ID:

dya_1269

 Coordinate:

chr3h:107981-108131 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.4 -34.8 -34.8

Flybase annnotation

exon [dyak_GLEANR_6432:2]; CDS [Dyak\GE22701-cds]; intron [Dyak\GE22701-in]

No Repeatable elements found

mature
  1. 3L:23945207-23945231 -
  2. dya_1269  chr3h:108092-108116 +
  3. v2_chrUn_534:93373-93397 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCGGGCATGGATGCGATCCTGACACAAAGGCCGGCTAGGTTTGGCCAAGATGACGGCAGCCACCGTCAAAAAGGCGGTGTCGACGAGACGGCTGAGCACATCATTTTTAATTGCCAGCGATTCGACCGCGACAGGGAAGGCTTCATGGAGGACGGACCCTTCTACCC
**************************************************................................((((.(((..((((...))))..........))).))))...(((((.(((((((...(((((((((((.....))))))(((.....))))))))......))))))).....)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 GSM1528802
follicle cells		 M056
embryo
 M026
head
 V058
head
 V120
male body		 V052
head
 V046
embryo
...........................................................................................................................................................AGGCGCTGTCGACGAGTCGG............................................................................ 20 2 1 5.00 5 4 0 0 1 0 0 0 0
..........................................................................................................................................................GAGGCGCTGTCGACGAGTCGG............................................................................ 21 3 1 3.00 3 3 0 0 0 0 0 0 0
............................................................................................................................................................GGCGCTGTCGACGAGTCGG............................................................................ 19 2 3 2.67 8 7 0 0 1 0 0 0 0
.............................................................................................................................................................................................................TCGACCGCGACAGGGAAGGCTT........................ 22 0 6 2.33 14 0 14 0 0 0 0 0 0
...........................................................................................................................................................AGGCGCTGTCGACGAGTCG............................................................................. 19 2 2 2.00 4 3 0 0 0 0 1 0 0
.......................................................................................................................................................................................................AGCGATTCGACCGCGACAGGGAAGGC.......................... 26 0 6 1.50 9 6 0 3 0 0 0 0 0
...................................................................................................................................................................................................TGCCAGCGATTCGACCGCGACAGGGAAT............................ 28 1 9 1.22 11 0 11 0 0 0 0 0 0
.............................................................................................................AAGGGCCGGCGAGGTATGGCC......................................................................................................................... 21 3 1 1.00 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................AGGCGCTGTCGACGAGTCGGG........................................................................... 21 3 3 1.00 3 0 0 0 1 0 2 0 0
.............................................................................................................AACGGCCGGGTAGGTATGGCC......................................................................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 1 0
.............................................................................................................................................................GCGCTGTCGACGAGTCGGGT.......................................................................... 20 3 5 1.00 5 5 0 0 0 0 0 0 0
............................................................................................................................................................GGCGCTGTCGACGAGTCGGGT.......................................................................... 21 3 2 1.00 2 2 0 0 0 0 0 0 0
............................................................................................................................................................GGCGCTGTCGACGAGTCGGG........................................................................... 20 3 8 1.00 8 7 0 0 0 0 0 1 0
...................................................................................................................................................................................................TGCCAGCGATTCGACCGCGACAGGG............................... 25 0 6 0.83 5 0 5 0 0 0 0 0 0
.............................................................................................................................................................GCGCTGTCGACGAGTCGG............................................................................ 18 2 11 0.82 9 9 0 0 0 0 0 0 0
..................................................................................................................................................................GTCGACGAGACGGCTGAGCACATCAC............................................................... 26 1 13 0.69 9 0 9 0 0 0 0 0 0
...........................................................................................................................................................AGGCGCTGTCGACGAGTC.............................................................................. 18 2 3 0.67 2 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TCGACCGCGACAGGGACGGCTT........................ 22 1 6 0.67 4 0 4 0 0 0 0 0 0
.................................................................................................................................................................................GAGCACATCATTTTTGATTGCCGGA................................................. 25 3 12 0.67 8 0 8 0 0 0 0 0 0
...........................................................................................................................................................AGGCGCTGTCGACGAGTCGGGT.......................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................................................................GGCGCTGTCGACGAGTCG............................................................................. 18 2 6 0.50 3 2 0 0 1 0 0 0 0
.......................................................................................................................................................................................................AGCGATTCGACCGCGACAGGG............................... 21 0 6 0.33 2 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TCGACCGCGACAGGGAAGGCTTCATG.................... 26 0 6 0.33 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGCCAGCGATTCGCCCGCGACAGGG............................... 25 1 6 0.33 2 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................................TCGACCGCGACAGGGAAGGCTTCAT..................... 25 0 6 0.33 2 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................TTCGACCGCGACAGGGAAGGCTTCATG.................... 27 0 6 0.33 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGCGATTCGACCGCGACAGGGAAG............................ 24 0 6 0.33 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGCCAGCGATTCGACCGCGCCAGGGAA............................. 27 1 6 0.33 2 0 2 0 0 0 0 0 0
...................................................................................................................................................................................................TGCCAGCGATTCGACCGCGACAGGGAA............................. 27 0 6 0.33 2 0 2 0 0 0 0 0 0
...................................................................................................................................................................................................TGCCAGCGATTCGGCCGCGACAGGGAA............................. 27 1 6 0.33 2 0 2 0 0 0 0 0 0
..........................................................................................................................................................................................................GATTCGACCGCGACAGGGAAGGCT......................... 24 0 6 0.33 2 0 0 2 0 0 0 0 0
.......................................................................................................................................................................................................AGCGATTCGACCGCGACAGGGAAGG........................... 25 0 6 0.33 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................GAGGCGCTGTCGACGAGTCG............................................................................. 20 3 6 0.33 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................TGTCGACGAGACGGCTGAGCACATC................................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................TCGACGAGACGGCTGAGCACATCATT.............................................................. 26 0 13 0.31 4 3 0 0 1 0 0 0 0
..................................................................................................................................................................GTCGACGAGACGGCTGAGCACATC................................................................. 24 0 13 0.31 4 3 0 0 0 0 0 0 1
...................................................................................................................................................................................................TGCCAGCGATTCGACCGCGAAAGGG............................... 25 1 7 0.29 2 0 2 0 0 0 0 0 0
.............................................................................................................AAAGGCCGGCTAGGACTGGCC......................................................................................................................... 21 2 4 0.25 1 0 0 0 0 1 0 0 0
..................................................................................................................................................................GTCGACGAGACGGCTGCGCACATCAC............................................................... 26 2 13 0.23 3 0 3 0 0 0 0 0 0
...................................................................................................................................................................................................TGCCAGCGATTCGACCGCGCCAGGG............................... 25 1 6 0.17 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................TCGACCGCGACAGGGAAGGCTTCATT.................... 26 1 6 0.17 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................TTTTTAATTGCCAGCGATTCGACCGC...................................... 26 0 6 0.17 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................TGTTTAATTGCCAGCGATTCGACCGC...................................... 26 1 6 0.17 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................CATTTTTAATTGCCAGCGATTCGAC......................................... 25 0 6 0.17 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................TAATTGCCAGCGATTCGACCGCGAC................................... 25 0 6 0.17 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTCGACCGCGACAGGGAAGAC.......................... 21 1 6 0.17 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................TCATTTTTAATTGCCAGCGATTCGACC........................................ 27 0 6 0.17 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................TTGCCAGCGATTCGACCGCGACAG................................. 24 0 6 0.17 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ATCGATTCGACCGCGACAGGGAAGG........................... 25 1 6 0.17 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................TTGCCAGCGATTCGACCGCGACAGTTT.............................. 27 3 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................TCATTTTTAATTGCCAGCGATTCGAC......................................... 26 0 6 0.17 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................ATCATTTTTACTTGCCAGCGATTCGAC......................................... 27 1 6 0.17 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................TTTAATTGCCAGCGATTCGACCGCGAC................................... 27 0 6 0.17 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................TGCCAGCGATTCTACCGCGACAGGG............................... 25 1 6 0.17 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................AGCGATTCGACCGCGACAGGGA.............................. 22 0 6 0.17 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TCGACCGCGACAGGGAAGGCTTCA...................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................GCCAGCGATTCGACCGCGACAGGGG.............................. 25 1 6 0.17 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................TCGACCGCGACAGGGAAGGCT......................... 21 0 6 0.17 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................TTTTAATTGCCAGCGATTCGACCG....................................... 24 0 6 0.17 1 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................GATTCGACCGCGACAGGGAAGGC.......................... 23 0 6 0.17 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................TGCGAGCGATTCGACCGCGCCAGGGAA............................. 27 2 6 0.17 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................GTCGACGAGACGGGTGAGCACATCAC............................................................... 26 2 13 0.15 2 0 2 0 0 0 0 0 0
.......................................................................................................................................................................................................AGCGATTCGACCGCGACAGGAAGGC........................... 25 3 7 0.14 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................TGCCAGCGATTCTACCGCGACAGGGAAT............................ 28 2 9 0.11 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................TGCCAGCGATTCGACAGCGACAGGGAAT............................ 28 2 9 0.11 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................GCGCTGTCGACGAGTCGGG........................................................................... 19 3 20 0.10 2 1 0 0 0 0 1 0 0
..................................................................................................................................................................................AGCACATCATTTTTAATTGCCAGCGAT.............................................. 27 0 11 0.09 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................TGAGCACATCATTTTTAATTGCCAGCGAT.............................................. 29 0 11 0.09 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................GCGACAGGGAAGGCTTCATGGAGGA............... 25 0 12 0.08 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGACAGGGAAGGCTTCATGGAGG................ 23 0 12 0.08 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................GCGACAGGGAAGGCTTCATGGAGG................ 24 0 12 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGCGACAGGGAAGGCTTCATGGAG................. 24 0 12 0.08 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGACGGCTGAGCACATCATTTT............................................................ 26 0 13 0.08 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................GACGAGACGGCAGAGCACATCATT.............................................................. 24 1 13 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................GTCGACGAGACGGCTGAGCACATCAT............................................................... 26 0 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................TCGACGAGACGGCTGAGCACATCA................................................................ 24 0 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................TCGACGAGACGGCTGAGCACATCAT............................................................... 25 0 13 0.08 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGACGGCTGAGCACATCATT.............................................................. 24 0 13 0.08 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................GACGAGACGGCTGAGCACATCATTTTT........................................................... 27 0 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCGACAGGGAAGGCTTCATGGA.................. 22 0 13 0.08 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................CGACGAGAAGGCTGAGCACATCATT.............................................................. 25 1 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................TCGACGAGACGGCGGAGCACATC................................................................. 23 1 14 0.07 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................GTCGACGAGACGGCTGAGCAC.................................................................... 21 0 17 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GGGAAGCCTTGATGGACGAC.............. 20 3 20 0.05 1 0 0 0 0 1 0 0 0
..............................................................................................................................................................CGCTGTCGACGAGTCGGGT.......................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0

Anti-sense strand reads

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGCCCGTACCTACGCTAGGACTGTGTTTCCGGCCGATCCAAACCGGTTCTACTGCCGTCGGTGGCAGTTTTTCCGCCACAGCTGCTCTGCCGACTCGTGTAGTAAAAATTAACGGTCGCTAAGCTGGCGCTGTCCCTTCCGAAGTACCTCCTGCCTGGGAAGATGGG
**************************************************................................((((.(((..((((...))))..........))).))))...(((((.(((((((...(((((((((((.....))))))(((.....))))))))......))))))).....)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 GSM1528802
follicle cells		 V046
embryo
 V120
male body		 V052
head
 V058
head
 M026
head
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAAGTACC................... 25 0 12 26.08 313 172 95 31 11 2 1 0 1
