ID:

dya_120

 Coordinate:

2R:12723683-12723748 +

 Confidence:

Known Ortholog

 Class:

Testes-restricted

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.8 -27.6 -27.6

Flybase annnotation

utr3 [utr3_minus_3800]; utr3 [utr3_minus_3799]

No Repeatable elements found

Sense Strand Reads

TCCTGGTAAGTGGCTTCCGATGTCCAGGACTCTTGGATCTGATTTTCCCAAGTGCTTAGTATCAGCAAGGTGTAATTTTTGTTTGGTTAAAGTACACGTTACTGGTACTACGTACTTCGAGAAACCTAACTACGGAGGATACAAAAAAATCGCCTGCAGTTTCAAG

*****************************************.(((((..((((((.(((((((((.((.(((((..(((((......)))))))))).)).))))))))).)))))).)))))....*************************************** 		Read size # Mismatch Hit Count Total Norm Total V120

male body		 M043

female body

 M056

embryo

 V046

embryo

 M026

head

 V058

head

 V052

head
........................................................TAGTATCAGCAAGGTGTAATTT........................................................................................ 22 0 1 346.00 346 283 31 22 6 1 1 2
........................................................TAGTATCAGCAAGGTGTAATT......................................................................................... 21 0 1 195.00 195 176 11 3 2 3 0 0
........................................................TAGTATCAGCAAGGTGTAAT.......................................................................................... 20 0 1 171.00 171 167 3 0 0 1 0 0
..........................................................................................AGTACACGTTACTGGTACTACG...................................................... 22 0 1 20.00 20 0 12 8 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAA........................................................................................... 19 0 1 16.00 16 15 0 0 0 0 1 0
........................................................TAGTATCAGCAAGGTGTAATTTA....................................................................................... 23 1 1 14.00 14 10 3 1 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATTA........................................................................................ 22 1 1 10.00 10 8 2 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATTTT....................................................................................... 23 0 1 9.00 9 9 0 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATA......................................................................................... 21 1 1 6.00 6 6 0 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATTAA....................................................................................... 23 2 1 5.00 5 4 0 0 0 0 1 0
........................................................TAGTATCAGCAAGGTGTAATTTAA...................................................................................... 24 2 1 5.00 5 4 0 1 0 0 0 0
..........................................................................................ATTACACGTTACTGGTACTACG...................................................... 22 1 1 4.00 4 0 0 4 0 0 0 0
..........................................................................................AGTACACGTTACTGGTACTAC....................................................... 21 0 1 4.00 4 0 1 3 0 0 0 0
............................................................................................TACACGTTACTGGTACTACG...................................................... 20 0 1 4.00 4 2 0 1 0 1 0 0
...........................................................................................GTACACGTTACTGGTACTACG...................................................... 21 0 1 3.00 3 0 3 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATTAAA...................................................................................... 24 3 2 3.00 6 6 0 0 0 0 0 0
........................................................TAGTATCAGCCAGGTGTAATT......................................................................................... 21 1 1 2.00 2 1 0 1 0 0 0 0
.........................................................AGTATCAGCAAGGTGTAATTT........................................................................................ 21 0 1 2.00 2 0 2 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAAA.......................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................AGTACACGTTACTAGTACTAC....................................................... 21 1 1 2.00 2 0 0 2 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATTTAAA..................................................................................... 25 3 1 2.00 2 1 0 1 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATTAT....................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0
..........................................................................................AGCACACGTTACTGGTACTACG...................................................... 22 1 1 2.00 2 0 0 2 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATTTTT...................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0
.......................................................TTAGTATCAGCAAGGTGTAATT......................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAGT.......................................................................................... 20 1 1 2.00 2 1 0 0 0 0 1 0
........................................................TAGTATCAGCAAGGTGTAATTTAT...................................................................................... 24 1 1 2.00 2 1 0 0 0 0 1 0
........................................................TAGCATCAGCAAGGTGTAATT......................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
........................................................TACTATCAGCAAGGTGTAATTT........................................................................................ 22 1 1 2.00 2 0 0 2 0 0 0 0
........................................................TAGAATCAGCAAGGTGTAAT.......................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
........................................................TAGTATCAGCAAGGAGTAATTTA....................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0
........................................................TAGTGTCAGCAAGGTGTAAT.......................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
........................................................TAGTATCACCAAGGTGTAATTT........................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAT........................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGCATCAGCAAGGTGTAATTT........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTACTTT........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
........................................................TGGTATCAGCAAGGTGTAATTT........................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................AGTACACGTTACTGGTACT......................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
........................................................TAGTATCATCAAGGTGTAATTT........................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0
........................................................TAGTATCTGCAAGGTGTAATTT........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGTATCAGCAGGGTGTAATTAA....................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGTATCAGCAAGGCGTAATT......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGTATCAGCACGGTGTAATT......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGTATCAGCCAGGTGTAATTT........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGTATCACCAAGGTGTAATT......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
........................................................TACTATCAGCAAGGTGTAAT.......................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................TTAGTATCAGCAAGGTGTAAT.......................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................TACACGTTACTGGTACTA........................................................ 18 0 1 1.00 1 0 0 0 0 1 0 0
........................................................TAGTATCAGCAGGGTGTAATTT........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATTG........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................TAGTACACGTTACTGGTACTACGT..................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0
........................................................TAGTCTCAGCAAGGTGTAAT.......................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................GCAAGTACACGTTACTGGTACTACG...................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................AGTACACGTTACTGGTACTA........................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTATG.......................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATCT........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................AGTATCAGCAAGGTGTAAT.......................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAATTTG....................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................AGTACACGCTACTGGTACTACG...................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................ATTACACGTTACTGGTACTAC....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
........................................................TAGTATCACCAAGGTGTAATTA........................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................AGCACACGTTACTGGTACTAC....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
........................................................TAGTATCAGCAAGGGGTAATT......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..........................GGAATCTTGGATCGGATTTT........................................................................................................................ 20 2 1 1.00 1 0 1 0 0 0 0 0
........................................................CAGTATCAGCAAGGTGTAATTT........................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................ACTACACGTTACTGGTACTACG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
........................................................TATTATCAGCAAGGTGTAATT......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGGAATTTA....................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
........................................................TAGTATCAGCAAGGTGTAGTTTT....................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................TAACAAGGTGTAATTTTTGT.................................................................................... 20 2 3 0.33 1 0 0 0 1 0 0 0
........................................................TAGTATCAGCAACGTGTAATTTAA...................................................................................... 24 3 4 0.25 1 1 0 0 0 0 0 0

