ID:

dya_1242

 Coordinate:

4:1242540-1242690 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.0 -16.5 -16.5

Flybase annnotation

CDS [Dyak\GE14568-cds]; exon [dyak_GLEANR_14686:3]; intron [Dyak\GE14568-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DYakRCHelitron+
Hoyak2DNAhAT-Ac-
mature
  1. dya_727  3L:7509843-7509870 +
  2. 3L:22359949-22359976 +
  3. 3L:22532859-22532886 +
  4. 3L:22623304-22623331 +
  5. 2L:20952372-20952399 +
  6. 2R:4342314-4342341 +
  7. 2R:4807656-4807683 +
  8. X:17214930-17214957 +
  9. 3R:822235-822262 +
  10. 3R:3094666-3094693 +
  11. 3R:4838313-4838340 +
  12. 4:1074854-1074881 +
  13. dya_1242  4:1242549-1242576 +
  14. v2_chr2L_random_002:2495-2522 +
  15. v2_chr2L_random_028:333534-333561 +
  16. v2_chr2L_random_028:1702435-1702462 +
  17. v2_chrX_random_041:100723-100750 +
  18. v2_chrX_random_041:212705-212732 +
  19. v2_chrUn_001:285306-285333 +
  20. v2_chrUn_111:3355-3382 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTTGAAATTTCTCCTTCGCACTTTCACTAGCTGATAACGGGTATCAGATAGTCGAGGAACTCGACTATAGCGTTCTCTCTTGTTATTTATTTTCATTTTATTCATCTCTGGTACCTGACAACTACACTTATCATATTTGGGCTACATTTTCTTAAAAAAGAAAACTATTTATCGCAAATATTTTTATATTTTTACTTGTAGGTCTATTTAATTTGATGCACTCATCTACTGAGGCGAAAGCGGAAATGTAT
**************************************************((((((...)))))).((((((........))))))........................((((((((..................))))).))).(((((((....)))))))((((.......((((((....))))))......))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 M043
female body
.............................GCTGATAACGGGGATCAGC........................................................................................................................................................................................................... 19 2 3 0.33 1 1 0
...........................................................CTCGACTATAGCGTTCTCTCTTGTTATT.................................................................................................................................................................... 28 0 20 0.10 2 0 2

Anti-sense strand reads

CAACTTTAAAGAGGAAGCGTGAAAGTGATCGACTATTGCCCATAGTCTATCAGCTCCTTGAGCTGATATCGCAAGAGAGAACAATAAATAAAAGTAAAATAAGTAGAGACCATGGACTGTTGATGTGAATAGTATAAACCCGATGTAAAAGAATTTTTTCTTTTGATAAATAGCGTTTATAAAAATATAAAAATGAACATCCAGATAAATTAAACTACGTGAGTAGATGACTCCGCTTTCGCCTTTACATA
**************************************************((((((...)))))).((((((........))))))........................((((((((..................))))).))).(((((((....)))))))((((.......((((((....))))))......))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M026
head
 M043
female body
.....................................GCCCATAGTCTATCAGCTC................................................................................................................................................................................................... 19 0 20 0.05 1 1 0
............TGAAGCGTGAAAGTGATC............................................................................................................................................................................................................................. 18 1 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 4:1242490-1242740 + dya_1242 GTTGA--AATTTC------------TCCTTCGCACTTTC-------------ACTAGCTGA-TAACGGGTATCAGATAGTCGAGG-AACTCGAC-----TATAGCGTTCTCTCTT-GT------------------------------------------------------------TATTTATTT-TC---------------------ATTTTATTCATCTCTG-----------------------------GTACCTGA---------------------------------------------------------------------CAACTACACTTATCATATTTGGGC-------------------------------T-------------------------------------------------------------------------------------------ACATTTTCTT-----------------------A-------------AAAAA--GAAA-ACTATTT-ATCGCAA-AT-ATTTTTATAT----------TTTTACTT--------GTAGG---------------TC------------------TATTTAATTTGATGCACTCA----TCT--AC---TGAGGCGAAAGCGGAAATGTAT
droEre2 scaffold_4512:103686-103932 - ATTAT--AATTAT------------TTCTTGGCACTCCC-------------ACTATTTGAGTAGTGGGTATC-----GACGAGG-AACTCGAC-----TTAATCGTACCCTTTT-GT------------------------------------------------------------ATACT-GCTAAATTCGTTGTTTAAATATAT---ATTTTATATATATGTCCAAACAGCCATATAAATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCA---CCA-A-ACA--GCAAAACTATTT-ATCGAAA-AT-ATTTTTACAT----------TCTTATTT--------TTAGG---------------TC------------------TATTTAATTTGATGCACTCA----TCT--AC---TGAGGCAAAAGCGGAAATGTAT
droSec2 scaffold_40:197173-197366 + TTAAA--AATTTG------------TTT-TTG-AGTTTC-------------GTTACTTAATTTTC-----------GGACAAGT-C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGAAA-TTGTTTATAAGCTCCCCAACTGCAAATACCA---------------------------------------------------------------------------------------T--------A------------------------------------CATTTTCAT-----------------------A-------------AAAGA--TCAA-ACTATTT-ATTGCAA-AT-ATTTGTAAAT----------TCTTATTT--------GTAGG---------------TC------------------TATTTAATTTGATGCACTCA----ACA--AC---TGAGACGAAAGCGGAAATGTAT
droSim2 2r:2886159-2886412 - TG--A--AATTTC------------GCGTTCGCATACAC-------------ACTAACTGAGTAACCGGTAATTGATAGTCGCTG-AACTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TTTTA-ACTATGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTATTATTTT-TATGAAATATATTTTGAAGAATG--TAT--------------TTACTTTTTTTTGGAAAATTTGTT-------------------------------------------------------------------------------TAAAATTACAAAA--GTTATAAAA-ACAATTT-----------------CAGATCACAACTTTATTTTATTT--------ATAAG---------------TT------------------GAAGTAA--TGATGAACTTA----ATTTTAA---TGATATAA------------AA
