGTGGGGAACAAGGACAGAAATCACGCTCGCCAACGGCTCCCGG---CAAACAGCGATAGGAAGATTTACGGCAGAGATTGGATTCAGGGGAAGATCATTCAGCATAACGTTCATGATCTTAACAAAAGTATCCGGAGAG-ATTCTGTTAGGTATGGACTTCCTAGCGGGAACAGGCAGCACATTGAGGTGTGGCGAA--CTGGAGCTGGAGATA--------------------A--GAGCG	Size	Hit Count	Total Norm	Total
No Reads

droAna3

ATTGGAAGAGGCTGCAGAGAATTAGTGGAACGTCTCGAAATCCCA-------TGGAAGCCATGGCATGCTAAGGTCCGAACGGCGAATGGATCGCAG---CAACAGACCTTAGGCAAGTTGAAGATGCAAGTGGAGTACAAAAAAAGGACTCGAGAAATCC-TATTCTACCTATGTCCATCGTTGGAGCAGGAATTATACCTAGGAGTGA-ATTTCTGGCAGGAGTTTGAAATCGGGTC----------------GGAGTTGTTT-GT--------------------A--GTATG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.............GCAGAGAATTAGTGGAACGTCT.....................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.....................................................................................AATGGATCGCAG---CAACAGACCTTAGG......................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................ATTCTACCTATGTCCATCGTTGGAG............................................................................................................	25	2	0.50	1	1	0	0	0	0	0
...................................................................................................................................................................ATTCTACCTATGTCCATCGTTGG..............................................................................................................	23	2	0.50	1	1	0	0	0	0	0
.........................................................................................................................................................................................................TAGGAGTGA-ATTTCTGGCAGGAGT......................................................................	24	15	0.47	7	5	2	0	0	0	0
.........................................................................................................................................................................................................TAGGAGTGA-ATTTCTGGCAGGAGTT.....................................................................	25	15	0.40	6	5	1	0	0	0	0
.........................................................................................................................................................................................................TAGGAGTGA-ATTTCTGGCAGGAG.......................................................................	23	15	0.33	5	5	0	0	0	0	0
..................................................................TGCTAAGGTCCGAACGGCGAATGGA.............................................................................................................................................................................................................	25	6	0.33	2	2	0	0	0	0	0
................................................................CATGCTAAGGTCCGAACGGCGAATGGA.............................................................................................................................................................................................................	27	6	0.33	2	2	0	0	0	0	0
.........................................................................................................................................................................................................TAGGAGTGA-ATTTCTGGCAGGA........................................................................	22	15	0.27	4	2	2	0	0	0	0
..............................................................................................................................................................................GTCCATCGTTGGAGCAGGAATTATACC...............................................................................................	27	13	0.23	3	3	0	0	0	0	0
................................................................CATGCTAAGGTCCGAACGGCGAATGGAT............................................................................................................................................................................................................	28	6	0.17	1	1	0	0	0	0	0
.........................................................GCCATGGCATGCTAAGGTCCGAAC.......................................................................................................................................................................................................................	24	12	0.17	2	1	1	0	0	0	0
................................................................CATGCTAAGGTCCGAACGGCGAATGG..............................................................................................................................................................................................................	26	6	0.17	1	1	0	0	0	0	0
..................................................................TGCTAAGGTCCGAACGGCGA..................................................................................................................................................................................................................	20	6	0.17	1	1	0	0	0	0	0
................................................................CATGCTAAGGTCCGAACGGCGAAT................................................................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0
....................................................TGGAAGCCATGGCATGCTAAGGTCC...........................................................................................................................................................................................................................	25	14	0.14	2	0	2	0	0	0	0
.........................................................................................................................................................................................................TAGGAGTGA-ATTTCTGGCAGGAGTTT....................................................................	26	15	0.13	2	2	0	0	0	0	0
........................GTGGAACGTCTCGAAATCCCA-------TGG.................................................................................................................................................................................................................................................	24	8	0.13	1	1	0	0	0	0	0
.........................................................................GTCCGAACGGCGAATGGATCGCAG---C...................................................................................................................................................................................................	25	9	0.11	1	1	0	0	0	0	0
..........................................................................TCCGAACGGCGAATGGATCGCA........................................................................................................................................................................................................	22	9	0.11	1	1	0	0	0	0	0
.......................................................................................................................................................................TACCTATGTCCATCGTTGGAGCAGGA.......................................................................................................	26	12	0.08	1	0	0	1	0	0	0
.........................................................................................................................................................................CCTATGTCCATCGTTGGAGCAG.........................................................................................................	22	12	0.08	1	1	0	0	0	0	0
...................................................................................................................................................................................TCGTTGGAGCAGGAATTATACC...............................................................................................	22	13	0.08	1	1	0	0	0	0	0
...............................................................................................................................................................................TCCATCGTTGGAGCAGGAATTATACC...............................................................................................	26	13	0.08	1	0	1	0	0	0	0
...........................................CA-------TGGAAGCCATGGCATGCTAAGGTCC...........................................................................................................................................................................................................................	27	13	0.08	1	0	1	0	0	0	0
......................................................GAAGCCATGGCATGCTAAGGTCC...........................................................................................................................................................................................................................	23	14	0.07	1	0	1	0	0	0	0
..................................................................................................................................................................................................TTATACCTAGGAGTGA-ATTTCTGGCAG..........................................................................	27	14	0.07	1	1	0	0	0	0	0
............................................................................................................................................................................................CAGGAATTATACCTAGGAGTGA-ATTTC................................................................................	27	14	0.07	1	0	1	0	0	0	0
....................................................TGGAAGCCATGGCATGCTAAGGTC............................................................................................................................................................................................................................	24	14	0.07	1	0	1	0	0	0	0
..............................................................................................................................................................................................GGAATTATACCTAGGAGTGA-ATTTCTGG.............................................................................	28	14	0.07	1	0	1	0	0	0	0
.........................................................................................................................................................................................................TAGGAGTGA-ATTTCTGGCAGGAGA......................................................................	24	15	0.07	1	1	0	0	0	0	0
........................................TCCCA-------TGGAAGCCATGGCATGCTAAGG..............................................................................................................................................................................................................................	27	15	0.07	1	1	0	0	0	0	0
..........................................................................................................................................................................................................AGGAGTGA-ATTTCTGGCAGGAGTT.....................................................................	24	15	0.07	1	1	0	0	0	0	0
...............................................................................................................................................................................TCCATCGTTGGAGCAGGAATTATA.................................................................................................	24	19	0.05	1	0	1	0	0	0	0
...................................................................................................................................................................................TCGTTGGAGCAGGAATTA...................................................................................................	18	19	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................................GTCCATCGTTGGAGCAGGAATTATAC................................................................................................	26	19	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................................GTCCATCGTTGGAGCAGGAA......................................................................................................	20	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................................GAGTACAAAAAAAGGACTCGAGAA...........................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0

droBip1

GACCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGAGCCGAA--------------------G--AGGTG	Size	Hit Count	Total Norm	Total
No Reads