Anti-sense strand reads

AGGACCATTCACCGAAGGCTACAGGTCCTGAGAACCTAGACTAAAAGGGTTCACGAATCATAGTCGTTCCACATTAAAAACAAACCAATTTCATGTGCAATGACCATGATGCATGAAGCTCTTTGGATTGATGCCTCCTATGTTTTTTTAGCGGACGTCAAAGTTC

***************************************.(((((..((((((.(((((((((.((.(((((..(((((......)))))))))).)).))))))))).)))))).)))))....***************************************** 		Read size # Mismatch Hit Count Total Norm Total V120

male body		 M056

embryo

 V046

embryo
...................................................................................AACAATTTCATGTGCAATGACCAT........................................................... 24 1 1 1.00 1 1 0 0
.....................CAGGTCCTGAGACCCTAGGTTA........................................................................................................................... 22 3 3 0.33 1 0 1 0
......................................................................................AATTTAATGTGCAACGACTATGAT........................................................ 24 3 4 0.25 1 1 0 0
...................................................................................................ATGACCAAGAGGTATGAAG................................................ 19 3 16 0.06 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droYak3 2R:12723633-12723798 + dya_120 confident TCCTGGTAAGTGGCTTCCGATGTCCAG-GACTCTT--------GGATCTG----ATTTTCCCAAGTGCTTAGTAT-CAGCAAG-GTG--TAAT-TTT--TG---------TTT-GGT-------------------TAAAGTACA-CGTTACTGGTACTACGTACTTCGAGAAACCTAACTACG-GAGGAT----ACAAAA-AAATCGCCTGCAGTTTCAAG
droEre2 scaffold_4845:10617652-10617806 - der_86 novel TCCTGGTAAGTAACTTA--ATGTCCAG-AA-------C---------CTG----ATTTTCCCAAGTGCATAGTAT-CAGCCAG-GTG--TAAT-TTT--TA---------TTT-GGG-------------------TAAAGTACA-CGTTACTGGTACTAGGTACTTTGAGAAACATGACTACG-GAGAGT----ACCAA-ACTA-GCACTGCAGCTTCAAG
droSec2 scaffold_1:14027502-14027666 - dse_45 confident TCCTGGTAAGGCAATTAAAATGTTGAG-GAATCTAGAC---------ATG----ATTTTCGGAAGTGCCTGGTAT-CAGATAG-GTG--TAAT-TTT--TG---------TGT-TTG-------------------TATAGTACA-CGTTTCTGGAACCAAGCCCTTTGAGAAACTTACCTGCG-GGGTAT----ATCAAAAATA-TCAGTGCAGTTTCAGT
droSim2 2r:17042655-17042816 - dsi-mir-992 Known_mirbase TCCTGGTAAGGCAATTAAAATGTTGAG-GAATCTAGAC---------ATG----ATTTTCGCAAGTGCCTGGTTT-CAGAGAG-GTG--TAAT-TTT--TG-------------TTG-------------------TATAGTACC-CTTTTTTGGAACCAAGCCCTTTGAGAAACTTACCTGCG-GGGTAT----ATCAAAAATA-TCACTGCAGTTTCAGG
dm3 chr2R:16472783-16472950 - dme-mir-992 Known_mirbase TCTTGGTAAGCCATTTAAAATGTTGAC-AAATCTAGAC---------ATG----ATTTTCCCAAGTGCCTGGTAT-CAGCAAA-GTG--TTATTTTTTATG---------TTT-ATG-------------------TAAAGTACA-CGTTTCTGGTACTAAGTACTTCGAGAAAGTTACCTGCG-TAGGAT----ATCAAAACTA-TCACTGCAGTTTCAGG
droEug1 scf7180000409474:1489069-1489174 + TCCTGGTAATTGTGTTATATT---AAG-TAATTCCAAAATGTTGGTAA-G----AATATTTCAAATACCTTAGGG-CCA------------------------------------------------------AGAACAGGTCCTATTTTT---------------------------------------------------TAA-GCACTGCCTACTCAAA
droBia1 scf7180000302291:2814836-2815006 + TCCT-ATAAGTAATTTGAAAAGTAAGGTGAAGTTT--------GGTTA-AAATACCATCCCCGAGTGCTTAGCAC-CAGACGT-GTG--TATT-TTAATTT---------TTT-GAG-------------------TAAAGTATA-CATTACTGGTGTTACGCATTTTGAGAAATATATCAACG-GGGGAC----AAAAAAATCA-GCACGGCAATCTCAGA
droTak1 scf7180000415401:101199-101358 - TCTT-GTAAGTAACTCAAGGAGTCCAG-GAATTTTTGG---------TAA----ATTTTCCTAAGTACCTAGAGC-CGATAAT-GTG--TGGT-T-----G---------CTT-GAG-------------------AGAAGTACA-AGTTACTGGTGCTGTGTGTTTTGAGAAGAATATCTACG-AGGAAT----ACAAA-AGGA-GCTCGGCAATTTCAGG
droEle1 scf7180000491201:737220-737402 - CCTT-GTAAGTTAACTGTGAATTCTAG-GAACTTTTTC---------AAA----AATTTCATAAATTTGTAGACT-TAGTAAATGTGTTTTTT---T--TT-----------T-TTTTATTACTCATTGGTTAAAAAAAAGTTCACCATTACTAGCTCTACATACTTAAAGAAATACATCTATG-AGGCAC----ACGAAAGAGA-GCACGGCAAAATCTGA
droRho1 scf7180000780104:83363-83531 - TAAA-TTGTG---------AACTCTAA-GAATTA---------AGTAA-AAATTAATTTCATAAGTGCGTAGATC-CAGTTAATGTGTTTATT---T--TTTTTTTACCGATTGGGT-------------------TAAAGTACA-CGTTACTGGTTTTACATATTTAAAGAAATATATCTACG-AGGGAT----ACGCAAGTGA-GCATGGCAGACTCTGA
droFic1 scf7180000454039:1777343-1777509 - CCTG-CAAAGGCAAT----AGCTCCAG-AAATTT---------AATTG-GT-TTTTTTTTTTAAGTATGTCGGGCCCAGATAC-GTG--TAAT-TTT--T-----TAATAATT-GAT-------------------TAAAGTACA-CGGTGCTGGGCCCTTATACTTAAAGAAATATTTTACTG-AGAAAC----GTAAAAACAA-GCACGGTAGACTCGGG
droKik1 scf7180000302471:942701-942842 - TAACAAG-----------------------------AA---------CTT----TTTTTTCCAAGTGTGTAGAACCCCGAATT-ATT--TAAT-TTGTGTA---------TTT-GTT-------------------CAAAATAAG-TCATTCGGGGTCTATATATTTTTAAAAACAATTCTATCGGTTGATAAGTGCCAA---AC-TCATCGCAGCTTTGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TCCTGGTAAGTGGCTTCCGATGTCCAG-GACTCTT--------GGATCTG----ATTTTCCCAAGTGCTTAGTAT-CAGCAAG-GTG--TAAT-TTT--TG---------TTT-GGT-------------------TAAAGTACA-CGTTACTGGTACTACGTACTTCGAGAAACCTAACTACG-GAGGAT----ACAAAA-AAATCGCCTGCAGTTTCAAGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TT..............................................................................................................................221346.00346131226212830000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-T...............................................................................................................................211195.0019531132001760000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-................................................................................................................................201171.001711300001670000
...........................................................................................................................................AGTACA-CGTTACTGGTACTACG............................................................22120.0020012800000000
.....................................................................TAGTAT-CAGCAAG-GTG--TAA..................................................................................................................................19116.0016000001150000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TTA--...........................................................................................................................23114.0014031000100000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TA..............................................................................................................................22110.001002000080000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TTT--...........................................................................................................................2319.00900000090000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-A...............................................................................................................................2116.00600000060000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TAA--...........................................................................................................................2315.00500000140000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TTA--A..........................................................................................................................2415.00500100040000
...........................................................................................................................................AGTACA-CGTTACTGGTACTAC.............................................................2114.00401300000000
.............................................................................................................................................TACA-CGTTACTGGTACTACG............................................................2014.00410100020000
