ID:

dya_1279

 Coordinate:

v2_chrUh_004:352881-353031 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.3 -11.1 -10.9 -10.6

Flybase annnotation

exon [dyak_GLEANR_11048:1]; CDS [Dyak\GE11050-cds]; intron [Dyak\GE11050-in]

No Repeatable elements found

mature
  1. 2L:21495126-21495150 +
  2. X:21205549-21205573 +
  3. v2_chrUn_1394:22171-22195 +
  4. v2_chrUn_5833:4005-4029 +
  5. v2_chrUn_6989:4071-4095 +
  6. v2_chr2L_random_001:228868-228892 -
  7. v2_chr2h_random_003:387140-387164 +
  8. v2_chr3R_random_170:135400-135424 -
  9. v2_chrUh_004:333826-333850 +
  10. v2_chrUh_004:339794-339818 +
  11. dya_1279  v2_chrUh_004:352948-352972 +
  12. dya_1281  v2_chrUh_004:358391-358415 +
  13. v2_chrUh_004:371313-371337 +
  14. v2_chrUn_008:252805-252829 -
  15. v2_chrUn_632:1218-1242 -
star
  1. v2_chrUn_5833:3946-3969 +
  2. v2_chrUh_004:333767-333790 +
  3. v2_chrUh_004:339735-339758 +
  4. dya_1279  v2_chrUh_004:352889-352912 +
  5. dya_1281  v2_chrUh_004:358332-358355 +
  6. v2_chrUh_004:365153-365176 +
  7. v2_chrUh_004:371254-371277 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTCATGGGTACAACTGCGAACGGAGCTACTGGAGTACTTCCTGCACCGAGGTATGGAGAACAGTTGGAAACCCAGTTAGGCCAGTTGAGGCAACGAGAGAACGAACCAGTAAGGGAGTACGCGATGAACCTGAGGAAGCTCATGAGGTTCACAAAGCTCACAGAGACGGAAAAACTCGACTGGGTGTACAAAAACTGTAGGAGCTAACTTAAACTGTACACAAGGAGAAACGGATTAACAACGCTAACAGA
**********************************************************......((............(((...((.(((..........((...((.....))..))..........))).))...)))))************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 GSM1528802
follicle cells		 M056
embryo
 V120
male body		 V058
head
 V052
head
.....................................................................................................................TACGCGATGAACCTGAGGAAGCTCA............................................................................................................. 25 0 15 2.20 33 16 15 0 1 0 1
.....................................................................................................................TACGCGATGAACCTGAGGAAGCTC.............................................................................................................. 24 0 15 1.07 16 14 0 0 2 0 0
.....................................................................................................................TACGCGATGAACCTGAGGAAGCT............................................................................................................... 23 0 15 0.53 8 6 0 1 1 0 0
.....................................................................................................................................................................................................TAGGAGCTAACTTAAACTGTACACAAG........................... 27 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................TGGGTGTACAAAAACTGTAGGAGC............................................... 24 0 14 0.50 7 7 0 0 0 0 0
.....................................................................................................................TACGCGATGAACCTGAGGAAGC................................................................................................................ 22 0 15 0.40 6 6 0 0 0 0 0
.........ACAACTGCGAACGGAGCTACTGGAG......................................................................................................................................................................................................................... 25 0 3 0.33 1 0 1 0 0 0 0
.TCATGGGTACAACTGCGAACGGAGC................................................................................................................................................................................................................................. 25 0 3 0.33 1 0 0 1 0 0 0
...............GCGAACGGAGCTACTGGAGTACTTCC.................................................................................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0
....TGGGTACAACTGCGAACGGAGCTACT............................................................................................................................................................................................................................. 26 0 3 0.33 1 0 0 1 0 0 0
..........................................................AACAGTTGGAAACCCAGTTAGGCC......................................................................................................................................................................... 24 0 7 0.29 2 2 0 0 0 0 0
..........................TACTGGAGTACTTCCTGCACCGAGGTA...................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
.............................TGGAGTACATCCTGCACCGAGGTATG.................................................................................................................................................................................................... 26 1 5 0.20 1 1 0 0 0 0 0
....................................................................................................................................................TCACAAAGCTCACAGAGACGGAAAAACT........................................................................... 28 0 5 0.20 1 1 0 0 0 0 0
....................................................................................................................................................TCACAAAGCTCACAGAGACGGAAAAAC............................................................................ 27 0 5 0.20 1 1 0 0 0 0 0
..................................TACTTCCTGCACCGAGGTATGGAGAAC.............................................................................................................................................................................................. 27 0 5 0.20 1 0 0 1 0 0 0
..............................................................................................................................................TGAGGTTCACAAAGCTCACAGAGACGGA................................................................................. 28 0 5 0.20 1 1 0 0 0 0 0
...................................................................................................................................................TTCACAAAGCTCACAGAGACGGAAAA.............................................................................. 26 0 5 0.20 1 1 0 0 0 0 0
.....................................................................................TGAGGCAACGAGAGAACGAACCAGTA............................................................................................................................................ 26 0 6 0.17 1 1 0 0 0 0 0
...........................................................................................AAAGAGAGAACGAACCAGTAAGGGAG...................................................................................................................................... 26 1 6 0.17 1 0 0 1 0 0 0
....................................................................................................................................................................................TGGGTGTACAAAAACTGTAGGAGCT.............................................. 25 0 12 0.17 2 2 0 0 0 0 0
.....................................................................................TGAGGCAACGAGAGAACGAACCAGT............................................................................................................................................. 25 0 6 0.17 1 1 0 0 0 0 0
...........................................................................................AACGAGAGAACGAACCAGTAAGGGAG...................................................................................................................................... 26 0 6 0.17 1 0 0 0 0 1 0
............................................................................TAGGCCAGTTGAGGCAACGAGAGAAC..................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0
........................................................................................................ACCAGTAAGGGAGTACGCGATGAACC......................................................................................................................... 26 0 6 0.17 1 0 0 1 0 0 0
............................................................................TAGGCCAGTTGAGGCAACGAGAGAACG.................................................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0 0
..........................................................AACAGTTGGAAACCCAGTT.............................................................................................................................................................................. 19 0 7 0.14 1 1 0 0 0 0 0
....................................................................AACCCAGTTAGGCCAGTTGAGG................................................................................................................................................................. 22 0 7 0.14 1 1 0 0 0 0 0
....................................................ATGGAGAACAGTTGGAAACCCAGT............................................................................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0 0
.....................................................TGGAGAACAGTTGGAAACCCAGTTAG............................................................................................................................................................................ 26 0 7 0.14 1 1 0 0 0 0 0
..........................................................AACAGTTGGAAACCCAGTTAGGCCAG....................................................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0
....................................................................AACCCAGTTAGGCCAGTTGAGGC................................................................................................................................................................ 23 0 7 0.14 1 1 0 0 0 0 0
..........................................................AACAGTTGGAAACCCAGTTAGGCCA........................................................................................................................................................................ 25 0 7 0.14 1 1 0 0 0 0 0
......................................................................................................................ACGCGATGAACCTGAGGAAGC................................................................................................................ 21 0 15 0.13 2 2 0 0 0 0 0
.....................................................................................................................TACGCGATGAACCTGAGGA................................................................................................................... 19 0 15 0.13 2 2 0 0 0 0 0
.........................................................................................................................................................................................GTACAAAAACTGTAGGAGCTAAC........................................... 23 0 12 0.08 1 1 0 0 0 0 0
.....................................................................................................................TACGCGATGAACCTGAGGAAGCTCAT............................................................................................................ 26 0 13 0.08 1 1 0 0 0 0 0
.....................................................................................................................TACGCGATGAACCTGAGGAAGCTCATG........................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0
......................................................................................................................ACGCGATGAACCTGAGGAAGCTCAT............................................................................................................ 25 0 13 0.08 1 1 0 0 0 0 0
..................................................................................................................................................................................ACTGGGTGTACAAAAACTGTAGGA................................................. 24 0 14 0.07 1 1 0 0 0 0 0
....................................................................................................................................................................................TGGGTGTACAAAAACTGTAGGAG................................................ 23 0 14 0.07 1 0 0 0 1 0 0
............................................................................................................................................................................AACTCGACTGGGTGTACAAAAACTG...................................................... 25 0 14 0.07 1 1 0 0 0 0 0
..........................................................................................................................................................................AAAACTCGACTGGGTGTACAAAAACTG...................................................... 27 0 14 0.07 1 1 0 0 0 0 0
.....................................................................................................................................................................................GGGTGTACAAAAACTGTAGGAG................................................ 22 0 14 0.07 1 1 0 0 0 0 0
..................................................................................................................................................................................ACTGGGTGTACAAAAACTGTAGGAGC............................................... 26 0 14 0.07 1 1 0 0 0 0 0
....................................................................................................................................................................................TGGGTGTAGAAAAACTGTAGGAG................................................ 23 1 14 0.07 1 1 0 0 0 0 0
.....................................................................................................................TACGCGATGAACCTGAGGAAG................................................................................................................. 21 0 15 0.07 1 1 0 0 0 0 0
.....................................................................................................................TACGCGATAAACCTGAGGAAGCTCA............................................................................................................. 25 1 15 0.07 1 1 0 0 0 0 0
............................................................................................................................TGAACCTGAGGAAGCTCA............................................................................................................. 18 0 15 0.07 1 1 0 0 0 0 0
.....................................................................................................................TACGCGATAAACCTGAGGAAGGTC.............................................................................................................. 24 2 15 0.07 1 1 0 0 0 0 0
............................................................................................................................TGAACCTGCGGAAGATCATTA.......................................................................................................... 21 3 15 0.07 1 0 0 0 1 0 0
.....................................................................................................................TACGCGATGAACCTGAGGAAGT................................................................................................................ 22 1 15 0.07 1 1 0 0 0 0 0
