ID:

dya_1211

 Coordinate:

4:431855-432005 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dyak_GLEANR_14667:10]; CDS [Dyak\GE14548-cds]; intron [Dyak\GE14548-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
DNAREP1_DMRCHelitron+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTTTTCGACTCAGTGCTATTAATTCTTGTGGACGAGGAGAATGGGGAGAGGTTTGTAATTATTTTATTTTATTCAAGATATTTAAAACATATAAAAAAAGTATATGTTGCTTTATGAATTTAATAGTCATATACATTCGTGGTAGTGTTTTAAAATAATTTAAAAGTACGTAAAAAAGTACGTGAAGAGAACTTTTCTACCATATAAGCAAATATATTCTTGATCAAGATCACTAGGCGATTCCGTCTGGC
**************************************************...........(((((..(((((........(((((((((((.......(((((((..((((((......))).)))))))))).......)).))))))))))))))..)))))((((........))))(((((((....))))).)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 M043
female body
 V052
head
 M056
embryo
.....................ATTCTTGTGGACGAGGAGAAT................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
..........CAGTGCTATTAATTCTTGT.............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0
..................TTAATTCTTGTGGACGAGGAGAATGGG.............................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0
..........................................GGATAGAGGATTGTAATTATT............................................................................................................................................................................................ 21 3 3 0.67 2 0 2 0 0
.................................GAGGAGAATGGGGAGAGATAT..................................................................................................................................................................................................... 21 2 2 0.50 1 0 0 0 1
.........................................................................................................................................................................GTGAAAAAGTACGTGAAA................................................................ 18 2 20 0.25 5 1 4 0 0
...........................................GATAGAGCTTTGTAATTATT............................................................................................................................................................................................ 20 3 20 0.10 2 0 2 0 0
...................................................................................................................................................................................AAGTGAAAAGAACTTTTC...................................................... 18 2 20 0.10 2 0 0 0 2
............................................................................................AAAAAAAGTATAAGCTGCT............................................................................................................................................ 19 2 12 0.08 1 0 0 0 1
..........................................................................................................................................................................TGAAAAAGTACGTGAAGT............................................................... 18 2 20 0.05 1 0 1 0 0

Anti-sense strand reads

CAAAAGCTGAGTCACGATAATTAAGAACACCTGCTCCTCTTACCCCTCTCCAAACATTAATAAAATAAAATAAGTTCTATAAATTTTGTATATTTTTTTCATATACAACGAAATACTTAAATTATCAGTATATGTAAGCACCATCACAAAATTTTATTAAATTTTCATGCATTTTTTCATGCACTTCTCTTGAAAAGATGGTATATTCGTTTATATAAGAACTAGTTCTAGTGATCCGCTAAGGCAGACCG
**************************************************...........(((((..(((((........(((((((((((.......(((((((..((((((......))).)))))))))).......)).))))))))))))))..)))))((((........))))(((((((....))))).)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
...................................................................................................................................................................................................AGATGGTTAATTCGATTATA.................................... 20 3 17 0.12 2 2

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 4:431805-432055 + dya_1211 GTTTTCGACTCAGTGC-------TATTAAT--------------------TCTTGTGGACGAGGAGAAT-GGGGAGAGGTTTGTAATTA----------------------------TTTTATTTTA-------TT--------------------------C----------------------------------------------AAGATATTTAAAACATATAAAAAAAGTA-TATGTTGCTTTATGAATTTAATAGTC----------------------------------------------------------------------------------------------------------------ATATACATTCGTGGT--------------AGTGTTTTAAAATAA--------TTTAAAAGTACGT--------AAAAAA-GTACGTGAAGA-GAACTTTTCTACCATATA-AGCAAATATATTCTTGATCAAGATCACTAGGCGATT------CCGTCTGGC
droEre2 scaffold_4512:902224-902477 - GTTTCAGGTTGAGTGC-------TATCAAT--------------------TCTTGCGGACGAGGAGAAT-GGGGAGAGGTTTGTGATTC----------------------------ACTAATTTTA-------TTGGCG-----------ACA---TTATTC----------------------------------------------AAG--ATTTAAAATATGTACTTC---TT-TTTATTACTTTAAAAATTTAATAGTC----------------------------------------------------------------------------------------------------------------ATATACATTTC------------------AGTATATTGAATTAA--------TAT--------GTAAAAAAGTATGTAAAATT-TAGAAGAGAA-CTTTCCTACCATATC-AGCATTTATATTGTTGGTCAAGATCACTGGGCGAGT------TAATCTGCC
droSec2 scaffold_30:124021-124226 + GTTTTCGACTGAGTGC-------TATCAAT--------------------TCTTGCGGACGAGGAGAAT-GGGGAGAGGTTTGTGATGC----------------------------ACTTATTTTA-------TT--------------------------C----------------------------------------------AAGATATTTAAAACATATACTTA---TT-TTTATTGCTTTATACATTTA-TA--C----------------------------------------------------------------------------------------------------------------ACATCCATTACTGGT------------GGTGTATATTAAAGTAA--------CTTAAATGT------------ATGTAAAATG-TTTAAGGAA---TTTTCTATCATATGAAGGAAATGT------------------------------------------
droSim2 3l:17871775-17871983 - dsi_28691 GTTTTCGGCTGAGTGC-------TATCAAT--------------------TCTTGCGGACGAGGAGAAT-GGGGAGAGGTTTGTGATGC----------------------------ACTTATTTTA-------TT--------------------------C----------------------------------------------AAGATATTTAAAACATATACTTA---TT-TTTATTGCTTTATACATCTAATAGTT----------------------------------------------------------------------------------------------------------------ACATCCATTACTGGT------------GGTGTATATTAAAGTAA--------CTTAAATGT------------ATGTAAAATG-TTTAAGGAA---TTTTCTATCATATGAAGGAAATGT------------------------------------------
dm3 chr4:391934-392161 + GTTTTCGACTGAGTGC-------TATCAAT--------------------TCTTGCGGACGAGGAGAAT-GGGGAGAGGTTTGTGATGC----------------------------ACTTATTTTA-------TT--------------------------C----------------------------------------------AAGATATTTGAAACATATACTTC---TT-TTTATTGCTTTATACATTAAATAATT----------------------------------------------------------------------------------------------------------------ATATCCATTACTGGT------------GGAGTATATTAAAGTAA---------TTAAAAGT------------ATGTAAAATG-TAGAAGGAA---CTTTATATCATATAAAGCATATATACTTTTGATAATGATCACTA----------------------
droEug1 scf7180000409510:30843-31077 - ATTTATGTTTGT--------------------------------------------AAACGGAGCA-------------------------------------------------------------------------------------AAT---TCATTTAACTTTTATAATTTATTATATATTTTAAACTACTT-----------AATAAATAAAAAACATTTACATT---TA-CATTTTA-------------T-----TTATT-----------------------------------------------------------------------------------------------------------ATACCCGTTACTCGTA--GAGT-A-AAAGGGTATACTAGATTCG--------TTGAAAAGT------------ATGTAACAGA-TAGAAGGAAGCTTTTGCGACCCTATAAAGTATATATATTCTTGATCAGGATCAATAGCGAAGT------CGATTGAGC
