ID:

dya_1193

 Coordinate:

4:83013-83163 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.0 -13.5 -13.3 -13.3

Flybase annnotation

exon [dyak_GLEANR_14652:8]; CDS [Dyak\GE14535-cds]; intron [Dyak\GE14535-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-
mature
  1. 2L:15536475-15536495 -
  2. 2L:19791368-19791388 +
  3. 2L:20586355-20586375 +
  4. 2L:20693085-20693105 -
  5. 2R:815855-815875 -
  6. 2R:988207-988227 +
  7. 2R:3045383-3045403 +
  8. 2R:3784141-3784161 -
  9. X:12188701-12188721 +
  10. 3R:6439635-6439655 +
  11. dya_1193  4:83015-83035 +
  12. 4:475548-475568 +
  13. 4:686244-686264 -
  14. v2_chrUn_975:17005-17025 +
  15. v2_chrUn_1520:618-638 +
  16. v2_chrUn_6550:7453-7473 -
  17. v2_chr3L_random_042:7404-7424 -
  18. v2_chr3L_random_173:749-769 -
  19. v2_chrUn_004:227908-227928 +
  20. v2_chrUn_363:3111-3131 +
star
  1. 2L:104507-104530 +
  2. 2L:20922438-20922461 +
  3. 2R:1046954-1046977 +
  4. 2R:1108382-1108405 +
  5. 3R:5680133-5680156 +
  6. dya_1193  4:83058-83081 +
  7. 4:894221-894244 +
  8. v2_chrUn_4617:429-452 +
  9. v2_chrUn_2444:911-934 +
  10. v2_chrUn_3370:1000-1023 +
  11. v2_chrUn_5467:613-636 +
  12. v2_chrUn_5469:481-504 +
  13. v2_chrUn_6578:3692-3715 +
  14. v2_chrUn_6631:138015-138038 +
  15. v2_chr2h_random_004:1112420-1112443 +
  16. v2_chr2L_random_001:52085-52108 +
  17. v2_chr2L_random_001:65062-65085 +
  18. v2_chr2L_random_001:174925-174948 +
  19. v2_chrUn_003:438875-438898 +
  20. v2_chrUn_281:511-534 +
  21. 2L:19403105-19403128 +
  22. 2L:21385008-21385031 +
  23. 2R:8630858-8630881 +
  24. X:20005035-20005058 +
  25. 3R:1054964-1054987 +
  26. 3R:1645089-1645112 +
  27. 3R:13075083-13075106 +
  28. 4:714685-714708 +
  29. v2_chrUn_4318:1473-1496 +
  30. v2_chrUn_6258:3879-3902 +
  31. v2_chrUn_6452:5925-5948 +
  32. v2_chrUn_6813:1142-1165 +
  33. v2_chr2h_random_004:768232-768255 +
  34. v2_chr2L_random_010:146747-146770 +
  35. v2_chr3L_random_041:2237-2260 +
  36. v2_chr3R_random_033:505-528 +
  37. v2_chr3R_random_170:365067-365090 +
  38. v2_chr3R_random_170:367759-367782 +
  39. v2_chrUn_004:275131-275154 +
  40. v2_chrUn_470:73730-73753 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCGGCTATTAATCCTGGTCAAGAATATATATACTTTATAGGGTCGGAAATGCTTCCTTCTGCCTGTTACATTATTCAAGGAATCTAGTATACCCTTTTACTCTACGAGTAACGGGTATAATGAATTAAAAAGGCATTGTTTAGTTTTATAAAACACATGGGAATAATGAGTTGTAATCATCATTTTATTTTATTTTGTAGGAACCTGGAAACAAAAAACCCATCAAATACGCAATCAAATGACTCCAAGG
****************************************************...................................((..((((..((((((...)))))).))))))************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M026
head
 V120
male body		 M043
female body
 V058
head
..............................................................................................................................................................................................TTATTTTGTAGGAACCTGG.......................................... 19 0 1 1.00 1 0 1 0 0
.......................................................................................................................................................................................................AGGAACCTGCAAACAAAAAACC.............................. 22 1 1 1.00 1 1 0 0 0
.....................................ATGGGGTCGGAGATGCTTCC.................................................................................................................................................................................................. 20 2 6 0.17 1 1 0 0 0
.....................................................TTCCTTCTGCCTGTTATTTTA................................................................................................................................................................................. 21 2 19 0.05 1 0 0 1 0
....................................................CTTCCTTCTGCCTGTTACATT.................................................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0
....................................................................................................................................GGGATTGTTTAGTTATAT..................................................................................................... 18 2 20 0.05 1 0 0 0 1
...........................................TCGGAAATGCTTCCTTCTGCCTGTT....................................................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0
...............................................................................................TTTTACTCTACGAGTAACGGGTAT.................................................................................................................................... 24 0 20 0.05 1 0 0 1 0