............................................................................................................................................GTACA-CGTTACTGGTACTACG............................................................2113.00303000000000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TAA--A..........................................................................................................................2423.00600000060000
......................................................................AGTAT-CAGCAAG-GTG--TAAT-TT..............................................................................................................................2112.00202000000000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAA-................................................................................................................................2012.00200000020000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TTA--AA---------................................................................................................................2512.00200100010000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TTT--T..........................................................................................................................2412.00200000020000
....................................................................TTAGTAT-CAGCAAG-GTG--TAAT-T...............................................................................................................................2212.00200000020000
.....................................................................TAGTAT-CAGCAAG-GTG--TAT..................................................................................................................................1911.00100000010000
...........................................................................................................................................AGTACA-CGTTACTGGTACT...............................................................1911.00101000000000
....................................................................TTAGTAT-CAGCAAG-GTG--TAAT-................................................................................................................................2111.00100000010000
.............................................................................................................................................TACA-CGTTACTGGTACTA..............................................................1811.00110000000000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TG..............................................................................................................................2211.00100000010000
...........................................................................................................................................AGTACA-CGTTACTGGTACTA..............................................................2011.00101000000000
.....................................................................TAGTAT-CAGCAAG-GTG--TATG-................................................................................................................................2011.00100000010000
......................................................................AGTAT-CAGCAAG-GTG--TAAT-................................................................................................................................1911.00101000000000
.....................................................................TAGTAT-CAGCAAG-GTG--TAAT-TTG--...........................................................................................................................2311.00100000010000
droEre2
TCCTGGTAAGTAACTTA--ATGTCCAG-AA-------C---------CTG----ATTTTCCCAAGTGCATAGTAT-CAGCCAG-GTG--TAAT-TTT--TA---------TTT-GGG-------------------TAAAGTACA-CGTTACTGGTACTAGGTACTTTGAGAAACATGACTACG-GAGAGT----ACCAA-ACTA-GCACTGCAGCTTCAAGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................................................TAGTAT-CAGCCAG-GTG--TAAT-T...............................................................................................................................21120.002030001160
.....................................................................TAGTAT-CAGCCAG-GTG--TAAT-TT..............................................................................................................................22120.002062011010
...........................................................................................................................................AGTACA-CGTTACTGGTACTAGG............................................................22218.503737000000
.....................................................................TAGTAT-CAGCCAG-GTG--TAAT-................................................................................................................................20115.00151002930
...........................................................................................................................................AGTACA-CGTTACTGGTACTAGGT...........................................................23211.502300000023
...........................................................................................................................................AGTACA-CGTTACTGGTACTAG.............................................................2123.0066000000
.....................................................................TAGTAT-CAGCCAG-GTG--TAAT-TTA--...........................................................................................................................2312.0020000200
.....................................................................TAGTAT-CAGCCAG-GTG--TAAT-TTT--TA---------................................................................................................................2512.0020000110
.......................................................................GTAT-CAGCCAG-GTG--TAAT-TT..............................................................................................................................2011.0011000000
.................................................................TGCATAGTAT-CAGCCAG-GTG--T....................................................................................................................................2111.0010000100
.....................................................................TAGTAT-CAGCCAG-GTG--TAAT-TAA--A..........................................................................................................................2411.0011000000
.....................................................................TAGTAT-CAGCCAG-GTG--TA...................................................................................................................................1811.0010000100
....................................................................ATAGTAT-CAGCCAG-GTG--TAAT-TTA--A..........................................................................................................................2511.0011000000
............................................................................................................................................GTACA-CGTTACTGGTACTAGG............................................................2121.0022000000
......................................................................AGTAT-CAGCCAG-GTG--TAAT-TT..............................................................................................................................2111.0011000000
.....................................................................TAGTAT-CAGCCAG-GTG--TAAT-TA..............................................................................................................................2211.0010000100