......................................................................................................................................................................................GTAGTAAAAATTAACGGTCGCTAAGCT.......................................... 27 0 6 19.17 115 76 10 26 2 1 0 0 0
..............................................................................................................................................................................................................GCTGGCGCTGTCCCTTCCGAAGTACC................... 26 0 6 7.17 43 29 10 0 3 1 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAGTACC................... 23 0 13 6.23 81 70 5 0 6 0 0 0 0
........................................................................................................................................................................................AGTAAAAATTAACGGTCGCTAAGCT.......................................... 25 0 6 5.67 34 7 0 26 1 0 0 0 0
................................................................................................................................................................................................................TGGCGCTGTCCCTTCCGAAGTACC................... 24 0 12 4.33 52 27 13 5 5 2 0 0 0
.............................................................................................................................................................................................................AGCTGGCGCTGTCCCTTCCGAAGTACC................... 27 0 6 3.83 23 16 2 4 0 1 0 0 0
................................................................................................................................................................................................................TGGCGCTGTCCCTTCCGAAGTACCT.................. 25 0 12 3.08 37 11 2 24 0 0 0 0 0
..................................................................................................................................................................................................................GCGCTGTCCCTTCCGAAGTACCTCCT............... 26 0 12 2.50 30 21 0 9 0 0 0 0 0
...................................................................................................................................................................................CGTGTAGTAAAAATTAACGGTCGCT............................................... 25 0 12 2.33 28 10 13 0 5 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAGTACCTCCT............... 27 0 12 2.08 25 22 1 0 2 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAAGTACCT.................. 26 0 12 1.83 22 14 6 1 0 0 0 1 0
............................................................................................................................................................................................................AAGCTGGCGCTGTCCCTTCCGAAGTACC................... 28 0 6 1.83 11 10 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CAGGCGCTGTCCCTTCCGAAGTACC................... 25 1 13 1.77 23 0 23 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAGTACCT.................. 24 0 13 1.46 19 18 1 0 0 0 0 0 0
...................................................................................................................................................................................CGTGTAGTAAAAATTAACGGTCGCTAAG............................................ 28 0 6 1.33 8 0 8 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACGGTCGCTAAGC........................................... 26 0 6 1.33 8 8 0 0 0 0 0 0 0
.................................................................................................................................................................TAAGCTGCTCTGCCGACTCGTGTAGT................................................................ 26 2 13 0.85 11 0 0 11 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAAGTAC.................... 24 0 12 0.83 10 5 3 0 1 1 0 0 0
...........................................................................................................................................................................................................TAAGCTGGCGCTGTCCCTTCCGAAGT...................... 26 0 6 0.83 5 2 3 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCCGAAGTACC................... 21 0 13 0.77 10 6 2 0 2 0 0 0 0
..................................................................................................................................................................................................................GCGCTGTCCCTTCCGAAGTACC................... 22 0 13 0.77 10 9 1 0 0 0 0 0 0
..................................................................................................................................................................CAGCTGCTCTGCCGACTCGTGTAGT................................................................ 25 0 13 0.77 10 2 7 0 1 0 0 0 0
..................................................................................................................................................................CAGCTGCTCTGCCGACTCGTGTAG................................................................. 24 0 13 0.69 9 5 4 0 0 0 0 0 0
..............................................................................................................................................................................................................GCTGGCGCTGTCCCTTCCGAAGTACCT.................. 27 0 6 0.67 4 2 1 0 1 0 0 0 0
..............................................................................................................................................................................................................GCTGGCGCTGTCCCTTCCGAAGTAC.................... 25 0 6 0.67 4 4 0 0 0 0 0 0 0
........................................................................................................................................................................................AGTAAAACTTAACGGTCGCTAAGCT.......................................... 25 1 6 0.67 4 0 0 4 0 0 0 0 0
...................................................................................................................................................................................CGTGTAGTAAAAATTAACGGTCGCTA.............................................. 26 0 12 0.58 7 0 4 0 3 0 0 0 0
.................................................................................................................................................................................CTCGTGTAGTAAAAATTAACGGTCGCT............................................... 27 0 11 0.55 6 1 5 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACGGTCGCTAAG............................................ 25 0 6 0.50 3 1 2 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCCGAAGTACCTCCT............... 25 0 12 0.50 6 3 3 0 0 0 0 0 0
.....................................................................................................................................................................................................GGTCGCTAAGCTGGCGCTGTCCCTT............................. 25 0 6 0.50 3 2 1 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAACTTAACGGTCGCTAAGCT.......................................... 27 1 6 0.50 3 0 0 3 0 0 0 0 0
....................................................................................................................................................................................................CGGTCGCTAAGCTGGCGCTGTCCCT.............................. 25 0 6 0.50 3 1 2 0 0 0 0 0 0
.............................................................................................................................................................................................................AGCTGGCGCTGTCCCTTCCGAAGTACCT.................. 28 0 6 0.50 3 3 0 0 0 0 0 0 0
........................................................................................................................................................................................................CGCTAAGCTGGCGCTGTCCCTTCCGA......................... 26 0 6 0.50 3 0 3 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAGTAC.................... 22 0 13 0.46 6 6 0 0 0 0 0 0 0
..................................................................................................................................................................................TCGTGTAGTAAAAATTAACGGTCGCT............................................... 26 0 11 0.45 5 3 2 0 0 0 0 0 0
................................................................................................................................................................CACAGCTGCTCTGCCGACTCGTGTAT................................................................. 26 1 7 0.43 3 0 3 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACGGTCGCTAA............................................. 24 0 12 0.42 5 4 0 1 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAGTACCTC................. 25 0 12 0.42 5 2 3 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCCGAAGTACCT.................. 22 0 13 0.38 5 3 2 0 0 0 0 0 0
...............................................................................................................................................................................................................CGGGCGCTGTCCCTTCCGAAGTACC................... 25 1 13 0.38 5 2 2 0 0 0 0 1 0
.............................................................................................................................................................................CCGACTCGTGTAGTAAAAATTAACGG.................................................... 26 0 11 0.36 4 3 1 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAGCGGTCGCTAAGCT.......................................... 27 1 6 0.33 2 0 0 2 0 0 0 0 0
........................................................................................................................................................................................................CGCTAAGCTGGCGCTGTCCCTT............................. 22 0 6 0.33 2 0 2 0 0 0 0 0 0
..........................................................................................................................................................................................................CTAAGCTGGCGCTGTCCCTTCCGAAGT...................... 27 0 6 0.33 2 0 2 0 0 0 0 0 0
...................................................................................................................................................................................................ACGGTCGCTAAGCTGGCGCTGTCCC............................... 25 0 6 0.33 2 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................TAGTAAAAATTAACGGTCGCTAAGCT.......................................... 26 0 6 0.33 2 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAAGTAGC................... 25 1 12 0.33 4 0 4 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACGGTGGCTAAGCT.......................................... 27 1 6 0.33 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................CGTGTAGTAAAAATTAACGGTCGCTAA............................................. 27 0 12 0.33 4 3 1 0 0 0 0 0 0
.....................................................................................................................................................................................................GGTCGCTAAGCTGGCGCTGTCCCT.............................. 24 0 6 0.33 2 1 0 0 1 0 0 0 0
.............................................................................................................................................................................................AAATTAACGGTCGCTAAGCTGGCGC..................................... 25 0 6 0.33 2 2 0 0 0 0 0 0 0
................................................................................................................................................................AAAAGCTGCTCTGCCGACTCGTGTAGT................................................................ 27 2 3 0.33 1 0 1 0 0 0 0 0 0
................................................................................................................................................................CACAGCTGCTCTGCCGACTCGTGTAG................................................................. 26 0 3 0.33 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TTTAGCTGGCGCTGTCCCTTCCGAAGT...................... 27 2 6 0.33 2 0 0 2 0 0 0 0 0
...........................................................................................................................................................................................AAAAATTAACGGTCGCTAAGCTGGCGC..................................... 27 0 6 0.33 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................ACAGCTGCTCTGCCGACTCGTGT................................................................... 23 0 3 0.33 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................TGCTGGCGCTGTCCCTTCCGAAGTACC................... 27 1 6 0.33 2 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................GTAAAAATTAACGGTCGCTAAGCT.......................................... 24 0 6 0.33 2 2 0 0 0 0 0 0 0
........................................................................................................................................................................................................CGCTAAGCTGGCGCTGTCTCTT............................. 22 1 6 0.33 2 0 2 0 0 0 0 0 0
........................................................................................................................................................................................AGTAAAAATTAGCGGTCGCTAAGCT.......................................... 25 1 6 0.33 2 0 0 2 0 0 0 0 0
.............................................................................................................................................................................................................AGCTGGCGCTGTCCCTTCCGAAGT...................... 24 0 6 0.33 2 2 0 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACGGTCGCTGAGCT.......................................... 27 1 6 0.33 2 1 0 0 1 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACGGTCGCTAAGCG.......................................... 27 1 6 0.33 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TAAGCTGGCGCTGTCCCTTCCGA......................... 23 0 6 0.33 2 0 2 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCGGAAGTACC................... 25 1 12 0.33 4 4 0 0 0 0 0 0 0
...................................................................................................................................................................................................ACGGTCGCTAAGCTGGCGCTGTCCCTT............................. 27 0 6 0.33 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................AGCTGCTCTGCCGACTCGTGTAGT................................................................ 24 0 13 0.31 4 4 0 0 0 0 0 0 0
................................................................................................................................................................CACAGCTGCTCTGCCGACTCGTGTGT................................................................. 26 2 7 0.29 2 0 2 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCGCTGTCCCTTCCGAAGTACCTCCT............... 28 0 11 0.27 3 3 0 0 0 0 0 0 0
..................................................................................................................................................................................TCGTGTAGTAAAAATTAACGGTCGCTA.............................................. 27 0 11 0.27 3 2 1 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCGCTGTCCCTTCCGAAGTACCTC................. 26 0 11 0.27 3 1 1 0 1 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCTGAAGTACC................... 25 1 12 0.25 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCCGAAGTACCTCCTGC............. 27 0 8 0.25 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCAGAAGTACC................... 25 1 12 0.25 3 3 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCGCTGTCCCTTCGGAAGTACC................... 24 1 12 0.25 3 3 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCGCTGTCCCTTCCGAAGTAC.................... 21 0 13 0.23 3 3 0 0 0 0 0 0 0
................................................................................................................................................................................................................GGGCGCTGTCCCTTCCGAAGTACC................... 24 1 13 0.23 3 1 2 0 0 0 0 0 0
.....................................................................................................................................................................CTGCTCTGCCGACTCGTGTAGTAAAAAT.......................................................... 28 0 13 0.23 3 2 0 0 0 0 0 1 0
....................................................................................................................................................................................................................GCTGTCCCTTCCGAAGTACC................... 20 0 13 0.23 3 3 0 0 0 0 0 0 0
..............................................................................................................................................................................CGACTCGTGTAGTAAAAATTAACTG.................................................... 25 1 11 0.18 2 0 2 0 0 0 0 0 0
..................................................................................................................................................................................TCGTGTAGTAAAAATTAACGGTCGC................................................ 25 0 11 0.18 2 1 1 0 0 0 0 0 0