droBia1 scf7180000301495:555178-555417 + GTGCCA-------------------TTTAC--------------------TCT-----ACGAA--GAAC-AGGAATA-ATAAATAA------------------------ATAATTTCTTTATTTTA-------AT--------------------------A----------------------------------------------AAACTACCTAAAATGTATATTTT---CG-TTTCTCC--TTATCAAAT-------------------------------------------------------------------------------------------------AAACATAATT-------------ATATCCGTTACTCGTA--GAGT-A-AAAGGGTATACTAGACTCG--------ACGGAAAGT------------ATGCAACAGG-TAGAAGAAAACGTATCCGACCCCATAATGTATATATATTCTTGATCAGGATCACTAGCCGAGT------CGATCTAGC
droTak1 scf7180000415962:18098-18346 - GCTCTCAACGCACTGG-------TCCTAAGTGGAATTAGATTAGGAACGTTTTTGTAACAGTCCAACTT-TGCAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCAACTCGTGAAAATATAGTTTGTGGTAATTTAATT----------------------TAATTTAATT-------------ATACCCGTTACTTGTA--GAGT-A-AAAGGGTATATTAGATTCG--------TGCAAAAGT------------ATGTAACAGG-TAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGGGTCACTAGCCGAGT------CGATCTAGC
droEle1 scf7180000490691:2227-2460 - GCTTTGATTTCAATGC-------GA--AAT--------------------TGTTGTGACTTAAAATCAT-AAAATTATATTTGTT------------------------------------TTTATT-------TT--------------------------C----------------------------------------------AAGTTAGTTAAAG-CTATATTAT---TG-TTGTTTGCCCACTTGGCGC-------TT--------------------------------------------------------------------------------------------TTATT-------------ATACCCT-----TGC---------AG-AGGGTATTATAATTTCA--------GTCAGAAGT------------TTGCAACGCA-GTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCACTAGTAGAGT------CGATCTAGC
droRho1 scf7180000770177:71074-71302 - ATTTTTGGCTAAAAAT-------TATC--T--------------------TCTTGTTAAAGAAAAGCTT-AAATAAAGTTTTTTGTTTT----------------------------TGTAATTTTG-------TT--------------------------T----------------------------------------------GAGATAA---AAA----TATTT----------------TTATAA-----------------------------------------------------------------------------------------------------------ATTATATTAGTTTTTTATACCCT-----TGC---------AG-AGGGTGTTATAATTTTG--------GTCAGAAGT------------TTGTAACGCA-GTGAAGGAGACGTTTCCGACCCAATAAAGTATATATATTCTTCATCAGGATCAATAGGGGAGT------CGATATAGC
droFic1 scf7180000454115:1054550-1054739 + ATTATTA------------------------------------------------------------------------------------------------------------------TAATTA-------TT--------------------------T----------------------------------------------AAAATATTTATTATATATATAA----TA-TATAATATTATATA-ATAAAA-----TTGTT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGCA--GAGC-A--AAGAGTATTATAATTTCA--------GTCAGAAGT------------TTGCAACGCA-GTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAGCATCACGATCAGAAT------CCAAATATG
droKik1 scf7180000302242:12976-13217 - CAGTGCCTAGCAATTC-------TGTTTTG--------------------A------GTGAAGGGGCGT-GGGGGAGAGTAAATGGTTA----------------------------AATTTTATTG-------TT--------------------------C--------------------------AAAATGATAAATAAATTGTGAACG--CAGTATACACATATATT---TC-TTTACTGC------------------TTTTT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGC------------AGGGTATTATAATTTCA--------GTCAGAAGT------------TTGCAACGCA-GTGAAGGAGACCTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAACAGCCGAGT------CGATCTAGC
droAna3 scaffold_13228:5945-6182 + GTTCACGGATCTCTTC-------TATAATT--------------------TTTTCTGGATC------TT-GGTGTTATTTATATTTATC----------------------------TCC--------------T------TTACT----------------A----------------------------------------------AACTTTTGAAAATCTCGTAGAAGTAGTT-ATTATATATTAATGAA-TAAG-----TTATT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGC---------AG-AGGGTGTTATAATTTTG--------GTCAAAAGT------------GTGCAACGCA-GTGAAGGAGACATCTCCGACCCTATTAAGTATATATATTCTTGATCAGGATCACCTCCTGAGT------CGATATGAG
droBip1 scf7180000393164:6024-6219 + GTTTTCGACTTGCGGC-------TATTAAT--------------------TCGTGTGGGCGTGGAGAAT-GGGGAGAGGTATGTATAAC----------------------------TCCT-----------------------------------------------------------------------------------------------------------------------------------------------TTTTT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGC---------AG-AGGGTATTATAATTTTG--------ACCAAAAGT------------GTGCAACGCA-GTGAAGGAGACATCTCCGACCCTATATAGTATATATATTCTTGAACAGGATCACCTCCTGAGTTGATGTCCGTCTGTC
dp5 Unknown_group_346:1175-1364 + TTATTTC-----------------------------------------------------------------------------------------------------------------------A-------TT--------------------------T----------------------------------------------TGTAAAATTTATGTATAAGTTTA---TTATATGTTGC------------------TTATT-----------------------------------------------------------------------------------------------------------ATACCCGATACTCAAAATGAGT-A-TTGGGGTATATTAGATTTGTGGTAAA-AGTGGATGT------------GTGTAACGTC-CAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGT------CGATTGAGC
droPer2 scaffold_62:96652-96857 - TTATAATTATTATTAT-------TA------------------------------------------------------------------------TATTGT-----------------TAATTAA-------TT--------------------------------------------------------------------------ATAACTTCAAAGCACGTACCTA---TG-TTCG----------------------TTTTT-----------------------------------------------------------------------------------------------------------ATACCCGATACTCAAAATGAGT-A-TTGGGGTATATTAGATTTGTGGTAAA-AGTGGATGT------------GTGTAACGTT-CAGAAGGAATCGTCTCCGACCACATAAAGTACATATATTTTTGATCAGCATCAATAGCCGAGT------CGATTGAGC
droWil2 scf2_1100000004954:5169030-5169263 - GTTTTTAAGAAAAT-CAGAGTTATGTGAAT--------------------TCCAGGGCGGAAGGGGGCGTGGCAAAAAGTTGG---AAC----------------------------AATTATTTTC-------TGCGCGCTAACTAAACAAGTATATAACCC----------------------------------------------------------------------------------------AA-----------ATTTG-----------------------------------------------------------------------------------------------------------ATAACAT-----AGG-----GG-G-AAATGGTATATTAAAGTAG--------CCAAAACGT------------ATGTAACAGG-CAGAAGGAAGCTTCTCCGACCCCATAAAGTATATATATTCTTGTTCAGGATCAACAACCGAGT------CGATCTAGC
droVir3 scaffold_13324:1919371-1919583 - CTTGCAGA-TGAGCAA-------CAAAAA-------------------------------------------------ATT-TTAATTC------AGTGTTCTTTATCAAATAATTTACTTA----A-------TT--------------------------T----------------------------------------------AACAAA----AAA--------------------------TATATATTCAATATTT---AT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGC---------AGAAGGGTATTTTAATACCC-----GTGTCGTGAAAT------------GTGTAATGCA-TAGAAGGAGACATCTCCGACCCCATAAAGTATTTATATTCTTGATCAGCATCAATAGTCGAGT------CGATCTAGC
droMoj3 scaffold_6474:61859-62060 + TTGTTA--------------------------------------------------------------------------------TGATATTATTGTATTCTTTCACAA---------TGATA-TCTATGTGGT------TAA------------------------------------------------------------------------TTAAAG-------------TG-TTTG----------------------TTATTATACCCTGAACCCATTG-------------------------------------------------------------------------------------------------------AAAATGGGAAA-TCAGGGTATAATGGTTTTG---------TGAAAAGT------------ATGTAACAGG-CAGAAGGAATCATCGCAGACCCCATAAAGTATATATATTCTTGATCAGGATGACGAGCTGAGT------CGATATGGC
droGri2 scaffold_15126:1818063-1818263 - TATTTAATTTCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATCTACAAAAATGTGAAATCATTAGAAAAAAATATATATGGAAGACGAATTTTTTAATATATTCAATTAAAATAAAT---------------------------------------------AAAATTATTTTTATTACA--------AGCATAAAT------------ATCGAAATCG-GAGAAGGAATCATCTTCGACTTCATAAAGTATATATATTCTTGATCAGGATCAACAGGCGAGT------TGATATAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