.....................................................................................................................TACGCGATGAACCGGAGGAAGCTCA............................................................................................................. 25 1 15 0.07 1 0 1 0 0 0 0
.....................................................................................................................TACGCGAGGAACCTGAGGAAGCTCA............................................................................................................. 25 1 16 0.06 1 0 1 0 0 0 0
................................................................................................................GGGAGTACCCGCTGAACTT........................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

GAGTACCCATGTTGACGCTTGCCTCGATGACCTCATGAAGGACGTGGCTCCATACCTCTTGTCAACCTTTGGGTCAATCCGGTCAACTCCGTTGCTCTCTTGCTTGGTCATTCCCTCATGCGCTACTTGGACTCCTTCGAGTACTCCAAGTGTTTCGAGTGTCTCTGCCTTTTTGAGCTGACCCACATGTTTTTGACATCCTCGATTGAATTTGACATGTGTTCCTCTTTGCCTAATTGTTGCGATTGTCT
*************************************************************************************************************......((............(((...((.(((..........((...((.....))..))..........))).))...)))))********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 GSM1528802
follicle cells		 M056
embryo
 V120
male body		 V046
embryo
 V058
head
....................................................................................................................................................................CTGCCTTTTTGAGCTGACCCACATGT............................................................. 26 0 7 5.86 41 11 29 1 0 0 0
.....................................................................................................GCTTGGTCATTCCCTCATGCGCTACT............................................................................................................................ 26 0 6 4.17 25 25 0 0 0 0 0
..........GTTGACGCTTGCCTCGATGACCTCAT....................................................................................................................................................................................................................... 26 0 3 2.33 7 7 0 0 0 0 0
....................................................................................................TGCTTGGTCATTCCCTCATGCGCTACT............................................................................................................................ 27 0 5 2.00 10 8 0 2 0 0 0
.........................................ACGTGGCTCCATACCTCTTGTCAACCT....................................................................................................................................................................................... 27 0 6 1.50 9 9 0 0 0 0 0
.........................................................................TCAATCCGGTCAACTCCGTTGCTCT......................................................................................................................................................... 25 0 7 1.00 7 7 0 0 0 0 0
......................................................................................................CTTGGTCATTCCCTCATGCGCTACT............................................................................................................................ 25 0 6 0.67 4 4 0 0 0 0 0
...........................TGACCTCATGAAGGACGTGGCTCCAT...................................................................................................................................................................................................... 26 0 5 0.60 3 3 0 0 0 0 0
..............................CCTCATGAAGGACGTGGCTCCATACCT.................................................................................................................................................................................................. 27 0 5 0.60 3 1 0 1 1 0 0
....................................GAAGGACGTGGCTCCATACCTCTTGT............................................................................................................................................................................................. 26 0 5 0.60 3 3 0 0 0 0 0
.........................................................................................................................................CGAGTACTCCAAGTGTTTCGAGTGTCT....................................................................................... 27 0 5 0.60 3 3 0 0 0 0 0
...........................................GTGGCTCCATACCTCTTGTCAACCT....................................................................................................................................................................................... 25 0 7 0.57 4 4 0 0 0 0 0
.................................................CCATACCTCTTGTCAACCTTTGGGT................................................................................................................................................................................. 25 0 7 0.57 4 3 0 1 0 0 0
.......................................................................GGTCAATCCGGTCAACTCCGTTGCTCT......................................................................................................................................................... 27 0 7 0.57 4 4 0 0 0 0 0
..........................................................................CAATCCGGTCAACTCCGTTGCTCTCT....................................................................................................................................................... 26 0 7 0.57 4 4 0 0 0 0 0
..........................................................................................................................................................TCGAGTGTCTCTGCCTTTTTGAGCT........................................................................ 25 0 7 0.57 4 0 3 1 0 0 0
.....................................................................................................GCTTGGTCATTCCCTCATGCGCTAC............................................................................................................................. 25 0 6 0.50 3 3 0 0 0 0 0
..............................................................................CCGGTCAACTCCGTTGCTCTCTTGCTT.................................................................................................................................................. 27 0 6 0.50 3 1 2 0 0 0 0
..........................................CGTGGCTCCATACCTCTTGTCAACCT....................................................................................................................................................................................... 26 0 6 0.50 3 2 0 1 0 0 0
........................................................................................................TGGTCATTCCCTCATGCGCTACT............................................................................................................................ 23 0 6 0.50 3 2 0 1 0 0 0
..............................................................................CCGGTCAACTCCGTTGCTCTCTTGCT................................................................................................................................................... 26 0 6 0.50 3 2 0 1 0 0 0
.......................................................................................................TTGGTCATTCCCTCATGCGCTACT............................................................................................................................ 24 0 6 0.50 3 2 0 0 1 0 0
.....................................................................................................................................................................................................................GACATGTGTTCCTCTTTGCCTAATTG............ 26 0 7 0.43 3 3 0 0 0 0 0
......................................................................GGGTCAATCCGGTCAACTCCGTTGCTCT......................................................................................................................................................... 28 0 7 0.43 3 3 0 0 0 0 0
........................................................................GTCAATCCGGTCAACTCCGTTGCTCT......................................................................................................................................................... 26 0 7 0.43 3 3 0 0 0 0 0
...........................................GTGGCTCCATACCTCTTGTCAACCTT...................................................................................................................................................................................... 26 0 7 0.43 3 2 0 1 0 0 0
...........................................GTGGCTCCATACCTCTTGTCAACCTTT..................................................................................................................................................................................... 27 0 7 0.43 3 3 0 0 0 0 0
............................................TGGCTCCATACCTCTTGTCAACC........................................................................................................................................................................................ 23 0 7 0.43 3 3 0 0 0 0 0
..........................................................................CAATCCGGTCAACTCCGTTGCTCT......................................................................................................................................................... 24 0 7 0.43 3 3 0 0 0 0 0
....................................................................TTGGGTCAATCCGGTCAACTCCGTTGCT........................................................................................................................................................... 28 0 7 0.43 3 0 3 0 0 0 0
................................................................................................................................GGACTCCTTCGAGTACTCCAAGTGTT................................................................................................. 26 0 5 0.40 2 2 0 0 0 0 0
..................................................................................................CTTGCTTGGTCATTCCCTCATGCGCTACT............................................................................................................................ 29 0 5 0.40 2 1 0 1 0 0 0
.................................................................................................................................................CCAAGTGTTTCGAGTGTCTCTGCCT................................................................................. 25 0 5 0.40 2 1 0 1 0 0 0
....................................GAAGGACGTGGCTCCATACCTCTTG.............................................................................................................................................................................................. 25 0 5 0.40 2 2 0 0 0 0 0
....................................................................................................TGCTTGGTCATTCCCTCATGCGCTAC............................................................................................................................. 26 0 5 0.40 2 2 0 0 0 0 0
................................................................................................................................GGACTCCTTCGAGTACTCCAAGTGTTT................................................................................................ 27 0 5 0.40 2 2 0 0 0 0 0
.....................................................................................................................................................................TGCCTTTTTGAGCTGACCCACATGT............................................................. 25 0 11 0.36 4 1 3 0 0 0 0
........................................................................................CCGTTGCTCTCTTGCTTGGTCATTCCCT....................................................................................................................................... 28 0 6 0.33 2 1 0 1 0 0 0
..........................................CGTGGCTCCATACCTCTTGTCAACCTT...................................................................................................................................................................................... 27 0 6 0.33 2 2 0 0 0 0 0
..GTACCCATGTTGACGCTTGCCTCGAT............................................................................................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0
..........GTTGACGCTTGCCTCGATGACCT.......................................................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0
..........................................................................CAATCCGGTCAACTCCGTTGCTCTCTT...................................................................................................................................................... 27 0 6 0.33 2 2 0 0 0 0 0
...................................................................................CAACTCCGTTGCTCTCTTGCTTGGTCAT............................................................................................................................................ 28 0 6 0.33 2 2 0 0 0 0 0
.........TGTTGACGCTTGCCTCGATGACC........................................................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0
.........................................................................................................GGTCATTCCCTCATGCGCTACT............................................................................................................................ 22 0 6 0.33 2 2 0 0 0 0 0
.............................................................................................GCTCTCTTGCTTGGTCATTCCCTCA..................................................................................................................................... 25 0 6 0.33 2 0 2 0 0 0 0
............................................................................ATCCGGTCAACTCCGTTGCTCTCTT...................................................................................................................................................... 25 0 6 0.33 2 2 0 0 0 0 0
....................................................................TTGGGTCAATCCGGTCAACTCCGT............................................................................................................................................................... 24 0 7 0.29 2 2 0 0 0 0 0
..................................................................................................................................................................CTCTGCCTTTTTGAGCTGACCCACAT............................................................... 26 0 7 0.29 2 0 0 2 0 0 0
............................................TGGCTCCATACCTCTTGTCAACCTT...................................................................................................................................................................................... 25 0 7 0.29 2 2 0 0 0 0 0
...........................................GTGGCTCCATACCTCTGGTCAACCT....................................................................................................................................................................................... 25 1 7 0.29 2 2 0 0 0 0 0
.................................................CCATACCTCTTGTCAACCTTTGGGTCAAT............................................................................................................................................................................. 29 0 7 0.29 2 1 0 1 0 0 0