......................................................................................................................................................................................GAAGTAAAAATTAACGGTCGCTAAGCT.......................................... 27 1 6 0.17 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................TCGCTAAGCTGGCGCTGTCCCTTC............................ 24 0 6 0.17 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CTAAGCTGGCGCTGTCCCTTCCGAATT...................... 27 1 6 0.17 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCCTCCGAAGTACC................... 25 1 12 0.17 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GGTCGCTAAGCTGGCGCTGTCCC............................... 23 0 6 0.17 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................GCTGGCGCTGTCCCTTCCGAAGTAGC................... 26 1 6 0.17 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................AAAAATTAACGGTCGCTAAGCTGGCGCT.................................... 28 0 6 0.17 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................GTGTAGTAAAAATTAACGGTCGCTAA............................................. 26 0 12 0.17 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GATTGCGCTGTCCCTTCCGAAGTACC................... 26 2 6 0.17 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................AAAAATTAACGGTCGCTAAGCT.......................................... 22 0 6 0.17 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAAGTA..................... 23 0 12 0.17 2 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAAGGACC................... 25 1 12 0.17 2 0 2 0 0 0 0 0 0
...................................................................................................................................................................................CGTGTAGTAAAAATTAACGGTCGCCAAG............................................ 28 1 6 0.17 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................CGCTAAGCTGGCGCTGTCCCTTCCG.......................... 25 0 6 0.17 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................AAACGGTCGCTAAGCTGGCGCTGTCCCT.............................. 28 1 6 0.17 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACGGTCGCTAAGTT.......................................... 27 1 6 0.17 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCGCTTCCGAAGTACC................... 25 1 12 0.17 2 0 0 2 0 0 0 0 0
....................................................................................................................................................................................................CGGTCGCTAAGCTGGCGCTGTCCCTT............................. 26 0 6 0.17 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CCGCTAAGCTGGCGCTGTCCCTTTCTA......................... 27 3 6 0.17 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGCCGCTGTCCCTTCCGAAGTACC................... 25 1 12 0.17 2 0 1 0 1 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCACTTCCGAAGTACC................... 25 1 12 0.17 2 0 0 2 0 0 0 0 0
........................................................................................................................................................................................................CGCTAAGCTGGCGCTGTCCCTTCAGA......................... 26 1 6 0.17 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................CGTGTAGTAAAAATTAACGGTCGC................................................ 24 0 12 0.17 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAGCTGGCGCTGTCCCTTCTGAAGTACC................... 28 1 6 0.17 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GTGGCGCTGTCCCTTCCGAAGTACC................... 25 1 12 0.17 2 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................CGCTAAGCTGGCGCTGTCCCTTCCGAAG....................... 28 0 6 0.17 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GCTGGCGCTGTCCCTTCCGAAGTA..................... 24 0 6 0.17 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCGCTGTCCCTTCCGAAGTAGC................... 24 1 12 0.17 2 0 2 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACGGTCGCTAAGCTT......................................... 28 1 6 0.17 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAGCTGGCGCTGTCCCTTCCGAAGT...................... 25 0 6 0.17 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................CGGTCGCTAAGCTGGCGCT.................................... 19 0 6 0.17 1 0 0 0 0 0 1 0 0
........................................................................................................................................................................................AGTAAAAATTAACGGTCGCTAAGC........................................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAGCTGGCGCTGTCCCTTCCGAAGTAC.................... 27 0 6 0.17 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................TAAAAATTAACGGTCGCTAAGCTGGC....................................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGCTGTCCCTTCCGAAGTACCTCCT............... 25 1 12 0.17 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CCGCTAAGCTGGCGCTGTCCCTTCCGA......................... 27 1 6 0.17 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................GCTGGCGCTGTCCCTTCGGAAGTACC................... 26 1 6 0.17 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................CGTGTAGTAAAAATTAACGCTCGCTAAG............................................ 28 1 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................AGTAACAATTAACGGTCGCTAAGCT.......................................... 25 1 6 0.17 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................ATGCTGGCGCTGTCCCTTCCGAAGTACC................... 28 1 6 0.17 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACGGTCGCTAAGAT.......................................... 27 1 6 0.17 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCCGAAGTACCTC................. 23 0 12 0.17 2 2 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGCTAAGCTGGCGCTGTCCCTT............................. 24 0 6 0.17 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................GTACTAAAAATTAACGGTCGCTAAGCT.......................................... 27 1 6 0.17 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................CTGTCCCTTCCGAAGTACC................... 19 0 13 0.15 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................GCTCTGCCGACTCGTGTAGTAAAAAT.......................................................... 26 0 13 0.15 2 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CAGGCGCTGTCCCTTCCGAAGTAGC................... 25 2 13 0.15 2 0 2 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCAGAAGTACC................... 23 1 13 0.15 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTGTCCCTTCCGAAGTACCT.................. 20 0 13 0.15 2 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CAGGCGCTGTCCCTTCCGAAGTACCT.................. 26 1 13 0.15 2 0 2 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCGGAAGTACC................... 23 1 13 0.15 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................ACAGCTGCTCTGCCGACTCGTGTAT................................................................. 25 1 7 0.14 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCCCTTCCGAAGTACCTCCTGCATGG......... 26 1 7 0.14 1 0 1 0 0 0 0 0 0
................................................................................................................................................................CACAGCTGCTCCGCCGACTCGTGTAT................................................................. 26 2 7 0.14 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................CGCTAAGCTGGCGCTGTCCGT.............................. 21 1 7 0.14 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................GCCGGCGCTGTCCCTTCCGAAGTACC................... 26 1 7 0.14 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCCTTCCGAAGTACCGCCTGCATGG......... 25 2 7 0.14 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................GGAAAAATTAACGGGCGCTAAGC........................................... 23 2 7 0.14 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCCTTCCGAAGTACCTCTCGC............. 21 2 8 0.13 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTTCGAAGTACCTCCTTC............. 27 2 8 0.13 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTGTCCCTTCCGAAGTACCTCCTGC............. 25 0 8 0.13 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTCCCTTCCGAAGTACCTCCTGC............. 24 0 8 0.13 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCCTTCCGAAGTACCTCCTGCTT........... 23 1 8 0.13 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCCTTCCGAAGTACCTCCTTC............. 21 1 8 0.13 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................CAGCTGCTCTGCCGACTCGTGTA.................................................................. 23 0 17 0.12 2 2 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCCCTTCCGAAGTACCTCCTGCGT........... 24 1 9 0.11 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................ACTCGTGTAGTAAAAATTAACGGTCGC................................................ 27 0 11 0.09 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................CCGACTCGTGTAGTAAAAATTAACGGT................................................... 27 0 11 0.09 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................GCTGTGCCGACTCGTGTAGTAAAAATT......................................................... 27 1 11 0.09 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................TGCCGACTCGTGTAGTAAAAATTAACGG.................................................... 28 0 11 0.09 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................ACTCGTGTAGTAAAAATTAACGGTCGCT............................................... 28 0 11 0.09 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................CTCGTGTAGTAAAAATTAACGGTCGCTA.............................................. 28 0 11 0.09 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................GCCGACTCGTGTAGTAAAAATTAACGGT................................................... 28 0 11 0.09 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................CTCGTGTAGTAAAAATTAACGGTCGC................................................ 26 0 11 0.09 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................GTATTAAAAATTAACGGTCGCTAAGCT.......................................... 27 1 11 0.09 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................CGACTCGTGTAGTAAAAATTAACGGT................................................... 26 0 11 0.09 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................TCGTGTAGTAAAAATTAACGGTCGCGA.............................................. 27 1 11 0.09 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAAGTACCTCCT............... 29 0 11 0.09 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................GCCGACTCGTGTAGTAAAAATTAACGTT................................................... 28 1 11 0.09 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................CGTGTAGTAAAAATTATCGGTCGCT............................................... 25 1 12 0.08 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTATCCCTTCCGAAGTACC................... 25 1 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAAGTATC................... 25 1 12 0.08 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CTAATCTGGCGCTGTCCCTTCCGAAGT...................... 27 1 12 0.08 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCGCTTTCCCTTCCGAAGTACCT.................. 25 1 12 0.08 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................TCCCTTCCGAAGTACCTCCT............... 20 0 12 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCCGAAGTACCTCCTG.............. 26 0 12 0.08 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACTGTCGCTAA............................................. 24 1 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCG.......................... 18 0 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCGGTCCCTTCCGAAGTACC................... 25 1 12 0.08 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................................GTAGTAAAAATTAACGGTCGCT............................................... 22 0 12 0.08 1 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................GCGCTGTCCCTTCCGAAGTACCTCC................ 25 0 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................CCTCAGCCGCTCTGCCGACTCGTGTAG................................................................. 27 2 12 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GGTGATGTCCCTTCCGTAGTACCTCCT............... 27 3 12 0.08 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAACTACC................... 25 1 12 0.08 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................TTAGTCCCTTCCGAAGTACCTCCT............... 24 3 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAAGTACT................... 25 1 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGACGCTGTCCCTTCCGAAGTACC................... 25 1 12 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCCGAAGTACCGCTT............... 25 2 12 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCGCTGTCCCTTCCGAAGTACCTCCTG.............. 27 0 12 0.08 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTGTCCCTTCCGAAGTACCTCCT............... 23 0 12 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAGTACCTCC................ 26 0 12 0.08 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................GCTGTCCCTTCCGAAGTACCTCCT............... 24 0 12 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCGCTGTAACTTCCGAAGTACC................... 24 2 12 0.08 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCGTCCTAAGTACCT.................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GGGCTGTCCCTTCCGAAGTACCTCCT............... 26 1 12 0.08 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCCGTCCCTTCCGAAGTACC................... 25 1 12 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................CTCAGCTGCTCTGCCGACTCGTGTAG................................................................. 26 1 12 0.08 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTCCCTTCCGAAGTACCTCGT............... 22 1 12 0.08 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................ACGCTGTCCCTTCCGAAGTACCTC................. 24 1 12 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCACTGTCCCTTCCGAAGTACC................... 24 1 12 0.08 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTGTCCCTTCCGAAGTACCTCCTG.............. 24 0 12 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCGCTGTCACTTCCGAAGTACC................... 24 1 12 0.08 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................TCTGGCGCTGTCCCTTCCGAAGTACC................... 26 1 12 0.08 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCTCTTCCGAAGTACC................... 25 1 12 0.08 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCGCTGTCCCTTCAGAAGTACC................... 24 1 12 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCGCTGTCCCTTCCGAAGT...................... 21 0 12 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGCGCTGTCCCTTCCGAAGTACT................... 24 1 12 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................CGTGTTGTAAAAATTAACGGTCGCTAA............................................. 27 1 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCGAAGTACG................... 25 1 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGTTGTCCCTTCCGAAGTACC................... 25 1 12 0.08 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................GCTGTCCCTTCCGAAGTACCTCC................ 23 0 12 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................AGTAAAAATTAACGGTCGCTAA............................................. 22 0 12 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAATACCTCCT............... 27 1 12 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................CCGACTCGTGTAGTAATAATTAACGGA................................................... 27 2 12 0.08 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................GTGTAGTAAAAATTAACGGTCGGT............................................... 24 1 12 0.08 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TTACGCTGTCCCTTCCGAAGTACC................... 24 2 12 0.08 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................AGTAGTAAAAATTAACGGTCGCT............................................... 23 1 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTACCTTCCGAAGTACC................... 25 1 12 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TGCGCTGTCCCTTCCGAAGTACCTCCT............... 27 1 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTTTTGCTGTCCCTTCCGAAGTACC................... 25 3 12 0.08 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................CCTGGCGCTGTCCCTTCCGAAGTACC................... 26 1 12 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCCTTCCGAAGTACCTCCTG.............. 20 0 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTTCCAAAGTACCT.................. 26 1 12 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTCGCGCTGTCCCTTCCGAAGTAAC................... 25 2 12 0.08 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................GTTGCGCTGTCCCGTCCGAAGT...................... 22 3 12 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................CGTGTAGTCAAAATTAACGGTCGCTA.............................................. 26 1 12 0.08 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTCCCGAAGTACC................... 25 1 12 0.08 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCGGAAGTACC................... 21 1 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CAGGCGCTGTCCCTTCCGAAGTA..................... 23 1 13 0.08 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CAGGCGCTGTCCCTTCCGAAGTATC................... 25 2 13 0.08 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTCCCTTCCGAAGTACC................... 18 0 13 0.08 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................CTGCTCTGCCGACTCGTGTAGTAAAAA........................................................... 27 0 13 0.08 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................CCGGGCGCTGTCCCTTCCGAAGTACC................... 26 2 13 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................TAGGCTGCTCTGCCGACTCGTGTAGT................................................................ 26 3 13 0.08 1 0 0 1 0 0 0 0 0