GTTTTCGACTCAGTGC-------TATTAAT--------------------TCTTGTGGACGAGGAGAAT-GGGGAGAGGTTTGTAATTA----------------------------TTTTATTTTA-------TT--------------------------C----------------------------------------------AAGATATTTAAAACATATAAAAAAAGTA-TATGTTGCTTTATGAATTTAATAGTC----------------------------------------------------------------------------------------------------------------ATATACATTCGTGGT--------------AGTGTTTTAAAATAA--------TTTAAAAGTACGT--------AAAAAA-GTACGTGAAGA-GAACTTTTCTACCATATA-AGCAAATATATTCTTGATCAAGATCACTAGGCGATT------CCGTCTGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................AT--------------------TCTTGTGGACGAGGAGAAT-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........CAGTGC-------TATTAAT--------------------TCTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000
.........................TTAAT--------------------TCTTGTGGACGAGGAGAAT-GGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
droEre2
GTTTCAGGTTGAGTGC-------TATCAAT--------------------TCTTGCGGACGAGGAGAAT-GGGGAGAGGTTTGTGATTC----------------------------ACTAATTTTA-------TTGGCG-----------ACA---TTATTC----------------------------------------------AAG--ATTTAAAATATGTACTTC---TT-TTTATTACTTTAAAAATTTAATAGTC----------------------------------------------------------------------------------------------------------------ATATACATTTC------------------AGTATATTGAATTAA--------TAT--------GTAAAAAAGTATGTAAAATT-TAGAAGAGAA-CTTTCCTACCATATC-AGCATTTATATTGTTGGTCAAGATCACTGGGCGAGT------TAATCTGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................GAGGAGAAT-GGGGAGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
.......GTTGAGTGC-------TATCAAT--------------------TCTTGCGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.........................TCAAT--------------------TCTTGCGGACGAGGAGAAT-GGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.........TGAGTGC-------TATCAAT--------------------TCTTGCGGACGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
..TTCAGGTTGAGTGC-------TATCAAT--------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..................................................TCTTGCGGACGAGGAGAAT-GGGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001
...................................................................AT-GGGGAGAGGTTTGTGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.............TGC-------TATCAAT--------------------TCTTGCGGACGAGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001
droSec2
GTTTTCGACTGAGTGC-------TATCAAT--------------------TCTTGCGGACGAGGAGAAT-GGGGAGAGGTTTGTGATGC----------------------------ACTTATTTTA-------TT--------------------------C----------------------------------------------AAGATATTTAAAACATATACTTA---TT-TTTATTGCTTTATACATTTA-TA--C----------------------------------------------------------------------------------------------------------------ACATCCATTACTGGT------------GGTGTATATTAAAGTAA--------CTTAAATGT------------ATGTAAAATG-TTTAAGGAA---TTTTCTATCATATGAAGGAAATGT------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................ATTACTGGT------------GGTGTATATTAAAGT........................................................................................................................2411.0010010
droSim2
GTTTTCGGCTGAGTGC-------TATCAAT--------------------TCTTGCGGACGAGGAGAAT-GGGGAGAGGTTTGTGATGC----------------------------ACTTATTTTA-------TT--------------------------C----------------------------------------------AAGATATTTAAAACATATACTTA---TT-TTTATTGCTTTATACATCTAATAGTT----------------------------------------------------------------------------------------------------------------ACATCCATTACTGGT------------GGTGTATATTAAAGTAA--------CTTAAATGT------------ATGTAAAATG-TTTAAGGAA---TTTTCTATCATATGAAGGAAATGT------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............TGC-------TATCAAT--------------------TCTTGCGGACGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000020001000000
.............TGC-------TATCAAT--------------------TCTTGCGGACGAGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000011100000000
...TTCGGCTGAGTGC-------TATCAAT--------------------TCTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000012000000000
.............TGC-------TATCAAT--------------------TCTTGCGGACGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000020000000000
..................................................TCTTGCGGACGAGGAGAAT-GGGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
..TTTCGGCTGAGTGC-------TATCAAT--------------------TCTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.............................T--------------------TCTTGCGGACGAGGAGAAT-GGGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
.............................T--------------------TCTTGCGGACGAGGAGAAT-GGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
...........................AAT--------------------TCTTGCGGACGAGGAGAAT-GGGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.........................TCAAT--------------------TCTTGCGGACGAGGAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000010000
.............TGC-------TATCAAT--------------------TCTTGCGGACGAGGAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...................................................CTTGCGGACGAGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.50100000000001000000
dm3
GTTTTCGACTGAGTGC-------TATCAAT--------------------TCTTGCGGACGAGGAGAAT-GGGGAGAGGTTTGTGATGC----------------------------ACTTATTTTA-------TT--------------------------C----------------------------------------------AAGATATTTGAAACATATACTTC---TT-TTTATTGCTTTATACATTAAATAATT----------------------------------------------------------------------------------------------------------------ATATCCATTACTGGT------------GGAGTATATTAAAGTAA---------TTAAAAGT------------ATGTAAAATG-TAGAAGGAA---CTTTATATCATATAAAGCATATATACTTTTGATAATGATCACTA----------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................T--------------------TCTTGCGGACGAGGAGAAT-GGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2317.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100200000101000
..................................................TCTTGCGGACGAGGAGAAT-GGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2317.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000020000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................TGCGGACGAGGAGAAT-GGGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................T--------------------TCTTGCGGACGAGGAGAAT-GGGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...TTCGACTGAGTGC-------TATCAAT--------------------TCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................T--------------------TCTTGCGGACGAGGAGAAT-GGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTTTCGACTGAGTGC-------TATCAAT--------------------TCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................T--------------------TCTTGCGGACGAGGAGAAT-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................T--------------------TCTTGCGGACGAGGAGAAT-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000
...........................................................CGAGGAGAAT-GGGGAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000