dm3 chrU:4480990-4481203 - TG--A--AATTTC------------GCGTTCGCATTCAC-------------TATAGCTGAGTAGC--GTATCTGATAGTCGGGG-AACTCGAC-----TATAGCATTCTTAT-T-GT------------------------------------------------------------TTTTTATATTTTTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCCTTTT-----AAATTTC--TATTAACTTGCAAAATACCGACCCAAAACCAACTAAAACTGGCCCAAAT-----------------------------------------------T--TTAG-AACATTT--TTGTAT-AT-TTTTTCATAA----------CTTTTTTA--------TTTTG---------------TC------------------TTTTCGACT----------------------------------------------T
droEug1 scf7180000409230:403033-403278 - ATTTC--C--------------------------------------------ACTAG-TAAGTAATGGGTATCTTATAGTCGCGG-CACTCGAC-----TATAGCGTTTCCTCTT-GT------------------------------------------------------------TTTCA-TCTTTTTTC-CCC--AGAGTTGCTCTT---------------T-------------------------------GCTGTTATTAGAAAAAAAACACAAACAAACACCTTTCCTAAGACAGGTCT-------------------------T-ATATGT-----------------------------------GCTATATCTG---------------TATAT---------------------------------------------------------------------------------------------------------------------ATAT--ATA--T----------------TAT-AT-CTTTATATAT----------CTTTCTAT--------ATATA---------------TC------------------TTTCT--------ATATATATCTCTCT--A----TATAGCAAAAGGGAAAGCCAAT
droBia1 scf7180000302143:779430-779685 - GTTGC--TGCTTGAATATCTCCATTTCCCTTTTGCTCCC-------------TTAAGCTTAGTAACAAGTATCTGATAGTCGAGG-CACTCGAC-----TATAGCTTTCATCCTTAATTATTTAT-TAA--TTTAATGTAG-------------------------------------------------------------------------------------G-----------------------------GTACGT--------------------------------------------TA-------------------------T-AAATTATCA-----------AC------------------------TACTT---------------TAAAT---------------------------------------------------------------------------------------------------------------------GAAT--ATA--AAAA-ACTATTT--------------TAATGTTG----------CTTGCCAA--------AATTA---------------TCTTTCCTTAATTTGCCACCTTACATAT-TGGCACTAACG-ATTTTT--AT---TTAGTAAAAAGCTTTATTTTAC
droTak1 scf7180000415774:10325-10522 + TCT-----------------------CCTTCGCATTCCC-------------TTTAGCTGAGTAACGGGTATTTGATAGTCGGGG-CACCCGAC-----TATAGCGTTCTCTCTT-GT------------------------------------------------------------TTTTA-TTGTTTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTGCTGATGATTTTGGGTGATATTTCGGCGA--------------------------------------------------------------------------------------------------------------------------------------------T-A--CATA-TATATAT---------AT-TTTTTTACAG----------TTAT--AC--------TTAGG---------------GC------------------TTCTAAA---GGTGTATACT----TAC--AG---TTAGGGGAGAGT--------GG
droEle1 scf7180000491104:464633-464838 - A---------------------------------------------------------------------------TAGTCGGTG-CACTCGAC-----AGTAGCGTTCCTTCTA-GT------------------------------------------------------------TTTTA-TTTCTTAA--------------------TATGAATGGTTTCTG-------CCATCTATTTATCGTACTAATC----------------------------------------------------ATACGATTATTTTTGACGATTTTTTGCGCAATGGAAAAGA-----------------------------T--------------------------------------------------AGATTCT-------------------------------------------------------------------------------TAAAAGTTTAAAA--ATC-----------------------TT-ATTTTTACAT----------------GT--------GTACA---------------CT------------------GA-------TCATGCTTTAA----AAT--GT---TGC-----GGTCGGACATTTAT
droRho1 scf7180000779538:154241-154476 - TCT-----------------------CCCTCGCACTACC-------------TTTACCTGAGTAACGGGTATCTGATAGTCGGGG-CACCCGAC-----TATAGCGTTCTCTCTT-GTTTTCTTT-TTAAATTCA------------A---------------------------------------------------------------------CGGGCGTTTT-----------------------------GCACAGGTAT---------------------------------------------------------------------AATAGAACAATTATTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAT---GAAA--ATA--GAGA-AATGTTTAAT--CAA-AT-TTAGATGCAT----------TTTCAGCG--------GCACA---------------CT------------------TTTCACACTTTCCACAATCA----TCT--GCGGTTAACGATAAAGTGGAAATTTA-
droFic1 scf7180000448688:469-618 + T--------------------------------------------------------------AACGGATATCTGATAGTCGAGG-CACTTGAC-----TATAGCGTTACCACAA-AC------------------------------------------------------------GTTTA-TCAAAATCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTTTTTTAATAT-AAGAAAGAATGTTTTGCTGATAATGACATTTCTATATTTGTATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTT--------TTAGA---------------TT------------------CCTTTTGTTTTA------------------------------------------CG
droKik1 scf7180000301359:558-690 - ATT---------------------------------------------------------------------------------------CGAT-----TTTAGTATTCTCGGTG-GTTATTTTTATTTTATTCA------------A---------------------------------------------------------------------AGTTTATCCT-----------------------------GGATTTATTT---------------------------------------------------------------------TATTATTGGCTT-------------------------------------------------------------------------------------------------------------------------------------ATTTCATC------------------------------------------------T---GGATTT-ATTTAAT-TT-ATTTTTATAT----------TTGAATTT--------ATTTG---------------TT------------------TATTTGA-----------------------------------------------TT
droAna3 scaffold_13417:3892439-3892620 - AATGGCAAATTT------------------TTTGCCATCAAAGCTTGGGTGGAATATATGCGAACCAGGTATCATATAATTGGG--AACTTAAC-----TATAGCCTTCCGTTCTTGT------------------------------------------------------------TCTTTC-GTCAG----------------TTTTC------CGATCTTTTT-----------------------------ATAGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------A------------------------------------TTATTTTAT-----------------------A-------------AAA------------ATTT--TTATAAAATAATTTATTTTT----------TTTTACTT--------TTAG--------------------------------------------------------------------------------------TTTTAG