.....................................................................TAGTAT-CAGCCAG-GTG--TAA..................................................................................................................................1911.0010000100
.....................................................................TAGTAT-CAGCCAG-GTG--TAAT-TAA--...........................................................................................................................2311.0010000010
................................................................................................................T-GGG-------------------TAAAGTACA-CGTTACTGGTAC................................................................2520.5010000100
.............................................................................................................................................TACA-CGTTACTGGTACTAGG............................................................2020.5011000000
.............................................................................................................................................TACA-CGTTACTGGTACTAGGTT..........................................................2220.5010000100
............................................................................................................................................GTACA-CGTTACTGGTACTAG.............................................................2020.5011000000
...............................................................................................................................................CA-CGTTACTGGTACTAGGTACT........................................................2220.5010000100
...............................................................................................................TT-GGG-------------------TAAAGTACA-CGTTACTGGTAC................................................................2620.5010000100
.............................................................................................................................................TACA-CGTTACTGGTACTAGGTA..........................................................2220.5010000010
...........................................................................................................................................AGTACA-CGTTACTGGTACTAGGC...........................................................2320.5010000001
...........................................................................................................................................AGTACA-CGTTACTGGTACTAGGA...........................................................2320.5011000000
...........................................................................................................................................AGTACA-CGTTACTGGTACT...............................................................1920.5010100000
droSec2
TCCTGGTAAGGCAATTAAAATGTTGAG-GAATCTAGAC---------ATG----ATTTTCGGAAGTGCCTGGTAT-CAGATAG-GTG--TAAT-TTT--TG---------TGT-TTG-------------------TATAGTACA-CGTTTCTGGAACCAAGCCCTTTGAGAAACTTACCTGCG-GGGTAT----ATCAAAAATA-TCAGTGCAGTTTCAGTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-TT..............................................................................................................................231598.0059824898621
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-T...............................................................................................................................221228.002282192259
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-................................................................................................................................211122.001220108122
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-TTT--...........................................................................................................................24146.004604510
...........................................................................................................................................AGTACA-CGTTTCTGGAACCAAGC...........................................................23143.0043314233
....................................................................CTGGTAT-CAGATAG-GTG--TAA..................................................................................................................................20132.003202903
.................................................................TGCCTGGTAT-CAGATAG-GTG--TA...................................................................................................................................22121.002109111
...........................................................................................................................................AGTACA-CGTTTCTGGAACCAAG............................................................22120.002001631
.....................................................................TGGTAT-CAGATAG-GTG--TAAT-TT..............................................................................................................................22114.001401400
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-TA..............................................................................................................................2318.0080800
.................................................................TGCCTGGTAT-CAGATAG-GTG--T....................................................................................................................................2118.0080404
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-TTT--TG---------TG..............................................................................................................2817.0070700
....................................................................CTGGTAT-CAGATAG-GTG--TA...................................................................................................................................1916.0060402
.....................................................................TGGTAT-CAGATAG-GTG--TAAT-T...............................................................................................................................2114.0040301
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-TTA--AA---------................................................................................................................2614.0040400
...........................................................................................................................................AGTACA-CGTTTCTGGAACCAAGA...........................................................2313.0030300
...........................................................................................................................................AGTACA-CGTTTCTGGAACCAA.............................................................2113.0030210
.....................................................................TGGTAT-CAGATAG-GTG--TAAT-TTT--...........................................................................................................................2312.0020101
............................................................................................................................................GTACA-CGTTTCTGGAACCAAGC...........................................................2212.0021010
.....................................................................TGGTAT-CAGATAG-GTG--TAAT-................................................................................................................................2012.0020200