dp5

GCGAGTAGA------------------------CTGGGGGAA-GTGAGGCGACAGAAAGAAACGAGGAAGCTGGTACGGCTGGCTGACGGACGCAGC---CGGGAAATCAATGCCCAGATCGAGGTGGAGTTGGCCTTCGGGGACAAGATCGTTACAATCCCGTTTCTGGTGATGCCCGGAGTAATAGATGAG-CTGGTCCTGGGATGGGATTTCCTCGCCGCGGTCGGAGCAGAGGTGACCTGTGCGGGA--CACAGGGTTGTGATCCCTGCGAGAGGCCACCGCCAG--GAGCG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGG............................................................................................	21	13	24.31	316	0	251	6	0	9	1	7	42	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGA..........................................................................................	23	13	19.38	252	0	68	2	0	8	0	8	166	0	0
................................................GCGACAGAAAGAAACGAGGAAGC.................................................................................................................................................................................................................................	23	4	18.00	72	0	49	5	0	4	0	4	10	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGG...........................................................................................	22	13	11.31	147	0	87	3	0	4	0	2	51	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTG.............................................................................................	20	13	9.69	126	0	114	0	0	2	0	3	7	0	0
...............................................GGCGACAGAAAGAAACGAGGAAG..................................................................................................................................................................................................................................	23	4	9.25	37	0	14	0	0	0	0	0	23	0	0
...............................................GGCGACAGAAAGAAACGAGGAAGC.................................................................................................................................................................................................................................	24	4	8.25	33	0	17	1	0	0	0	0	15	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGGAGC................................................................	26	5	7.20	36	0	27	4	0	2	0	0	3	0	0
................................................GCGACAGAAAGAAACGAGGAAG..................................................................................................................................................................................................................................	22	4	6.00	24	0	21	1	0	2	0	0	0	0	0
................................................GCGACAGAAAGAAACGAGGAAGCT................................................................................................................................................................................................................................	24	4	2.75	11	0	11	0	0	0	0	0	0	0	0
................................................GCGACAGAAAGAAACGAGGAAGCTGG..............................................................................................................................................................................................................................	26	4	2.50	10	0	9	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGGAG.................................................................	25	5	1.80	9	0	9	0	0	0	0	0	0	0	0
................................................GCGACAGAAAGAAACGAGGA....................................................................................................................................................................................................................................	20	4	1.75	7	0	6	0	0	1	0	0	0	0	0
...............................................GGCGACAGAAAGAAACGAGGAA...................................................................................................................................................................................................................................	22	4	1.75	7	0	2	0	0	0	0	0	5	0	0
.....................................................................................................................................................................................................................TCCTCGCCGCGGTCGGAGCAGAGG...........................................................	24	5	1.60	8	0	8	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................AATAGATGAG-CTGGTCCTGG............................................................................................	20	13	1.54	20	0	19	0	0	1	0	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCT..............................................................................................	19	13	1.46	19	0	16	0	0	3	0	0	0	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAGCAGA.............................................................	23	5	1.40	7	0	6	0	0	0	0	0	1	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAGCAGAG............................................................	24	5	1.40	7	0	7	0	0	0	0	0	0	0	0
................................................GCGACAGAAAGAAACGAGGAAGCTG...............................................................................................................................................................................................................................	25	4	1.25	5	0	5	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGGA..................................................................	24	5	1.20	6	0	6	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCCCTGCGAGAGGCCACCGCCAG--G....	24	11	1.09	12	0	10	2	0	0	0	0	0	0	0
...............................................GGCGACAGAAAGAAACGAGGAAA..................................................................................................................................................................................................................................	23	4	1.00	4	0	0	0	0	1	0	0	3	0	0
.................................................CGACAGAAAGAAACGAGGA....................................................................................................................................................................................................................................	19	4	1.00	4	0	4	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TTTCCTCGCCGCGGTCGGAGC................................................................	21	5	1.00	5	0	5	0	0	0	0	0	0	0	0
.................................................................................................................................................AAGATCGTTACAATCCCGTTTCT................................................................................................................................	23	10	1.00	10	0	10	0	0	0	0	0	0	0	0
....................................................................................TGACGGACGCAGC---CGGGAAATCAAT........................................................................................................................................................................................	25	8	0.88	7	0	0	0	0	0	0	0	7	0	0
.............................................................................................................................................................................TGCCCGGAGTAATAGATGAG-CTG...................................................................................................	23	14	0.86	12	0	12	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TGCCCGGAGTAATAGATGAG-CTGGT.................................................................................................	25	14	0.86	12	0	11	0	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................GCAGAGGTGACCTGTGCGGGA--CA.........................................	23	13	0.85	11	0	10	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................TCCTCGCCGCGGTCGGAGCAG..............................................................	21	5	0.80	4	0	4	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAGCAGAGG...........................................................	25	5	0.80	4	0	3	0	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................TCCTCGCCGCGGTCGGAG.................................................................	18	5	0.80	4	0	4	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TTTCCTCGCCGCGGTCGGAG.................................................................	20	5	0.80	4	0	4	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................AATAGATGAG-CTGGTCCTG.............................................................................................	19	13	0.77	10	0	10	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGAT.........................................................................................	24	13	0.77	10	0	4	0	0	0	0	0	6	0	0
.................................................CGACAGAAAGAAACGAGGAAGC.................................................................................................................................................................................................................................	22	4	0.75	3	0	3	0	0	0	0	0	0	0	0
................................................GCGACAGAAAGAAACGAGG.....................................................................................................................................................................................................................................	19	4	0.75	3	0	3	0	0	0	0	0	0	0	0
................................................GCGACAGAAAGAAACGAGGAA...................................................................................................................................................................................................................................	21	4	0.75	3	0	3	0	0	0	0	0	0	0	0
...............................................GGCGACAGAAAGAAACGAGGAAGA.................................................................................................................................................................................................................................	24	4	0.75	3	0	2	0	0	0	0	0	1	0	0
..........................................................................................................................................................................................................................................................................TCCCTGCGAGAGGCCACCGCCAG--.....	23	12	0.75	9	0	6	0	0	3	0	0	0	0	0
.............................................................................................................................................................................TGCCCGGAGTAATAGATGAG-CTGG..................................................................................................	24	14	0.71	10	0	9	0	0	1	0	0	0	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAGCAG..............................................................	22	5	0.60	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAGG...........................................................	21	5	0.60	3	0	2	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAGGTGAC.......................................................	25	5	0.60	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGGAGT................................................................	26	5	0.60	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGG...................................................................	23	5	0.60	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TTTCCTCGCCGCGGTCGGAGCAG..............................................................	23	5	0.60	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TTTCCTCGCCGCGGTCGGAGCA...............................................................	22	5	0.60	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAG............................................................	20	5	0.60	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TGCCCGGAGTAATAGATGAG-CTGGTC................................................................................................	26	14	0.57	8	0	4	0	0	1	0	0	3	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCC...............................................................................................	18	13	0.54	7	0	7	0	0	0	0	0	0	0	0
..............................................AGGCGACAGAAAGAAACGAGGA....................................................................................................................................................................................................................................	22	4	0.50	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTC.....................................................................	21	6	0.50	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCG....................................................................	22	6	0.50	3	0	3	0	0	0	0	0	0	0	0
.................................................................................................................................................AAGATCGTTACAATCCCGTTTC.................................................................................................................................	22	10	0.50	5	0	5	0	0	0	0	0	0	0	0
................................................GCGACAGAAAGAAACGAGGAAGA.................................................................................................................................................................................................................................	23	4	0.50	2	0	2	0	0	0	0	0	0	0	0
.................................................CGACAGAAAGAAACGAGGAAG..................................................................................................................................................................................................................................	21	4	0.50	2	0	2	0	0	0	0	0	0	0	0
..............................................AGGCGACAGAAAGAAACGAGGAAGC.................................................................................................................................................................................................................................	25	4	0.50	2	0	0	0	0	0	0	0	2	0	0
............................................................................................................................................................................................................................................GTGACCTGTGCGGGA--CACAGGG....................................	22	14	0.50	7	0	7	0	0	0	0	0	0	0	0
..............................................AGGCGACAGAAAGAAACGAGGAA...................................................................................................................................................................................................................................	23	4	0.50	2	0	0	0	0	0	0	0	2	0	0
......................................................................................................................................................................................................................................GCAGAGGTGACCTGTGCGGGA--C..........................................	22	13	0.46	6	0	6	0	0	0	0	0	0	0	0
.......................................................AAAGAAACGAGGAAGCTGG..............................................................................................................................................................................................................................	19	9	0.44	4	0	2	0	0	0	0	0	2	0	0
...........................................................................................................................................GGGGACAAGATCGTTACAATCC.......................................................................................................................................	22	12	0.42	5	0	2	3	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TCCTCGCCGCGGTCGGAGC................................................................	19	5	0.40	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................GGGATTTCCTCGCCGCGGTCGGAGC................................................................	25	5	0.40	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TTTCCTCGCCGCGGTCGGAGCAGA.............................................................	24	5	0.40	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAG.................................................................	19	5	0.40	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TCCTCGCCGCGGTCGGAGCAGA.............................................................	22	5	0.40	2	0	1	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGGAGA................................................................	26	5	0.40	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAGGT..........................................................	22	5	0.40	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................GGGATTTCCTCGCCGCGGTCGGAG.................................................................	24	5	0.40	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................GTGACCTGTGCGGGA--CACAGGGT...................................	23	14	0.36	5	0	5	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGT...........................................................................................	22	13	0.31	4	0	3	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................AATAGATGAG-CTGGTCCTGGG...........................................................................................	21	13	0.31	4	0	4	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGT..........................................................................................	23	13	0.31	4	0	1	0	0	1	0	0	2	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGA............................................................................................	21	13	0.31	4	0	2	0	0	0	0	0	2	0	0
......................................................................................................................................................................................................................................GCAGAGGTGACCTGTGCGG...............................................	19	17	0.29	5	0	5	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GCCCGGAGTAATAGATGAG-CTG...................................................................................................	22	14	0.29	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................CCCAGATCGAGGTGGAGTTGGC.................................................................................................................................................................	22	8	0.25	2	0	0	0	0	0	0	0	2	0	0
................................................GCGACAGAAAGAAACGAGGAAGCC................................................................................................................................................................................................................................	24	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................GGGGACAAGATCGTTACAATCCCG.....................................................................................................................................	24	12	0.25	3	0	3	0	0	0	0	0	0	0	0
...............................................GGCGACAGAAAGAAACGAGGA....................................................................................................................................................................................................................................	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................GGGGACAAGATCGTTACAATCCC......................................................................................................................................	23	12	0.25	3	0	2	0	0	1	0	0	0	0	0
.................................................CGACAGAAAGAAACGAGGAAGCT................................................................................................................................................................................................................................	23	4	0.25	1	0	1	0	0	0	0	0	0	0	0
................................................GCGACAGAAAGAAACGAG......................................................................................................................................................................................................................................	18	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...................................................ACAGAAAGAAACGAGGAAGCTGT..............................................................................................................................................................................................................................	23	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..............................................AGGCGACAGAAAGAAACGAGGAAG..................................................................................................................................................................................................................................	24	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..................................................GACAGAAAGAAACGAGGA....................................................................................................................................................................................................................................	18	4	0.25	1	0	1	0	0	0	0	0	0	0	0
....................................................CAGAAAGAAACGAGGAAGA.................................................................................................................................................................................................................................	19	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..................................................GACAGAAAGAAACGAGGAAGCTG...............................................................................................................................................................................................................................	23	4	0.25	1	0	1	0	0	0	0	0	0	0	0
................................................GCGACAGAAAGAAACGAGA.....................................................................................................................................................................................................................................	19	4	0.25	1	0	0	0	0	1	0	0	0	0	0
...............................................GGCGACAGAAAGAAACGAGGAAGCTG...............................................................................................................................................................................................................................	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..................................................GACAGAAAGAAACGAGGAAGC.................................................................................................................................................................................................................................	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.................................................CGACAGAAAGAAACGAGGAAGCTGG..............................................................................................................................................................................................................................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................GCAGAGGTGACCTGTGCGGG..............................................	20	17	0.24	4	0	4	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGATG........................................................................................	25	13	0.23	3	0	0	0	0	0	0	0	3	0	0