....TCGACTGAGTGC-------TATCAAT--------------------TCTTGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TGCGGACGAGGAGAAT-GGGGAGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............TGC-------TATCAAT--------------------TCTTGCGGACGAGGAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TCTTGCGGACGAGGAGAAT-GGGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................TCTTGCGGACGAGGAGAAT-GGGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................CTTGCGGACGAGGAGAAT-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGC-------TATCAAT--------------------TCTTGCGGACGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................CAAT--------------------TCTTGCGGACGAGGAGAAT-GGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TCTTGCGGACGAGGAGAAT-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................TCTTGCGGACGAGGAGAAT-GGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...TTCGACTGAGTGC-------TATCAAT--------------------TCTTGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CTTGCGGACGAGGAGAAT-GGGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TCTTGCGGACGAGGAGAAT-GGGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AT--------------------TCTTGCGGACGAGGAGAAT-GGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCGGACGAGGAGAAT-GGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GTGC-------TATCAAT--------------------TCTTGCGGACGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTTTTCGACTGAGTGC-------TA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................AT--------------------TCTTGCGGACGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................T--------------------TCTTGCGGACGAGGAGAAT-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TGCGGACGAGGAGAAT-GGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................TATCAAT--------------------TCTTGCGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................TGCGGACGAGGAGAAT-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTGAGTGC-------TATCAAT--------------------TCTTGCGGACGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTTCGACTGAGTGC-------TATCAAT--------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTTTCGACTGAGTGC-------TATCAAT--------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCGACTGAGTGC-------TATCAAT--------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTGAGTGC-------TATCAAT--------------------TCTTGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTTTTCGACTGAGTGC-------TATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TTGCGGACGAGGAGAAT-GGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................CGGACGAGGAGAAT-GGGGAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................C----------------------------------------------AAGATATTTGAAACATATACT....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TATCAAT--------------------TCTTGCGGACGAGGAGAAT-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGC-------TATCAAT--------------------TCTTGCGGACGAGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................CAAT--------------------TCTTGCGGACGAGGAGAAT-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCAAT--------------------TCTTGCGGACGAGGAGAAT-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTTTCGACTGAGTGC-------TATCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TATCAAT--------------------TCTTGCGGACGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................T--------------------TCTTGCGGACGAGGAGAAT-GGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ACGAGGAGAAT-GGGGAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.TTTTCGACTGAGTGC-------TATCAAT--------------------TCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGAGTGC-------TATCAAT--------------------TCTTGCGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTCGACTGAGTGC-------TATCAAT--------------------TCTTGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATCAAT--------------------TCTTGCGGACGAGGAGAAT-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................T--------------------TCTTGCGGACGAGGAGAAT-GGGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAT--------------------TCTTGCGGACGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................TTGCGGACGAGGAGAAT-GGGGAGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GC-------TATCAAT--------------------TCTTGCGGACGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...............C-------TATCAAT--------------------TCTTGCGGACGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................TATCAAT--------------------TCTTGCGGACGAGGAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTGAGTGC-------TATCAAT--------------------TCTTGCGGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................T--------------------TCTTGCGGACGAGGAGAAT-GGGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCGGACGAGGAGAAT-GGGGAGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTTCGACTGAGTGC-------TATCAAT--------------------TCTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTCGACTGAGTGC-------TATCAAT--------------------TCTTGCGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TTGCGGACGAGGAGAAT-GGGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTTTTCGACTGAGTGC-------TATCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTTTTCGACTGAGTGC-------TATCAAT--------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
ATTTATGTTTGT--------------------------------------------AAACGGAGCA-------------------------------------------------------------------------------------AAT---TCATTTAACTTTTATAATTTATTATATATTTTAAACTACTT-----------AATAAATAAAAAACATTTACATT---TA-CATTTTA-------------T-----TTATT-----------------------------------------------------------------------------------------------------------ATACCCGTTACTCGTA--GAGT-A-AAAGGGTATACTAGATTCG--------TTGAAAAGT------------ATGTAACAGA-TAGAAGGAAGCTTTTGCGACCCTATAAAGTATATATATTCTTGATCAGGATCAATAGCGAAGT------CGATTGAGCSizeHit CountTotal NormTotal
No Reads
droBia1
GTGCCA-------------------TTTAC--------------------TCT-----ACGAA--GAAC-AGGAATA-ATAAATAA------------------------ATAATTTCTTTATTTTA-------AT--------------------------A----------------------------------------------AAACTACCTAAAATGTATATTTT---CG-TTTCTCC--TTATCAAAT-------------------------------------------------------------------------------------------------AAACATAATT-------------ATATCCGTTACTCGTA--GAGT-A-AAAGGGTATACTAGACTCG--------ACGGAAAGT------------ATGCAACAGG-TAGAAGAAAACGTATCCGACCCCATAATGTATATATATTCTTGATCAGGATCACTAGCCGAGT------CGATCTAGCSizeHit CountTotal NormTotal
No Reads
droTak1
GCTCTCAACGCACTGG-------TCCTAAGTGGAATTAGATTAGGAACGTTTTTGTAACAGTCCAACTT-TGCAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCAACTCGTGAAAATATAGTTTGTGGTAATTTAATT----------------------TAATTTAATT-------------ATACCCGTTACTTGTA--GAGT-A-AAAGGGTATATTAGATTCG--------TGCAAAAGT------------ATGTAACAGG-TAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGGGTCACTAGCCGAGT------CGATCTAGCSizeHit CountTotal NormTotal
No Reads
droEle1