............................................................................................................................................GTACA-CGTTTCTGGAACCAAG............................................................2112.0020200
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-AA..............................................................................................................................2311.0010100
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-TTC--...........................................................................................................................2411.0010100
....................................................................CTGGTAT-CAGATAG-GTG--T....................................................................................................................................1811.0010010
.................................................................TGCCTGGTAT-CAGATAG-GTG--TAC..................................................................................................................................2311.0010100
.................................................................TGCCTGGTAT-CAGATAG-GT........................................................................................................................................1911.0010001
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-TTA--A..........................................................................................................................2511.0010100
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-TTA--...........................................................................................................................2411.0010100
...........................................................................................................................................AGTACA-CGTTTCTGGAACCA..............................................................2011.0010100
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-TAA--A..........................................................................................................................2511.0010100
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-C...............................................................................................................................2211.0010100
....................................................................CTGGTAT-CAGATAG-GTG--TAT..................................................................................................................................2011.0010100
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-A...............................................................................................................................2211.0010100
....................................................................CTGGTAT-CAGATAG-GTG--TAAT-TTT--T..........................................................................................................................2511.0010100
.....................................................................TGGTAT-CAGATAG-GTG--TAA..................................................................................................................................1911.0010100
....................................................................CTGGTAT-CAGATAG-GTA--AT...................................................................................................................................19110.0910010
droSim2
TCCTGGTAAGGCAATTAAAATGTTGAG-GAATCTAGAC---------ATG----ATTTTCGCAAGTGCCTGGTTT-CAGAGAG-GTG--TAAT-TTT--TG-------------TTG-------------------TATAGTACC-CTTTTTTGGAACCAAGCCCTTTGAGAAACTTACCTGCG-GGGTAT----ATCAAAAATA-TCACTGCAGTTTCAGGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCCT........................................................2211316.00131692404819971700000301000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCC.........................................................2111095.001095334120100320000001121000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCC..........................................................201208.002081911187200000007000
...............................................................................................................................................CC-CTTTTTTGGAACCAAG............................................................181158.001580000156200000000000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGC...........................................................19197.0097000094300000000000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCCTT.......................................................23192.0092060082300000001000
.................................................................TGCCTGGTTT-CAGAGAG-GTG--TA...................................................................................................................................22143.0043000010100020039000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCCC........................................................22126.0026120500000000000000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCCA........................................................22125.0025000000000000124000
.................................................................TGCCTGGTTT-CAGAGAG-GTG--T....................................................................................................................................21116.0016000030000010012000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCCG........................................................2219.00907200000000000000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCT.........................................................2115.00505000000000000000
..................................................................GCCTGGTTT-CAGAGAG-GTG--TA...................................................................................................................................2115.00500001000002200000
..................................................................GCCTGGTTT-CAGAGAG-GTG--TAA..................................................................................................................................2214.00400001000002001000
.................................................................TGCCTGGTTT-CAGAGAG-GTG--TT...................................................................................................................................2214.00400000000000004000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCCTTT......................................................2414.00400004000000000000
.................................................................TGCCTGGTTT-CAGAGAG-GTG--.....................................................................................................................................2014.00400001000000003000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCAA.........................................................2113.00300000000000003000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCCAA.......................................................2313.00300000000000003000
.................................................................TGCCTGGTTT-CAGAGAG-G.........................................................................................................................................1812.00200002000000000000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCA..........................................................2012.00200000000000002000