droBip1 scf7180000396812:48746-48895 - GTGGA--A----------------------------------------------GAGATGAGTACCGGGTATAATATAGTCGGGA-AACTCGAC-----TATAGCCGTCCTTTCGTGTTTTTTTT-TTG--TTCTTGGTAG--------------------------------------------------------------------------GA-----ATCGG-----------------------------AACGAAATTT----------ATACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATA-AACATTT------------------------------------------TGACTTATGAA----------------------------------------------------------------AT---TAAATT--ATTCTAAAATTTTT
dp5 3:8099402-8099487 - G------------------------------------------------------------------GGTATCCCTCAGTCGAGA-CACTCTCC-----TCTATCGTTCCTACTA-GT------------------------------------------------------------TTTTT-TTTTTTTTT-------------------TTTTTATTATTTCTC---G-------------------------CTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGAC----AA
droPer2 scaffold_66:322726-322921 + ATCAC--AAATCC------------ACTTTTATATCATC-------------TACATATGACTATCAGATAATGTATTATTAGAT-AATGTA-T-----GTT---AATCTTTTTT-GT------------------------------------------------------------TATTTC-TTTTTAA--------------------TTTTCGTAATTTTTA-----------------------------TTATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------A------------------------------------TAATTAAATTACATTGGCTGTTATATATGATTG-------------A-AAA--ACGA--------------------ATTTTTCTTT----------TTTAATATTTTCTCTTTCACA---------------AA--------------------------------------------------------------------TATTTA
droWil2 scf2_1100000004943:4433427-4433502 - GCTTT--CTT------------------------------------------------------------------CCGTTGAGTACTT---------------------------------------------------------------------------------------------------TC---------------------ATTTTATTCATATCTG-----------------------------TTATTTAA----------------------------------------------------------------------------------------------------------ACCAACATCATTTTGCTCT-------------------------------------------------------------------------------------------ATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT
droVir3 scaffold_12937:84791-84898 + GTTAC--GGTTTG------------GGCTGTGCGTTG---------------------------ATCACTAATTGACAATCGGGA-CAAACAGCTTAAATATAGAAATTTGCTACTGT------------------------------------------------------------AATGTATTG-TT---------------------CTTTTAGGTAAGCCTG-----------------------------GTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC
droMoj3 scaffold_6496:25901064-25901252 + G------------------------------------------------------------------GGTATCTCCTAGTCGAGCAGTCTCGAC-----TGGAGCCTTCTTACTT-GT------------------------------------------------------------TTTTTATTTTTTTGG-TGC--GGACTATATATT---------------T-------------------------------------TT---------------------------------------------------------------------T---------------GTGGGA-------------------------------A------------------------------------AAAAGTTTTT-------------------------------------------------------------------------------AAGAAATCCAAAA--ATA--TTGA-TATATCG---------AT-ATTTTTATAG----------TTGC--AT--------ATAAA---------------AT------------------AATATAT--TGATA---TGA----TAT--AT---TGCCCT--GATAGAAAATATAT
droGri2 scaffold_15203:8493336-8493550 + G------------------------------------------------------------------GGTATCTTGTAGTCGAGCTCACTCGAC-----TATGGCATTCTTACTT-GTTATAAATAATTTATTCA-GTTAAGATTATATGTGCATTTGATGCCGTAACTGCATTTAACCCTTAA-GTCTG----------------CTATT------CGAT----------------------------------------ATTA-----------------------------------------------------------------------------A----GAACTTAAAC-------------------------------T-------------------------------------------------------------------------------------------GCTTCCTCTT-----------------------A-------------AAA-A--TAAA-AATATTT-AT---------TATTATGGAA----------ATAA--AT--------TTGAGATTTTCAACAATAATTC------------------TTTACA------------------------------------------------AT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
GTTGA--AATTTC------------TCCTTCGCACTTTC-------------ACTAGCTGA-TAACGGGTATCAGATAGTCGAGG-AACTCGAC-----TATAGCGTTCTCTCTT-GT------------------------------------------------------------TATTTATTT-TC---------------------ATTTTATTCATCTCTG-----------------------------GTACCTGA---------------------------------------------------------------------CAACTACACTTATCATATTTGGGC-------------------------------T-------------------------------------------------------------------------------------------ACATTTTCTT-----------------------A-------------AAAAA--GAAA-ACTATTT-ATCGCAA-AT-ATTTTTATAT----------TTTTACTT--------GTAGG---------------TC------------------TATTTAATTTGATGCACTCA----TCT--AC---TGAGGCGAAAGCGGAAATGTATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................CTCGAC-----TATAGCGTTCTCTCTT-GT------------------------------------------------------------TATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.10202000000000
droEre2
ATTAT--AATTAT------------TTCTTGGCACTCCC-------------ACTATTTGAGTAGTGGGTATC-----GACGAGG-AACTCGAC-----TTAATCGTACCCTTTT-GT------------------------------------------------------------ATACT-GCTAAATTCGTTGTTTAAATATAT---ATTTTATATATATGTCCAAACAGCCATATAAATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCA---CCA-A-ACA--GCAAAACTATTT-ATCGAAA-AT-ATTTTTACAT----------TCTTATTT--------TTAGG---------------TC------------------TATTTAATTTGATGCACTCA----TCT--AC---TGAGGCAAAAGCGGAAATGTATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................TAATCGTACCCTTTT-GT------------------------------------------------------------ATACT-GCTAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.....................................................................................................................T------------------------------------------------------------ATACT-GCTAAATTCGTTGTTTAAATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.........................................................................................TCGAC-----TTAATCGTACCCTTTT-G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..................................................................................AGG-AACTCGAC-----TTAATCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