Anti-sense strand reads

GAGCCGATAATTAGGACCAGTTCTTATATATATGAAATATCCCAGCCTTTACGAAGGAAGACGGACAATGTAATAAGTTCCTTAGATCATATGGGAAAATGAGATGCTCATTGCCCATATTACTTAATTTTTCCGTAACAAATCAAAATATTTTGTGTACCCTTATTACTCAACATTAGTAGTAAAATAAAATAAAACATCCTTGGACCTTTGTTTTTTGGGTAGTTTATGCGTTAGTTTACTGAGGTTCC
************************************************************************************************************************************...................................((..((((..((((((...)))))).))))))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M026
head
 V046
embryo
........................................CCCAGCCTATACGAAGTAAGACAGACA........................................................................................................................................................................................ 27 3 2 0.50 1 1 0
................................................CTACGAAGGAAGACGGACAAT...................................................................................................................................................................................... 21 1 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 4:82963-83213 + dya_1193 CTCGGCTATTAATCCTGGTCAAGAATATATATACTTTATAGGGTCGGAAATGC----TTCCTTCTGCCTGTTACAT--T-------ATTCAAGGAATCTAGTATACCCTTTTA-C--TC------TACGAGTAACGGGTATAATGAATTA-------AAAAGGCATTG----------TT-----------------------------------------------------TAGTTTT------------ATAAAACA---CA-TGGGAAT-----AATG------------------------------------------------------------------------------------AGTTGTAATCA-----------------------------------------------------------------------TCATTTTATTTTATTTTGTAG--------------GAACC-------------------------------------------TGGAAA--------------------------------------------------------------------------------------------------------------------------------CAAAAA--ACCCATCAA----------------------------------------------ATACGCA--ATCAAATG-----------ACTCCAAGG
droEre2 scaffold_4690:18583026-18583243 - CTCGGCTATTGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACGT----TTCCTTCTGCCTGTTACATACT-------TTTCAACGAATCTAGTATACCCTTTTA-C--TC------TACGAGTAACGGGTATAACAACTC--------TGAT--------------TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAT--------------TATTA-------------------------------------------TA----------------------------------------------------------------TAAGATATAGGAAAATGTATTTTTTTAAAACCCTGAC----------TGCAA---------------------------------T--------------------------------------T-TGAAAATATTTAGAAAC--A-AGTA-----------ATTAAT
droSec2 scaffold_28:651056-651316 + CTCGGCTATTGATCCTGATCAAGAATATATATACTTTATAAAGTCGGAAATTATAAAGTCCTTCTGCCTGTTACATACT-------TTTCAATGAATCTAGTATACCCTTTTA-C--TC------AACGAGTAACAGGAATAACAACAAATAGAG--G---------------------------------------------------CCGCTGTGTGCTATGAAGTAGTTAGAG----ATCTTGAACAG----------------------------------------TGTAATGAA-------------ATGGCACTTGTATT-T-------------------------------------------------------------------------------------------------------------T---------CCATTTTAATGTC-------G--------------TTGCC------------------TG-G----------------AAGTATGCAACCACC---------------------------------------------------------------------------------------------------------------------------------------TGGAGG----------------------------------------------ATACAA-------------AA---------TTAAACG
droSim2 x:20544476-20544761 - ATCGGCTATTGATCCTGATCAGGAATATATATAGTTTATATGATCGGAAACGC----TTCCTTCTGCCTGTTACATACT-------TTTCAACGAACCTAGTATACCTTTTCA-C--AC------TACAATTAACTGGTATAATAATAA--------TAT----------------------------------TAAAACTTAAAAAAACGGTTGTGTTTTAAT---------------------------TATC---AGTTCTTA-----------------------------------------------------------------------------------------------------------------ATT--------------------GAATTATGGCC----------------------------------------------TACATTTTA-----------------------------------------GA------------------------------------------------------------------------------------------------------------------ATTTTCTATTCAAT-----TGCAC---------------------------------ATTGAAGATATTTGTTGGCTGTGAATTTAAGCAAAATATC-AATCTATATGAA--ATTAAG-T-----------ATCCCAAAG
dm3 chrX:22246179-22246428 + CTCGCCTATTGATTCTGATCAAGAATATATATACGTTATGTAGTCGGAAACGC----TACCTTCTGCCTGTTACATACT-------TTTCAACGAACCTAGCATAGCCTTTTA-C--TC------TTCAAATAACTGGTATAAATACCA--------C-----------------TTGA-------------------------------------------------------------------------------------------------------------------------------------------------TTA-T-------A---GCATTTGAATGGCAA------------------TAAAGGTATTACTAGAAATCAATTAAAAA---ATGTAGAT----------------------------------------------CG------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------CAGTCAAAACCTAAAACAAAAT--ACCCACTAAC--------------------------------------T-A------TTGCT--GTCAAACC------------ATCTTAAG