GCTTTGATTTCAATGC-------GA--AAT--------------------TGTTGTGACTTAAAATCAT-AAAATTATATTTGTT------------------------------------TTTATT-------TT--------------------------C----------------------------------------------AAGTTAGTTAAAG-CTATATTAT---TG-TTGTTTGCCCACTTGGCGC-------TT--------------------------------------------------------------------------------------------TTATT-------------ATACCCT-----TGC---------AG-AGGGTATTATAATTTCA--------GTCAGAAGT------------TTGCAACGCA-GTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCACTAGTAGAGT------CGATCTAGCSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTTTGGCTAAAAAT-------TATC--T--------------------TCTTGTTAAAGAAAAGCTT-AAATAAAGTTTTTTGTTTT----------------------------TGTAATTTTG-------TT--------------------------T----------------------------------------------GAGATAA---AAA----TATTT----------------TTATAA-----------------------------------------------------------------------------------------------------------ATTATATTAGTTTTTTATACCCT-----TGC---------AG-AGGGTGTTATAATTTTG--------GTCAGAAGT------------TTGTAACGCA-GTGAAGGAGACGTTTCCGACCCAATAAAGTATATATATTCTTCATCAGGATCAATAGGGGAGT------CGATATAGCSizeHit CountTotal NormTotal
No Reads
droFic1
ATTATTA------------------------------------------------------------------------------------------------------------------TAATTA-------TT--------------------------T----------------------------------------------AAAATATTTATTATATATATAA----TA-TATAATATTATATA-ATAAAA-----TTGTT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGCA--GAGC-A--AAGAGTATTATAATTTCA--------GTCAGAAGT------------TTGCAACGCA-GTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAGCATCACGATCAGAAT------CCAAATATGSizeHit CountTotal NormTotal
No Reads
droKik1
CAGTGCCTAGCAATTC-------TGTTTTG--------------------A------GTGAAGGGGCGT-GGGGGAGAGTAAATGGTTA----------------------------AATTTTATTG-------TT--------------------------C--------------------------AAAATGATAAATAAATTGTGAACG--CAGTATACACATATATT---TC-TTTACTGC------------------TTTTT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGC------------AGGGTATTATAATTTCA--------GTCAGAAGT------------TTGCAACGCA-GTGAAGGAGACCTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAACAGCCGAGT------CGATCTAGCSizeHit CountTotal NormTotal
No Reads
droAna3
GTTCACGGATCTCTTC-------TATAATT--------------------TTTTCTGGATC------TT-GGTGTTATTTATATTTATC----------------------------TCC--------------T------TTACT----------------A----------------------------------------------AACTTTTGAAAATCTCGTAGAAGTAGTT-ATTATATATTAATGAA-TAAG-----TTATT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGC---------AG-AGGGTGTTATAATTTTG--------GTCAAAAGT------------GTGCAACGCA-GTGAAGGAGACATCTCCGACCCTATTAAGTATATATATTCTTGATCAGGATCACCTCCTGAGT------CGATATGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACCTCCTGAGT------CGATATG..21200.80161600000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TG--------GTCAAAAGT------------GTGCAACGCA-..............................................................................21200.50101000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCACCTCCTGAGT------CGAT.....21200.50101000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------GTGCAACGCA-GTGAAGGAGACATCTC..............................................................27200.408800000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCA-GTGAAGGAGACATCTCC.............................................................22200.408000008
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCA-GTGAAGGAGACATCT...............................................................21200.357700000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATAATTTTG--------GTCAAAAGT------------GTGC.....................................................................................26200.153030000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACCTCCTGAGT------CGATAT...20200.153300000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGT------------GTGCAACGCA-GTGAAGGAGACAT.................................................................28200.102020000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATAATTTTG--------GTCAAAAGT------------GTGCAAC..................................................................................29190.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................TGC---------AG-AGGGTGTTATAATTT........................................................................................................................20200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGGATCAC........................22200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACCTCCTGAGT------CGATATGAG24200.051001000
........................................................................................................................................................................................................................................................................TTATT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGC---------AG-AGG....................................................................................................................................20200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-GTGAAGGAGACATCTCCGACCC........................................................24200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGACATCTCCGACCCTATT....................................................25200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTATATATATTCTTGATCAGG.............................24200.051010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCA-GTGAAGGAGACATCTCCGA...........................................................24200.051000001
droBip1
GTTTTCGACTTGCGGC-------TATTAAT--------------------TCGTGTGGGCGTGGAGAAT-GGGGAGAGGTATGTATAAC----------------------------TCCT-----------------------------------------------------------------------------------------------------------------------------------------------TTTTT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGC---------AG-AGGGTATTATAATTTTG--------ACCAAAAGT------------GTGCAACGCA-GTGAAGGAGACATCTCCGACCCTATATAGTATATATATTCTTGAACAGGATCACCTCCTGAGTTGATGTCCGTCTGTCSizeHit CountTotal NormTotal
No Reads
dp5
TTATTTC-----------------------------------------------------------------------------------------------------------------------A-------TT--------------------------T----------------------------------------------TGTAAAATTTATGTATAAGTTTA---TTATATGTTGC------------------TTATT-----------------------------------------------------------------------------------------------------------ATACCCGATACTCAAAATGAGT-A-TTGGGGTATATTAGATTTGTGGTAAA-AGTGGATGT------------GTGTAACGTC-CAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGT------CGATTGAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGT------CG.......2520108.40216802156120000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGT------C........242076.8515370153700000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAA-AGTGGATGT------------GTG......................................................................................21201.703400004000300
................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAA-AGTGGATG......................................................................................................19201.503000000030000
................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAA-AGTGGATGT------------GTC......................................................................................23201.352700000027000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTAAA-AGTGGATG......................................................................................................20200.951901000000090
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGATTTGTGGTAAA-AG............................................................................................................19200.751500000000150