......................................................................GGGTCAATCCGGTCAACTCCGTTGCT........................................................................................................................................................... 26 0 7 0.29 2 2 0 0 0 0 0
.........................................................................TCAATCCGGTCAACTCCGTTGCTCTCT....................................................................................................................................................... 27 0 7 0.29 2 2 0 0 0 0 0
................................................................................................................................................................GTCTCTGCCTTTTTGAGCTGACCCACAT............................................................... 28 0 7 0.29 2 2 0 0 0 0 0
......................................................................................................................................................................GCCTTTTTGAGCTGACCCACATGT............................................................. 24 0 11 0.27 3 3 0 0 0 0 0
.....................................................................................................................ATGCGCTACTTGGACTCCTTCGAGT............................................................................................................. 25 0 15 0.20 3 3 0 0 0 0 0
............................................................................................................................................GTACTCCAAGTGTTTCGAGTGTCT....................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................CCAAGTGTTTCGAGTGTCTCTGCTTTT............................................................................... 27 1 5 0.20 1 0 0 1 0 0 0
.........................................................................................................................................CGAGTACTCCAAGTGTTTCGAGTGTC........................................................................................ 26 0 5 0.20 1 1 0 0 0 0 0
.............................ACCTCATGAAGGACGTGGCTCCATACCT.................................................................................................................................................................................................. 28 0 5 0.20 1 1 0 0 0 0 0
..............................................................................................................................................ACTCCAAGTGTTTCGAGTGTCTCTGCCT................................................................................. 28 0 5 0.20 1 1 0 0 0 0 0
............................................................................................................................................GTACTCCAAGTGTTTCGAGTGTCTCT..................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
......................................AGGACGTGGCTCCATACCTCTTGT............................................................................................................................................................................................. 24 0 5 0.20 1 0 0 1 0 0 0
............................GACCTCATGAAGGACGTGGCTCCAT...................................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
...............................CTCATGAAGGACGTGGCTCCATACCT.................................................................................................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0 0
.....................................................................................................................................................GTGTTTCGAGTGTCTCTGCCTTTTT............................................................................. 25 0 5 0.20 1 0 0 0 0 1 0
........................................................................................................................................TCGAGTACTCCAAGTGTTTCGAGTGTT........................................................................................ 27 1 5 0.20 1 1 0 0 0 0 0
...................................................................................................TTGCTTGGTCATTCCCTCATGCGCTACT............................................................................................................................ 28 0 5 0.20 1 1 0 0 0 0 0
...........................TGACCTCATGCAGGACGTGGCTCCAT...................................................................................................................................................................................................... 26 1 5 0.20 1 0 0 0 0 0 1
.................................................................................................................................................CCAAGTGTTTCGAGTGTCTCTGCCTT................................................................................ 26 0 5 0.20 1 0 0 1 0 0 0
..........................................................................................................GTCATTCCCTCATGCGCTACT............................................................................................................................ 21 0 6 0.17 1 1 0 0 0 0 0
.....................................................................................................GCTTGGTCATTCCCTCATGCGCTACTT........................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0 0
..........................................................................................GTTGCTCTCTTGCTTGGTCATTCCCTCAT.................................................................................................................................... 29 0 6 0.17 1 1 0 0 0 0 0
..............................................................................CCGGTCAACTCCGTTGCTGTCTTGCTT.................................................................................................................................................. 27 1 6 0.17 1 1 0 0 0 0 0
...............................................................................................................TCCCTCATGCGCTACTTGGACTCCTT.................................................................................................................. 26 0 6 0.17 1 1 0 0 0 0 0
.........................................ACGTGGCTCCATACCTCTTGTCAACC........................................................................................................................................................................................ 26 0 6 0.17 1 1 0 0 0 0 0
....................................................................................................................................................................................................................TGACATGTGTTCCTCTTTGCCTAATT............. 26 0 12 0.17 2 2 0 0 0 0 0
......................................................................................................CTTGGTCATTCCCTCATGCGCTA.............................................................................................................................. 23 0 6 0.17 1 1 0 0 0 0 0
...........................................................................................TTGCTCTCTTGCTTGGTCATTCCCTCAT.................................................................................................................................... 28 0 6 0.17 1 1 0 0 0 0 0
.........................................ACGTGGCTCCATACCTCTTGTCAAC......................................................................................................................................................................................... 25 0 6 0.17 1 1 0 0 0 0 0
...........................................................................................................TCATTCCCTCATGCGCTACT............................................................................................................................ 20 0 6 0.17 1 1 0 0 0 0 0
..............................................................................CCGGTCAACTCCGGTGCTCTCTTGCTT.................................................................................................................................................. 27 1 6 0.17 1 0 1 0 0 0 0
...............................................................................................................TCCCTCATGCGCTACTTGGACTCCT................................................................................................................... 25 0 6 0.17 1 1 0 0 0 0 0
...............................................................................CGGTCAACTCCGTTGCTCTCTTGCTT.................................................................................................................................................. 26 0 6 0.17 1 1 0 0 0 0 0
..............................................................................CCGGTCAACTGCGTTGCTCTCTTGCTT.................................................................................................................................................. 27 1 6 0.17 1 0 1 0 0 0 0
........................................................................................CCGTTGCTCTCTTGCTTGGTCATTCCCTC...................................................................................................................................... 29 0 6 0.17 1 1 0 0 0 0 0
....................................................................................................................CATGCGCTACTTGGACTCCTTCGAGT............................................................................................................. 26 0 6 0.17 1 1 0 0 0 0 0
...........................................................................AATCCGGTCAACTCCGTTGCTCTCTT...................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0
............................................................................................TGCTCTCTTGCTTGGTCATTCCCT....................................................................................................................................... 24 0 6 0.17 1 1 0 0 0 0 0
.........................................ACGTGGCTCCATACCTCTTGTCAACCTT...................................................................................................................................................................................... 28 0 6 0.17 1 1 0 0 0 0 0
.................................................................................................................CCTCATGCGCTACTTGGACTCCTT.................................................................................................................. 24 0 6 0.17 1 0 0 1 0 0 0
.................................................................................................................................................................TCTCTGCCTTTTTGAGCTGACCCACAT............................................................... 27 0 7 0.14 1 1 0 0 0 0 0
..................................................................................................................................................................CTCTGCCTTTTTGAGCTGACCCACATTT............................................................. 28 1 7 0.14 1 0 0 1 0 0 0
.........................................................................................................................................................TTCGAGTGTCTCTGCCTTTTTGAGC......................................................................... 25 0 7 0.14 1 1 0 0 0 0 0
................................................................................................................................................................GTCTCTGCCTTTTTGAGCTGACCC................................................................... 24 0 7 0.14 1 1 0 0 0 0 0
................................................................................................................................................................GTCTCTGCCTTTTTGAGCTGACCCAC................................................................. 26 0 7 0.14 1 1 0 0 0 0 0
..............................................................................................................................................................................GAGCTGACCCACATGTTTTTGACATCCT................................................. 28 0 14 0.14 2 2 0 0 0 0 0
............................................TGGCTCCATACCTCTTGTCAACCTTT..................................................................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0
....................................................................................................................................................................CTGACTTTTTGAGCTGACGCACATGT............................................................. 26 2 7 0.14 1 0 1 0 0 0 0
.........................................................................................................................................................TTCGAGTGTCTCTGCCTTTTTGAGCT........................................................................ 26 0 7 0.14 1 0 0 1 0 0 0
......................................................................................................................................................................................................................ACATGTGTTCCTCTTTACCTAATTG............ 25 1 7 0.14 1 1 0 0 0 0 0
...................................................................................................................................................................TCTGCCTTTTTGAGCTGACCCACATGT............................................................. 27 0 7 0.14 1 0 0 1 0 0 0
....................................................................TTGGGTCAATCCGGTCAACTCCGTT.............................................................................................................................................................. 25 0 7 0.14 1 1 0 0 0 0 0
..........................................................................................................................................................TCGCGTGTCTCTGCCTTTTTGAGCT........................................................................ 25 1 7 0.14 1 0 0 0 0 1 0
...............................................................................................................................................................................................................................CCTCTTTGCCTAATTGTTGCGAT..... 23 0 7 0.14 1 1 0 0 0 0 0
.........................................................................TCAATTCGGTCAACTCCGTTGCTCT......................................................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0
........................................................................GTCAATCCGGTCAACTCCGTTGCTC.......................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0
..................................................................................................................................................................CTCTGCCTTTTTGAGCTGACCCACATGT............................................................. 28 0 7 0.14 1 1 0 0 0 0 0
.............................................................................TCCGGTCAACTCCGGTGCTCTCT....................................................................................................................................................... 23 1 7 0.14 1 1 0 0 0 0 0