droEug1 scf7180000405610:583-814 - CTTCGCTATTGATCCTGATCAAGAATATATATACTTTATAGGGTCGCAAAAGC----TTCCTTCTATCTGTTACATACT-------TTTCAACGAATCTAGTATACCCTTTTA-C--TC------TACGAGTAACGGGTATAATTATAA--------AAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-TGAAGGTAA-----------------------------------------------------------------------------------------------------------------------TAAAAATGTGAAATTTGTAAAATGTTTATTTCACGCAAAAGACATTGAAAACGAAGAAGATGT----------------------------GTAT------------------------------------------------------------------------------------------------------AAAG----------------------------------------------------------A-------------AATTGAACGATTCCA---
droBia1 scf7180000301722:31651-31874 + CTCGGCTAGTGATCCCGA-------TATATATACTTTATGGGGTCGGAAACGC----TTCCTTATACCTGTTACATACT-------TTCCGACGAATCTAGTATACCT-TTTA-C--TC------TACCAGTAACGGGTATAATTATTT--------C------ATTATTTCTC-------------------------------------------------T---------------------------TACC---GATTCTT-TGACAGC-----TATG------------------------------------------------------------------------------------TGTT-------------------------------------------AGAGTCG----------------------------TC--------CGATTTTGTAT--------------TAATT-------------------------------------------TGAAT-------------------------------------------------------------------------------------------------------ACCGA------------------------------------------------------------------------------A--ATCTTACAAATAATAAAAAA-----------CTTCCAATA
droTak1 scf7180000415876:577591-577827 + CTCGGCTGGTGATCCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGC----TTCCTTCTAGCTGTTACACACT-------TTTGCACGAATCTAATATACCCTTTTA-C--TC------TACGAGTAACGGGTATAAAAATAT--------AAGA---ACTA----------TT-----------------------------------------------------TGACTTT------------G-----------------------------------------------------------------------------------------------------------------TGAA-------------------------------------------AAAGTGGTTTAAACTAAAATT----T---------TGATTTTAGTTTA-------G--------------TTGAA------------------TA-G----------------GAATATGAAGT----------------------------TTAT------------------------------------------------------------------------------------------------------AAAAATATTA--------------------------------------------------------ATTACAAA-----------TCTGATAAC
droEle1 scf7180000490751:260923-261153 + CTCTACTAGTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGT----CTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTCT---------------GC-----AAGGGTATCAAAATAT--------AAAA----TA------AGTTGTATA-------------------------------------------------------------------------------------------------------------------------------------------T-----------------------TTAATGGAAATAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACCACATTTATTTGATTTTT----ACAGCTTTG------TTTCTTGGATAGT----------------------------------TATC----ACTGA------------------------------------------------------------------------------A--AACCCGTTAAGAAGAAAATG-----------ACTCCTTGG
droRho1 scf7180000780271:54268-54507 - CTCGGCTAGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGC----TTCCTTCTAGCTGTTACATACT-------TTTGCACGAATACAATATACCCTTTTA-C--TC------TACGAGTAAC-GGTATAAAAACGA--------GAAA---G--------------------------------------------------------------GAAGATAAGTTCG------------ACAAGACG-----AAGTGTAC-----ATGC------A------------------------CTTGCAGCTATATTACAAATTATTAAAATTTT-T-----------------------------------------------------------------------------------------TG-----------------------------------------------ACC-------------------------------------------TGCAAACAGCAAAAATTACACATATCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTC
droFic1 scf7180000453829:516327-516552 - TTCAGATGGTGATGCTGATCAAGAATATATATACTTTATGGGGTCTGAGGTGT----CTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTTTTG-C--TC------TGCA-----AGGGTATAAAAATAG--------AGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-TT--AACAAGAGATCTAATTATTTGTAAACAAGATTTCTTAAAGCTTTTAGGAAAT---------------------------------------------------------------------------------------------------------------------------------CAAAGG----------------------------------------------------------------------------------------------------------------------------------ATACACCCATA--------------------------------------------------TTTCCCA--ATCAAACG-----------TATGCAAAG