.......................................................................................................................................................................................................................................CAGAGGTGACCTGTGCGGGA--C..........................................	21	13	0.23	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................GCAGAGGTGACCTGTGCGGGA--...........................................	21	13	0.23	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................GCAGAGGTGACCTGTGCGGGA--CAC........................................	24	13	0.23	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................CGCGGTCGGAGCAGAGGTGACCTGTG..................................................	26	13	0.23	3	0	0	0	0	0	0	0	3	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTT.............................................................................................	20	13	0.23	3	0	3	0	0	0	0	0	0	0	0
.............................................................................GGCTGGCTGACGGACGCAGC---....................................................................................................................................................................................................	20	13	0.23	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................GTGACCTGTGCGGGA--CACAGG.....................................	21	14	0.21	3	0	3	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................GGGATTTCCTCGCCGCGGTCGGAGCA...............................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TTTCCTCGCCGCGGTCGGTA.................................................................	20	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................CGCCGCGGTCGGAGCAGAGGTGAC.......................................................	24	5	0.20	1	0	0	0	0	0	0	0	1	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAGGAA.........................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGGAGCAG..............................................................	28	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAGGTGACCT.....................................................	27	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAGA...........................................................	21	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GATTTCCTCGCCGCGGTCGG...................................................................	20	5	0.20	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGGAGCA...............................................................	27	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAGGTGAA.......................................................	25	5	0.20	1	0	0	0	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................TCCTCGCCGCGGTCGGAGCA...............................................................	20	5	0.20	1	0	0	0	0	1	0	0	0	0	0
...............................................................................................................................................................................................................GGGATTTCCTCGCCGCGGTCGG...................................................................	22	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TCCTCGCCGCGGTCGGAGCAA..............................................................	21	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................CGCCGCGGTCGGAGCAGAGGTGACC......................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGGAGCTT..............................................................	28	5	0.20	1	0	0	0	0	0	0	0	1	0	0
.........................................................................................................................................................................................................................CGCCGCGGTCGGAGCAGAGGTGACCTA....................................................	27	5	0.20	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCAA..............................................................................................	19	15	0.20	3	0	2	0	0	1	0	0	0	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAGCAGAA............................................................	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAGCA...............................................................	21	5	0.20	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAAT................................................................	20	5	0.20	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAGCAGAGAA..........................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................CGCCGCGGTCGGAGCAGAGGT..........................................................	21	5	0.20	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TTTCCTCGCCGCGGTCGGAGCAGAGG...........................................................	26	5	0.20	1	0	0	0	0	0	0	0	1	0	0
......................................................................................................................................................................................................................CCTCGCCGCGGTCGGAGCAGAG............................................................	22	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAG..............................................................	18	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TCCTCGCCGCGGTCGGAGCAGAG............................................................	23	5	0.20	1	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................CGCCGCGGTCGGAGCAGAGG...........................................................	20	5	0.20	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................CCCTGCGAGAGGCCACCGCCAG--G....	23	11	0.18	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................TGCGAGAGGCCACCGCCAG--G....	20	11	0.18	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................GGGGACAAGATCGTTACAATC........................................................................................................................................	21	12	0.17	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GCCGCGGTCGGAGCAGAG............................................................	18	6	0.17	1	0	0	0	0	0	0	0	1	0	0
..........................................................................................................................................................................................................................GCCGCGGTCGGAGCAGAGGTGAC.......................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................TGATCCCTGCGAGAGGCCACCGCCA........	25	12	0.17	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GCCGCGGTCGGAGCAGAGGTG.........................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................CCCTGCGAGAGGCCACCGCCAG--.....	22	12	0.17	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TGATGCCCGGAGTAATAGATGAG-C.....................................................................................................	24	13	0.15	2	0	1	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................GTAATAGATGAG-CTGGTCCTGGGA..........................................................................................	24	13	0.15	2	0	0	0	0	0	0	0	2	0	0
.......................................................................................................................................................................................AATAGATGAG-CTGGTCCTGGGA..........................................................................................	22	13	0.15	2	0	2	0	0	0	0	0	0	0	0
....................................................................................TGACGGACGCAGC---CGGGAAATC...........................................................................................................................................................................................	22	13	0.15	2	0	0	0	0	0	0	0	2	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGT............................................................................................	21	13	0.15	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................AATAGATGAG-CTGGTCCTGGGT..........................................................................................	22	13	0.15	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................ATAGATGAG-CTGGTCCTGG............................................................................................	19	13	0.15	2	0	0	1	0	1	0	0	0	0	0
............................................................................................................................................................................................................................CGCGGTCGGAGCAGAGGTGACCTGTGC.................................................	27	13	0.15	2	0	0	0	0	0	0	0	2	0	0
....................................................................................................................................................................................................................................................TGCGGGA--CACAGGGTTGTGATCCC..........................	24	14	0.14	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TGGGATGGGATTTCCTCGCCGCGGTTT....................................................................	27	7	0.14	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGG.......................................................................	19	7	0.14	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TGTGCGGGA--CACAGGGTTGTGATC............................	24	14	0.14	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TGGGATGGGATTTCCTCGCCGC.........................................................................	22	7	0.14	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................GGATGGGATTTCCTCGCCGCGG.......................................................................	22	7	0.14	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TGTGCGGGA--CACAGGGTTGTGAT.............................	23	14	0.14	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................GTGACCTGTGCGGGA--CACAGC.....................................	21	14	0.14	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................TGCGGGA--CACAGGGTTGTGATC............................	22	14	0.14	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................TGTGATCCCTGCGAGAGGCCACCGC..........	25	15	0.13	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................GAGGTGGAGTTGGCCTTCGGGGAA.......................................................................................................................................................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................CCCAGATCGAGGTGGAGTTGG..................................................................................................................................................................	21	8	0.13	1	0	1	0	0	0	0	0	0	0	0
....................................................................................TGACGGACGCAGC---CGGGAAATCAATAA......................................................................................................................................................................................	27	8	0.13	1	0	0	0	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................TCGGAGCAGAGGTGACCTGTGC.................................................	22	16	0.13	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................TCGGAGCAGAGGTGACCTGTGCG................................................	23	16	0.13	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................TGGAGTTGGCCTTCGGGGAC.......................................................................................................................................................	20	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................GTTGGCCTTCGGGGACAA.....................................................................................................................................................	18	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................TGTGATCCCTGCGAGAGGCCA..............	21	17	0.12	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................GATCCCTGCGAGAGGCCAC.............	19	17	0.12	2	0	2	0	0	0	0	0	0	0	0
......................................................GAAAGAAACGAGGAAGCTGG..............................................................................................................................................................................................................................	20	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................AGATCGTTACAATCCCGTTTCT................................................................................................................................	22	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................AAGATCGTTACAATCCCGTTT..................................................................................................................................	21	10	0.10	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................GATCGTTACAATCCCGTTTCT................................................................................................................................	21	10	0.10	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................CCTTCGGGGACAAGATCGTTACAATCC.......................................................................................................................................	27	11	0.09	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCCCTGCGAGAGGCCACCGCCAG--GT...	25	11	0.09	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................TGATCCCTGCGAGAGGCCACCGCCAG--G....	27	11	0.09	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................GCGAGAGGCCACCGCCAG--G....	19	11	0.09	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................GGGACAAGATCGTTACAATCC.......................................................................................................................................	21	12	0.08	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................GATCCCTGCGAGAGGCCACCGCCA........	24	12	0.08	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TTCGGGGACAAGATCGTTACAATCC.......................................................................................................................................	25	12	0.08	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................CGGAGCAGAGGTGACCTGTGCGGGA--CA.........................................	27	12	0.08	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................GGGACAAGATCGTTACAAT.........................................................................................................................................	19	12	0.08	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................CTTCGGGGACAAGATCGTTACAAT.........................................................................................................................................	24	12	0.08	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCCCTGCGAGAGGCCACCGCCA........	22	12	0.08	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................TGTGATCCCTGCGAGAGGCCACCGCCAG--.....	28	12	0.08	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................TGATCCCTGCGAGAGGCCACCGCCAG--.....	26	12	0.08	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TGATGCCCGGAGTAATAGATGAG-A.....................................................................................................	24	13	0.08	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGA...........................................................................................	22	13	0.08	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................ATAGATGAG-CTGGTCCTGGG...........................................................................................	20	13	0.08	1	0	1	0	0	0	0	0	0	0	0
....................................................................................TGACGGACGCAGC---CGGGAAA.............................................................................................................................................................................................	20	13	0.08	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGATT........................................................................................	25	13	0.08	1	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................ATAGATGAG-CTGGTCCTGGGA..........................................................................................	21	13	0.08	1	0	0	0	0	0	0	0	1	0	0
.......................................................................................................................................................................................AATAGATGAG-CTGGTCCTGGGATGG.......................................................................................	25	13	0.08	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................GATGCCCGGAGTAATAGATGAG-CT....................................................................................................	24	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................AATAGATGAG-CTGGTCCT..............................................................................................	18	13	0.08	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................AGATGAG-CTGGTCCTGGG...........................................................................................	18	13	0.08	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................GATGCCCGGAGTAATAGATGAG-CTG...................................................................................................	25	13	0.08	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGAA.........................................................................................	24	13	0.08	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................CGCGGTCGGAGCAGAGGTGACC......................................................	22	13	0.08	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................GCAGAGGTGACCTGTGCGGGA--A..........................................	22	13	0.08	1	0	1	0	0	0	0	0	0	0	0
............................................................................CGGCTGGCTGACGGACGCAGT---AA..................................................................................................................................................................................................	23	13	0.08	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................GCAGAGGTGACCTGTGCGGGA--CACAGC.....................................	27	13	0.08	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................AGATGAG-CTGGTCCTGGGAT.........................................................................................	20	13	0.08	1	0	1	0	0	0	0	0	0	0	0
....................................................................................TGACGGACGCAGC---CGGGAAATCAA.........................................................................................................................................................................................	24	13	0.08	1	0	0	0	0	0	0	0	1	0	0
..........................................................................................................................................................................................................................................AGGTGACCTGTGCGGGA--CACA.......................................	21	13	0.08	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................AGATGAG-CTGGTCCTGGGATGG.......................................................................................	22	13	0.08	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................GCAGAGGTGACCTGTGCGGGA--CACAG......................................	26	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................GTAATAGATGAG-CTGGTCCTGGG...........................................................................................	23	13	0.08	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................CGCGGTCGGAGCAGAGGTGA........................................................	20	13	0.08	1	0	0	0	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................................TGTGATCCCTGCGAGAGGCCACCGCC.........	26	13	0.08	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGATGG.......................................................................................	26	13	0.08	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATGCCCGGAGTAATAGATGAG-CTGG..................................................................................................	25	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................GACGGACGCAGC---CGGGAAA.............................................................................................................................................................................................	19	13	0.08	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................CGCGGTCGGAGCAGAGGTGAC.......................................................	21	13	0.08	1	0	0	0	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................................CAGAGGTGACCTGTGCGGGA--...........................................	20	13	0.08	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................GTGACCTGTGCGGGA--CACA.......................................	19	14	0.07	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GCCCGGAGTAATAGATGAG-CTGG..................................................................................................	23	14	0.07	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TGTGCGGGA--CACAGGGTTG.................................	19	14	0.07	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................CGGTCGGAGCAGAGGTGACCTGT...................................................	23	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................TGACCTGTGCGGGA--CACAGGGTTGTG...............................	26	14	0.07	1	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................TGCCCGGAGTAATAGATGAG-C.....................................................................................................	21	14	0.07	1	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................CGGAGTAATAGATGAG-CTGGT.................................................................................................	21	14	0.07	1	0	1	0	0	0	0	0	0	0	0