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTAAA-AGTGGATGT------------GTG......................................................................................20200.601201200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCCCATA....................................................23200.501001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TATTAGATTTGTGGTAAA-AGTGGA........................................................................................................24200.4590000000090
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGT------CGATTG...25200.4080800000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATTTGTGGTAAA-AGTGG.........................................................................................................21200.4080000008000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAA-AGTGGATGT------------G........................................................................................19200.3570000004030
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCGA.................24200.3570700000000
.........................................................................................................................................................................................................................................................................TATT-----------------------------------------------------------------------------------------------------------ATACCCGATACTCAAAATGA..............................................................................................................................................24200.3060400000200
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCCATAA...................................................25200.2550050000000
.............................................................................................................................................................................................................................................................................................................................................................................................CGATACTCAAAATGAGT-A-TTGGGGTA.................................................................................................................................26200.2550500000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCATCAATAGCCGA.................26200.2550500000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGCA............................22200.2040400000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATCGTTTCCGACCCCATAAAG.................................................25200.1530000000300
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAAA-AGTGGATGT------------GTGTAACGT................................................................................25200.1530300000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCC...................19200.1530000000300
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATTTGTGGTAAA-AGTGGA........................................................................................................22200.1530300000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTAAA-AGTGGATGT------------.........................................................................................21200.1530000000030
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAATAGCC...................26200.1530300000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTAAA-AGTGGATGT------------G........................................................................................22200.1020000000020
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTAAA-AGTGGATGT------------GTGTAACG.................................................................................29200.1020000000020
.........................................................................................................................................................................................................................................................................TATT-----------------------------------------------------------------------------------------------------------ATACCCGATACTCAAAATG...............................................................................................................................................23200.1020110000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTC-CAGAAGGAATCGTTTCCGACCC........................................................27200.1020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGTGGTAAA-AGTGG.........................................................................................................18200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGTATATTAGATTTGTGGTAA................................................................................................................21200.0510000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTAAA-AGTGGAT.......................................................................................................19200.0510010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTCCGACCCCATAAAGTATATA...........................................26200.0510000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATCAATA......................20200.0510000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................TGAGT-A-TTGGGGTATATTAGATTTGTGG...................................................................................................................28200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCCGACCCCATAAAGTATATATA.........................................27200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAA-AGTGGATGT------------GTG......................................................................................23200.0510001000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCAAAATGAGT-A-TTGGGGTAT................................................................................................................................21200.0510000000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAA-AGTGGATGT------------GTGTAAC..................................................................................21200.0510001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AATGAGT-A-TTGGGGTATATTAGA..........................................................................................................................23200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAGCA............................20200.0510000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAA-AGTGGATGT------------GT.......................................................................................21200.0510010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-CAGAAGGAATCGTTTCCGACCCCAT.....................................................26200.0510000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACCCCATAAAGTATATATAT........................................24200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACCCCATAAAGTATATA...........................................21200.0510000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCATCAATAGCCGAG................27200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------GTGTAACGTC-CAGAAGGAATCGTT................................................................25200.0510000000010
droPer2