................................................................................................................................................................CTCAGCTGCTCTGCCGACTCGTTTAG................................................................. 26 2 13 0.08 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCCGAAGTA..................... 19 0 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CAGGCGCTGTCCCTTCCGAAGTAC.................... 24 1 13 0.08 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTACATTCCGAAGAACC................... 25 3 13 0.08 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CAGGCGCTGTCCCTTCCGA......................... 19 1 13 0.08 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................AGCTGCTCTGCCGACTCGTGTAG................................................................. 23 0 13 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCGCTGTCCCTTCCGAAGTACCT.................. 23 0 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGGCGCTGTCCCTTCCGAAGTACC................... 25 2 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CAGGCTGTCCCTTCCGAAGTACC................... 23 3 13 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAA........................ 18 0 13 0.08 1 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................CCGGCTGTCCCTTCCGAAGTACC................... 23 3 13 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAGTA..................... 21 0 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CAGGCGCTGTCCCTTCCGAAGGACC................... 25 2 13 0.08 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................CTGCTCTGCCGACTCCTGTAGTAA.............................................................. 24 1 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAGT...................... 20 0 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCCGAAGTCCC................... 21 1 13 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TTCGCTGTCCCTTCCGAAGTACC................... 23 2 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCGTCCGAAGTACC................... 23 1 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAGTACCG.................. 24 1 13 0.08 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TGCTCTGCCGACTCGTGTGGTAAAAAT.......................................................... 27 1 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................AGCTGCTCTGCCGACTCGTGTAGTAAA............................................................. 27 0 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................AGCTGCTCTGCCGACGCGTGTAGT................................................................ 24 1 13 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................CAGCTGCTCTGCCGACTCGTGTAGTAA.............................................................. 27 0 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CCGGCTGTCCCTTCCGAAGTACCT.................. 24 3 13 0.08 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................GGTCTGCCGACTCGTGTAGTAAAAA........................................................... 25 1 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGGGCGCTGTCCCTTCCGAAGTACCT.................. 26 1 13 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCCGAAGTATC................... 23 1 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................AGCTGCTCTGCCGACTCGTGTAGTAA.............................................................. 26 0 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCTGTCCCTTCCGAAGTAC.................... 20 0 13 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGGCGCTGTCCCTTCCGAAGTACC................... 24 1 13 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................CTCTGCCGACTCGTGTAGTAAAAAT.......................................................... 25 0 13 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................CTGCCGACTCCTGTAGTAAAAAT.......................................................... 23 1 13 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCGCTGTCCCTTCTGAAGTACC................... 23 1 13 0.08 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TGCTCTGCCGACTCGTGTAGTAAAAAT.......................................................... 27 0 13 0.08 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................CTGCTCTGCCGACTCGTGTAGTAAA............................................................. 25 0 13 0.08 1 0 0 0 1 0 0 0 0
.......................................................................................................................................................................GCTCTGCCGACTCGTGTAGTA............................................................... 21 0 13 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................CAGCTGCTCTGCCCACTCGTGTAGT................................................................ 25 1 13 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GGGGCTGTCCCTTCCGAAGTACCT.................. 24 1 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCGCTGTCCCTCGCGAAGTAC.................... 24 2 14 0.07 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................CAGCTGTTCTGCCGCCTCGTGTAGTA............................................................... 26 2 14 0.07 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCGCTGTCCCTTGCGAAGTACCTCCT............... 26 1 14 0.07 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................TTCCGCCGCAGCTGCTCTGCCGACT........................................................................ 25 1 15 0.07 1 0 0 0 1 0 0 0 0
................................................................................................................................................................CTCAGCTGCTCTGCCGACTCGTGT................................................................... 24 1 16 0.06 1 0 1 0 0 0 0 0 0
................................................................................................................................................................CCCAGCTGCTCTGCCGACTCGTGT................................................................... 24 1 16 0.06 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................AAATTAACGGTCGCTAACCTGGCGCT.................................... 26 1 17 0.06 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................CAGCTGCTCTGCCGACTCGTGT................................................................... 22 0 17 0.06 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................AGCTGCTCTGCCGACTCGTGT................................................................... 21 0 17 0.06 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................CGGCTGCTCTGCCGACTCGTGTA.................................................................. 23 1 17 0.06 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................CAGCTGCTCTGCCGACTCGTTT................................................................... 22 1 18 0.06 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 chr3h:107931-108181 + dya_1269 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCGGGCATGGATGCGAT----CCTGACACAAAGGCCGGCTAGGTTTGGCCAAGATGACGGCAGCCACCGTCAAAAAGGCGGTGTCGAC------GAGACGGCTGAGCACATCATTTTTAATTGCCAGCGATTCGACCGCG-ACAGGG---AAGGCTTCATGGAGGAC-----------------GGACCCTTCTACCC
droEre2 scaffold_4706:48219-48395 + -----------------------------------------------------------------------------------AGCGGTCATGGGTGTTTTAGAAGCTACCTAAGGAACCTACCAGGTTCGGCCACGATGATGACCGCAACTGCCCAGAATGCGGCGTCGAG------GAAACTGCCGAGCACATTATTTTTAATTGCCGGAGATTCGACAGCG-ACCGGG---AAGGCTTAATGGGGAATAT------------AATGGAGCCGTCGACCC
droSec2 scaffold_636:683-866 - -----------------------------------------------------------------------------------AGCGGGCACGGTTGCTTTCGCAGCTACCT--------AAAGCGCTTTGGACACGAGGATGCGGATGACTGTCCATGGTGCGGTGGTGGTCGGAGCGAAACAGCTGAGCACGTTCTCTTCTCGTGCGTTAAAT------ACGCTAGGGAAC-GGAGCTCTCTGGAAGCCGTACTTGGCGGCAGACTGAATGCGGACAACC
droSim2 node_15642:86-195 + ----------------------------------------------------------------------------------TAGCGGGCATGGATGCTTCAGGAGCTACCT--------GGCTAGGTTTGGCCACGACGACGACAGCCACTGCTCAGAATGCGGCGTCGAC------GAGACGGCTGAGCACATCATCTTTAATT----------------------------------------------------------------------------
dm3 chr3R:340564-340639 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATTATTCTTAATTGTCCGCTACTCGACCACG-ACAGGA---AAGGTTTCATGGAGGACCT------------AGTGGACCCGTCGATCC
droEug1 scf7180000408955:10462-10580 + -----------------------------------------------------------------------------------A-----------------------------------------GATTTGGCCACGATGACGACGGAAACTGCACACTCTGTGGCGGAAAA------GAAACGACGGAGCACTTTTTGCTCACGTGTCCGCGTTTTGTAG-CA-AAAGGG---ATGGAGTTCTGGACGGAAT----------------------------C
droBia1 scf7180000302296:21800-21899 + --------------------------------------------------------------------------------------------------------------CT--------GACTAGATTCGGCCACGACGACGACCACAGCTATCCACAATGCGGATCAGAA------GA-----------ATATACCCTTCACGCGCCCACGGTTTGAGC-----------------------------------------------GGACCCTACTGCCC
droTak1 scf7180000414028:3319-3487 + -----------------------------------------------------------------------------------AGCAGACATGGATGCTTCAGGAGCTACCT--------GACCAGATTCGGTCACGACGACGACCACAGCTGCCCCCAATGCGGAGTGGAG------GAGACCGCCGAGCACGTGATCTTCACCTGCCCACGGTTTGAGCGTG-AAAGGG---AAGAATTCCTAGGCGAGAC------------CAGGGACCCTGTTGCCC
droEle1 scf7180000490104:116419-116586 + -----------------------------------------------------------------------------------AGCGGGCATGGTTGCTTAAGGAGCTACCT--------A-ATAGGTTTGGCCACGACGATGACCCTAGCTGCCCGCAATGCGGTGTTGAG------GAAACGGCGGAGCACATCATCTTCACCTGTCCACGGTTTGACCGCG-ACAGGG---ATGAATTCATGGGCGAGAC------------CAGAGACCCGACAGCGC
droAna3 scaffold_3878:4344-4512 + -----------------------------------------------------------------------------------AGCGGCCACGGTTGCTTCAGAAGCTACCT--------TTTCAAATTTGGTCATGACGACGACCCAAGGTGCCCGGCATGCGGCGTAGAA------GAAACTGCGGAGCACGTGGTCTTGGACTGCCCACGGTTCACAGCTC-CAAGGC--AAAGACTTCTTGG-GGATGT------------ACAGACGGCGGAACTCC
droBip1 scf7180000393312:18001-18169 - -----------------------------------------------------------------------------------AGCGGCCACGGATGCTTCAGGAGCTACCT--------GTTCAAATTTGGACAAGACGACGACCCAAGATGCCCGGAATGCGGGGTGGAC------GAGACGGCGGAACACGTGGTTCTGGACTGCCCACGCTTTTCAGTCC-CCAGGC---GGAGACTCCTAGGGGAAGT------------ATCGACGGTGGACCTCA
droPer2 scaffold_91:148445-148553 - -----------------------------------------------------------------------------------GGCG-----------------------------------------------------------------------------ACGCCACT------GAAGACGCTGAGCACATCATTTTTCATTGTGGGCGCTTCGCACTTA-AGAGGG---AGGAGCTGTGGCGAGCCGC---CGGCGGGCAGCTCACGCCGAACAACC
droWil2 scf2_1100000004909:2078343-2078415 - -----------------------------------------------------------------------------------G--------------------------------------------------------------------------------------AC------GAGACGGCCGAACATGTCCTCTTCAAGTGCGGACGCTTCGAAACCG-AGAGAG---AACACCTCGAGGCGGAA-C-----------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCGGGCATGGATGCGAT----CCTGACACAAAGGCCGGCTAGGTTTGGCCAAGATGACGGCAGCCACCGTCAAAAAGGCGGTGTCGAC------GAGACGGCTGAGCACATCATTTTTAATTGCCAGCGATTCGACCGCG-ACAGGG---AAGGCTTCATGGAGGAC-----------------GGACCCTTCTACCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................TCGACCGCG-ACAGGG---AAGGCTT.........................................2262.3314000000000014
.................................................................................................................................................................................................................AGCGATTCGACCGCG-ACAGGG---AAGGC...........................................2661.50906300000000
.............................................................................................................................................................................................................TGCCAGCGATTCGACCGCG-ACAGGG---AAT.............................................2891.2211000000000011
.............................................................................................................................................................................................................TGCCAGCGATTCGACCGCG-ACAGGG---................................................2560.83500000000005
......................................................................................................................................................................GTCGAC------GAGACGGCTGAGCACATCAC....................................................................................26130.69900000000009
.................................................................................................................................................................................................................AGCGATTCGACCGCG-ACAGGG---................................................2160.33202000000000
.......................................................................................................................................................................................................................TCGACCGCG-ACAGGG---AAGGCTTCATG.....................................2660.33202000000000
.......................................................................................................................................................................................................................TCGACCGCG-ACAGGG---AAGGCTTCAT......................................2560.33201100000000
......................................................................................................................................................................................................................TTCGACCGCG-ACAGGG---AAGGCTTCATG.....................................2760.33202000000000
.................................................................................................................................................................................................................AGCGATTCGACCGCG-ACAGGG---AAG.............................................2460.33202000000000
.............................................................................................................................................................................................................TGCCAGCGATTCGACCGCG-ACAGGG---AA..............................................2760.33200000000002
....................................................................................................................................................................................................................GATTCGACCGCG-ACAGGG---AAGGCT..........................................2460.33200200000000
.................................................................................................................................................................................................................AGCGATTCGACCGCG-ACAGGG---AAGG............................................2560.33202000000000
.....................................................................................................................................................................TGTCGAC------GAGACGGCTGAGCACATC......................................................................................2530.33101000000000
.......................................................................................................................................................................TCGAC------GAGACGGCTGAGCACATCATT...................................................................................26130.31413000000000
......................................................................................................................................................................GTCGAC------GAGACGGCTGAGCACATC......................................................................................24130.31403010000000
.......................................................................................................................................................................................................................TCGACCGCG-ACAGGG---AAGGCTTCATT.....................................2660.17100100000000
.....................................................................................................................................................................................................TTTTTAATTGCCAGCGATTCGACCGC...........................................................2660.17100100000000
...................................................................................................................................................................................................CATTTTTAATTGCCAGCGATTCGAC..............................................................2560.17101000000000
.........................................................................................................................................................................................................TAATTGCCAGCGATTCGACCGCG-AC.......................................................2560.17101000000000
..................................................................................................................................................................................................TCATTTTTAATTGCCAGCGATTCGACC.............................................................2760.17100100000000
............................................................................................................................................................................................................TTGCCAGCGATTCGACCGCG-ACAG.....................................................2460.17101000000000