droKik1 scf7180000302592:2075142-2075405 - CTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGT----CTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTGC----------------------AAGGGTATAAAAATAG--------G-----------------TCGTAT----------------------------------TATA-AATATAATAATTATAA----AAT---------------------TAAATAAATAAAATGCAGCTTTTCAGATATTTTA--TTATTATGTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTCAATATATATTTCTAATGA------------------------------------------------------------------------------------------------------------------------------------------AAAAT--ACCTGTTAAT--------------------------------------T-AAAAAATATTTA--ACCAAATG-T---------ACTCCAAAA
droAna3 scaffold_13339:1917478-1917712 - CTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGT----CTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATTATAATACCCTTCTG-C------------------AAGGGTATAAAAATAA--------AAAA----CA------ATTAGTACA-------------------------------------------------------------------------------------------------------------------------------------------TA-------------------------------------------------------------------------------------AAGATAG-----ATTGA----AACTTTTTA-----------------------------------------------TTT-------------------------------------------CATAATCAATA---------------------------ACAGTTTTATAAATATATCTCGTATGGC----------------------------------CATACATA-----A-----------------------------------------------------------------------------A--AACATAAAAA--AAA-----AAAG-------AAAAATGAC
droBip1 scf7180000391623:5224-5475 + CTCAGGACGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGT----CTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATTATAATACCCTCT---------------GC-----AAGGGTATAAATATATATATAGGCAAAAAACATGT-----ATTAGTTCA-------------------------------------------------------------------------------------------------------------------------------------------TA---G-T-------A---ATATAATAATAACAA--------TAATTATTATTAATATATC--------------------AAATTGTATCT----------------------------------------------CATTTTATA-----------------------------------------GAAAATACC-------------TTC-------------------------------------------------------------------------------------------------AACTTCAA-----AATCC---------------------------------ATTACAAATAAT--------------------------------------------------T-----------TTAATTTGA
dp5 4_group3:42793-43032 + CTCGGCTATTGATGCTGATCAGGAATATATATACTTCATGGGGTCGAGAACGC----TTCCTTCTGTACGTTACACACATCCATTTTCACCACAAATCTAATATACCCCTATA-C--TCAT----TTTGAGTATCGGGTATAAAAATTG--------TAAT---G----------------------------------------------------------------CTTAT--------------------------------------------------------------------------------------------------------------------AAAAATTAGACAATTGATTTGTTTACCGGATT--------------------AAATTATGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT------------------------------TTGAAAATCGCGATGGAAA-----ACCTC---------------------------------TTTAAA-------------------------------------------------AAC----AGCAG--------TTAACTGA
droPer2 scaffold_11:2760265-2760530 + CTCGGCTATTGATGCTGATCAAGAATATATGTACTTTATGGGGTCGAAAACGC----TTCCTTCTCGATATTACACACATCCACTTTTATCACAAATCTAATATACCCTTACA-C--TCAT----TTTGAGTACCGGGTATAAAAATGA--------TAAC---ACA--------------------------------------------------------------ATTTCCGTTGA------------ATCCAACGCTCTTAACTGACT-----GAGG------A------------------------GTTGCAAGTCT------------------------------------------------------------------------------------------------------------------------------------------TTTGTACTTTAATGAACCCATGAACTT--TAAAATGAATAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTAA----------------------------------------A--AACGCATTTA--AAC----AACAA---------TTTACGG
droWil2 scf2_1100000004909:876314-876561 - CTCGGTTGTTGATCCTGATCAAGAATATATATACTTTGTGGGGTCGGAGATGC----TTCCTTCTGCCTGTTACATACA-------TTTTGGCGACTTTAATATACCATTTCA-C--CC------TATGGGTGTATGGTATAAAAAGGA--------T-----------------TTGTACA-------------------------------------------------------------------------------------------------------------------------------------------TATATCTTAAACCATCA------------AAAAAGTCGACAAATTGTGTTTATAAGGGTTTTATTAGATTATATGTGAAAA---------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------AAAACCAAACT-----------C----------------------------------------------AAAATATGTTCT--GCGATATG-----------AATCTGAAG
droVir3 scaffold_13047:4793994-4794257 + CTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAATGC----TTCCTTCTGCCTGTTACATACATA----TTTTGCACAAATAAAATATACCCTTATA-C--CCATTTTTAATGGGTTCAGGGTATAATAAGCA--------CA--------------------------------------------------------------------GAATATAA--------------------------------------------------------------------------------------------------------------TTACTGGTAA-------------------TA---------------------------AATCATG----------TATGA----AACTTTATCTTTGTGCATATTATA-------------T----------------------------------------------------ATTATATGA----AGAA---------------------------------ACAGTTTT------------------------------------------------------------------------CAATAAAAAAAAAAAA-----------A----------------------------------------------AGAAAATATTAT--AAAATATG-----------ATATAAAGG