................................................................................................T--TG-------------TTG-------------------TATAGTACC-CTTTTTTGGA..................................................................2512.00200000000200000000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCG.........................................................2112.00202000000000000000
..................................................................GCCTGGTTT-CAGAGAG-GTG--T....................................................................................................................................2012.00200000000001100000
...............................TCTAGAC---------ATG----ATTTTCGC................................................................................................................................................................1812.00200200000000000000
.................................................................TGCCTGGTTT-CAGAGAG-GT........................................................................................................................................1912.00200002000000000000
.................................................................TGCCTGGTTT-CAGAGAG-GTG--TAA..................................................................................................................................2312.00200000000000002000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGCCCAAA......................................................2411.00100000000000001000
...........................................................................................AT-TTT--TG-------------TTG-------------------TATAGTAC..............................................................................1811.00100001000000000000
..................................................................................................................................................CTTTTTTGGAACCAAGCCCT........................................................2011.00100000100000000000
.................................................................TGCCTGGTTT-CAGAGAG-GTG--TAAA-................................................................................................................................2411.00100000000000001000
..................................................................................................................................................CTTTTTTGGAACCAAGCCC.........................................................1911.00100000000000001000
..................................................................GCCTGGTTT-CAGAGAG-GTG--TAAT-AAA--...........................................................................................................................2611.00100000000000001000
................................................................................................................................................C-CTTTTTTGGAACCAAGCCCT........................................................2111.00100001000000000000
..................................................................GCCTGGTTT-CAGAGAG-GT........................................................................................................................................1811.00100000000001000000
.............................................................................................................................................TACC-CTTTTTTGGAACCAA.............................................................1911.00100001000000000000
.............................................................................................................................................TACC-CTTTTTTGGAACCA..............................................................1811.00100001000000000000
.....................................................................................................................................................................TTTGAGAAACTTACCTGCG-GGGTAT----AT.........................2711.00100000000001000000
.................................................................TGCCTGGTTT-CAGAGAG-GTG--TAAA-A...............................................................................................................................2511.00100000000000001000
...................................GAC---------ATG----ATTTTCGCAAGT............................................................................................................................................................1811.00110000000000000000
..............................................................................................................................................ACC-CTTTTTTGGAACCAAGCCCAA.......................................................2411.00100000000000001000
..................................................................GCCTGGTTT-CAGAGAG-GTG--.....................................................................................................................................1911.00100001000000000000
.......................................................................................................................................................TTGGAACCAAGCCCTTTGAGA..................................................2111.00100000010000000000
.................................................................TGCCTGGTTT-CAGAGAG-..........................................................................................................................................1711.00100000000001000000
...............................................................................................................................................CC-CTTTTTTGGAACCAAGTAA.........................................................2170.14100000000000001000
dm3
TCTTGGTAAGCCATTTAAAATGTTGAC-AAATCTAGAC---------ATG----ATTTTCCCAAGTGCCTGGTAT-CAGCAAA-GTG--TTATTTTTTATG---------TTT-ATG-------------------TAAAGTACA-CGTTTCTGGTACTAAGTACTTCGAGAAAGTTACCTGCG-TAGGAT----ATCAAAACTA-TCACTGCAGTTTCAGGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTT..............................................................................................................................2316581.006581000000000001000000000001190000000000011010301000410070100000000000000000000000000002000100002002200200000100100102000040000000000000000000000002000013130102044000000000000000000000000000100001230394100057038700000000000100000166111105000000010000110002202900921001230000010010113602210126021152260017110100030124164212415963134649900525146111362320321095192036343482411131010
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTT...............................................................................................................................2212619.00261900000000000100000000000192000000000000001010200000000000000000000000000000000000000100000000000110060000000000000130000000000000000000000000000000000001011202000000000001000000010000000000004412350000710225000000000000001000222000400020000000000010010040030200300000000400239130002404013390155000100853111045153322394900224064821010632441091200100101100
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAAG............................................................2211857.00185700002211002682000000000070000000000000000000000000000000000000000000000000000542305982581324152341268521136103266261600266714045990022000000000000000000000000101000000000000000000000001000000503000000000020000000101000000000000000000112024350014000000000000000000000010000000000000090000010000000010000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTTT............................................................................................................................2511200.001200000000000000000000000000000000000000200100000000101000000000000000000000000000000000000000000500000000000000003000000000000000000000000000000280101212151000000000000000000000000000000000441831000405700000000000000000074302140100000000001000001010000010010000000020059110011100051201412000004312831058037511590007406214850419434016031110100200