......................................................TATTTGAGTAGTGGGTATC-----GACGAGG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
....T--AATTAT------------TTCTTGGCACTCCC-------------ACTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGCAAAAGCGGAAATG...1920.5010000010
droSec2
TTAAA--AATTTG------------TTT-TTG-AGTTTC-------------GTTACTTAATTTTC-----------GGACAAGT-C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGAAA-TTGTTTATAAGCTCCCCAACTGCAAATACCA---------------------------------------------------------------------------------------T--------A------------------------------------CATTTTCAT-----------------------A-------------AAAGA--TCAA-ACTATTT-ATTGCAA-AT-ATTTGTAAAT----------TCTTATTT--------GTAGG---------------TC------------------TATTTAATTTGATGCACTCA----ACA--AC---TGAGACGAAAGCGGAAATGTATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........ATTTG------------TTT-TTG-AGTTTC-------------GTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
droSim2
TG--A--AATTTC------------GCGTTCGCATACAC-------------ACTAACTGAGTAACCGGTAATTGATAGTCGCTG-AACTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TTTTA-ACTATGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTATTATTTT-TATGAAATATATTTTGAAGAATG--TAT--------------TTACTTTTTTTTGGAAAATTTGTT-------------------------------------------------------------------------------TAAAATTACAAAA--GTTATAAAA-ACAATTT-----------------CAGATCACAACTTTATTTTATTT--------ATAAG---------------TT------------------GAAGTAA--TGATGAACTTA----ATTTTAA---TGATATAA------------AASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................TCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.4529000000290000000000
.................................ATACAC-------------ACTAACTGAGTAACCGGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAA-ACAATTT-----------------CAGATCACAACTT..................................................................................................................2511.00100000000010000000
..................................................................................................................................................................................TTTTA-ACTATGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTATTATT....................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
........................................................................................CTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.7515000000150000000000
.........................................................................................TCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.7014000000140000000000
........ATTTC------------GCGTTCGCATACAC-------------AC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.50200002000000000000
.......................................................................................ACTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.45900000054000000000
..............................................................................................................................................................................................TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGTATTATTTT-TATGAAATA........................................................................................................................................................................................................................................................................................................................2630.33100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TGATGAACTTA----ATTTTAA---TG....................2130.33100000000001000000
...................................................................................TG-AACTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2940.25100000001000000000
...................................................................................TG-AACTCGAC-----TATAGCATTCTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25100000000000001000
.......................................................................................ACTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.25500300000020000000
.........................................................................................TCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.20400000010210000000
......................................................................................AACTCGAC-----TATAGCATTCTCTCTT-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.20400000004000000000
...................................................................................TG-AACTCGAC-----TATAGCATTCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.20100000000000010000
..................................................................................................................................................................................................................................................................................................................................................................GTTTGTATTATTTT-TATGA............................................................................................................................................................................................................................................................................................................................1950.20100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGAAAATTTGT................................................................................................................................................................................................................................................................1560.17100000000001000000