............................................................................................................................................................................................................TTGCCAGCGATTCGACCGCG-ACAGTT---T...............................................2760.17101000000000
..................................................................................................................................................................................................TCATTTTTAATTGCCAGCGATTCGAC..............................................................2660.17100100000000
.......................................................................................................................................................................................................TTTAATTGCCAGCGATTCGACCGCG-AC.......................................................2760.17100100000000
.................................................................................................................................................................................................................AGCGATTCGACCGCG-ACAGGG---A...............................................2260.17101000000000
.......................................................................................................................................................................................................................TCGACCGCG-ACAGGG---AAGGCTTCA.......................................2460.17101000000000
..............................................................................................................................................................................................................GCCAGCGATTCGACCGCG-ACAGGG---G...............................................2560.17100100000000
.......................................................................................................................................................................................................................TCGACCGCG-ACAGGG---AAGGCT..........................................2160.17100100000000
......................................................................................................................................................................................................TTTTAATTGCCAGCGATTCGACCG............................................................2460.17100010000000
....................................................................................................................................................................................................................GATTCGACCGCG-ACAGGG---AAGGC...........................................2360.17100100000000
............................................................................................................................................................................................AGCACATCATTTTTAATTGCCAGCGAT...................................................................27110.09101000000000
..........................................................................................................................................................................................TGAGCACATCATTTTTAATTGCCAGCGAT...................................................................29110.09100100000000
.............................................................................................................................................................................................................................GCG-ACAGGG---AAGGCTTCATGGAGGA................................25120.08101000000000
..............................................................................................................................................................................................................................CG-ACAGGG---AAGGCTTCATGGAGG.................................23120.08100100000000
.............................................................................................................................................................................................................................GCG-ACAGGG---AAGGCTTCATGGAGG.................................24120.08101000000000
............................................................................................................................................................................................................................CGCG-ACAGGG---AAGGCTTCATGGAG..................................24120.08101000000000
.........................................................................................................................................................................GAC------GAGACGGCTGAGCACATCATTTT.................................................................................26130.08100100000000
......................................................................................................................................................................GTCGAC------GAGACGGCTGAGCACATCAT....................................................................................26130.08101000000000
.......................................................................................................................................................................TCGAC------GAGACGGCTGAGCACATCA.....................................................................................24130.08101000000000
.......................................................................................................................................................................TCGAC------GAGACGGCTGAGCACATCAT....................................................................................25130.08101000000000
.........................................................................................................................................................................GAC------GAGACGGCTGAGCACATCATT...................................................................................24130.08101000000000
.........................................................................................................................................................................GAC------GAGACGGCTGAGCACATCATTTTT................................................................................27130.08101000000000
.............................................................................................................................................................................................................................GCG-ACAGGG---AAGGCTTCATGGA...................................22130.08101000000000
......................................................................................................................................................................GTCGAC------GAGACGGCTGAGCAC.........................................................................................21170.06101000000000
droEre2
-----------------------------------------------------------------------------------AGCGGTCATGGGTGTTTTAGAAGCTACCTAAGGAACCTACCAGGTTCGGCCACGATGATGACCGCAACTGCCCAGAATGCGGCGTCGAG------GAAACTGCCGAGCACATTATTTTTAATTGCCGGAGATTCGACAGCG-ACCGGG---AAGGCTTAATGGGGAATAT------------AATGGAGCCGTCGACCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................CTGCCCAGAATGCGGCGTCGAG------GAAACTGCC...............................................................................................31201.503000000030
......................................................................................................................................................................................................................TTCGACAGCG-ACCGGG---AAGGCTTAA.......................................2511.0011000000
...........................................................................................................................................................................................GAGCACATTATTTTTAATTGCCGGAGT....................................................................27200.801600000016
.....................................................................................................................................................................................................................................................GGGAATAT------------AATGGAGCCGTCGACC.24200.601211000100
.....................................................................................................................................................................................................................................................GGGAATAT------------AATGGAGCCGTCGACCC25200.551110000100
......................................................................................................................................................CTGCCCAGAATGCGGCGTCGAG------GA......................................................................................................24200.3061000005
..............................................................................................................................................................................................CACATTATTTTTAATTGCCGGAGATT..................................................................26200.2550000005
..............................................................................................................................................................................................CACATTATTTTTAATTGCCGGAGAT...................................................................25200.2550000005
................................................................................................................................................................................................CATTATTTTTAATTGCCGGAGATT..................................................................24200.2550000005
..........................................................................................................................................................................................................................................AAGGCTTAATGGGGAATAT------------AATGGAT..........26200.2550000005
......................................................................................................................................................CTGCCCAGAATGCGGCGTCGAG------........................................................................................................22200.2555000000
...................................................................................................................................................................................................................................................TGGGGAATAT------------AATGGAGCCGTCGACCC27200.2554100000
.....................................................................................................................................................................................................................................................GGGAATAT------------AATGGAGCCGTCGA...22200.1533000000
.....................................................................................................................................................ACTGCCCAGAATGCGGCGTCGAG------........................................................................................................23200.1533000000
....................................................................................................................................................................................................................................................GGGGAATAT------------AATGGAGCCGTCGACC.25200.1531000002
...................................................................................................................................................................................................................................................TGGGGAATAT------------AATGGAGCCGTCGACC.26200.1530000300
....................................................................................................................................................................................................................................................GGGGAATAT------------AATGGAGCCGTCGACCC26200.1022000000
..........................................................................................................................................................................................................................................AAGGCTTAATGGGGAATAT------------AATGG............24200.1021000100
......................................................................................................................................................CTGCCCAGAATGCGGCGTCGAG------AT......................................................................................................24200.1021000001
................................................................................................................................TCGGCCACGATGATGACCGCA.....................................................................................................................................21200.1022000000
.......................................................................................................................................................TGCCCAGAATGCGGCGTCGAG------........................................................................................................21200.1022000000
..........................................................................................................................................................CCAGAATGCGGCGTCGAG------GAAACTGC................................................................................................26200.1022000000
...................................................................................................................................................................GGCGTCGAG------GAAACTGCCGAGCACA........................................................................................25200.1022000000
...................................................................................................................................................................................................................................................TGGGGAATAT------------AATGGAGCCGTCGAC..25200.1022000000
......................................................................................................................................ACGATGATGACCGCAACTG.................................................................................................................................19200.1022000000
.....................................................................................................................................................................CGTCGAG------GAAACTGCCGAGCACATTAT....................................................................................27160.0611000000
...................................................................................................................................................................................AAACTGCCGAGCACATTATTTTTAAT.............................................................................26190.0511000000
...................................................................................................................................GCCACGATGATGACCGCAACTG.................................................................................................................................22200.0511000000
.....................................................................................................................................................................CGTCGAG------GAAACTGCCGAGCACTC.......................................................................................24200.0511000000
................................................................................................................................TCGGCCACGATGATGACCGCAACTGCC...............................................................................................................................27200.0511000000
.........................................................................................................................ACCAGGTTCGGCCACGAT...............................................................................................................................................18200.0511000000
.................................................................................................................................................................GCGGCGTCGAG------GAAACTGCCGAGCA..........................................................................................25200.0511000000
...........................................................................................................................................................................................GAGCACATTATTTTTAATTGCCGGAGA....................................................................27200.0511000000
...................................................................................................................................................CAACTGCCCAGAATGCGGCGTCGAG------GA......................................................................................................27200.0511000000
..........................................................................................................................................................................................................................................AAGGCTTAATGGGGAATAT------------AAT..............22200.0511000000
................................................................................................................................................................TGCGGCGTCGAG------GAAACT..................................................................................................18200.0511000000