....................................................................................................................................................................CTGCCTTTTTGAGATGACCCACATGT............................................................. 26 1 7 0.14 1 0 1 0 0 0 0
....................................................................................................................................................................CTGCCTTTTTGAGCTGACCCACACGT............................................................. 26 1 7 0.14 1 0 0 1 0 0 0
.............................................GGCTCCATACCTCTTGTCAACCTT...................................................................................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0 0
......................................................................................................................................................................................................................ACATGTGTTCCTCTTTGCCTAATTG............ 25 0 7 0.14 1 1 0 0 0 0 0
.........................................................................TCAATCCGGTCAACTCCGGTGCTCTCT....................................................................................................................................................... 27 1 7 0.14 1 1 0 0 0 0 0
............................................................................................................................................................................................................................GTTCCTCTTTGCCTAATTGTTGCGAT..... 26 0 7 0.14 1 1 0 0 0 0 0
.........................................................................TCAATCCTGTCAACTCCGTTGCTCT......................................................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0
................................................TCCATACCTCTTGTCAACCTTTGGGT................................................................................................................................................................................. 26 0 7 0.14 1 1 0 0 0 0 0
.................................................CCATACCTCTTGTCAACCTTTGGTT................................................................................................................................................................................. 25 1 7 0.14 1 0 0 1 0 0 0
..........................................................................CAATCCGGTCAACTCCGTTGCTC.......................................................................................................................................................... 23 0 7 0.14 1 1 0 0 0 0 0
.....................................................................................................GCTTGGTCATTCCCTCATGCGC................................................................................................................................ 22 0 7 0.14 1 1 0 0 0 0 0
..........................................................................................................................................................TCGAGTGTCTCTGCCTTTTTGCGCT........................................................................ 25 1 7 0.14 1 0 1 0 0 0 0
..............................................................................CCGGTCAACTCCGTTGCTCT......................................................................................................................................................... 20 0 7 0.14 1 1 0 0 0 0 0
..........................................................................CAATCCGGTCAACTCCGTTGCTCTC........................................................................................................................................................ 25 0 7 0.14 1 1 0 0 0 0 0
..........................................................................CAATCCGGTCAACTCTGTTGCTCT......................................................................................................................................................... 24 1 7 0.14 1 1 0 0 0 0 0
.......................................................................................................................................................................CCTTTTTGAGCTGACCCACATGTTTTA......................................................... 27 1 11 0.09 1 1 0 0 0 0 0
.....................................................................................................................................................................TGCCTTTTTGAGCTGACCCACATGTT............................................................ 26 0 11 0.09 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GACATGTGTTCCTCTTTGCCTAATT............. 25 0 12 0.08 1 1 0 0 0 0 0
...................................................................................................................................................................................GACCCACATGTTTTTGACATCCTCGAT............................................. 27 0 12 0.08 1 1 0 0 0 0 0
..................................................................................................................................................................................TGACCCACATGTTTTTGACATCCTCGATT............................................ 29 0 12 0.08 1 1 0 0 0 0 0
....................................................................................................................................................................................................................TGACATGTGTTCCTCTTTGCCTAAT.............. 25 0 12 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................CATGTGTTCCTCTTTGCCTAATT............. 23 0 12 0.08 1 1 0 0 0 0 0
...................................................................................................................................................................................................................TTGACATGTGTTCCTCTTTGCCTAAT.............. 26 0 12 0.08 1 1 0 0 0 0 0
...........................................................................................................................TACTTGGACTCCTTCGAGTACTCCAA...................................................................................................... 26 0 13 0.08 1 1 0 0 0 0 0
.....................................................................................................................ATGCGCTACTTGGACTCCTTCGAGTACT.......................................................................................................... 28 0 13 0.08 1 1 0 0 0 0 0
............................................................................................................................ACTTGGACTCCTTCGAGAACTCCAAG..................................................................................................... 26 1 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................GCGCTACTTGGACTCCTTCGAGTAC........................................................................................................... 25 0 13 0.08 1 1 0 0 0 0 0
................................................................................................................................................................................GCTGACCCACATGTTTTTGACATCCT................................................. 26 0 14 0.07 1 1 0 0 0 0 0
...............................................................................................................................................................................AGCTGACCCACATGTTTTTGACAT.................................................... 24 0 14 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................................TGAGCTGACCCACATGTTTTTGACAT.................................................... 26 0 14 0.07 1 1 0 0 0 0 0
..................TCGCCTCGATGGCCTCA........................................................................................................................................................................................................................ 17 2 14 0.07 1 0 0 0 0 0 1
............................................................................................................................................................................TTGAGCTGACCCACATGTTTCTGACAT.................................................... 27 1 14 0.07 1 1 0 0 0 0 0
..............................................................................................................................................................................GAGCTGACCCACATGTTTTTGACA..................................................... 24 0 14 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................................TGAGCTGACCCACATGTTTTT......................................................... 21 0 14 0.07 1 1 0 0 0 0 0
...........................................................................................................................................................................TTTGAGCTGACCCACATGTATTTGACAT.................................................... 28 1 14 0.07 1 1 0 0 0 0 0
..............................................................................................................................................................................GAGCTGACCCACATGTTTTTGACAT.................................................... 25 0 14 0.07 1 1 0 0 0 0 0
............................................................................................................................................................................TTGAGCTGACCCACATGTTTTTGACAT.................................................... 27 0 14 0.07 1 1 0 0 0 0 0
......................................................................................................................TGCGCTACTTGGACTCCTTCGAGT............................................................................................................. 24 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................................GGCGCTACTTGGACTCCTTCGAGT............................................................................................................. 24 1 15 0.07 1 0 0 1 0 0 0
................................................................................................................................GGACTCCTTCGAGTACTCCAAGT.................................................................................................... 23 0 15 0.07 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 v2_chrUh_004:352831-353081 + dya_1279 CTCATGGGTACAACTGCGAACGGAGCTACTGGAGTACTTCCTGC-ACCGAGGTATGGAGAACAGTTGGAAACCCAGTTAGGCCAGTTGAGGCAACGAGAGAACGAAC--CAGTAAGGGAGTACGCGATGAACCTGAGGAAGCTCATGAGGTTCACAAAGCTCACAGAGACGGAAAAACTCGACTGGGTGTACAAAAACTGTAGGAGC-TAACTTAAACTGTACACAAGGAGAAACGGATTAACAACGCTAACAGA
droEre2 scaffold_4929:24317346-24317587 - GACATAGGCACAACTAACAACAGAGCTACGAGAATACTTCCTGGCCCCGCGGTATGAGGAACAATTGGAGACTTGATTA-GTCACTTAAGACAGCGGGAAACCGAAC--CCGTAAGAGA---------GGAACTACGAAAGCTGATGCGATTTACGAGGTTTTCGGAAATGGAGAAACTCGACCGCATATACAGGAATTGCAGGAGT-ATTATAAAGCTGTACACGAGGAGGTCCGGGCTCGCATCGCTGACGGA
droSec2 scaffold_43:189881-190095 - TACATGTGCGCAATTAACGGCGGAGCAATAGGAATACTTCCTGCAACCAAGATATAAGAAACAACTGTAGACCAGAATTAATCAGTTGAGACAGCGGGACACCGAAC--CCGTTAGGGAG-------TGGAACTGCGGAAACTAATGCGGTTTACGAGGTTATCGGAACAAGTGAAACTTGACCGCATAAACATGAAGGACCGCA-------------TATACACGAGGAGGTCCGG------------------
droSim2 node_97861:4-180 - CTCTTGGGTTCAATTGAGAACGGAACTGTTAGAGTACTTCTTACCACCGAGGTACGAGGAGCAGTTGCAAACCCAAATAGCACAGTTGAGACAGAGAGAGAACGAAC--CAGCAAGGGAATACGCGATGAGCCTGAGGAAGCTCATGAGGTTCACGAAACTGTCGGAAGCTGAAAAGCT----------------------------------------------------------------------------
dm3 chrUextra:706484-706684 + CTGCTGGGCAGAGCTGACGACAATATTCCTGTAATACGTTTTGTCC-----------------------------------ATAACTACGACAACGTGTAACCTAATGGGAGTACGAGAGTATGCGATGAGCTTGCGAAAACTGATGCGGTTCATCAGGCTATCGCAGGAAGAAAATCTTGACCGAATCTACAGAAACTGCAGAAGC-AAGATAAAACTATACAAGCGCA------------------TGACGGG
droEug1 scf7180000407006:11403-11649 + GACGTGGGTGGTGCTGA-----GAAGTACTGGAGTACTTCCTGGCGCCGAGGTATCAAGAGCAGTTGGGTGTGTAATTCGGACAACTGCGGCAAAATGAGGAGGAAC--CAACACGAACATACGCGATTGAGCTGAGGAAGCTAATGAGATTCACCGACCACTCAGAGGAGGAAAAGCTGGATAGGATATACAAAAACTGTCGGAGT-AAGATAAAACTGTATGCACGAAGATCAGGCTTTTCATCTCTAACGGA
droBia1 scf7180000302217:29013-29153 - AA-----------------------------------------------------------------------------------------------------------------GGATATACGGAATGAGGGTGATGAAATTAATGAGATTTACAGAGTATTCGGAAGAAGCCAAGATAGACCGAACATATAAGAACTGTAGGAAC-TAAATAAAAAAATACACAAGACGAGCAGGATTTAAAACACTGACGGA
droTak1 scf7180000411189:2908-3159 + TACTTGGAAGGAACTCAAGGAAGAACTGCTGGAATATTTCCTACCACCCAGATACCAGGAACAGGTGGAGACACAAATTGCACAGCTACGACAGCGGGAGACGGAAC--TAACAAGGGAATACGCAATGAACCTAAGGAAGTTAATGAGATTCACAGAGTATTCGGAAGAATCGAAGTTGGACCGTATATACAGAAATTGCAGAAGC-AAAATAAAACTCTATACTAGACGCTCAGGGTTCAAATCTTTAACGGA
droEle1 scf7180000489393:29342-29591 - GACATGGGAGGACCTCAGGGAGGAACTGTTAGAATACTTTTTGCCACCAAGATATCAGGAACAGTTGGAAACACAAATCACTCAACTACGGCAGCGGGAAACAGAAC--TAACAAGGGAATACGCAATGAACCTGAGGAAACTAATGAGATTTACAG--TATTCAGAAGAGACAAAGCTGGACCGGATATACAGAAACTGCAGAAGT-AAAATAAAGCTCTACACGAGACGGTCGGGATTTAAAACATTAACAGA
droRho1 scf7180000775236:611-863 - AACATGGACGCAACTCAGAACAGAACTGCTGGAATACTTTTTACCACCAAGGTATGAGGAACAGTTGGAGAATCAGATTGCACAGATGAAGCAGAGAGAAACGGAGC--CCGTAAGAGAGTACGCAATGGGACTTAGAAAACTGATGCAATTCACGAAACCCTCAGAAGAGGCCAAACTGGACCGAATATACAAAAACAGCAGGAGCTAAGATAAAGCTGTACGCTAGGAGGGCAGGATTCAACTCGTTGACAGA
droFic1 scf7180000449459:10434-10681 + ATCATGGAAACGTTTCAAAAC-GAATTTCTGGAATACTTCAAGCCAGCAGACCACGAGGAGAAAAAATGGAACA--ATAACACGCAGGCATCAGG-GAAAAACGAGC--CAGCAAAGGAGTTCGCACGAGAACTACGGAAAATTATGAGGTTCACAAAACTCACAGAGGACAGCAAACTAGAATGGATGTACAGGAACAGTCGCATA-GAATTGAAGCGTTGCGCCAAACGTGGGGAATGCAAATCATTAATGGA
droKik1 scf7180000301682:102-353 - AACATGGCAGCAACTGACATCAGAACTGCTGGAACATTTCCTACCTCCGAGATACGGAGAACAACTGGAGATCCAGATAGTGCAACTGAGACAGCGGGAAACAGAGC--CAGTAAGAGAGTACGCGATGAGTCTGAGGAAACTAATGCGGTTCACAAAACTAACGGAGGAGGAGAAACTCGACCGGGTGTACAAGAACTGCAGAAGC-AAAATAAAGCTGTATACGCGGAGAACGGGGTTCAACACCCTGACAGA
dp5 Unknown_singleton_2212:7102-7353 + ATCATGGGAGGATGCAAAGGTCGGACTAAAAGAGAACTTCATATCCCCCAGATACCAAGAGGAGCTGGCAAAACAAGTGGCAGAGCGAAAACAAGAGGAAACAGAAC--CAGTTCGAGACTATTTCCAAGAAATAAGGAAGTTAATGAGGTTTGGAACCTACACAGAGCAGGAAAAACTGGAAATAATATACCAGAACTGCCGGCTG-CCGCTTAAATTATACGTGAAGAGGAGAGAATTCCAAACGCTGTCAGA
droPer2 scaffold_4044:501-752 - ATCATGGGAGGATGCAAAGGTCGGACTAAAAGAGAACTTCATATCCCCCAGATACCAAGAGGAGCTGGCAAAACAAGTGGCAGAGCGAAAACAAGAGGGAACAGAAC--CAGTTCGAGACTATATCCAAGAAATAAGGAAGTTAATGAGGTTCGGAACCTACACAGAGCAGGAAAAACTGGAAATAATATACCAGAACTGCCGGCTG-CCGCTTAAATTATACGTGAAGAGGAGAGAATTCCAAACGCTGTCAGA
droMoj3 scaffold_6332:47505-47690 + TGAAT---------TCAAGAAAGAGTTCCTGGACTTTTTCCTGCCACCACAATACTTCGAGCGCCTTGAAGATCAAATACGGGCTCGTCGTCAGCGTCAGGGAGAGA--GATTTAAAGATTACCTTCTCGAGCTCAGGTTGCTGATACGTCATGCGAGGTACAGAGCGGCGCAAGAACTACACAGGGTGTACGAGAA----------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CTCATGGGTACAACTGCGAACGGAGCTACTGGAGTACTTCCTGC-ACCGAGGTATGGAGAACAGTTGGAAACCCAGTTAGGCCAGTTGAGGCAACGAGAGAACGAAC--CAGTAAGGGAGTACGCGATGAACCTGAGGAAGCTCATGAGGTTCACAAAGCTCACAGAGACGGAAAAACTCGACTGGGTGTACAAAAACTGTAGGAGC-TAACTTAAACTGTACACAAGGAGAAACGGATTAACAACGCTAACAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................TACGCGATGAACCTGAGGAAGCTCA..............................................................................................................25152.20330160010100015