TTATAATTATTATTAT-------TA------------------------------------------------------------------------TATTGT-----------------TAATTAA-------TT--------------------------------------------------------------------------ATAACTTCAAAGCACGTACCTA---TG-TTCG----------------------TTTTT-----------------------------------------------------------------------------------------------------------ATACCCGATACTCAAAATGAGT-A-TTGGGGTATATTAGATTTGTGGTAAA-AGTGGATGT------------GTGTAACGTT-CAGAAGGAATCGTCTCCGACCACATAAAGTACATATATTTTTGATCAGCATCAATAGCCGAGT------CGATTGAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTATATTAGATTTGTGG...................................................................................................................21200.153000003
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------------GTGTAACGTT-CAGAAGGA......................................................................20200.102000002
........................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-AGTGGATGT------------GTGTAACGTT-..............................................................................22200.051000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAACGTT-CAGAAGGAAT....................................................................20200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AA-AGTGGATGT------------GTGTAACGTT-..............................................................................21200.051000001
droWil2
GTTTTTAAGAAAAT-CAGAGTTATGTGAAT--------------------TCCAGGGCGGAAGGGGGCGTGGCAAAAAGTTGG---AAC----------------------------AATTATTTTC-------TGCGCGCTAACTAAACAAGTATATAACCC----------------------------------------------------------------------------------------AA-----------ATTTG-----------------------------------------------------------------------------------------------------------ATAACAT-----AGG-----GG-G-AAATGGTATATTAAAGTAG--------CCAAAACGT------------ATGTAACAGG-CAGAAGGAAGCTTCTCCGACCCCATAAAGTATATATATTCTTGTTCAGGATCAACAACCGAGT------CGATCTAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGTTCAGGATCA.........................2520.50101000
.....TAAGAAAAT-CAGAGTTATGTGAAT--------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.10100010
.................................................................................................................................................TAAACAAGTATATAACCC----------------------------------------------------------------------------------------AA-----------ATTTG-----------------------------------------------------------------------------------------------------------A.................................................................................................................................................................26200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------ATGTAACAGG-CAGAAGGAAGCTTC................................................................25200.05100100
droVir3
CTTGCAGA-TGAGCAA-------CAAAAA-------------------------------------------------ATT-TTAATTC------AGTGTTCTTTATCAAATAATTTACTTA----A-------TT--------------------------T----------------------------------------------AACAAA----AAA--------------------------TATATATTCAATATTT---AT-----------------------------------------------------------------------------------------------------------ATACCCT-----TGC---------AGAAGGGTATTTTAATACCC-----GTGTCGTGAAAT------------GTGTAATGCA-TAGAAGGAGACATCTCCGACCCCATAAAGTATTTATATTCTTGATCAGCATCAATAGTCGAGT------CGATCTAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAGGAG.....................................................................23110.9110000010000000000000000001001310000011100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAGGAGAC...................................................................25110.9110000010100000000000000000102000000020210000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAGGAGACATC................................................................2880.383000000200000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAGGAGACA..................................................................2690.333000000000000000000000000100010000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAG.....................23200.306000000000000000000006000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAGGAGA....................................................................24110.273000000000000010000000000000010000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGTCGAGT------CG.......27200.255000000000000000000000000000100000031000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGTCGAGT------CGA......26200.204000000000000000000000000000010000020000100000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAGGA......................................................................22120.172000000000000000000000000001010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGTCGAGT------C........27200.153000000000000000000000000000000000030000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGTCGAGT------CG.......28200.153000000000000000000000000001000010000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGTCGAG................25200.153000000000000000000000000000300000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAGGAGACAT.................................................................2790.111000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGCA-TAGAAGGAGACATCTCC.............................................................2590.111001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAG........................................................................20190.112000000000000000000000000100000000000000100000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGTC...................25200.102000000000000000000000000002000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATCAATAGTCGAGA------.........27200.102000000200000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAT------------GTGTAATGCA-TAGAAGGAG.....................................................................24110.091000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAT------------GTGTAATGCA-TAGAAGGAGA....................................................................25110.091001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGAAAT------------GTGTAATGCA-TAGAAG........................................................................25120.081000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAGG.......................................................................21150.071000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAGGAGAA...................................................................25170.061000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATAGTCGAGT------CG.......26200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATAGTCGAG................21200.051000000001000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAATAGTCGAGT------CGAT.....21200.051000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGTCGAGT------CG.......25200.051000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAATAGTCGAGT------CGATCTA..23200.051000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAATAGTC...................26200.051000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCATCAATAGTCGAGT------CG.......22200.051000000001000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAATAGTCGAGT------C........18200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGTCGAGT------.........26200.051000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGTCGAGT------CGATCTAG.27200.051000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAATAGTCGAGT------CGATCTAG.26200.051000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGTCGAGT------CGATCT...25200.051100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCATCAATAGTCGAG................19200.051000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT------------GTGTAATGCA-TAGAAGGAGAT...................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