...........................................................................................................................................GATGACCGCAACTGCCCAGAATG........................................................................................................................23200.0511000000
......................................................................................................................................................CTGCCCAGAATGCGGCGTCGAG------GAAAA...................................................................................................27200.0511000000
................................................................................................................................................................TGCGGCGTCGAG------GAAACTGC................................................................................................20200.0511000000
..................................................................................................................................................................CGGCGTCGAG------GAAACTGC................................................................................................18200.0511000000
.........................................................................................................................................................................................................................................................ATAT------------AATGGAGCCGTCGACCC21200.0511000000
......................................................................................................................................................CTGCCCAGAATGCGGCGTCGAG------G.......................................................................................................23200.0510000001
..........................................................................................................................................................................................................................................AAGGCTTAATGGGGAATAT------------AATGGAGC.........27200.0511000000
...........................................................................................................................................................CAGAATGCGGCGTCGAG------GAAACTGC................................................................................................25200.0511000000
..........................................................................................................................................................CCAGAATGCGGCGTCGAG------GAAACTGCCA..............................................................................................28200.0511000000
................................................................................................................................................................................................CATTATTTTTAATTGCCGGAGATTC.................................................................25200.0511000000
.....................................................................................................................................................................CGTCGAG------GAAACTGCCGAGCACAT.......................................................................................24200.0511000000
......................................................................................................................................ACGATGATGACCGCAACTGCCCAGAA..........................................................................................................................26200.0511000000
................................................................................................................................................................................................CATTATTTTTAATTGCCGGAGAT...................................................................23200.0511000000
..........................................................................................................................................................................................................................................AAGGCTTAATGGGGAATAT------------AATGGA...........25200.0510000100
......................................................................................................................................................CTGCCCAGAATGCGGCGTCGA...............................................................................................................21200.0511000000
...........................................................................................................................................GATGACCGCAACTGCCCAGAATGCGG.....................................................................................................................26200.0511000000
......................................................................................................................................................CTGCCCAGAATGCGGCGTCGAG------GT......................................................................................................24200.0511000000
.....................................................................................................................................................ACTGCCCAGAATGCGGCGTCGAG------GAAAA...................................................................................................28200.0511000000
...............................................................................................................................TTCGGCCACGATGATGACCGCAAC...................................................................................................................................24200.0511000000
......................................................................................................................................................CTGCCCAGAATGCGGCGTCGAG------TTT.....................................................................................................25200.0511000000
..........................................................................................................................................................CCAGAATGCGGCGTCGAG------GAAAC...................................................................................................23200.0511000000
................................................................................................................................................................TGCGGCGTCGAG------GAAACTGCC...............................................................................................21200.0511000000
.................................................................................................................................................................................................ATTATTTTTAATTGCCGGAGATTCGA...............................................................26200.0510000100
......................................................................................................................................................CTGCCCAGAATGCGGCGTCGAG------GAAACTGCG...............................................................................................31200.0510000001
.....................................................................................................................................................................................................................................................GGGAATAT------------AATGGAGCCGTCGAC..23200.0511000000
................................................................................................................................................................TGCGGCGTCGAG------GAAACTGCCGAGCACA........................................................................................28200.0511000000
................................................................................................................................................................................................................................................TAATGGGGAATAT------------AATGGAGCCGTCG....26200.0511000000
.....................................................................................................................................CACGATGATGACCGCAACTGCCCAGAA..........................................................................................................................27200.0511000000
...............................................................................................................................TTCGGCCACGATGATGACCGCA.....................................................................................................................................22200.0511000000
................................................................................................................................TCGGCCACGATGATGACCGCAACTGC................................................................................................................................26200.0511000000
...............................................................................................................................................................ATGCGGCGTCGAG------GAAACTGCCGA.............................................................................................24200.0511000000
droSec2
-----------------------------------------------------------------------------------AGCGGGCACGGTTGCTTTCGCAGCTACCT--------AAAGCGCTTTGGACACGAGGATGCGGATGACTGTCCATGGTGCGGTGGTGGTCGGAGCGAAACAGCTGAGCACGTTCTCTTCTCGTGCGTTAAAT------ACGCTAGGGAAC-GGAGCTCTCTGGAAGCCGTACTTGGCGGCAGACTGAATGCGGACAACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................AGCGCTTTGGACACGAGGATGCGG........................................................................................................................................24201.302621050
...................................................................................................................................................TGACTGTCCATGGTGCGGTGGT.................................................................................................................22100.6062040
..........................................................................................................................AGCGCTTTGGACACGAGGATGC..........................................................................................................................................22200.4596030
.............................................................................................................................................TGCGGATGACTGTCCATGGTGCGGT....................................................................................................................2590.4443001
.................................................................................................................................................................................................................................TAGGGAAC-GGAGCTCTCTGGAAGCCG..............................26200.3577000
.............................................................................................................................................TGCGGATGACTGTCCATGGTGCGGTGG..................................................................................................................2790.3333000
..........................................................................................................................AGCGCTTTGGACACGAGGATGCGGAT......................................................................................................................................26200.3066000
...................................................................................................................................................TGACTGTCCATGGTGCGGTGGTG................................................................................................................23100.3032010
.................................................................................................................................................................................................................................TAGGGAAC-GGAGCTCTCTGGAAGCC...............................25200.3062040
...................................................................................................................................................TGACTGTCCATGGTGCGGTGGTGG...............................................................................................................24100.3033000
..................................................................................................................................................................................................TTCTCTTCTCGTGCGTTAAAT------ACG..........................................................24200.2555000
..........................................................................................................................AGCGCTTTGGACACGAGGATGCGGA.......................................................................................................................................25200.2550131
...................................................................................................................................................TGACTGTCCATGGTGCGGTGG..................................................................................................................21100.2021010
..............................................................................................................................................................................................................................................CTCTCTGGAAGCCGTACTTGGCGG....................24200.1533000
..........................................................................................................................AGCGCTTTGGACACGAGGATGCGT........................................................................................................................................24200.1533000
.......................................................................................................................................................TGTCCATGGTGCGGTGGTGGTCGGAG.........................................................................................................26180.1122000
.......................................................................................................................................................TGTCCATGGTGCGGTGGTGGT..............................................................................................................21180.1120020
...................................................................................................................................................TGACTGTCCATGGTGCGGTGGTGGT..............................................................................................................25100.1011000
...................................................................................................................................................................................................TCTCTTCTCGTGCGTTAAAT------ACGC.........................................................24200.1022000
..................................................................................................................................................................................................................................AGGGAAC-GGAGCTCTCTGGAAGCCGTAC...........................28200.1022000
.............................................................................................................................................TGCGGATGACTGTCCATGGTGCGG.....................................................................................................................24200.1020020
......................................................................................................................................................................................................................T------ACGCTAGGGAAC-GGAGCTCTCTGG....................................25200.1020020
................................................................................................................................................................TGCGGTGGTGGTCGGAGCGAAA....................................................................................................22170.0610010
.....................................................................................................................................................ACTGTCCATGGTGCGGTGGTGT...............................................................................................................22170.0610010
.............................................................................................................................................................TGGTGCGGTGGTGGTCGGA..........................................................................................................19180.0610010
.........................................................................................................................................................TCCATGGTGCGGTGGTGGTCGG...........................................................................................................22180.0611000
.......................................................................................................................................................TGTCCATGGTGCGGTGGTGGTCG............................................................................................................23180.0611000
.......................................................................................................................................................TGTCCATGGTGCGGTGGTGG...............................................................................................................20180.0610001
.......................................................................................................................................................TGTCCATGGTGCGGTGGTGGTCGGA..........................................................................................................25180.0611000