........................................................................................................................TACGCGATGAACCTGAGGAAGCTC...............................................................................................................24151.0716014000020000
........................................................................................................................TACGCGATGAACCTGAGGAAGCT................................................................................................................23150.53806100010000
........................................................................................................................................................................................................TAGGAGC-TAACTTAAACTGTACACAAG...........................2720.50101000000000
.......................................................................................................................................................................................TGGGTGTACAAAAACTGTAGGAGC-...............................................24140.50707000000000
........................................................................................................................TACGCGATGAACCTGAGGAAGC.................................................................................................................22150.40606000000000
.........ACAACTGCGAACGGAGCTACTGGAG.............................................................................................................................................................................................................................2530.33100000000001
.TCATGGGTACAACTGCGAACGGAGC.....................................................................................................................................................................................................................................2530.33100100000000
...............GCGAACGGAGCTACTGGAGTACTTCC......................................................................................................................................................................................................................2630.33101000000000
....TGGGTACAACTGCGAACGGAGCTACT.................................................................................................................................................................................................................................2630.33100100000000
...........................................................AACAGTTGGAAACCCAGTTAGGCC............................................................................................................................................................................2470.29202000000000
..........................TACTGGAGTACTTCCTGC-ACCGAGGTA.........................................................................................................................................................................................................2750.20101000000000
.......................................................................................................................................................TCACAAAGCTCACAGAGACGGAAAAACT............................................................................2850.20101000000000
.......................................................................................................................................................TCACAAAGCTCACAGAGACGGAAAAAC.............................................................................2750.20101000000000
..................................TACTTCCTGC-ACCGAGGTATGGAGAAC.................................................................................................................................................................................................2750.20100100000000
.................................................................................................................................................TGAGGTTCACAAAGCTCACAGAGACGGA..................................................................................2850.20101000000000
......................................................................................................................................................TTCACAAAGCTCACAGAGACGGAAAA...............................................................................2650.20101000000000
......................................................................................TGAGGCAACGAGAGAACGAAC--CAGTA.............................................................................................................................................2660.17101000000000
.......................................................................................................................................................................................TGGGTGTACAAAAACTGTAGGAGC-T..............................................25120.17202000000000
......................................................................................TGAGGCAACGAGAGAACGAAC--CAGT..............................................................................................................................................2560.17101000000000
............................................................................................AACGAGAGAACGAAC--CAGTAAGGGAG.......................................................................................................................................2660.17100000100000
.............................................................................TAGGCCAGTTGAGGCAACGAGAGAAC........................................................................................................................................................2660.17101000000000
.........................................................................................................AC--CAGTAAGGGAGTACGCGATGAACC..........................................................................................................................2660.17100100000000
.............................................................................TAGGCCAGTTGAGGCAACGAGAGAACG.......................................................................................................................................................2760.17101000000000
...........................................................AACAGTTGGAAACCCAGTT.................................................................................................................................................................................1970.14101000000000
.....................................................................AACCCAGTTAGGCCAGTTGAGG....................................................................................................................................................................2270.14101000000000
.....................................................ATGGAGAACAGTTGGAAACCCAGT..................................................................................................................................................................................2470.14101000000000
......................................................TGGAGAACAGTTGGAAACCCAGTTAG...............................................................................................................................................................................2670.14101000000000
...........................................................AACAGTTGGAAACCCAGTTAGGCCAG..........................................................................................................................................................................2670.14101000000000
.....................................................................AACCCAGTTAGGCCAGTTGAGGC...................................................................................................................................................................2370.14101000000000
...........................................................AACAGTTGGAAACCCAGTTAGGCCA...........................................................................................................................................................................2570.14101000000000
.........................................................................................................................ACGCGATGAACCTGAGGAAGC.................................................................................................................21150.13202000000000
........................................................................................................................TACGCGATGAACCTGAGGA....................................................................................................................19150.13202000000000
............................................................................................................................................................................................GTACAAAAACTGTAGGAGC-TAAC...........................................23120.08101000000000
........................................................................................................................TACGCGATGAACCTGAGGAAGCTCAT.............................................................................................................26130.08101000000000
........................................................................................................................TACGCGATGAACCTGAGGAAGCTCATG............................................................................................................27130.08101000000000
.........................................................................................................................ACGCGATGAACCTGAGGAAGCTCAT.............................................................................................................25130.08101000000000
.....................................................................................................................................................................................ACTGGGTGTACAAAAACTGTAGGA..................................................24140.07101000000000
.......................................................................................................................................................................................TGGGTGTACAAAAACTGTAGGAG.................................................23140.07100000010000
...............................................................................................................................................................................AACTCGACTGGGTGTACAAAAACTG.......................................................25140.07101000000000
.............................................................................................................................................................................AAAACTCGACTGGGTGTACAAAAACTG.......................................................27140.07101000000000
........................................................................................................................................................................................GGGTGTACAAAAACTGTAGGAG.................................................22140.07101000000000
.....................................................................................................................................................................................ACTGGGTGTACAAAAACTGTAGGAGC-...............................................26140.07101000000000
........................................................................................................................TACGCGATGAACCTGAGGAAG..................................................................................................................21150.07101000000000
...............................................................................................................................TGAACCTGAGGAAGCTCA..............................................................................................................18150.07101000000000
........................................................................................................................TACGCGATGAACCTGAGGAAGT.................................................................................................................22150.07101000000000
droEre2
GACATAGGCACAACTAACAACAGAGCTACGAGAATACTTCCTGGCCCCGCGGTATGAGGAACAATTGGAGACTTGATTA-GTCACTTAAGACAGCGGGAAACCGAAC--CCGTAAGAGA---------GGAACTACGAAAGCTGATGCGATTTACGAGGTTTTCGGAAATGGAGAAACTCGACCGCATATACAGGAATTGCAGGAGT-ATTATAAAGCTGTACACGAGGAGGTCCGGGCTCGCATCGCTGACGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................ATGAGGAACAATTGGAGGGC......................................................................................................................................................................................20200.0511000000
droSec2
TACATGTGCGCAATTAACGGCGGAGCAATAGGAATACTTCCTGCAACCAAGATATAAGAAACAACTGTAGACCAGAATTAATCAGTTGAGACAGCGGGACACCGAAC--CCGTTAGGGAG-------TGGAACTGCGGAAACTAATGCGGTTTACGAGGTTATCGGAACAAGTGAAACTTGACCGCATAAACATGAAGGACCGCA-------------TATACACGAGGAGGTCCGG------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droSim2
CTCTTGGGTTCAATTGAGAACGGAACTGTTAGAGTACTTCTTACCACCGAGGTACGAGGAGCAGTTGCAAACCCAAATAGCACAGTTGAGACAGAGAGAGAACGAAC--CAGCAAGGGAATACGCGATGAGCCTGAGGAAGCTCATGAGGTTCACGAAACTGTCGGAAGCTGAAAAGCT----------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
dm3
CTGCTGGGCAGAGCTGACGACAATATTCCTGTAATACGTTTTGTCC-----------------------------------ATAACTACGACAACGTGTAACCTAATGGGAGTACGAGAGTATGCGATGAGCTTGCGAAAACTGATGCGGTTCATCAGGCTATCGCAGGAAGAAAATCTTGACCGAATCTACAGAAACTGCAGAAGC-AAGATAAAACTATACAAGCGCA------------------TGACGGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................AACTACGACAACGTGTAACCTAATG...................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GGGAGTACGAGAGTATGCGA................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................ATCAGGCTATCGCAGGGT....................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................GATGCGGTTCATCAGGAG..............................................................................................18130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
GACGTGGGTGGTGCTGA-----GAAGTACTGGAGTACTTCCTGGCGCCGAGGTATCAAGAGCAGTTGGGTGTGTAATTCGGACAACTGCGGCAAAATGAGGAGGAAC--CAACACGAACATACGCGATTGAGCTGAGGAAGCTAATGAGATTCACCGACCACTCAGAGGAGGAAAAGCTGGATAGGATATACAAAAACTGTCGGAGT-AAGATAAAACTGTATGCACGAAGATCAGGCTTTTCATCTCTAACGGASizeHit CountTotal NormTotal
No Reads
droBia1
AA-----------------------------------------------------------------------------------------------------------------GGATATACGGAATGAGGGTGATGAAATTAATGAGATTTACAGAGTATTCGGAAGAAGCCAAGATAGACCGAACATATAAGAACTGTAGGAAC-TAAATAAAAAAATACACAAGACGAGCAGGATTTAAAACACTGACGGASizeHit CountTotal NormTotal
No Reads
droTak1
TACTTGGAAGGAACTCAAGGAAGAACTGCTGGAATATTTCCTACCACCCAGATACCAGGAACAGGTGGAGACACAAATTGCACAGCTACGACAGCGGGAGACGGAAC--TAACAAGGGAATACGCAATGAACCTAAGGAAGTTAATGAGATTCACAGAGTATTCGGAAGAATCGAAGTTGGACCGTATATACAGAAATTGCAGAAGC-AAAATAAAACTCTATACTAGACGCTCAGGGTTCAAATCTTTAACGGASizeHit CountTotal NormTotal
No Reads
droEle1
GACATGGGAGGACCTCAGGGAGGAACTGTTAGAATACTTTTTGCCACCAAGATATCAGGAACAGTTGGAAACACAAATCACTCAACTACGGCAGCGGGAAACAGAAC--TAACAAGGGAATACGCAATGAACCTGAGGAAACTAATGAGATTTACAG--TATTCAGAAGAGACAAAGCTGGACCGGATATACAGAAACTGCAGAAGT-AAAATAAAGCTCTACACGAGACGGTCGGGATTTAAAACATTAACAGASizeHit CountTotal NormTotal