.........................................................................................TCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TTTTA-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.17100000010000000000
..........................................................................................CGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TTTTA-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13100000010000000000
TG--A--AATTTC------------GCGTTCGCATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.10100000000001000000
......................................................................................AACTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200020000000000000
......................................................................................AACTCGAC-----TATAGCATTCTCTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200200000000000000
......................................................................................AACTCGAC-----TATAGCATTCTCTCTT-G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000000200000000
......................................................................................AACTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10201000000010000000
........................................................................................CTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000020000000000
........................................................................................CTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28180.06100000000100000000
.........................................................................................TCGAC-----TATAGCATTCTCTCTT-G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000001000000000
......................................................................................AACTCGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100010000000000000
TG--A--AATTTC------------GCGTTCGCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
....................................................................................G-AACTCGAC-----TATAGCATTCTCTCTT-G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000001000000000
..........................................................................................CGAC-----TATAGCATTCTCTCTT-GT------------------------------------------------------------TTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000010000000000
TG--A--AATTTC------------GCGTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000010000000000
dm3
TG--A--AATTTC------------GCGTTCGCATTCAC-------------TATAGCTGAGTAGC--GTATCTGATAGTCGGGG-AACTCGAC-----TATAGCATTCTTAT-T-GT------------------------------------------------------------TTTTTATATTTTTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCCTTTT-----AAATTTC--TATTAACTTGCAAAATACCGACCCAAAACCAACTAAAACTGGCCCAAAT-----------------------------------------------T--TTAG-AACATTT--TTGTAT-AT-TTTTTCATAA----------CTTTTTTA--------TTTTG---------------TC------------------TTTTCGACT----------------------------------------------TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................TGAGTAGC--GTATCTGATAGTCGGGG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001110000000000000000000000000000000000000000000000000000000000001000000000000000011000000000000000001000000
..........................................................TGAGTAGC--GTATCTGATAGTCGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000
..........................................................TGAGTAGC--GTATCTGATAGTCGGGG-A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000
..........................................................TGAGTAGC--GTATCTGATAGTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
.....................................................................TATCTGATAGTCGGGG-AACTCGAC-----TA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26202.2044000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000040000000000000000000000000000000000000000000000000000000000000000000000000030000000015000000000000000000001900000
..........................................................TGAGTAGC--GTATCTGATAGTCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................ATTCAC-------------TATAGCTGAGTAGC--G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
...........................................................GAGTAGC--GTATCTGATAGTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
......................................................TAGCTGAGTAGC--GTATCTGATAGTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................TATAGCTGAGTAGC--GTATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000