droPer2

GCGAGTAGA------------------------CTGGGGGAA-GAGAGGCGACAGAAAGAAACGAGGAAGCTGGTGCGGCTGGCTGACGGACGCAGC---CGGGAAATCAATTCCCAGATCGAGGTGGAGTTGGCCTTCGGGGACAAGATCGTTACAATCCCGTTTCTCGTGATGCCCGGAGTAATAGATGAG-CTGGTCCTGGGATGGGATTTCCTCGCCGCGGTCGGAGCAGAGGTGACCTGTGCGGGA--CACAGGGTTGTGATCCCTGCGAGAGGCCACCGCCAG--GGGCG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGG............................................................................................	21	20	0.80	16	1	15	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGA..........................................................................................	23	20	0.55	11	1	8	2	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGG...........................................................................................	22	20	0.35	7	0	7	0	0	0	0
................................................GCGACAGAAAGAAACGAGGAAGCTG...............................................................................................................................................................................................................................	25	9	0.22	2	0	2	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTG.............................................................................................	20	20	0.20	4	0	4	0	0	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAGCAGA.............................................................	23	20	0.15	3	1	0	2	0	0	0
.............................................................................................................................................................................TGCCCGGAGTAATAGATGAG-CTGG..................................................................................................	24	20	0.15	3	0	2	0	0	0	1
............................................................................................................................................................................................................................................GTGACCTGTGCGGGA--CACAGGGTTG.................................	25	20	0.15	3	0	3	0	0	0	0
............................................................................................................................................................................................................................................GTGACCTGTGCGGGA--CACAGGG....................................	22	20	0.15	3	0	3	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGAT.........................................................................................	24	20	0.15	3	0	1	0	0	0	2
................................................GCGACAGAAAGAAACGAGGAAGCT................................................................................................................................................................................................................................	24	9	0.11	1	0	0	0	0	0	1
................................................GCGACAGAAAGAAACGAGGAAG..................................................................................................................................................................................................................................	22	9	0.11	1	0	0	0	0	0	1
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAGG...........................................................	21	20	0.10	2	0	2	0	0	0	0
...................................................................................................................................................................................................................TTTCCTCGCCGCGGTCGGAGCA...............................................................	22	20	0.10	2	0	2	0	0	0	0
....................................................................................................................................................................................................................................................TGCGGGA--CACAGGGTTGTGAT.............................	21	20	0.10	2	0	1	1	0	0	0
.........................................................................................................................................................................................................................CGCCGCGGTCGGAGCAGAG............................................................	19	20	0.10	2	0	2	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCT..............................................................................................	19	20	0.10	2	1	1	0	0	0	0
.............................................................................................................................................................................TGCCCGGAGTAATAGATGAG-CTGGT.................................................................................................	25	20	0.10	2	1	1	0	0	0	0
....................................................................................................................................................ATCGTTACAATCCCGTTTCTCGTG............................................................................................................................	24	13	0.08	1	0	1	0	0	0	0
...................................................................................................................................................GATCGTTACAATCCCGTTTCTCGT.............................................................................................................................	24	13	0.08	1	0	1	0	0	0	0
........................................................................................................................................................................................................CTGGGATGGGATTTCCTCGTT...........................................................................	21	19	0.05	1	0	0	1	0	0	0
..........................................................................................................................................................................................................................GCCGCGGTCGGAGCAGAGGTGAAA......................................................	24	20	0.05	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................TGCGGGA--CACAGGGTTGTGATA............................	22	20	0.05	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................TGCGGGA--CACAGGGTTGTGATCCCTTA.......................	27	20	0.05	1	0	1	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGAA.........................................................................................	24	20	0.05	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................AGGTGACCTGTGCGGGA--CAC........................................	20	20	0.05	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................TCCTCGCCGCGGTCGGAGT................................................................	19	20	0.05	1	0	1	0	0	0	0
....................................................................................................CGGGAAATCAATTCCCAGATCGAGGTG.........................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAG..............................................................	18	20	0.05	1	0	1	0	0	0	0
.........................................................................................................................................................................................TAGATGAG-CTGGTCCTGGGATGGGATT...................................................................................	27	20	0.05	1	0	0	0	0	0	1
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAGGTGA........................................................	24	20	0.05	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................TGCGGGA--CACAGGGTTGTGATCC...........................	23	20	0.05	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................TCCCTGCGAGAGGCCACCGCCAG--.....	23	20	0.05	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................TGTGATCCCTGCGAGAGGC................	19	20	0.05	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................TGTGCGGGA--CACAGGGTTGTG...............................	21	20	0.05	1	0	0	0	0	0	1
...................................................................................................................................................................................................................TTTCCTCGCCGCGGTCGGAG.................................................................	20	20	0.05	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................CGCCGCGGTCGGAGCAGAGGTGA........................................................	23	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................................................GCCCGGAGTAATAGATGAG-CTGG..................................................................................................	23	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGGAG.................................................................	25	20	0.05	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................TCCCTGCGAGAGGCCACCGCCAG--GG...	25	20	0.05	1	0	1	0	0	0	0
.....TAGA------------------------CTGGGGGAA-GAGAGGCG.....................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0
....................................................................................TGACGGACGCAGC---CGGGAAATCAAT........................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
........................................................................................................................................................................................................................TCGCCGCGGTCGGAGCAGAGGC..........................................................	22	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGGAGC................................................................	26	20	0.05	1	0	0	1	0	0	0
....................................................................................................................................................................................................................................................TGCGGGA--CACAGGGTTGTGATT............................	22	20	0.05	1	0	0	1	0	0	0
...................................................................................................................................................................................................................TTTCCTCGCCGCGGTCGGAGCAG..............................................................	23	20	0.05	1	0	1	0	0	0	0
....................................................................................TGACGGACGCAGC---CGGGA...............................................................................................................................................................................................	18	20	0.05	1	1	0	0	0	0	0
....................................................................................................CGGGAAATCAATTCCCAGATCGAG............................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................CGAGAGGCCACCGCCAG--GGA..	20	20	0.05	1	0	0	0	0	0	1
.......................................................................TGGTGCGGCTGGCTGACGGACGCAG........................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................CGCCGCGGTCGGAGCAGAGT...........................................................	20	20	0.05	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................TTGTGATCCCTGCGAGAGGC................	20	20	0.05	1	0	0	1	0	0	0
.....................................................................................................................................................................................................................TCCTCGCCGCGGTCGGAGCAG..............................................................	21	20	0.05	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................GTGCGGGA--CACAGGGTTGTGATC............................	23	20	0.05	1	0	1	0	0	0	0
...AGTAGA------------------------CTGGGGGAA-GAGAG........................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0
.......................................................................................................GAAATCAATTCCCAGATCGAGGTGGAG......................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................CGCCGCGGTCGGAGCAGAGG...........................................................	20	20	0.05	1	0	1	0	0	0	0
......................................................................................................................................................................................TAATAGATGAG-CTGGTCCTGGGATGG.......................................................................................	26	20	0.05	1	0	0	0	0	0	1
....................................................................................................CGGGAAATCAATTCCCAGATCGA.............................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCCTCGCCGCGGTCGG...................................................................	23	20	0.05	1	0	1	0	0	0	0
....................................................................................................................................................................................................................TTCCTCGCCGCGGTCGGAGCAG..............................................................	22	20	0.05	1	0	1	0	0	0	0