No Reads
droRho1
AACATGGACGCAACTCAGAACAGAACTGCTGGAATACTTTTTACCACCAAGGTATGAGGAACAGTTGGAGAATCAGATTGCACAGATGAAGCAGAGAGAAACGGAGC--CCGTAAGAGAGTACGCAATGGGACTTAGAAAACTGATGCAATTCACGAAACCCTCAGAAGAGGCCAAACTGGACCGAATATACAAAAACAGCAGGAGCTAAGATAAAGCTGTACGCTAGGAGGGCAGGATTCAACTCGTTGACAGASizeHit CountTotal NormTotal
No Reads
droFic1
ATCATGGAAACGTTTCAAAAC-GAATTTCTGGAATACTTCAAGCCAGCAGACCACGAGGAGAAAAAATGGAACA--ATAACACGCAGGCATCAGG-GAAAAACGAGC--CAGCAAAGGAGTTCGCACGAGAACTACGGAAAATTATGAGGTTCACAAAACTCACAGAGGACAGCAAACTAGAATGGATGTACAGGAACAGTCGCATA-GAATTGAAGCGTTGCGCCAAACGTGGGGAATGCAAATCATTAATGGASizeHit CountTotal NormTotal
No Reads
droKik1
AACATGGCAGCAACTGACATCAGAACTGCTGGAACATTTCCTACCTCCGAGATACGGAGAACAACTGGAGATCCAGATAGTGCAACTGAGACAGCGGGAAACAGAGC--CAGTAAGAGAGTACGCGATGAGTCTGAGGAAACTAATGCGGTTCACAAAACTAACGGAGGAGGAGAAACTCGACCGGGTGTACAAGAACTGCAGAAGC-AAAATAAAGCTGTATACGCGGAGAACGGGGTTCAACACCCTGACAGASizeHit CountTotal NormTotal
No Reads
dp5
ATCATGGGAGGATGCAAAGGTCGGACTAAAAGAGAACTTCATATCCCCCAGATACCAAGAGGAGCTGGCAAAACAAGTGGCAGAGCGAAAACAAGAGGAAACAGAAC--CAGTTCGAGACTATTTCCAAGAAATAAGGAAGTTAATGAGGTTTGGAACCTACACAGAGCAGGAAAAACTGGAAATAATATACCAGAACTGCCGGCTG-CCGCTTAAATTATACGTGAAGAGGAGAGAATTCCAAACGCTGTCAGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................TTATACGTGAAGAGGAGAGAATTC..............2433.671101000000100
................................................................................................................................................................ACACAGAGCAGGAAAAACTGGAAA.......................................................................2472.862001300007000
....................................................................................GCGAAAACAAGAGGAAACAGAAC--CAG...............................................................................................................................................2622.5050000000050
.........................................................................................................................................................................................................................TTATACGTGAAGAGGAGAGAATT...............2332.3370500000200
................................................................................................................................................................ACACAGAGCAGGAAAAACTGGAA........................................................................2371.57110900002000
................................................................................................................................................................ACACAGAGCAGGAAAAACTGGA.........................................................................2291.561401000004000
.........................................................................................................................................................................................................................TTATACGTGAAGAGGAGAGAAT................2231.3340400000000
..............................AGAGAACTTCATATCCCCCAGATACC.......................................................................................................................................................................................................2661.3380300000140
..................................................................................................................CGAGACTATTTCCAAGAAATAAGGAA...................................................................................................................2611.0010100000000
...........................AAAAGAGAACTTCATATCCCCCAG............................................................................................................................................................................................................2461.0060600000000
...................................................................................................................GAGACTATTTCCAAGAAATAAGG.....................................................................................................................2311.0010100000000
..............................AGAGAACTTCATATCCCCCAGATA.........................................................................................................................................................................................................2460.8350300000110
...........................................................................................................................................................................................TATACCAGAACTGCCGGCTG-CCGCTT.........................................2630.6720200000000
.........................................................................................................................................................................................................................TTATACGTGAAGAGGAGAGAA.................2130.6720200000000
.........................................................................................................................................................................................................................TTATACGTGAAGAGGAGAGAATTCC.............2530.6720000000020
................................................................................................................................................................ACACAGAGCAGGAAAAACTGGAAAT......................................................................2570.5740300001000
................................................................................................................................................................ACACAGAGCAGGAAAAACTGG..........................................................................2190.5650200003000
..............................AGAGAACTTCATATCCCCCAGA...........................................................................................................................................................................................................2260.5030200000010
...............................................................................GCAGAGCGAAAACAAGAGGAAA..........................................................................................................................................................2220.5010100000000
................................................................................CAGAGCGAAAACAAGAGGAAACA........................................................................................................................................................2320.5010100000000
...............................................................................GCAGAGCGAAAACAAGAGGAAACA........................................................................................................................................................2420.5010100000000
................................................................................CAGAGCGAAAACAAGAGGAAACAGA......................................................................................................................................................2520.5010100000000
...................................................................................AGCGAAAACAAGAGGAAACAGAAC--..................................................................................................................................................2420.5010100000000
....................................................................................GCGAAAACAAGAGGAAACAGAAC--C.................................................................................................................................................2420.5010000000010
...................................................................................AGCGAAAACAAGAGGAAACAGAAC--C.................................................................................................................................................2520.5010100000000
...............................GAGAACTTCATATCCCCCAGATAC........................................................................................................................................................................................................2460.5030210000000
...................................................................................AGCGAAAACAAGAGGAAACAGAA.....................................................................................................................................................2320.5010000000100
................................................................................CAGAGCGAAAACAAGAGGAAACAG.......................................................................................................................................................2420.5010100000000
..............................AGAGAACTTCATATCCCCCAGAT..........................................................................................................................................................................................................2360.5030000000300
...............AAAGGTCGGACTAAAAGA..............................................................................................................................................................................................................................1870.4330000000300
...................GTCGGACTAAAAGAGAACTTCAT.....................................................................................................................................................................................................................2350.4020200000000
..........................................................................................................................................................................................................................TATACGTGAAGAGGAGAGAATT...............2280.3830300000000
.....................CGGACTAAAAGAGAACTTCATATC..................................................................................................................................................................................................................2460.3320200000000
.............................................................................................................................................................................................TACCAGAACTGCCGGCTG-CCGCTT.........................................2430.3310100000000
......................................................................................................................................................................................................................AAATTATACGTGAAGAGGAGAGAA.................2430.3310100000000
...........................AAAAGAGAACTTCATATCCCCCA.............................................................................................................................................................................................................2360.3320200000000
.......................GACTAAAAGAGAACTTCATATCCCCC..............................................................................................................................................................................................................2660.3320200000000
...........................AAAAGAGAACTTCATATCCCCCAGA...........................................................................................................................................................................................................2560.3320200000000
.........................................................................................................................................................................................................................TTATACGTGAAGAGGAGA....................1830.3310100000000
..................................................................GGCAAAACAAGTGGCAGAGCGAAAA....................................................................................................................................................................2530.3310100000000
.......................GACTAAAAGAGAACTTCATATCC.................................................................................................................................................................................................................2360.3320200000000
.................................................................TGGCAAAACAAGTGGCAGAGCGAA......................................................................................................................................................................2430.3310100000000
........................................................................................................................................................................................TAATATACCAGAACTGCCGGCTG-...............................................2390.3330100000020
.................................................................TGGCAAAACAAGTGGCAGAGCGAAA.....................................................................................................................................................................2530.3310000000010
..............................AGAGAACTTCATATCCCCCAGATAC........................................................................................................................................................................................................2560.3320100000100
..............................AGAGAACTTCATATCCCCCAGATACCA......................................................................................................................................................................................................2760.3320100000010
...........................AAAAGAGAACTTCATATCCCC...............................................................................................................................................................................................................2160.3320200000000
.........................................................................................................................................................................................................................TTATACGTGAAGAGGAGAGAATTCCAA...........2730.3310100000000
.................................................................TGGCAAAACAAGTGGCAGAGCGAAAA....................................................................................................................................................................2630.3310100000000
...................................................................GCAAAACAAGTGGCAGAGCGA.......................................................................................................................................................................2140.2510100000000
..........................................................................................................................................................................................................................TATACGTGAAGAGGAGAGAATTCC.............2480.2520000000200
..........................................................................................................................................................................................................................TATACGTGAAGAGGAGAGAATTC..............2380.2520200000000