............................................................................TAGTCGGGG-AACTCGAC-----TA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19201.4529000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TATCTGATAGTCGGGG-AACTCGAC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.302600000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000001000000000000000000000000000000000000000000000600000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................AGTAGC--GTATCTGATAGTCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................ACTCGAC-----TATAGCATTCTTAT-T-GT------------------------------------------------------------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AC-------------TATAGCTGAGTAGC--GTATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.............................TCGCATTCAC-------------TATAGCTGAGTAGC--GTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTC--TATTAACTTGCA...................................................................................................................................................................................................................................................1611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
TG--A--AATTTC------------GCGTTCGCATTCAC-------------TATAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAAAACCAACTAAAACTG......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TATAGCTGAGTAGC--GTATCTGATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTCAC-------------TATAGCTGAGTAGC--GTATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TAGC--GTATCTGATAGTCGGGG-AACTATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TGAGTAGC--GTATCTGATAGTCGGGG-AC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................TCGAC-----TATAGCATTCTTAT-T-GT------------------------------------------------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TGAGTAGC--GTATCTGATAGTCGGAT-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCGACCCAAAACCAACTAAAACT.......................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATTTC------------GCGTTCGCATTCAC-------------TAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................CAC-------------TATAGCTGAGTAGC--GTATCTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTTGCAAAATACCGACCCAAAAC..................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCGTTCGCATTCAC-------------TATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................TTCAC-------------TATAGCTGAGTAGC--GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................GCTGAGTAGC--GTATCTGATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..................................TTCAC-------------TATAGCTGAGTAGC--GTATCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATACCGACCCAAAACCAACTAA...........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CTTAT-T-GT------------------------------------------------------------TTTTTATATTTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGCATTCAC-------------TATAGCTGAGTAGC--GTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CATTCAC-------------TATAGCTGAGTAGC--GTATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TC------------GCGTTCGCATTCAC-------------TATAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TGAGTAGC--GTATCTGATAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TAGC--GTATCTGATAGTCGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TCGAC-----TATAGCATTCTTAT-T-GT------------------------------------------------------------TTTTTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TCTGATAGTCGGGG-AACTCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.95190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000100000070000
.....................................................................TATCTGATAGTCGGGG-AACTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................TCTGATAGTCGGGG-AACTCGAC-----TA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000200000000000000000000000000000000000000000000000000000000000003000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000300000000000000000000000000
.....................................................................TATCTGATAGTCGGGG-AACTCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TATCTGATAGTCGGGG-AACTCGAC-----TAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TATCTGATAGTCGGGG-AACTCGAC-----T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2550000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................TGATAGTCGGGG-AACTCGAC-----T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000
................................................................GC--GTATCTGATAGTCGGGG-AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GC--GTATCTGATAGTCGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................C--GTATCTGATAGTCGGGG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................C--GTATCTGATAGTCGGGG-AACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................C--GTATCTGATAGTCGGGG-AAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................TATCTGATAGTCGGGG-AACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..........................................................................GATAGTCGGGG-AACTCGAC-----T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................ATCTGATAGTCGGGG-AACTCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT-----------------------------------------------T--TTAG-AACATTT--TA............................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
droEug1
ATTTC--C--------------------------------------------ACTAG-TAAGTAATGGGTATCTTATAGTCGCGG-CACTCGAC-----TATAGCGTTTCCTCTT-GT------------------------------------------------------------TTTCA-TCTTTTTTC-CCC--AGAGTTGCTCTT---------------T-------------------------------GCTGTTATTAGAAAAAAAACACAAACAAACACCTTTCCTAAGACAGGTCT-------------------------T-ATATGT-----------------------------------GCTATATCTG---------------TATAT---------------------------------------------------------------------------------------------------------------------ATAT--ATA--T----------------TAT-AT-CTTTATATAT----------CTTTCTAT--------ATATA---------------TC------------------TTTCT--------ATATATATCTCTCT--A----TATAGCAAAAGGGAAAGCCAATSizeHit CountTotal NormTotal