droWil2

ATGAGCCGACAGATGG---------CGGAAAATCTGAGAAAC-AAAGGAGACCGAGAGACCACAAACAAGCAAGTATACATGGCAGACGGGAAGATC---AGAAATATCAACGAGCAGTGGACAGGATACGTTCGATTCGGAAACAAAGAAATGAACATAACATTTCTCATCATGCCAGACGGAATAGATGCC-TTAATATTAGGATGGAATTTCTTAAGGCTAATGGACACCGAAATAGCATGCGGAGGC--CACAGGATAAAAATTCCAACGA-----------CAA--AAAGG	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..............................................................................................................................................................................GCCAGACGGAATAGATGCC-TTAATAT...............................................................................................	26	3	6.33	19	0	4	2	13	0
.................................CTGAGAAAC-AAAGGAGACCGAGA...............................................................................................................................................................................................................................................	23	5	1.60	8	0	8	0	0	0
..............................................................................................................................................................................GCCAGACGGAATAGATGCC-TTAATA................................................................................................	25	3	1.00	3	0	2	0	1	0
..............................................................................................................................................................................GCCAGACGGAATAGATGCC-TTAAT.................................................................................................	24	18	0.83	15	1	6	0	8	0
........................................................................................................................................................................................................................................................GGC--CACAGGATAAAAATTCCAACGA-----------CA........	27	3	0.67	2	0	2	0	0	0
.............................................................................................................................................................................TGCCAGACGGAATAGATGCC-TTAATAT...............................................................................................	27	3	0.67	2	0	0	0	2	0
.................................CTGAGAAAC-AAAGGAGACCGAGAG..............................................................................................................................................................................................................................................	24	5	0.60	3	0	3	0	0	0
..................................TGAGAAAC-AAAGGAGACCGAGAGA.............................................................................................................................................................................................................................................	24	5	0.60	3	0	3	0	0	0
.................................................................................................................................................................................AGACGGAATAGATGCC-TTAATATTAGGA..........................................................................................	28	4	0.50	2	0	2	0	0	0
.....................................................................................................................................................................................................................................CACCGAAATAGCATGCGGAGGC--...........................................	22	20	0.45	9	0	6	0	3	0
.................................................................................................................................................................................................................AATTTCTTAAGGCTAATGGACACCGAA............................................................	27	7	0.43	3	0	3	0	0	0
......................................................................CAAGTATACATGGCAGACGGGAAGA.........................................................................................................................................................................................................	25	12	0.42	5	0	2	0	3	0
..................................TGAGAAAC-AAAGGAGACCGAGAG..............................................................................................................................................................................................................................................	23	5	0.40	2	0	2	0	0	0
..................................TGAGAAAC-AAAGGAGACCGAGAC..............................................................................................................................................................................................................................................	23	5	0.40	2	0	2	0	0	0
..................................TGAGAAAC-AAAGGAGACCGAGA...............................................................................................................................................................................................................................................	22	5	0.40	2	0	2	0	0	0
.................................CTGAGAAAC-AAAGGAGACCGA.................................................................................................................................................................................................................................................	21	5	0.40	2	0	1	1	0	0
.................................CTGAGAAAC-AAAGGAGACCGAG................................................................................................................................................................................................................................................	22	5	0.40	2	0	2	0	0	0
................................................................................................................................................................................................................................................................AGGATAAAAATTCCAACGA-----------CAA--AAAGG	27	3	0.33	1	0	0	0	1	0
...............................................................................................................................................................................................................................................................CAGGATAAAAATTCCAACGA-----------CAA--AAA..	26	3	0.33	1	0	1	0	0	0
......................................................................CAAGTATACATGGCAGACGGGAAG..........................................................................................................................................................................................................	24	16	0.31	5	0	4	0	1	0
....................................................................AGCAAGTATACATGGCAGACGGGAAGA.........................................................................................................................................................................................................	27	10	0.30	3	0	1	1	1	0
........................................................................................................................................................................................................................................CGAAATAGCATGCGGAGGC--CACAGGA....................................	26	20	0.30	6	0	6	0	0	0
................................................................................................................................................................................................................GAATTTCTTAAGGCTAATGGACACCG..............................................................	26	7	0.29	2	0	1	0	1	0
................................................................................................................................................................................................................GAATTTCTTAAGGCTAATGGACACC...............................................................	25	7	0.29	2	0	2	0	0	0
................................................................................................................................................................................................................GAATTTCTTAAGGCTAATGGACA.................................................................	23	7	0.29	2	0	2	0	0	0
.........................................................................................................................................................................................................TAGGATGGAATTTCTTAAGGCTAATGG....................................................................	27	7	0.29	2	0	1	0	1	0
...................................GAGAAAC-AAAGGAGACCGAGAC..............................................................................................................................................................................................................................................	22	7	0.29	2	0	2	0	0	0
................................................................................................................................................................................................................GAATTTCTTAAGGCTAATGGACAC................................................................	24	7	0.29	2	0	2	0	0	0
..........................................................................................................................................................................TCATGCCAGACGGAATAGATGCC-T.....................................................................................................	24	18	0.28	5	0	1	0	4	0
...........................................................................................................TCAACGAGCAGTGGACAGGATACGT....................................................................................................................................................................	25	20	0.25	5	0	4	0	1	0
.........................................................................................................................................TCGGAAACAAAGAAATGAACATAACA.....................................................................................................................................	26	20	0.25	5	0	5	0	0	0
...................................................................................................................................................................................ACGGAATAGATGCC-TTAATATTA.............................................................................................	23	4	0.25	1	0	1	0	0	0
.................................................................................................................................................................................AGACGGAATAGATGCC-TTAATATT..............................................................................................	24	4	0.25	1	0	1	0	0	0
...................................................................................................................................................................................ACGGAATAGATGCC-TTAATATTAG............................................................................................	24	4	0.25	1	0	1	0	0	0
.................................................................................................................................................................................AGACGGAATAGATGCC-TTAATATTAGG...........................................................................................	27	4	0.25	1	0	1	0	0	0
...........................................................................................................TCAACGAGCAGTGGACAGGATACG.....................................................................................................................................................................	24	20	0.25	5	0	5	0	0	0
........................................................................................................................................................................................ATAGATGCC-TTAATATTAGGATGGAAT....................................................................................	27	4	0.25	1	0	0	0	1	0
...................................................................................................................................................................................ACGGAATAGATGCC-TTAATATTAGG...........................................................................................	25	4	0.25	1	0	1	0	0	0
...................................................................................CAGACGGGAAGATC---AGAAATATC...........................................................................................................................................................................................	23	9	0.22	2	0	1	0	1	0
....................................................................AGCAAGTATACATGGCAGACGGGA............................................................................................................................................................................................................	24	15	0.20	3	0	2	0	1	0
...............................ATCTGAGAAAC-AAAGGAGACCGAGA...............................................................................................................................................................................................................................................	25	5	0.20	1	0	1	0	0	0
........................................................................................................................................................................................................................................CGAAATAGCATGCGGAGGC--CAC........................................	22	20	0.20	4	0	4	0	0	0
.................................CTGAGAAAC-AAAGGAGACCGAGAC..............................................................................................................................................................................................................................................	24	5	0.20	1	0	1	0	0	0
...........................................................................................AAGATC---AGAAATATCAACGAGCAGTG................................................................................................................................................................................	26	10	0.20	2	0	2	0	0	0
..................................TGAGAAAC-AAAGGAGACCGAGAGAC............................................................................................................................................................................................................................................	25	5	0.20	1	0	1	0	0	0
..............................AATCTGAGAAAC-AAAGGAGACCGA.................................................................................................................................................................................................................................................	24	5	0.20	1	0	1	0	0	0
...........GATGG---------CGGAAAATCTGAGAAAC-AAAG.........................................................................................................................................................................................................................................................	26	5	0.20	1	0	0	0	1	0
..........................GGAAAATCTGAGAAAC-AAAGGAG......................................................................................................................................................................................................................................................	23	5	0.20	1	0	0	0	1	0
...........................................................................................AAGATC---AGAAATATCAACGAGCAG..................................................................................................................................................................................	24	10	0.20	2	0	2	0	0	0
...........................................................................................AAGATC---AGAAATATCAACGAGCAA..................................................................................................................................................................................	24	10	0.20	2	0	2	0	0	0
................................TCTGAGAAAC-AAAGGAGACCGAG................................................................................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0
.....................................................................................................................................................................................................................................CACCGAAATAGCATGCGGAGGC--C..........................................	23	20	0.20	4	0	4	0	0	0
................................TCTGAGAAAC-AAAGGAGACCGAGC...............................................................................................................................................................................................................................................	24	5	0.20	1	1	0	0	0	0
..............................................................................................ATC---AGAAATATCAACGAGCAGTGGACA............................................................................................................................................................................	27	11	0.18	2	0	1	0	1	0
.......................................................................AAGTATACATGGCAGACGGGAAGA.........................................................................................................................................................................................................	24	12	0.17	2	0	1	0	1	0
...........................................................................................................................................................................................................................GGCTAATGGACACCGAAATAGCATGCGG.................................................	28	6	0.17	1	0	1	0	0	0
..................................................................................................................................................................................................................................GGACACCGAAATAGCATGCGGAGGC--C..........................................	26	6	0.17	1	0	0	0	1	0
...................................................................................................................................................................................................................................GACACCGAAATAGCATGCGGA................................................	21	6	0.17	1	0	1	0	0	0
.................................................................................................................................................................................................................................TGGACACCGAAATAGCATGCGGAG...............................................	24	6	0.17	1	0	1	0	0	0
..................................................................................................................................................................................................................................GGACACCGAAATAGCATGCGGAG...............................................	23	6	0.17	1	0	1	0	0	0
...................................................................................................................................................................................................................................GACACCGAAATAGCATGCGGAGGC--CA.........................................	26	6	0.17	1	0	1	0	0	0
..............................................................................................................................................................................GCCAGACGGAATAGATGCC-TTAA..................................................................................................	23	18	0.17	3	0	3	0	0	0
...............................................................................................................................................................................................................................AATGGACACCGAAATAGCATGCGGAG...............................................	26	6	0.17	1	0	1	0	0	0
..............................................................................................................................................................................GCCAGACGGAATAGATGCC-TTA...................................................................................................	22	18	0.17	3	0	3	0	0	0
..........................................................................................................................................................................TCATGCCAGACGGAATAGATGCC-......................................................................................................	23	19	0.16	3	0	2	0	1	0
................................................................................................................................................................ACATTTCTCATCATGCCAGACGG.................................................................................................................	23	20	0.15	3	0	3	0	0	0
..............................................................................................................................................................................................................................................AGCATGCGGAGGC--CACAGGATAA.................................	23	20	0.15	3	0	2	0	1	0
.....................................................................................................................................................................................................................................CACCGAAATAGCATGCGGAGG..............................................	21	20	0.15	3	0	3	0	0	0
..............................................................................................................................................................................................................................................AGCATGCGGAGGC--CACAGGATA..................................	22	20	0.15	3	0	3	0	0	0
.....................................................................................................................................................................TCTCATCATGCCAGACGGAATAGA...........................................................................................................	24	20	0.15	3	0	1	0	2	0
......................................................................................................................................GATTCGGAAACAAAGAAATGAACA..........................................................................................................................................	24	20	0.15	3	0	3	0	0	0
....................................................................................................................................TCGATTCGGAAACAAAGAAATGAACA..........................................................................................................................................	26	20	0.15	3	0	3	0	0	0
.....................................................................................................................................................................................................................................CACCGAAATAGCATGCGGAGGC--CA.........................................	24	20	0.15	3	0	3	0	0	0
........................................................................................................................................................................................................TTAGGATGGAATTTCTTAAGGCTAATG.....................................................................	27	7	0.14	1	0	1	0	0	0
..............................................................................................................................................................................................................TGGAATTTCTTAAGGCTAATGGACAC................................................................	26	7	0.14	1	0	1	0	0	0
.................................................................................................................................................................................................................AATTTCTTAAGGCTAATGGACACC...............................................................	24	7	0.14	1	0	1	0	0	0
...................................GAGAAAC-AAAGGAGACCGAGAGACCACA........................................................................................................................................................................................................................................	28	7	0.14	1	0	1	0	0	0
............................................................................................................................................................................................ATGCC-TTAATATTAGGATG........................................................................................	19	7	0.14	1	0	1	0	0	0