................................................................................................................................TTGGACACGAGGATGCGGA.......................................................................................................................................19200.0510100
...................................................................................................................................................................................................................................GGGAAC-GGAGCTCTCTGGAAGC................................22200.0511000
..................................................................................................................................................................................................................................AGGGAAC-GGAGCTCTCTGGAAGCCGTT............................27200.0510010
..........................................................................................................................AGCGCTTTGGACACGAGGATGCGTT.......................................................................................................................................25200.0511000
..........................................................................................................................AGCGCTTTGGACACGAGGATGCGGT.......................................................................................................................................25200.0511000
...........................................................................................................................................................................TCGGAGCGAAACAGCTGAGCACGT.......................................................................................24200.0511000
.................................................................................................................................................................................................................................TAGGGAAC-GGAGCTCTCTGGAAG.................................23200.0511000
............................................................................................................................................................................................................................................AGCTCTCTGGAAGCCGTACTTGGC......................24200.0510010
.................................................................................................................................................................................................................................TAGGGAAC-GGAGCTCTCTGGAAGCCT..............................26200.0510010
...............................................................................................................................................................................................................................................TCTCTGGAAGCCGTACTTGGCGGCA..................25200.0511000
..................................................................................................................................................................................................TTCTCTTCTCGTGCGTTAAAT------ACGCTA.......................................................27200.0511000
...........................................................................................................................................................................................................................................GAGCTCTCTGGAAGCCGTACTTG........................23200.0511000
..........................................................................................................................AGCGCTTTGGACACGAGGATGCG.........................................................................................................................................23200.0510100
.........................................................................................................................................................................GGTCGGAGCGAAACAGCTGAG............................................................................................21200.0511000
................................................................................................................................................................................................................................................CTCTGGAAGCCGTACTTGGCGGATT.................25200.0510010
............................................................................................................................................................................................................................................AGCTCTCTGGAAGCCGTACTTGGCGGC...................27200.0510010
.......................................................................................................................................................................................................................................AC-GGAGCTCTCTGGAAGCCGTACTTG........................26200.0511000
..................................................................................................................................................................................................................................AGGGAAC-GGAGCTCTCTGGAAGCCG..............................25200.0511000
.................................................................................................................................................................................................................................................TCTGGAAGCCGTACTTGGCGG....................21200.0510010
..........................................................................................................................................................................................................................................GGAGCTCTCTGGAAGCCGTACTTGGC......................26200.0511000
............................................................................................................................................................................................................................................AGCTCTCTGGAAGCCGTACTTGGCGGCAG.................29200.0510010
..........................................................................................................................................GGATGCGGATGACTGTCCATGGTGCT......................................................................................................................26200.0511000
..........................................................................................................................AGCGCTTTGGACACGAGGATGCGC........................................................................................................................................24200.0511000
droSim2
----------------------------------------------------------------------------------TAGCGGGCATGGATGCTTCAGGAGCTACCT--------GGCTAGGTTTGGCCACGACGACGACAGCCACTGCTCAGAATGCGGCGTCGAC------GAGACGGCTGAGCACATCATCTTTAATT----------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
dm3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATTATTCTTAATTGTCCGCTACTCGACCACG-ACAGGA---AAGGTTTCATGGAGGACCT------------AGTGGACCCGTCGATCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................ACG-ACAGGA---AAGGTTTCATGGAGGA................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CG-ACAGGA---AAGGTTTCATGGA...................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................G-ACAGGA---AAGGTTTCATGGAGGACC..............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000
..............................................................................................................................................................................................................................CG-ACAGGA---AAGGTTTCATGGAGGACA..............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................ACAGGA---AAGGTTTCATGGAG..................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000
................................................................................................................................................................................................................................................TCATGGAGGACCT------------AGTGGAC..........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................ACG-ACAGGA---AAGGTTTCATGG....................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CG-ACAGGA---AAGGTTTCATGGAGGAC...............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CG-ACAGGA---AAGGTTTCATGGAGGA................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TTTCATGGAGGACCT------------AGTGGACCC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................ATGGAGGACCT------------AGTGGACCCGTC.....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CATGGAGGACCT------------AGTGGACCCGTC.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................G-ACAGGA---AAGGTTTCATGGAGGACA..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CGCTACTCGACCACG-ACAGGA---AAGGT...........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................CAGGA---AAGGTTTCATGGAGGACA..............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CG-ACAGGA---AAGGTTTCATGG....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................ACG-ACAGGA---AAGGTTTCATG.....................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TACTCGACCACG-ACAGGA---AAGGTT..........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................GTTTCATGGAGGACCT------------AGTGG............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................ACG-ACAGGA---AAGGTTTCATGGA...................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TCATGGAGGACCT------------AGTGGACCC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTCATGGAGGACCT------------AGTGGACCCGTCGAT..2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
-----------------------------------------------------------------------------------A-----------------------------------------GATTTGGCCACGATGACGACGGAAACTGCACACTCTGTGGCGGAAAA------GAAACGACGGAGCACTTTTTGCTCACGTGTCCGCGTTTTGTAG-CA-AAAGGG---ATGGAGTTCTGGACGGAAT----------------------------CSizeHit CountTotal NormTotal
No Reads
droBia1
--------------------------------------------------------------------------------------------------------------CT--------GACTAGATTCGGCCACGACGACGACCACAGCTATCCACAATGCGGATCAGAA------GA-----------ATATACCCTTCACGCGCCCACGGTTTGAGC-----------------------------------------------GGACCCTACTGCCCSizeHit CountTotal NormTotal
No Reads
droTak1
-----------------------------------------------------------------------------------AGCAGACATGGATGCTTCAGGAGCTACCT--------GACCAGATTCGGTCACGACGACGACCACAGCTGCCCCCAATGCGGAGTGGAG------GAGACCGCCGAGCACGTGATCTTCACCTGCCCACGGTTTGAGCGTG-AAAGGG---AAGAATTCCTAGGCGAGAC------------CAGGGACCCTGTTGCCCSizeHit CountTotal NormTotal
No Reads
droEle1
-----------------------------------------------------------------------------------AGCGGGCATGGTTGCTTAAGGAGCTACCT--------A-ATAGGTTTGGCCACGACGATGACCCTAGCTGCCCGCAATGCGGTGTTGAG------GAAACGGCGGAGCACATCATCTTCACCTGTCCACGGTTTGACCGCG-ACAGGG---ATGAATTCATGGGCGAGAC------------CAGAGACCCGACAGCGCSizeHit CountTotal NormTotal
No Reads
droAna3
-----------------------------------------------------------------------------------AGCGGCCACGGTTGCTTCAGAAGCTACCT--------TTTCAAATTTGGTCATGACGACGACCCAAGGTGCCCGGCATGCGGCGTAGAA------GAAACTGCGGAGCACGTGGTCTTGGACTGCCCACGGTTCACAGCTC-CAAGGC--AAAGACTTCTTGG-GGATGT------------ACAGACGGCGGAACTCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................GCTACCT--------TTTCAAATTTGGTCATGAC...............................................................................................................................................2690.333300000
...................................................................................................................................................................................AAACTGCGGAGCACGTGGTCTTG................................................................................2390.222200000
................................................................................................................................................................................................................................................TCTTGG-GGATGT------------ACAGACGGCGGAAC...2670.141100000
...............................................................................................................................................................................................................................................TTCTTGG-GGATGT------------ACAGACGGCGGAAC...2770.141100000
........................................................................................................................................................................................................................................................GATGT------------ACAGACGGCGGAACTCC2280.131100000
...................................................................................................................................................................................................GGTCTTGGACTGCCCACGGTTCACAGC............................................................2780.131100000
...............................................................................................................................................................................................................................................TTCTTGG-GGATGT------------ACAGACGGCGG......2480.131100000
...................................................................................................................................................................................................................CGGTTCACAGCTC-CAAGGC--AAAGACT..........................................2680.131100000
........................................................................................................................................................................................................................................................GATGT------------ACAGACGGCGGAACT..2080.131100000
...........................................................................................................................................................................................................................................AGACTTCTTGG-GGATGT------------ACAGA............2280.131100000
....................................................................................................................................................................................AACTGCGGAGCACGTGGTCTTGG...............................................................................2390.111100000
..................................................................................................................................................CAAGGTGCCCGGCATGCGGCGTAGAA------A.......................................................................................................2790.111100000
.........................................................................................................GCTACCT--------TTTCAAATTTGGTCATGACGAC............................................................................................................................................2990.111100000
.......................................................................................................................................................................TAGAA------GAAACTGCGGAGCACGTGGTCT..................................................................................2790.111100000
................................................................................................................................................................TGCGGCGTAGAA------GAAACTGCGGAG............................................................................................2490.111010000
.......................................................................................................................................................................................TGCGGAGCACGTGGTCTTGG...............................................................................2090.111100000
................................................................................................................................................................TGCGGCGTAGAA------GAAACTGCGGAGCACG........................................................................................2890.111100000
.........................................................................................................GCTACCT--------TTTCAAATTTGGTCATGA................................................................................................................................................2590.111100000
......................................................................................................................................ATGACGACGACCCAAGGTGCCCG.............................................................................................................................2390.111100000
...................................................................................................................................GTCATGACGACGACCCAAGGTGCC...............................................................................................................................2490.111010000
.......................................................................................................................................TGACGACGACCCAAGGTGCCCGGCATG........................................................................................................................2790.111100000