No Reads
droBia1
GTTGC--TGCTTGAATATCTCCATTTCCCTTTTGCTCCC-------------TTAAGCTTAGTAACAAGTATCTGATAGTCGAGG-CACTCGAC-----TATAGCTTTCATCCTTAATTATTTAT-TAA--TTTAATGTAG-------------------------------------------------------------------------------------G-----------------------------GTACGT--------------------------------------------TA-------------------------T-AAATTATCA-----------AC------------------------TACTT---------------TAAAT---------------------------------------------------------------------------------------------------------------------GAAT--ATA--AAAA-ACTATTT--------------TAATGTTG----------CTTGCCAA--------AATTA---------------TCTTTCCTTAATTTGCCACCTTACATAT-TGGCACTAACG-ATTTTT--AT---TTAGTAAAAAGCTTTATTTTACSizeHit CountTotal NormTotal
No Reads
droTak1
TCT-----------------------CCTTCGCATTCCC-------------TTTAGCTGAGTAACGGGTATTTGATAGTCGGGG-CACCCGAC-----TATAGCGTTCTCTCTT-GT------------------------------------------------------------TTTTA-TTGTTTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTGCTGATGATTTTGGGTGATATTTCGGCGA--------------------------------------------------------------------------------------------------------------------------------------------T-A--CATA-TATATAT---------AT-TTTTTTACAG----------TTAT--AC--------TTAGG---------------GC------------------TTCTAAA---GGTGTATACT----TAC--AG---TTAGGGGAGAGT--------GGSizeHit CountTotal NormTotal
No Reads
droEle1
A---------------------------------------------------------------------------TAGTCGGTG-CACTCGAC-----AGTAGCGTTCCTTCTA-GT------------------------------------------------------------TTTTA-TTTCTTAA--------------------TATGAATGGTTTCTG-------CCATCTATTTATCGTACTAATC----------------------------------------------------ATACGATTATTTTTGACGATTTTTTGCGCAATGGAAAAGA-----------------------------T--------------------------------------------------AGATTCT-------------------------------------------------------------------------------TAAAAGTTTAAAA--ATC-----------------------TT-ATTTTTACAT----------------GT--------GTACA---------------CT------------------GA-------TCATGCTTTAA----AAT--GT---TGC-----GGTCGGACATTTATSizeHit CountTotal NormTotal
No Reads
droRho1
TCT-----------------------CCCTCGCACTACC-------------TTTACCTGAGTAACGGGTATCTGATAGTCGGGG-CACCCGAC-----TATAGCGTTCTCTCTT-GTTTTCTTT-TTAAATTCA------------A---------------------------------------------------------------------CGGGCGTTTT-----------------------------GCACAGGTAT---------------------------------------------------------------------AATAGAACAATTATTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAT---GAAA--ATA--GAGA-AATGTTTAAT--CAA-AT-TTAGATGCAT----------TTTCAGCG--------GCACA---------------CT------------------TTTCACACTTTCCACAATCA----TCT--GCGGTTAACGATAAAGTGGAAATTTA-SizeHit CountTotal NormTotal
No Reads
droFic1
T--------------------------------------------------------------AACGGATATCTGATAGTCGAGG-CACTTGAC-----TATAGCGTTACCACAA-AC------------------------------------------------------------GTTTA-TCAAAATCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTTTTTTAATAT-AAGAAAGAATGTTTTGCTGATAATGACATTTCTATATTTGTATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTT--------TTAGA---------------TT------------------CCTTTTGTTTTA------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droKik1
ATT---------------------------------------------------------------------------------------CGAT-----TTTAGTATTCTCGGTG-GTTATTTTTATTTTATTCA------------A---------------------------------------------------------------------AGTTTATCCT-----------------------------GGATTTATTT---------------------------------------------------------------------TATTATTGGCTT-------------------------------------------------------------------------------------------------------------------------------------ATTTCATC------------------------------------------------T---GGATTT-ATTTAAT-TT-ATTTTTATAT----------TTGAATTT--------ATTTG---------------TT------------------TATTTGA-----------------------------------------------TTSizeHit CountTotal NormTotal
No Reads
droAna3
AATGGCAAATTT------------------TTTGCCATCAAAGCTTGGGTGGAATATATGCGAACCAGGTATCATATAATTGGG--AACTTAAC-----TATAGCCTTCCGTTCTTGT------------------------------------------------------------TCTTTC-GTCAG----------------TTTTC------CGATCTTTTT-----------------------------ATAGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------A------------------------------------TTATTTTAT-----------------------A-------------AAA------------ATTT--TTATAAAATAATTTATTTTT----------TTTTACTT--------TTAG--------------------------------------------------------------------------------------TTTTAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GTGGA--A----------------------------------------------GAGATGAGTACCGGGTATAATATAGTCGGGA-AACTCGAC-----TATAGCCGTCCTTTCGTGTTTTTTTT-TTG--TTCTTGGTAG--------------------------------------------------------------------------GA-----ATCGG-----------------------------AACGAAATTT----------ATACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATA-AACATTT------------------------------------------TGACTTATGAA----------------------------------------------------------------AT---TAAATT--ATTCTAAAATTTTTSizeHit CountTotal NormTotal
No Reads
dp5
G------------------------------------------------------------------GGTATCCCTCAGTCGAGA-CACTCTCC-----TCTATCGTTCCTACTA-GT------------------------------------------------------------TTTTT-TTTTTTTTT-------------------TTTTTATTATTTCTC---G-------------------------CTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGAC----AASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................A-GT------------------------------------------------------------TTTTT-TTTTTTTTT-------------------TTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550050000000