..........................................................................................................................................................................................AGATGCC-TTAATATTAGGATGGAATT...................................................................................	26	7	0.14	1	0	1	0	0	0
.................................................................................................................................................................................................................AATTTCTTAAGGCTAATGGACACCGAAA...........................................................	28	7	0.14	1	1	0	0	0	0
....................................................................AGCAAGTATACATGGCAGACGGGAAG..........................................................................................................................................................................................................	26	14	0.14	2	0	2	0	0	0
..................................................................CAAGCAAGTATACATGGCAGACGGG.............................................................................................................................................................................................................	25	14	0.14	2	0	1	0	1	0
..................................................................CAAGCAAGTATACATGGCAGACGG..............................................................................................................................................................................................................	24	14	0.14	2	0	2	0	0	0
...................................GAGAAAC-AAAGGAGACCGAGAGAC............................................................................................................................................................................................................................................	24	7	0.14	1	0	1	0	0	0
.................................................................................................................................................................................................................AATTTCTTAAGGCTAATGGACAC................................................................	23	7	0.14	1	0	1	0	0	0
...................................GAGAAAC-AAAGGAGACCGAGAGA.............................................................................................................................................................................................................................................	23	7	0.14	1	0	1	0	0	0
...................................GAGAAAC-AAAGGAGACCGAGAGACCAC.........................................................................................................................................................................................................................................	27	7	0.14	1	0	1	0	0	0
.............................................................................................................................................................................................................ATGGAATTTCTTAAGGCTAATGGACA.................................................................	26	7	0.14	1	0	1	0	0	0
.................................................................................................................................................................................................................AATTTCTTAAGGCTAATGGACA.................................................................	22	7	0.14	1	0	1	0	0	0
..............................................................................................................................................................................................................TGGAATTTCTTAAGGCTAATGGACA.................................................................	25	7	0.14	1	0	1	0	0	0
..........................................................................................................................................................................................................................AGGCTAATGGACACCGAAATAGCA......................................................	24	7	0.14	1	0	1	0	0	0
................................................................................................................................................................................................................GAATTTCTTAAGGCTAATGGA...................................................................	21	7	0.14	1	0	1	0	0	0
.............................................................................................................................................................................................................ATGGAATTTCTTAAGGCTAATGG....................................................................	23	7	0.14	1	0	1	0	0	0
................................................................................................................................................................................................................GAATTTCTTAAGGCTAATG.....................................................................	19	7	0.14	1	0	1	0	0	0
..................................................................................................................................................................................................................ATTTCTTAAGGCTAATGGACACCGAAA...........................................................	27	7	0.14	1	0	1	0	0	0
.....................................................................................................GAAATATCAACGAGCAGTGGACAGGA.........................................................................................................................................................................	26	15	0.13	2	0	1	0	1	0
....................................................................AGCAAGTATACATGGCAG..................................................................................................................................................................................................................	18	15	0.13	2	0	2	0	0	0
....................................................................AGCAAGTATACATGGCAGACGGG.............................................................................................................................................................................................................	23	15	0.13	2	0	2	0	0	0
....................................................................AGCAAGTATACATGGCAGACGG..............................................................................................................................................................................................................	22	15	0.13	2	0	1	0	1	0
....................................................CGAGAGACCACAAACAAGCAAGTAT...........................................................................................................................................................................................................................	25	8	0.13	1	0	0	0	1	0
.................................................GACCGAGAGACCACAAACAAGCAAGT.............................................................................................................................................................................................................................	26	8	0.13	1	0	0	0	1	0
.........................................C-AAAGGAGACCGAGAGACCACAA.......................................................................................................................................................................................................................................	23	8	0.13	1	0	1	0	0	0
......................................................................CAAGTATACATGGCAGACGGGA............................................................................................................................................................................................................	22	17	0.12	2	0	2	0	0	0
......................................................................CAAGTATACATGGCAGACGGGAA...........................................................................................................................................................................................................	23	17	0.12	2	0	2	0	0	0
..............................................................CAAACAAGCAAGTATACATGGCAG..................................................................................................................................................................................................................	24	9	0.11	1	0	1	0	0	0
..................................................................................GCAGACGGGAAGATC---AGAAATAT............................................................................................................................................................................................	23	9	0.11	1	0	1	0	0	0
............................................................CACAAACAAGCAAGTATACATGGCAGA.................................................................................................................................................................................................................	27	9	0.11	1	0	1	0	0	0
..............................................................CAAACAAGCAAGTATACATGGCAGAC................................................................................................................................................................................................................	26	9	0.11	1	0	1	0	0	0
..............................................................CAAACAAGCAAGTATACATGGCAGACGG..............................................................................................................................................................................................................	28	9	0.11	1	0	1	0	0	0
..............................................................CAAACAAGCAAGTATACATGGCAGACG...............................................................................................................................................................................................................	27	9	0.11	1	0	1	0	0	0
..............................................................................................................................................................................GCCAGACGGAATAGATGCC-TT....................................................................................................	21	18	0.11	2	0	2	0	0	0
..................................................................................GCAGACGGGAAGATC---AGAAATATCAACG.......................................................................................................................................................................................	28	9	0.11	1	0	1	0	0	0
..................................................................................GCAGACGGGAAGATC---AGAAATA.............................................................................................................................................................................................	22	9	0.11	1	0	1	0	0	0
..............................................................CAAACAAGCAAGTATACATGG.....................................................................................................................................................................................................................	21	9	0.11	1	0	1	0	0	0
...................................................................................CAGACGGGAAGATC---AGAAATATCAAC........................................................................................................................................................................................	26	9	0.11	1	0	1	0	0	0
...................................................................................CAGACGGGAAGATC---AGAAATATCAACG.......................................................................................................................................................................................	27	9	0.11	1	0	1	0	0	0
..................................................................................GCAGACGGGAAGATC---AGAAATATC...........................................................................................................................................................................................	24	9	0.11	1	0	1	0	0	0
....................................AGAAAC-AAAGGAGACCGAGAG..............................................................................................................................................................................................................................................	21	9	0.11	1	0	1	0	0	0
.......................................................GAGACCACAAACAAGCAAGTATACATGG.....................................................................................................................................................................................................................	28	9	0.11	1	0	1	0	0	0
..............................................................................................................................................................................GCCAGACGGAATAGATGCC-......................................................................................................	19	19	0.11	2	0	2	0	0	0
........................................................................................GGGAAGATC---AGAAATATCAACGAGCAG..................................................................................................................................................................................	27	10	0.10	1	0	1	0	0	0
..............................................................................................................................................................................................................................................AGCATGCGGAGGC--CACAGGATAAAAAT.............................	27	20	0.10	2	0	2	0	0	0
.........................................................................................................TATCAACGAGCAGTGGACAGG..........................................................................................................................................................................	21	20	0.10	2	0	1	0	1	0
.................................................................................GGCAGACGGGAAGATC---AGA.................................................................................................................................................................................................	19	10	0.10	1	0	1	0	0	0
.............................................................................................................................................................................................................................................TAGCATGCGGAGGC--CACAGGATAAA................................	25	20	0.10	2	0	0	0	2	0
.....................................................................GCAAGTATACATGGCAGACGGGAAGA.........................................................................................................................................................................................................	26	10	0.10	1	0	0	0	1	0
...........................................................................................................TCAACGAGCAGTGGACAGGATACGTT...................................................................................................................................................................	26	20	0.10	2	0	1	0	1	0
.....................................................................................GACGGGAAGATC---AGAAATATCAACG.......................................................................................................................................................................................	25	10	0.10	1	0	1	0	0	0
.......................................................................................CGGGAAGATC---AGAAATATCAACGA......................................................................................................................................................................................	24	10	0.10	1	0	1	0	0	0
........................................................................................GGGAAGATC---AGAAATATCAACGA......................................................................................................................................................................................	23	10	0.10	1	0	1	0	0	0
....................................................................................................................................TCGATTCGGAAACAAAGAAATGAAC...........................................................................................................................................	25	20	0.10	2	0	2	0	0	0
....................................................................................................................................................................................................................................ACACCGAAATAGCATGCGGAGGC--CAC........................................	26	20	0.10	2	0	2	0	0	0
........................................................................................................................................................................................................................................CGAAATAGCATGCGGAGGC--CACAGG.....................................	25	20	0.10	2	0	0	0	2	0
.....................................................................................................................................................................................................................................CACCGAAATAGCATGCGGAGGC--CAC........................................	25	20	0.10	2	0	2	0	0	0
.....................................................................................GACGGGAAGATC---AGAAATATC...........................................................................................................................................................................................	21	10	0.10	1	0	0	0	0	1
....................................................................................................................................................................TTCTCATCATGCCAGACGGAATAGA...........................................................................................................	25	20	0.10	2	0	2	0	0	0
..........................................................................................GAAGATC---AGAAATATCAACGAGCAG..................................................................................................................................................................................	25	10	0.10	1	0	1	0	0	0
.....................................................................................GACGGGAAGATC---AGAAATATCAACGA......................................................................................................................................................................................	26	10	0.10	1	0	1	0	0	0
.........................................................................................................................................................................................................TAGGATGGAATTTCTTAAGGC..........................................................................	21	20	0.10	2	0	2	0	0	0
.........................................................................................................................................................GAACATAACATTTCTCATCATGCCAG.....................................................................................................................	26	20	0.10	2	0	2	0	0	0
..............................................................................................ATC---AGAAATATCAACGAGCAGTGGA..............................................................................................................................................................................	25	11	0.09	1	0	1	0	0	0
..............................................................................................ATC---AGAAATATCAACGAGCAGTGG...............................................................................................................................................................................	24	11	0.09	1	0	1	0	0	0
..............................................................................................ATC---AGAAATATCAACGAGCAG..................................................................................................................................................................................	21	11	0.09	1	0	1	0	0	0
..............................................................................................ATC---AGAAATATCAACGAGCAGTGGACAG...........................................................................................................................................................................	28	11	0.09	1	0	0	0	1	0
..........................................................................TATACATGGCAGACGGGAAGATC---AT..................................................................................................................................................................................................	25	12	0.08	1	0	0	0	1	0
.......................................................................AAGTATACATGGCAGACGGGAAGAT........................................................................................................................................................................................................	25	12	0.08	1	0	1	0	0	0
..........................................................................TATACATGGCAGACGGGAAGA.........................................................................................................................................................................................................	21	13	0.08	1	0	1	0	0	0
..........................................................................TATACATGGCAGACGGGAAGAT........................................................................................................................................................................................................	22	13	0.08	1	0	0	0	1	0
......................................................................CAAGTATACATGGCAGACGGGAAGATT---....................................................................................................................................................................................................	27	13	0.08	1	0	0	1	0	0
..................................................................CAAGCAAGTATACATGGCAGACGGGA............................................................................................................................................................................................................	26	14	0.07	1	0	0	0	1	0
....................................................................AGCAAGTATACATGGCAGACGGGAA...........................................................................................................................................................................................................	25	15	0.07	1	0	1	0	0	0
....................................................................................................AGAAATATCAACGAGCAGTGGACAGGA.........................................................................................................................................................................	27	15	0.07	1	0	1	0	0	0
.....................................................................GCAAGTATACATGGCAGACGGGAA...........................................................................................................................................................................................................	24	15	0.07	1	0	1	0	0	0
.....................................................................GCAAGTATACATGGCAGACGG..............................................................................................................................................................................................................	21	15	0.07	1	0	0	0	1	0
....................................................................................................AGAAATATCAACGAGCAGTGGAC.............................................................................................................................................................................	23	15	0.07	1	0	1	0	0	0
.....................................................................................................GAAATATCAACGAGCAGTGGACAGGAA........................................................................................................................................................................	27	16	0.06	1	0	0	0	1	0
......................................................................CAAGTATACATGGCAGACGG..............................................................................................................................................................................................................	20	17	0.06	1	0	0	0	1	0