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAA.............................................................211863.0086300000300001430000000000070000000000000000000000000000000000000000000000000000011201432600081230137831972110141415101607531323023600000000000000000000000000000000000000000000000000200000020100000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTA..............................................................201544.005440000000000111100000000008000000000000000000000000000000000000000000000000000001010300020031801248238600111331800945110616021900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATT................................................................................................................................211535.0053500000000000000000000000430000000000000000000000000000000000000000000000000000000000000000000002011000001000000050000000000000000000000000000000000001000000000000000000000000000000000000007047000070300000000000000000000000000000000000000000000000400102000000000002006510000314010300160000002040000402536700100010181021970001060000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTT.............................................................................................................................241512.00512000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000120330300103200000000000000100000100000100000000000000000001000010000000000000027100000010001001310000032102023002152600012000340029141001030120100000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAAA............................................................221244.0024400000000000110000000000000000000000000000000000000000000000000000000000000000000004000000324007500620015410003000047100900000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTAT.................................................................................................................................201166.0016600000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014000020120000000000000000000010000000000000000000000000000000001000000001003800000300000000100000001201000000022000010001006310000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTA.............................................................................................................................241116.001160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001301400001016000000000000000000000000000000000000000000000000000000000000000000200000000010300000000021100001029025001300001003401001010000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTA..............................................................................................................................23193.0093000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000001402000001024000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000500000002034000010001001400000020000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAAGA...........................................................23170.007000000000000200000000000000000000000000000000000000000000000000000000000000000000000000001040024009002011000000019000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACT...............................................................19162.00620000000000000000000000000000000000000000000000000000000000000000000000000000110000000000001009001000000200300207001000000000100000000000000000000000000000000000000000200100101001000000007000000020000000000000000000000000140001000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GTACA-CGTTTCTGGTACTAAG............................................................21157.00570000000000010000000000000000000000000000000000000000000000000000000000000000000000901000102002000700000000000008000600000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTAA............................................................................................................................25139.003900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010050000000000000000000000000000000000000000000000000000000000000000000000030100000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000002201000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTTTA...........................................................................................................................26131.0031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000108000000700000000000000000000000000000000000000000000000000000000000000000010000000000000020000001000000000002000000000100420000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAAAA...........................................................23129.00290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001200400100000101005000300000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTAA.............................................................................................................................24128.00280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000800000000000000000000000000000000000000000000000000000000000000000000000010000000000000000020000000101100000000000000000010000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTA..................................................................................................................................19125.0025000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000200000000000000000012000000000000000000000000000000000000000000000020000000000000000000000000000000010000000000200700000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTA...............................................................................................................................22121.0021000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000020600000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000010000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAAC............................................................22119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000100000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTAC................................................................18114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100500500100100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAAT............................................................22113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000500200000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAAGT...........................................................23112.0012000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000100400200000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTAAA............................................................................................................................25110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAG.............................................................21110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100006100000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GTACA-CGTTTCTGGTACTAA.............................................................20110.0010000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000001300000200000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTTA............................................................................................................................2519.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000500000000000000000