....................................................................................................................GT------------------------------------------------------------TTTTT-TTTTTTTTT-------------------TTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2040400000000
....................................................................................................................GT------------------------------------------------------------TTTTT-TTTTTTTTT-------------------TTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010000000
..................................................................................................................A-GT------------------------------------------------------------TTTTT-TTTTTTTTT-------------------TTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000000
droPer2
ATCAC--AAATCC------------ACTTTTATATCATC-------------TACATATGACTATCAGATAATGTATTATTAGAT-AATGTA-T-----GTT---AATCTTTTTT-GT------------------------------------------------------------TATTTC-TTTTTAA--------------------TTTTCGTAATTTTTA-----------------------------TTATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------A------------------------------------TAATTAAATTACATTGGCTGTTATATATGATTG-------------A-AAA--ACGA--------------------ATTTTTCTTT----------TTTAATATTTTCTCTTTCACA---------------AA--------------------------------------------------------------------TATTTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................TCTTTTTT-GT------------------------------------------------------------TATTTC-TTTTTAA--------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.251010000
droWil2
GCTTT--CTT------------------------------------------------------------------CCGTTGAGTACTT---------------------------------------------------------------------------------------------------TC---------------------ATTTTATTCATATCTG-----------------------------TTATTTAA----------------------------------------------------------------------------------------------------------ACCAACATCATTTTGCTCT-------------------------------------------------------------------------------------------ATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GTTAC--GGTTTG------------GGCTGTGCGTTG---------------------------ATCACTAATTGACAATCGGGA-CAAACAGCTTAAATATAGAAATTTGCTACTGT------------------------------------------------------------AATGTATTG-TT---------------------CTTTTAGGTAAGCCTG-----------------------------GTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................TG-TT---------------------CTTTTAGGTAAGCCTG-----------------------------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
................................CGTTG---------------------------ATCACTAATTGACAATCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................T---------------------CTTTTAGGTAAGCCTG-----------------------------GTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C.2111.001000000000000000000000000000000000000001000000000000000000000000
................................................................ATCACTAATTGACAATCGGGA-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
...................................TG---------------------------ATCACTAATTGACAATCGGGA-CAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000100000000000000000000000000000000000000
..................................TTG---------------------------ATCACTAATTGACAATCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
........GTTTG------------GGCTGTGCGTTG---------------------------AT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
G------------------------------------------------------------------GGTATCTCCTAGTCGAGCAGTCTCGAC-----TGGAGCCTTCTTACTT-GT------------------------------------------------------------TTTTTATTTTTTTGG-TGC--GGACTATATATT---------------T-------------------------------------TT---------------------------------------------------------------------T---------------GTGGGA-------------------------------A------------------------------------AAAAGTTTTT-------------------------------------------------------------------------------AAGAAATCCAAAA--ATA--TTGA-TATATCG---------AT-ATTTTTATAG----------TTGC--AT--------ATAAA---------------AT------------------AATATAT--TGATA---TGA----TAT--AT---TGCCCT--GATAGAAAATATATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................TCGAC-----TGGAGCCTTCTTACTT-GT------------------------------------------------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.459900000
...................................................................................GCAGTCTCGAC-----TGGAGCCTTCTTACTT-G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
.................................................................................GAGCAGTCTCGAC-----TGGAGCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
droGri2
G------------------------------------------------------------------GGTATCTTGTAGTCGAGCTCACTCGAC-----TATGGCATTCTTACTT-GTTATAAATAATTTATTCA-GTTAAGATTATATGTGCATTTGATGCCGTAACTGCATTTAACCCTTAA-GTCTG----------------CTATT------CGAT----------------------------------------ATTA-----------------------------------------------------------------------------A----GAACTTAAAC-------------------------------T-------------------------------------------------------------------------------------------GCTTCCTCTT-----------------------A-------------AAA-A--TAAA-AATATTT-AT---------TATTATGGAA----------ATAA--AT--------TTGAGATTTTCAACAATAATTC------------------TTTACA------------------------------------------------ATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:26 AM