......................................................................CAAGTATACATGGCAGACGT..............................................................................................................................................................................................................	20	17	0.06	1	0	1	0	0	0
......................................................................CAAGTATACATGGCAGACGGG.............................................................................................................................................................................................................	21	17	0.06	1	0	1	0	0	0
........................................................................................................................................................................CATCATGCCAGACGGAATAGATGCC-T.....................................................................................................	26	18	0.06	1	0	0	0	1	0
.......................................................................................................................................................................TCATCATGCCAGACGGAATAGATGCC-T.....................................................................................................	27	18	0.06	1	0	1	0	0	0
.............................................................................................................................................................................TGCCAGACGGAATAGATGCC-TTAAT.................................................................................................	25	18	0.06	1	0	0	0	1	0
...............................................................................................................................................................................CCAGACGGAATAGATGCC-TTA...................................................................................................	21	18	0.06	1	0	1	0	0	0
...............................................................................................................................................................................CCAGACGGAATAGATGCC-TTAAT.................................................................................................	23	18	0.06	1	0	1	0	0	0
........................................................................................................................................................................CATCATGCCAGACGGAATAGATGCC-......................................................................................................	25	19	0.05	1	0	1	0	0	0
................................................................................................................................................................................CAGACGGAATAGATGCC-TTAAT.................................................................................................	22	19	0.05	1	0	1	0	0	0
..............................................................................................................................................................................................................................................AGCATGCGGAGGC--CACAGGATAAAAAC.............................	27	20	0.05	1	0	1	0	0	0
........................................................................................................................................TTCGGAAACAAAGAAATGAACATAAC......................................................................................................................................	26	20	0.05	1	0	1	0	0	0
...........................................................................................................TCAACGAGCAGTGGACAGGA.........................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0
....................................................................................................................................................................TTCTCATCATGCCAGACGGA................................................................................................................	20	20	0.05	1	0	1	0	0	0
.......................................................................................................................GGACAGGATACGTTCGATTCGG...........................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................................................................................................TAGCATGCGGAGGC--CACAGGAT...................................	22	20	0.05	1	0	1	0	0	0
.........................................................................................................TATCAACGAGCAGTGGACAGGATA.......................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
......................................................................................................................TGGACAGGATACGTTCGATTCGGAA.........................................................................................................................................................	25	20	0.05	1	0	1	0	0	0
.................................................................................................................AGCAGTGGACAGGATACGTTCGAT...............................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
...........................................................................................................................................................................................................................................AATAGCATGCGGAGGC--CACAG......................................	21	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................GAACATAACATTTCTCATCATGC........................................................................................................................	23	20	0.05	1	0	1	0	0	0
...................................................................................................................................................................TTTCTCATCATGCCAGACGGAATAGA...........................................................................................................	26	20	0.05	1	0	1	0	0	0
........................................................................................................................GACAGGATACGTTCGATTCGGAAACAA.....................................................................................................................................................	27	20	0.05	1	0	0	0	1	0
...........................................................................................................TCAACGAGCAGTGGACAGGATAC......................................................................................................................................................................	23	20	0.05	1	0	0	0	1	0
.........................................................................................................TATCAACGAGCAGTGGACAGGATACG.....................................................................................................................................................................	26	20	0.05	1	0	0	0	1	0
.....................................................................................................................................CGATTCGGAAACAAAGAAATGAAA...........................................................................................................................................	24	20	0.05	1	0	1	0	0	0
..................................................................................................................GCAGTGGACAGGATACGTTCGATTCGGA..........................................................................................................................................................	28	20	0.05	1	0	1	0	0	0
.....................................................................................................................................CGATTCGGAAACAAAGAAATGAAC...........................................................................................................................................	24	20	0.05	1	0	1	0	0	0
..............................................................................................................................................................TAACATTTCTCATCATGCCAGACG..................................................................................................................	24	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................................................GAAATAGCATGCGGAGGC--CAC........................................	21	20	0.05	1	0	1	0	0	0
..........................................................................................................................................CGGAAACAAAGAAATGAACATAACAT....................................................................................................................................	26	20	0.05	1	0	1	0	0	0
..............................................................................................................................................................................................................................................AGCATGCGGAGGC--CACAGGATAAA................................	24	20	0.05	1	0	0	0	1	0
..............................................................................................................................................................................................................................................AGCATGCGGAGGC--CACAGGATAAAAA..............................	26	20	0.05	1	0	1	0	0	0
....................................................................................................................AGTGGACAGGATACGTTCGATTCGGA..........................................................................................................................................................	26	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................................................GAAATAGCATGCGGAGGC--...........................................	18	20	0.05	1	0	1	0	0	0
.................................................................................................................................................AAAGAAATGAACATAACAT....................................................................................................................................	19	20	0.05	1	0	1	0	0	0
.............................................................................................................AACGAGCAGTGGACAGGATACGTT...................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
....................................................................................................................................................................TTCTCATCATGCCAGACGGAATAGAT..........................................................................................................	26	20	0.05	1	0	0	0	1	0
............................................................................................................CAACGAGCAGTGGACAGGATACG.....................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
.........................................................................................................................................TCGGAAACAAAGAAATGAACATAACATT...................................................................................................................................	28	20	0.05	1	0	1	0	0	0
........................................................................................................................................................................................................................................CGAAATAGCATGCGGAGGC--...........................................	19	20	0.05	1	0	0	0	1	0
....................................................................................................................................TCGATTCGGAAACAAAGAAAT...............................................................................................................................................	21	20	0.05	1	0	1	0	0	0
..............................................................................................................................................................................................................................................AGCATGCGGAGGC--CACAGGATAAAA...............................	25	20	0.05	1	0	0	0	1	0
........................................................................................................................................TTCGGAAACAAAGAAATGAACAT.........................................................................................................................................	23	20	0.05	1	0	1	0	0	0
....................................................................................................................................................................................................................................ACACCGAAATAGCATGCGGAGGC--CA.........................................	25	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................GAACATAACATTTCTCATCATGCCAGA....................................................................................................................	27	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................GAACATAACATTTCTCATCATGCC.......................................................................................................................	24	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................................................................................................TAGCATGCGGAGGC--CACAGGATAA.................................	24	20	0.05	1	0	0	0	1	0
........................................................................................................................................................................................................................................CGAAATAGCATGCGGAGGC--CA.........................................	21	20	0.05	1	0	0	0	1	0
......................................AAAC-AAAGGAGACCGAGAGA.............................................................................................................................................................................................................................................	20	20	0.05	1	0	0	1	0	0
.....................................................................................................................................CGATTCGGAAACAAAGAAATGAACATAA.......................................................................................................................................	28	20	0.05	1	0	1	0	0	0
....................................................................................................................................TCGATTCGGAAACAAAGAAATGA.............................................................................................................................................	23	20	0.05	1	0	1	0	0	0
......................................................................................................................................................................................................................................ACCGAAATAGCATGCGGAGGC--CACAGG.....................................	27	20	0.05	1	0	1	0	0	0
................................................................................................................................................................ACATTTCTCATCATGCCAGACGGA................................................................................................................	24	20	0.05	1	0	1	0	0	0
...........................................................................................................TCAACGAGCAGTGGACAGGATACGTTC..................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0
..........................................................................................................................................CGGAAACAAAGAAATGAACATAACATT...................................................................................................................................	27	20	0.05	1	0	1	0	0	0
........................................................................................................................................TTCGGAAACAAAGAAATGAACATAACAT....................................................................................................................................	28	20	0.05	1	0	1	0	0	0
..........................................................................................................................................................................................................................................AAATAGCATGCGGAGGC--CACAGG.....................................	23	20	0.05	1	0	0	0	1	0
.....................................................................................................................................................................................................................................CACCGAAATAGCATGCGGAGGC--CACA.......................................	26	20	0.05	1	0	1	0	0	0
...............................................................................................................................................................................................................................................GCATGCGGAGGC--CACAGGATAAAAA..............................	25	20	0.05	1	0	0	0	1	0
.........................................................................................................................ACAGGATACGTTCGATTCGG...........................................................................................................................................................	20	20	0.05	1	0	1	0	0	0
.......................................................................................................................................................................................................................................CCGAAATAGCATGCGGAGGC--C..........................................	21	20	0.05	1	0	1	0	0	0
........................................................................................................................................................................................................................................CGAAATAGCATGCGGAGGC--CACAGGAT...................................	27	20	0.05	1	0	1	0	0	0
...................................................................................................................CAGTGGACAGGATACGTTCGATT..............................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................................................................................................TAGCATGCGGAGGC--CACAGGATAAAT...............................	26	20	0.05	1	0	0	0	1	0
..................................................................................................................GCAGTGGACAGGATACGTTCGATT..............................................................................................................................................................	24	20	0.05	1	0	0	0	1	0
...................................................................................................................CAGTGGACAGGATACGTTCGAT...............................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
............................................................................................................CAACGAGCAGTGGACAGGATACGTTCG.................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0
..............................................................................................................................................................TAACATTTCTCATCATGCCAGACGGA................................................................................................................	26	20	0.05	1	0	0	0	1	0
......................................................................................................................................GATTCGGAAACAAAGAAATGAACATA........................................................................................................................................	26	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................GAACATAACATTTCTCATCATG.........................................................................................................................	22	20	0.05	1	0	1	0	0	0
.........................................................................................................................................TCGGAAACAAAGAAATGAACATAACACA...................................................................................................................................	28	20	0.05	1	0	1	0	0	0
............................................................................................................................................................................................................................................ATAGCATGCGGAGGC--CACAGG.....................................	21	20	0.05	1	0	1	0	0	0
.....................................................................................................................................CGATTCGGAAACAAAGAAATGAA............................................................................................................................................	23	20	0.05	1	0	1	0	0	0
............................................................................................................CAACGAGCAGTGGACAGGATAC......................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
..........................................................................................................ATCAACGAGCAGTGGACAGGAT........................................................................................................................................................................	22	20	0.05	1	0	0	0	1	0
...........................................................................................................TCAACGAGCAGTGGACAGGAT........................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
..............................................................................................................................................................TAACATTTCTCATCATGCCAGACGGAA...............................................................................................................	27	20	0.05	1	0	0	0	1	0
.............................................................................................................................................................................................................................................TAGCATGCGGAGGC--CACAGGATA..................................	23	20	0.05	1	0	1	0	0	0
.....................................................................................................................................................................TCTCATCATGCCAGACGGAAT..............................................................................................................	21	20	0.05	1	0	0	0	1	0
........................................................................................................................................................................................................................................CGAAATAGCATGCGGAGGC--C..........................................	20	20	0.05	1	0	1	0	0	0
....................................................................................................................................TCGATTCGGAAACAAAGAAATGAA............................................................................................................................................	24	20	0.05	1	0	0	0	1	0
................................................................................................................................................................ACATTTCTCATCATGCCAGACGGAA...............................................................................................................	25	20	0.05	1	0	1	0	0	0
........................................................................................................................................TTCGGAAACAAAGAAATGAACATAACATT...................................................................................................................................	29	20	0.05	1	0	1	0	0	0
......................................................................................................................................................................................................................................ACCGAAATAGCATGCGGAGGC--CACAGT.....................................	27	20	0.05	1	0	1	0	0	0
...........................................................................................................TCAACGAGCAGTGGACAGG..........................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0
..................................................................................................................GCAGTGGACAGGATACGTTCGAT...............................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
.....................................................................................................................GTGGACAGGATACGTTCGATTCGG...........................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................................................GAAATAGCATGCGGAGGC--CACAGGA....................................	25	20	0.05	1	0	1	0	0	0