............................................................................................................................................GTACA-CGTTTCTGGTACTAAGT...........................................................2218.008000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................CTGGTAT-CAGCAAA-GTG--TTATTTT..............................................................................................................................2418.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000600000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTTTT...........................................................................................................................2616.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000010000000000000000010000000000200010000000000000000
......................................................................GGTAT-CAGCAAA-GTG--TTATTTT..............................................................................................................................2216.006000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000
........................................................................TAT-CAGCAAA-GTG--TTATTTT..............................................................................................................................2016.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAC.............................................................2115.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTAA..............................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTAAA.............................................................................................................................2414.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000
............................................................................................................................................GTACA-CGTTTCTGGTACT...............................................................1814.004000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AAGTACA-CGTTTCTGGTACTAAG............................................................2314.004000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CTGGTAT-CAGCAAA-GTG--TTATTT...............................................................................................................................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TT...................................................................................................................................1814.004000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTAG............................................................................................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAAGC...........................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTTTAA..........................................................................................................................2713.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTC..............................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTT..............................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTG..............................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAT-CAGCAAA-GTG--TTATTT...............................................................................................................................1913.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AAGTACA-CGTTTCTGGTACTAA.............................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTAAGTA..........................................................2413.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTG..............................................................2012.002000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GTACA-CGTTTCTGGTACTAAA............................................................2112.002000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTTTATG---------................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CCCAAGTGCCTGGTAT-CAGCAA............................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AAGTACA-CGTTTCTGGTACTAAA............................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AGTACA-CGTTTCTGGTACTC..............................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTC...............................................................................................................................2212.002000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................CTGGTAT-CAGCAAA-GTG--TTATT................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000
........................................................................TAT-CAGCAAA-GTG--TTATTTTTT............................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTATTTTC.............................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGGTAT-CAGCAAA-GTG--TTT..................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000
.........................................................................AT-CAGCAAA-GTG--TTATTT...............................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GTACA-CGTTTCTGGTACTA..............................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CA-CGTTTCTGGTACTAAG............................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TCCTGGTAATTGTGTTATATT---AAG-TAATTCCAAAATGTTGGTAA-G----AATATTTCAAATACCTTAGGG-CCA------------------------------------------------------AGAACAGGTCCTATTTTT---------------------------------------------------TAA-GCACTGCCTACTCAAASizeHit CountTotal NormTotal
No Reads
droBia1
TCCT-ATAAGTAATTTGAAAAGTAAGGTGAAGTTT--------GGTTA-AAATACCATCCCCGAGTGCTTAGCAC-CAGACGT-GTG--TATT-TTAATTT---------TTT-GAG-------------------TAAAGTATA-CATTACTGGTGTTACGCATTTTGAGAAATATATCAACG-GGGGAC----AAAAAAATCA-GCACGGCAATCTCAGASizeHit CountTotal NormTotal
No Reads
droTak1
TCTT-GTAAGTAACTCAAGGAGTCCAG-GAATTTTTGG---------TAA----ATTTTCCTAAGTACCTAGAGC-CGATAAT-GTG--TGGT-T-----G---------CTT-GAG-------------------AGAAGTACA-AGTTACTGGTGCTGTGTGTTTTGAGAAGAATATCTACG-AGGAAT----ACAAA-AGGA-GCTCGGCAATTTCAGGSizeHit CountTotal NormTotal
No Reads
droEle1
CCTT-GTAAGTTAACTGTGAATTCTAG-GAACTTTTTC---------AAA----AATTTCATAAATTTGTAGACT-TAGTAAATGTGTTTTTT---T--TT-----------T-TTTTATTACTCATTGGTTAAAAAAAAGTTCACCATTACTAGCTCTACATACTTAAAGAAATACATCTATG-AGGCAC----ACGAAAGAGA-GCACGGCAAAATCTGASizeHit CountTotal NormTotal
No Reads
droRho1
TAAA-TTGTG---------AACTCTAA-GAATTA---------AGTAA-AAATTAATTTCATAAGTGCGTAGATC-CAGTTAATGTGTTTATT---T--TTTTTTTACCGATTGGGT-------------------TAAAGTACA-CGTTACTGGTTTTACATATTTAAAGAAATATATCTACG-AGGGAT----ACGCAAGTGA-GCATGGCAGACTCTGASizeHit CountTotal NormTotal
No Reads
droFic1
CCTG-CAAAGGCAAT----AGCTCCAG-AAATTT---------AATTG-GT-TTTTTTTTTTAAGTATGTCGGGCCCAGATAC-GTG--TAAT-TTT--T-----TAATAATT-GAT-------------------TAAAGTACA-CGGTGCTGGGCCCTTATACTTAAAGAAATATTTTACTG-AGAAAC----GTAAAAACAA-GCACGGTAGACTCGGGSizeHit CountTotal NormTotal
No Reads
droKik1
TAACAAG-----------------------------AA---------CTT----TTTTTTCCAAGTGTGTAGAACCCCGAATT-ATT--TAAT-TTGTGTA---------TTT-GTT-------------------CAAAATAAG-TCATTCGGGGTCTATATATTTTTAAAAACAATTCTATCGGTTGATAAGTGCCAA---AC-TCATCGCAGCTTTGTGSizeHit CountTotal NormTotal
No Reads

Generated: 10/20/2015 at 10:14 PM