...........................................................................................................................................................................................TATACCAGAACTGCCGGCTG-...............................................2090.2220200000000
........................................................................................................................................................................................TAATATACCAGAACTGCCGGCTG-C..............................................2490.2220000000020
...........................................................................................................................................................................................TATACCAGAACTGCCGGCT.................................................19100.2020200000000
....................................................TACCAAGAGGAGCTGGCAAAACAA...................................................................................................................................................................................2450.2010000000010
....................TCGGACTAAAAGAGAACTTCAT.....................................................................................................................................................................................................................2250.2010100000000
..................................................GATACCAAGAGGAGCTGGCAAAA......................................................................................................................................................................................2350.2010100000000
....TGGGAGGATGCAAAGGTCGGT......................................................................................................................................................................................................................................2150.2010000000100
...........................................TCCCCCAGATACCAAGAGGAGCTGGCA.........................................................................................................................................................................................2750.2010100000000
....TGGGAGGATGCAAAGGTCGGACT....................................................................................................................................................................................................................................2350.2010100000000
....................................................TACCAAGAGGAGCTGGCAAAACAAG..................................................................................................................................................................................2550.2010100000000
.......GAGGATGCAAAGGTCGGACTAAAAG...............................................................................................................................................................................................................................2550.2010000000010
.................................GAACTTCATATCCCCCAGATACCAAG....................................................................................................................................................................................................2650.2010100000000
....................TCGGACTAAAAGAGAACTTCATA....................................................................................................................................................................................................................2350.2010100000000
..............................AGAGAACTTCATATCCCCCAGATACCAAG....................................................................................................................................................................................................2950.2010000000010
.....................................................ACCAAGAGGAGCTGGCAAAACAAG..................................................................................................................................................................................2450.2010100000000
........................................................................................................................................................................................TAATATACCAGAACTGCCGG...................................................20110.1820000000200
.................................GAACTTCATATCCCCCAGATACCA......................................................................................................................................................................................................2460.1710100000000
...........................AAAAGAGAACTTCATATCCCCA..............................................................................................................................................................................................................2260.1710100000000
..........................TAAAAGAGAACTTCATATCCCCCAGA...........................................................................................................................................................................................................2660.1710000000100
.......................GACTAAAAGAGAACTTCATATCCC................................................................................................................................................................................................................2460.1710100000000
........................ACTAAAAGAGAACTTCATATCCC................................................................................................................................................................................................................2360.1710100000000
.......................GACTAAAAGAGAACTTCATATCCCCCAG............................................................................................................................................................................................................2860.1710100000000
...........................AAAAGAGAACTTCATATCCCCC..............................................................................................................................................................................................................2260.1710100000000
.................................GAACTTCATATCCCCCAGAT..........................................................................................................................................................................................................2060.1710100000000
.......................GACTAAAAGAGAACTTCATATC..................................................................................................................................................................................................................2260.1710000000010
.................................GAACTTCATATCCCCCAGATAC........................................................................................................................................................................................................2260.1710100000000
...........................AAAAGAGAACTTCATATCCCCCAGAT..........................................................................................................................................................................................................2660.1710100000000
.............................AAGAGAACTTCATATCCCCCAGATACC.......................................................................................................................................................................................................2760.1710100000000
..............................AGAGAACTTCATATCCCCCAGATAA........................................................................................................................................................................................................2560.1710100000000
.....................CGGACTAAAAGAGAACTTCATATCCC................................................................................................................................................................................................................2660.1710010000000
.............................AAGAGAACTTCATATCCCCCAGATAC........................................................................................................................................................................................................2660.1710100000000
.....................CGGACTAAAAGAGAACTTCATAT...................................................................................................................................................................................................................2360.1710100000000
......................GGACTAAAAGAGAACTTCATA....................................................................................................................................................................................................................2160.1710100000000
........................ACTAAAAGAGAACTTCATATCC.................................................................................................................................................................................................................2260.1710100000000
.......................GACTAAAAGAGAACTTCATA....................................................................................................................................................................................................................2060.1710100000000
.....................CGGACTAAAAGAGAACTTCATATCC.................................................................................................................................................................................................................2560.1710100000000
..............................AGAGAACTTCATATCCCCCAGATAG........................................................................................................................................................................................................2560.1710000000100
.............................AAGAGAACTTCATATCCCCCAGAT..........................................................................................................................................................................................................2460.1710100000000
............................AAAGAGAACTTCATATCCCCCA.............................................................................................................................................................................................................2260.1710100000000
................................................................................................................................................................ACACAGAGCAGGAAAAACTGGAAATAA....................................................................2770.1410100000000
................................................................................................................................................................ACACAGAGCAGGAAAAACTGGAAATA.....................................................................2670.1410100000000
................AAGGTCGGACTAAAAGA..............................................................................................................................................................................................................................1770.1410000000100
................................................................................................................................................................ACACAGAGCAGGAAAAACTGGAAATC.....................................................................2670.1410000001000
...............................................................................................................................................................TACACAGAGCAGGAAAAACTGGAAA.......................................................................2570.1410100000000
.................................................................................................................................................................CACAGAGCAGGAAAAACTGGAAA.......................................................................2370.1410100000000
............................................................................................................................................................................................................................TACGTGAAGAGGAGAGAATT...............2080.1310100000000
..........................................................................................................................................................................................................................TATACGTGAAGAGGAGAGAATTCCAAA..........2780.1310000000010
...........................AAAAGAGAACTTCATATCC.................................................................................................................................................................................................................1980.1310100000000
....................................................................................................................................................................................................................................GAGGAGAGAATTCCAAACGCTG.....2290.1110000000100
...........................................................................................................................................................................................TATACCAGAACTGCCGGCTG-C..............................................2190.1110100000000
...........................................................................................................................................................................................TATACCAGAACTGCCGGCTG-CCG............................................2390.1110100000000
...........................................................................................................................................................................................TATACCAGAACTGCCGGCTG-CCGC...........................................2490.1110100000000
...........................................................................................................................................................................................................................ATACGTGAAGAGGAGAGAAAAA..............2290.1110100000000
................................................................................................................................................................ACACAGAGCAGGAAAAACT............................................................................1990.1110100000000
.................................................................................................................................................................CACAGAGCAGGAAAAACTGGA.........................................................................2190.1110100000000
..............................................................................................................................................................................................ACCAGAACTGCCGGCTG-CCG............................................2090.1110100000000