.......................................................................................................................................................TGCCCGGCATGCGGCGTAGAA------GAAAC...................................................................................................2690.111100000
.......................................................................................................................................................................................TGCGGAGCACGTGGTCTTGGACTGCCC........................................................................2790.111100000
..............................................................................................................................................GACCCAAGGTGCCCGGCATGCGG.....................................................................................................................2390.111010000
....................................................................................................................................................................................AACTGCGGAGCACGTGGTCTTGGACTGCC.........................................................................2990.111100000
...........................................................................................................................................GACGACCCAAGGTGCCCGGCATGCGGCG...................................................................................................................2890.111100000
.........................................................................................................GCTACCT--------TTTCAAATTTGGTCATGACGA.............................................................................................................................................2890.111100000
.......................................................................................................................................................................................TGCGGAGCACGTGGTCTTGGACTGCC.........................................................................2690.111010000
..............................................................................................................................................GACCCAAGGTGCCCGGCATGCGGC....................................................................................................................2490.111010000
....................................................................................................................................................................................AACTGCGGAGCACGTGGTCTTGGAC.............................................................................2590.111010000
droBip1
-----------------------------------------------------------------------------------AGCGGCCACGGATGCTTCAGGAGCTACCT--------GTTCAAATTTGGACAAGACGACGACCCAAGATGCCCGGAATGCGGGGTGGAC------GAGACGGCGGAACACGTGGTTCTGGACTGCCCACGCTTTTCAGTCC-CCAGGC---GGAGACTCCTAGGGGAAGT------------ATCGACGGTGGACCTCASizeHit CountTotal NormTotal
No Reads
droPer2
-----------------------------------------------------------------------------------GGCG-----------------------------------------------------------------------------ACGCCACT------GAAGACGCTGAGCACATCATTTTTCATTGTGGGCGCTTCGCACTTA-AGAGGG---AGGAGCTGTGGCGAGCCGC---CGGCGGGCAGCTCACGCCGAACAACCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................GCACTTA-AGAGGG---AGGAGCTGTGG.....................................2460.503030000
........................................................................................................................................................................................................................CGCACTTA-AGAGGG---AGGAGCTG........................................2260.332020000
........................................................................................................................................................................................................................CGCACTTA-AGAGGG---AGGAGCTGTGG.....................................2560.171010000
........................................................................................................................................................................................................................CGCACTTA-AGAGGG---AGGAGCT.........................................2160.171010000
.........................................................................................................................................................................................................................GCACTTA-AGAGGG---AGGAGCT.........................................2060.171010000
.....................................................................................................................................................................................................TTTTTCATTGTGGGCGCTTCGCACT............................................................2560.171010000
........................................................................................................................................................................................................................CGCACTTA-AGAGGG---AGGAG...........................................1960.171010000
.............................................................................................................................................................................................................TGTGGGCGCTTCGCACTTA-AGAG.....................................................2360.171010000
........................................................................................................................................................................................................................CGCACTTA-AGAGGG---AGGAGCTT........................................2260.171010000
...............................................................................................................................................................................................................TGGGCGCTTCGCACTTA-AGAGGG---AG..............................................2560.171010000
.........................................................................................................................................................................................................................GCACTTA-AGAGGG---AGGAGCTG........................................2160.171010000
.........................................................................................................................................................................................................................GCACTTA-AGAGGG---AGGAGCTGTG......................................2360.171010000
................................................................................................................................................................................................................GGGCGCTTCGCACTTA-AGAGGG---AGGA............................................2660.171010000
...................................................................................................................................................................................AAGACGCTGAGCACATCATTTTTC...............................................................................24130.152020000
...................................................................................................................................................................................AAGACGCTGAGCACATCATTTTT................................................................................23130.081010000
........................................................................................................................................................................CACT------GAAGACGCTGAGCACATCAT....................................................................................24150.071010000
.......................................................................................................................................................................CCACT------GAAGACGCTGAGCACATCA.....................................................................................24150.071010000
...................................................................................................................................................................................AAGACGCTGAGCACATCATT...................................................................................20170.061010000
...................................................................................................................................................................................................................................................................CGGGCAGCTCACGCCGAACA...20200.051010000
droWil2
-----------------------------------------------------------------------------------G--------------------------------------------------------------------------------------AC------GAGACGGCCGAACATGTCCTCTTCAAGTGCGGACGCTTCGAAACCG-AGAGAG---AACACCTCGAGGCGGAA-C-----------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................CGGCCGAACATGTCCTCTTCAAG.............................................................................23110.27303000
.............................................................................................................................................................................................................................CCG-AGAGAG---AACACCTCGAGGCGG.................................24120.25303000
.......................................................................................................................................................................................................TTCAAGTGCGGACGCTTCGAAACCG-AGA......................................................28120.17220000
.................................................................................................................................................................................................................................AGAGAG---AACACCTCGAGGCGGAA-C-----------------------------24120.17202000
.......................................................................................................................................................................................................TTCAAGTGCGGACGCTTCGAAACCG-A........................................................26120.17200020
.................................................................................................................................................................................................................GACGCTTCGAAACCG-AGAGAG---AACACC..........................................27120.17202000
...........................................................................................................................................................................................................................AACCG-AGAGAG---AACACCTCGAGGC...................................24120.17202000
.................................................................................................................................................................................................................................AGAGAG---AACACCTCGAGGCGGA................................22120.17211000
...........................................................................................................................................................................................................................AACCG-AGAGAG---AACACCTCGAGG....................................23120.17202000
.................................................................................................................................................................................................GTCCTCTTCAAGTGCGGACGCTTCG................................................................25110.09101000
...........................................................................................................................................................................................GAACATGTCCTCTTCAAGTGCGGA.......................................................................24110.09100010
.......................................................................................................................................................................................GGCCGAACATGTCCTCTTCAAG.............................................................................22110.09101000
......................................................................................................................................................................................CGGCCGAACATGTCCTCTTCAA..............................................................................22110.09101000
.............................................................................................................................................................................................ACATGTCCTCTTCAAGTGCGGA.......................................................................22110.09100010
..............................................................................................................................................................................................................................CG-AGAGAG---AACACCTCGAGGCGG.................................23120.08101000
...................................................................................................................................................................................................................CGCTTCGAAACCG-AGAGAG---AACA............................................23120.08101000
.................................................................................................................................................................................................................GACGCTTCGAAACCG-AGAGAG---AA..............................................23120.08100100
.........................................................................................................................................................................................................................GAAACCG-AGAGAG---AACACCTCGAGGCG..................................27120.08101000
.........................................................................................................................................................................................................................GAAACCG-AGAGAG---AACACCTCGAGG....................................25120.08100010
.............................................................................................................................................................................................................TGCGGACGCTTCGAAACCG-AGAGAG---................................................25120.08100010
.............................................................................................................................................................................................................................CCG-AGAGAG---AACACCTCGAGGC...................................22120.08101000
.................................................................................................................................................................................................................................AGAGAG---AACACCTCGAGGCGGAA-..............................23120.08101000
.............................................................................................................................................................................................................................CCG-AGAGAG---AACACCTCGAGG....................................21120.08101000
..................................................................................................................................................................................................................ACGCTTCGAAACCG-AGAGAG---AACAC...........................................25120.08101000
.................................................................................................................................................................................................................GACGCTTCGAAACCG-AGAGAG---AACAC...........................................26120.08101000
..................................................................................................................................................................................................................ACGCTTCGAAACCG-AGAGAG---AAC.............................................23120.08101000
....................................................................................................................................................................................................................GCTTCGAAACCG-AGAGAG---AACA............................................22120.08101000
.............................................................................................................................................................................................................................CCG-AGAGAG---AACACCTCGAGGCG..................................23120.08101000
............................................................................................................................................................................................................................ACCG-AGAGAG---AACACCTCGAGG....................................22120.08101000
...........................................................................................................................................................................................................AGTGCGGACGCTTCGAAACCG-.........................................................21120.08101000

Generated: 05/18/2015 at 12:31 AM