droMoj3
TTGTTA--------------------------------------------------------------------------------TGATATTATTGTATTCTTTCACAA---------TGATA-TCTATGTGGT------TAA------------------------------------------------------------------------TTAAAG-------------TG-TTTG----------------------TTATTATACCCTGAACCCATTG-------------------------------------------------------------------------------------------------------AAAATGGGAAA-TCAGGGTATAATGGTTTTG---------TGAAAAGT------------ATGTAACAGG-CAGAAGGAATCATCGCAGACCCCATAAAGTATATATATTCTTGATCAGGATGACGAGCTGAGT------CGATATGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................TTG----------------------TTATTATACCCTGAACCC................................................................................................................................................................................................................................................................21190.112200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGACGAGCTGAGT------CGAT.....22190.112100001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGG-CAGAAGGAATCATCG...............................................................23200.102000002
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAAGT------------ATGTAACAGG-CAGAAG........................................................................24200.102200000
...............................................................................................................................................................................................................................................TTG----------------------TTATTATACCCTGAACCCATTG-------------------------------------------------------------------------------------------------------.....................................................................................................................................................25100.101100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCCATAAAGTATATATATTCT.....................................23200.102000020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATGACGAGCTGAGT------CGAT.....24190.051000001
...............................................................................................................................................................................................................................................TTG----------------------TTATTATACCCTGAACCCA...............................................................................................................................................................................................................................................................22190.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATGACGAGCC...................24200.051000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATAAAGTATATATATTCTTGATC................................25200.051000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATGACGAGC....................23200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGGATGACGAGCTGA.................29200.051100000
.............................................................................................................................................................................................................................................................................................G-------------------------------------------------------------------------------------------------------AAAATGGGAAA-TCAGGGTATAAT.............................................................................................................................24200.051000001
................................................................................................................................................................................................................................................TG----------------------TTATTATACCCTGAACCCATT.............................................................................................................................................................................................................................................................23200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------ATGTAACAGG-CAGAAGGAATCATCG...............................................................26200.051100000
.................................................................................................................................................................................................................................................G----------------------TTATTATACCCTGAACCCATTG-------------------------------------------------------------------------------------------------------.....................................................................................................................................................23200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATGACGAGCTGAGT------C........24200.051000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGGATG..........................20200.051000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTG---------TGAAAAGT------------ATGTAACAGG-CAGAAG........................................................................27200.051000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATGACGAGCTGA.................27200.051000001
.........................................................................................................................................................................................................................................................................................CATTG-------------------------------------------------------------------------------------------------------AAAATGGGAAA-TCAGGGTATA...............................................................................................................................26200.051000001
........................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGGTTTTG---------TGAAAAGT------------.........................................................................................20200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATGACGAGC....................24200.051000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCGCAGACCCCATAAAGTATATATA.........................................28200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGGATGACGAGCTGAGT------.........24200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGAATCATCGCAGACC.........................................................21200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATGACGAGC....................21200.051000100
droGri2
TATTTAATTTCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATCTACAAAAATGTGAAATCATTAGAAAAAAATATATATGGAAGACGAATTTTTTAATATATTCAATTAAAATAAAT---------------------------------------------AAAATTATTTTTATTACA--------AGCATAAAT------------ATCGAAATCG-GAGAAGGAATCATCTTCGACTTCATAAAGTATATATATTCTTGATCAGGATCAACAGGCGAGT------TGATATAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:18 AM