droVir3

GAGTAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTTGTTGTAAAGGCGG------------------------------------------------------------CACGGA--AAGGTGCCAGATAAC--------------------G--GAGGG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGC..............................................................................................................................	25	20	37.40	748	0	0	167	13	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	200	57	72	2	0	0	0	17	0	103	15	65	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCT.............................................................................................................................	26	20	5.30	106	0	0	40	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	19	6	11	0	0	0	0	0	0	14	3	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACG...............................................................................................................................	24	20	3.05	61	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	12	22	0	0	0	0	0	3	0	12	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTAC................................................................................................................................	23	20	2.85	57	0	0	22	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	4	2	13	4	0	0	0	0	0	0	3	3	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGT....................................................................................................................................	19	20	2.35	47	0	0	3	0	6	1	2	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	2	7	2	2	0	1	0	0	0	0	0	2	0	3	1	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTTG...........................................................................................................................	28	4	2.25	9	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTT............................................................................................................................	27	4	2.25	9	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTC...................................................................................................................................	20	20	1.85	37	0	0	1	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	4	4	5	1	0	0	0	1	0	0	0	1	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCT..................................................................................................................................	21	20	1.50	30	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	5	1	0	0	0	1	0	3	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTA.................................................................................................................................	22	20	1.10	22	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	2	0	0	0	0	0	1	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
......................................................................................................................................................TTTCAGCGACAGGTCTACGCTTGTTG........................................................................................................................	26	4	1.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTTA...........................................................................................................................	28	4	0.75	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGG.....................................................................................................................................	18	20	0.50	10	0	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTTT...........................................................................................................................	28	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTC............................................................................................................................	27	20	0.40	8	0	0	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
....AG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGC..............................................................................................................................	24	20	0.40	8	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.....G----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGC..............................................................................................................................	23	20	0.35	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTTC...........................................................................................................................	28	6	0.33	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................GTCTACGCTTGTTGTAAAGGCGG------------------------------------------------------------...................................................	23	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................TCTACGCTTGTTGTAAAGGC.................................................................................................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTA............................................................................................................................	27	20	0.30	6	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....AG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACG...............................................................................................................................	23	20	0.30	6	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................ACTTTCAGCGACAGGTCTACGCTTGT..........................................................................................................................	26	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CTTTCAGCGACAGGTCTACGCTTGTTG........................................................................................................................	27	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....G----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTTGT..........................................................................................................................	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AAGGCGG------------------------------------------------------------CACGGA--AAGGTGCCAA.................................	23	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCA.............................................................................................................................	26	20	0.25	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
.....................................................................................................................................................CTTTCAGCGACAGGTCTACGC..............................................................................................................................	21	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
....AG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCT.............................................................................................................................	25	20	0.15	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................TTTCAGCGACAGGTCTACG...............................................................................................................................	19	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
....AG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCT..................................................................................................................................	20	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACA.......................................................................................................................................	16	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...................................................................................................................................................................................AGGCGG------------------------------------------------------------CACGGA--AAGGTGCCAGT................................	23	17	0.06	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGT.....................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTCA...........................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTAA...........................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGA..............................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTATT...............................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTT.................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....AG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTAC................................................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CTTTCAGCGACAGGTCTACG...............................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................TTTCAGCGACAGGTCTACGCTAA...........................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAG......................................................................................................................................	17	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CACGGA--AAGGTGCCAGATAAC--------------------........	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ACGGA--AAGGTGCCAGATAAC--------------------G--GAGG.	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTG.................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CTTTCAGCGACAGGTCTACGCT.............................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..GTAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTC...................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTACGCTAAA..........................................................................................................................	29	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................TTTCAGCGACAGGTCTACGCT.............................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAG----------------------------------------------------------------------------------------------------------------------------------------------ACTTTCAGCGACAGGTCTGT................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................TTCAGCGACAGGTCTACGCT.............................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATCAGTGAGAGGCTCG---------CTGAGAGGCTCGAAGGA-GTGGGCGTGGTGCGCGCCACACGGCGGCGCATACGCTTGGCGGACGGCAGTTGC---AGTCAGGTGGACTCGCAGCTGGAGACGACGATCAGCCTGGGAAATCAGCAAATCCAGATACCGTTGCTGATCCTGCCAGGAGTGATCGACGAT-TTGGTGCTAGGCTGGGATTTCTTGGCTAGTATAGGCACCACACTGGAGTGTGGCGGT--TTGGCGCTGAA--------------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
................................................................................................C---AGTCAGGTGGACTCGCAGCTGG..............................................................................................................................................................................	23	20	8.80	176	158	10	0	0	7	1
....................................................................................................................................................CAAATCCAGATACCGTTGCTGATCC...........................................................................................................................	25	20	2.90	58	43	0	0	0	15	0
................................................................................................C---AGTCAGGTGGACTCGCAGCTGGA.............................................................................................................................................................................	24	20	1.35	27	24	1	0	0	2	0
.............................................................................................................................................................................................................CTGGGATTTCTTGGCTAGTATAGGC..................................................................	25	20	1.25	25	25	0	0	0	0	0
................................................................................................C---AGTCAGGTGGACTCGCAGCT................................................................................................................................................................................	21	20	1.15	23	23	0	0	0	0	0
................................................................................................C---AGTCAGGTGGACTCGCAGCTGGAGAC..........................................................................................................................................................................	27	20	0.70	14	11	0	0	0	3	0
................................................................................................C---AGTCAGGTGGACTCGCAGCTGGAGA...........................................................................................................................................................................	26	20	0.70	14	13	1	0	0	0	0
................................................................................................C---AGTCAGGTGGACTCGCAGC.................................................................................................................................................................................	20	20	0.65	13	0	0	0	0	13	0
....................................................................................................AGTCAGGTGGACTCGCAGCTGG..............................................................................................................................................................................	22	20	0.55	11	11	0	0	0	0	0
....................................................................................................................................................CAAATCCAGATACCGTTGCTGATCCTG.........................................................................................................................	27	20	0.40	8	8	0	0	0	0	0
....................................................................................................................................................CAAATCCAGATACCGTTGCTGAT.............................................................................................................................	23	20	0.40	8	6	0	0	0	2	0
....................................................................................................................................................CAAATCCAGATACCGTTGCTGATCCT..........................................................................................................................	26	20	0.35	7	7	0	0	0	0	0
....................................................................................................................................................CAAATCCAGATACCGTTGCTGATCCTGC........................................................................................................................	28	20	0.30	6	6	0	0	0	0	0
.....................................................................................................................................................AAATCCAGATACCGTTGCTGATCCT..........................................................................................................................	25	20	0.30	6	6	0	0	0	0	0
.............................GAGGCTCGAAGGA-GTGGGCGTGG...................................................................................................................................................................................................................................................	23	19	0.21	4	3	0	0	0	0	1
......................................................................................................................................................AATCCAGATACCGTTGCTGATCC...........................................................................................................................	23	20	0.20	4	0	0	0	0	4	0
...............................................................................................................................................................................................................GGGATTTCTTGGCTAGTATAGGCAC................................................................	25	20	0.20	4	2	0	0	0	2	0
...............................................................................................................................................................................CCAGGAGTGATCGACGAT-TTGGTG................................................................................................	24	20	0.20	4	4	0	0	0	0	0
.............................................................................................................................................................................................................CTGGGATTTCTTGGCTAGTATAGGCAC................................................................	27	20	0.15	3	3	0	0	0	0	0
......................................................................................................................................................AATCCAGATACCGTTGCTGATCCT..........................................................................................................................	24	20	0.15	3	3	0	0	0	0	0
.....................................................................................................................................................AAATCCAGATACCGTTGCTGATCCTGC........................................................................................................................	27	20	0.15	3	3	0	0	0	0	0
................................................................................................C---AGTCAGGTGGACTCGCAG..................................................................................................................................................................................	19	20	0.15	3	3	0	0	0	0	0
.............................GAGGCTCGAAGGA-GTGGGC.......................................................................................................................................................................................................................................................	19	19	0.11	2	0	0	0	0	1	1
....................................................................................................AGTCAGGTGGACTCGCAGCT................................................................................................................................................................................	20	20	0.10	2	2	0	0	0	0	0
..........................................................GCCACACGGCGGCGCATACGCTTG......................................................................................................................................................................................................................	24	20	0.10	2	2	0	0	0	0	0
................................................................................................C---AGTCAGGTGGACTCGCAGCTGGAGAA..........................................................................................................................................................................	27	20	0.10	2	2	0	0	0	0	0
.............................................................................................................................................................................................................CTGGGATTTCTTGGCTAGTATAGGCAT................................................................	27	20	0.10	2	2	0	0	0	0	0
.....................................................................................................................................................AAATCCAGATACCGTTGCTGATC............................................................................................................................	23	20	0.10	2	2	0	0	0	0	0
.............................................................................................................................................................................................................CTGGGATTTCTTGGCTAGTATAGGCACC...............................................................	28	20	0.10	2	2	0	0	0	0	0
.............................................................................................................................................................................................................CTGGGATTTCTTGGCTAGTATA.....................................................................	22	20	0.10	2	1	0	0	0	0	1
..............................................................................................................................................................................................................TGGGATTTCTTGGCTAGTATAGGCA.................................................................	25	20	0.10	2	2	0	0	0	0	0
...............................................................................................................................................................................................................GGGATTTCTTGGCTAGTATAGGCACCA..............................................................	27	20	0.10	2	2	0	0	0	0	0
..................................TCGAAGGA-GTGGGCGTGGTGCGCGC............................................................................................................................................................................................................................................	25	19	0.05	1	0	0	0	0	1	0
.............TCG---------CTGAGAGGCTCGAAGGA-GTGG.........................................................................................................................................................................................................................................................	24	19	0.05	1	1	0	0	0	0	0
..................................TCGAAGGA-GTGGGCGTGGTGCGCGT............................................................................................................................................................................................................................................	25	19	0.05	1	1	0	0	0	0	0
..................................TCGAAGGA-GTGGGCGTGGTGCGCG.............................................................................................................................................................................................................................................	24	19	0.05	1	0	0	0	0	1	0
.........................CTGAGAGGCTCGAAGGA-GTGG.........................................................................................................................................................................................................................................................	21	19	0.05	1	1	0	0	0	0	0
................................GCTCGAAGGA-GTGGGCGTGGT..................................................................................................................................................................................................................................................	21	19	0.05	1	1	0	0	0	0	0
.............TCG---------CTGAGAGGCTCGAAGGA-GTGGG........................................................................................................................................................................................................................................................	25	19	0.05	1	0	0	0	0	1	0
...................................................................................................................................TCAGCCTGGGAAATCAGCAAATCCAGATA........................................................................................................................................	29	20	0.05	1	1	0	0	0	0	0
......................................................................................................................................................................................TGATCGACGAT-TTGGTGCTAGGC..........................................................................................	23	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................CAAATCCAGATACCGTTGCTGATCCTC.........................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
................................................................................................C---AGTCAGGTGGACTCGCAGCTGGATG...........................................................................................................................................................................	26	20	0.05	1	0	0	0	0	1	0
...............................................................................................................................................................................................................GGGATTTCTTGGCTAGTATAGG...................................................................	22	20	0.05	1	1	0	0	0	0	0
......................................................................................................................................................................................TGATCGACGAT-TTGGTGCTAGGCTGGG......................................................................................	27	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................CAAATCCAGATACCGTTGCTGATG............................................................................................................................	24	20	0.05	1	0	0	0	0	1	0
...............................................................................................................................ACGATCAGCCTGGGAAATCAG....................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1
......................................................................................................................................................................................TGATCGACGAT-TTGGTGCTAGGCTGGGA.....................................................................................	28	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................................................................................TTCTTGGCTAGTATAGGCACCACACC..........................................................	26	20	0.05	1	0	0	0	0	1	0
..............................................................................CTTGGCGGACGGCAGTTG........................................................................................................................................................................................................	18	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................................................................CTGGGATTTCTTGGCTAGTA.......................................................................	20	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................................................AAATCCAGATACCGTTGCTGATCC...........................................................................................................................	24	20	0.05	1	0	0	0	0	1	0
..............................................................................................................................................................................................................TGGGATTTCTTGGCTAGTATAG....................................................................	22	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................................................AGTGATCGACGAT-TTGGTGCTAGGC..........................................................................................	25	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................ACGATCAGCCTGGGAAATCAGC...................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
..........................................................GCCACACGGCGGCGCATACGCTTGG.....................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................................................................CTGGGATTTCTTGGCTAGTATAGGA..................................................................	25	20	0.05	1	1	0	0	0	0	0
.....................................................................................................GTCAGGTGGACTCGCAGCTGG..............................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
................................................................................................C---AGTCAGGTGGACTCGCAGCTGGAGAT..........................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................................TGCCAGGAGTGATCGACGAT-TTGGTGC...............................................................................................	27	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................................ATCCAGATACCGTTGCTGATCC...........................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
.....................................................................................................GTCAGGTGGACTCGCAGCTGGA.............................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................................................................................CTAGGCTGGGATTTCTTGGC............................................................................	20	20	0.05	1	1	0	0	0	0	0
..........................................................GCCACACGGCGGCGCATACGCTTGGC....................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................................................................CTGGGATTTCTTGGCTAGTATAG....................................................................	23	20	0.05	1	0	1	0	0	0	0
....GTGAGAGGCTCG---------CTGAGAGGC......................................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
...........................................................................................................TGGACTCGCAGCTGGAGACGACGA.....................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................................................................CCAGGAGTGATCGACGAT-TTGGTGC...............................................................................................	25	20	0.05	1	0	0	0	0	0	1
.......................................................................................................................................................................................................GCTAGGCTGGGATTTCTTGGCT...........................................................................	22	20	0.05	1	1	0	0	0	0	0
................................................................................................C---AGTCAGGTGGACTCGCAGCTGGAAT...........................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
......................................................................................................................CTGGAGACGACGATCAGCCTGGG...........................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................................................................CCAGGAGTGATCGACGAT-TTGGTGCTA.............................................................................................	27	20	0.05	1	0	0	0	0	0	1
..........................................................................................................................................................................................CGACGAT-TTGGTGCTAGG...........................................................................................	18	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................CAGCAAATCCAGATACCGTTGCTGATC............................................................................................................................	27	20	0.05	1	0	0	0	0	1	0
.............................................................................................................................................................................................................CTGGGATTTCTTGGCTAGTATAGGCA.................................................................	26	20	0.05	1	0	0	0	0	0	1
................................................................................................C---AGTCAGGTGGACTCGCAGCTGGAGAG..........................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
...........................................................CCACACGGCGGCGCATACGCTTGGC....................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................................................CCTGCCAGGAGTGATCGACGAT-TTGG..................................................................................................	26	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................CAGATACCGTTGCTGATCCTGCC.......................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.......................................................................................CGGCAGTTGC---AGTCAGGTGGA.........................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0
.TCAGTGAGAGGCTCG---------CTGAGAGGC......................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
......................................................................CGCATACGCTTGGCGGACGT..............................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0
......................................................................................................................................................AATCCAGATACCGTTGCTGATCCTGCC.......................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
...........................................................................................................TGGACTCGCAGCTGGAGACGACG......................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................................................................CCAGGAGTGATCGACGAT-TTGGTA................................................................................................	24	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................................................................................................GGGATTTCTTGGCTAGTATAGGC..................................................................	23	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................................TCGACGAT-TTGGTGCTAGGCTGGG......................................................................................	24	20	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................................................................TGGGATTTCTTGGCTAGTATAGGCAA................................................................	26	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................................................................CTGGGATTTCTTGGCTAGTATAGGCG.................................................................	26	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................GAGACGACGATCAGCCTGGGAAA........................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0

droGri2

CTAAAAAAAAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dya_1282

v2_chrUh_004:358781-358931 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-36.9	-36.9	-36.5