.................................................................................................................................................................CACAGAGCAGGAAAAACTGG..........................................................................2090.1110100000000
..........................................................................................................................................................................................ATATACCAGAACTGCCGGCTG-CCC............................................2490.1110000000010
..................................................................................................................................................................................TGGAAATAATATACCAGAACTGCCGGC..................................................2790.1110100000000
................................................................................................................................................................ACACAGAGCAGGAAAAACTG...........................................................................2090.1110100000000
...................................................................................................................................................................................................................................AGAGGAGAGAATTCCAAACGCTGTC...2590.1110100000000
...........................................................................................................................................................................................TATACCAGAACTGCCGGCC.................................................19100.1010100000000
droPer2
ATCATGGGAGGATGCAAAGGTCGGACTAAAAGAGAACTTCATATCCCCCAGATACCAAGAGGAGCTGGCAAAACAAGTGGCAGAGCGAAAACAAGAGGGAACAGAAC--CAGTTCGAGACTATATCCAAGAAATAAGGAAGTTAATGAGGTTCGGAACCTACACAGAGCAGGAAAAACTGGAAATAATATACCAGAACTGCCGGCTG-CCGCTTAAATTATACGTGAAGAGGAGAGAATTCCAAACGCTGTCAGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................GCAGAGCGAAAACAAGAGGGAA..........................................................................................................................................................2211.001000001
..................................................................................................................CGAGACTATATCCAAGAAATAAGG.....................................................................................................................24200.204040000
.................................GAACTTCATATCCCCCAGATACC.......................................................................................................................................................................................................23120.172020000
........................................................AAGAGGAGCTGGCAAAACAAGTGGC..............................................................................................................................................................................2560.171000001
...........................................................AGGAGCTGGCAAAACAAGTG................................................................................................................................................................................2060.171000001
.......................................................CAAGAGGAGCTGGCAAAACAAGTG................................................................................................................................................................................2460.171000001
..................................................................................................................................................................................................................GCTTAAATTATACGTGAAGAGGAG.....................2460.171010000
.....................................................................................................................................................................................................................TAAATTATACGTGAAGAGGAGAGAAA................2660.171000001
..................................................................................................................................................................................................................GCTTAAATTATACGTGAAGAGGAGA....................2560.171010000
ATCATGGGAGGATGCAAAGGTCGG.......................................................................................................................................................................................................................................2480.131010000
............TGCAAAGGTCGGACTAAAAGAGAACTTC.......................................................................................................................................................................................................................2880.131000001
.......GAGGATGCAAAGGTCGGACTAAAAGA..............................................................................................................................................................................................................................2680.131000001
..................................................................................................................................................GAGGTTCGGAACCTACACAGAGCA.....................................................................................24180.112020000
..............................AGAGAACTTCATATCCCCCAGAT..........................................................................................................................................................................................................23120.081100000
..........................TAAAAGAGAACTTCATATCCCCCA.............................................................................................................................................................................................................24120.081010000
......................GGACTAAAAGAGAACTTCATATCCC................................................................................................................................................................................................................25120.081010000
...........................AAAAGAGAACTTCATATCCCC...............................................................................................................................................................................................................21130.081010000
..........................................................................................................................................................................................................................TATACGTGAAGAGGAGAGA..................19140.071000001
..................................................................................................................CGAGACTATATCCAAGAAATAAGGAAG..................................................................................................................27150.071000001
..........................................................................................................C--CAGTTCGAGACTATATCC................................................................................................................................19170.061100000
.................................................................................................................................................TGAGGTTCGGAACCTACACAGAGCAGGAA.................................................................................29170.061000001
..................................................................................................................................................GAGGTTCGGAACCTACACAGAGCAGG...................................................................................26170.061010000
..................................................................................................................................................GAGGTTCGGAACCTACACAGAGC......................................................................................23180.061010000
..................................................................................................................................................GAGGTTCGGAACCTACACAGAGCAG....................................................................................25180.061010000
..............................................................................................................................................................CTACACAGAGCAGGAAAAACTGGA.........................................................................24190.051000001
..................................................................................................................CGAGACTATATCCAAGAAATAAGGA....................................................................................................................25200.051010000
................................................................................................................TTCGAGACTATATCCAAGAAATAAGGA....................................................................................................................27200.051000001
................................................................................................................................................................ACACAGAGCAGGAAAAACTGGAA........................................................................23200.051000001
................................................................................................................TTCGAGACTATATCCAAGAAATAAG......................................................................................................................25200.051010000
....................................................................................................................................................................AGAGCAGGAAAAACTGGAAATAATA..................................................................25200.051010000
................................................................................................................TTCGAGACTATATCCAAGAAATA........................................................................................................................23200.051010000
..................................................................................................................................................................................TGGAAATAATATACCAGAACTGCCGG...................................................26200.051010000
...................................................................................................................GAGACTATATCCAAGAAATAAGG.....................................................................................................................23200.051010000
droMoj3
TGAAT---------TCAAGAAAGAGTTCCTGGACTTTTTCCTGCCACCACAATACTTCGAGCGCCTTGAAGATCAAATACGGGCTCGTCGTCAGCGTCAGGGAGAGA--GATTTAAAGATTACCTTCTCGAGCTCAGGTTGCTGATACGTCATGCGAGGTACAGAGCGGCGCAAGAACTACACAGGGTGTACGAGAA----------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................CTCGAGCTCAGGTTGCTGATACG..........................................................................................................23181.78323200000
..............................................................................................................................CTCGAGCTCAGGTTGCTGATACGTCA.......................................................................................................26180.94171700000
..............................................................................................................................CTCGAGCTCAGGTTGCTGATACGTC........................................................................................................25180.78141300010
..............................................................................................................................CTCGAGCTCAGGTTGCTGATACGT.........................................................................................................24180.5610900010
....................................................................AAGATCAAATACGGGCTCGTCGTCA..................................................................................................................................................................2520.501100000
......................................................................GATCAAATACGGGCTCGTCGTCAGC................................................................................................................................................................2520.501100000
..................................................................TGAAGATCAAATACGGGCTCGTCGTC...................................................................................................................................................................2620.501100000
......................................................................GATCAAATACGGGCTCGTCGTCA..................................................................................................................................................................2320.501100000
..................................................AATACTTCGAGCGCCTTGAAGA.......................................................................................................................................................................................2230.331100000
...............................................................................................................................TCGAGCTCAGGTTGCTGATACG..........................................................................................................22180.224400000
..............................................................................................................................CTCGAGCTCAGGTTGCTGATAC...........................................................................................................22180.224200002
...............................................................................................................................TCGAGCTCAGGTTGCTGATACGTC........................................................................................................24180.061100000
..............................................................................................................................CTCGAGCTCAGGTTGCTGATACGTCC.......................................................................................................26180.061100000
..............................................................................................................................CTCGAGCTCAGGTTGCTGA..............................................................................................................19180.061100000
..............................................................................................................................CTCGAGCTCAGGTTGCTG...............................................................................................................18180.061000010
...............................................................................................................................TCGAGCTCAGGTTGCTGATACGTT........................................................................................................24180.061100000

Generated: 05/18/2015 at 12:35 AM