droMoj3 scaffold_6680:15473890-15474136 + CTAAGCTCGTTGTCCTGATCAAGAATATATATACTTTATGGGGTCTGCGATAA----TTCCTTCTGCCTGTTACATACT-------TTTCA-CAAAACCATTATACCCTGATTTC--CCATTTTCAATGGGTTCAGGGTATAAAAAATA--------ATAATATTTTT-----TTTAAATAATAATAATAATATAAAGAGATAATAAA-----------------------------------------------------------------------AGG------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATTTGTATATTGTGTTTTTTAAAAAATAATA-AAAAAATATATA--TATAAT-A-----------ATAATAATA
droGri2 scaffold_14824:4694-4916 + CTCGGCTATTGACCCTGATCAATAATATATATACTTTATGGGGACGGAGATGC----TTCTTTCTGCCTGTTACATACA-------TTTGCATAAAACCATTATACCCTTTAA-TGATC-------------AAC-TGTGTAT-----------------------------------------------------------------------------TG-GAAGTAATTAGAGTCAAA--TCTAACAA----------------------------------------TTTTTTA--ATATTATACTAAT--------------------------------------------------------------------------------------------TACTAC-------CG----------GCTCATTTTTCGTGCTAATTATTTTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTAAAAAAC----C--AA---------ATAAATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CTCGGCTATTAATCCTGGTCAAGAATATATATACTTTATAGGGTCGGAAATGC----TTCCTTCTGCCTGTTACAT--T-------ATTCAAGGAATCTAGTATACCCTTTTA-C--TC------TACGAGTAACGGGTATAATGAATTA-------AAAAGGCATTG----------TT-----------------------------------------------------TAGTTTT------------ATAAAACA---CA-TGGGAAT-----AATG------------------------------------------------------------------------------------AGTTGTAATCA-----------------------------------------------------------------------TCATTTTATTTTATTTTGTAG--------------GAACC-------------------------------------------TGGAAA--------------------------------------------------------------------------------------------------------------------------------CAAAAA--ACCCATCAA----------------------------------------------ATACGCA--ATCAAATG-----------ACTCCAAGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTTTGTAG--------------GAACC-------------------------------------------TGG.......................................................................................................................................................................................................................................1911.00100000010000
....................................................C----TTCCTTCTGCCTGTTACAT--T-------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
...........................................TCGGAAATGC----TTCCTTCTGCCTGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
............................................................................................................TTTTA-C--TC------TACGAGTAACGGGTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
droEre2
CTCGGCTATTGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACGT----TTCCTTCTGCCTGTTACATACT-------TTTCAACGAATCTAGTATACCCTTTTA-C--TC------TACGAGTAACGGGTATAACAACTC--------TGAT--------------TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAT--------------TATTA-------------------------------------------TA----------------------------------------------------------------TAAGATATAGGAAAATGTATTTTTTTAAAACCCTGAC----------TGCAA---------------------------------T--------------------------------------T-TGAAAATATTTAGAAAC--A-AGTA-----------ATTAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................ATACTTTATATGGTCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000010
................................ACTTTATATGGTCGGAAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
..............................ATACTTTATATGGTCGGAAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
droSec2
CTCGGCTATTGATCCTGATCAAGAATATATATACTTTATAAAGTCGGAAATTATAAAGTCCTTCTGCCTGTTACATACT-------TTTCAATGAATCTAGTATACCCTTTTA-C--TC------AACGAGTAACAGGAATAACAACAAATAGAG--G---------------------------------------------------CCGCTGTGTGCTATGAAGTAGTTAGAG----ATCTTGAACAG----------------------------------------TGTAATGAA-------------ATGGCACTTGTATT-T-------------------------------------------------------------------------------------------------------------T---------CCATTTTAATGTC-------G--------------TTGCC------------------TG-G----------------AAGTATGCAACCACC---------------------------------------------------------------------------------------------------------------------------------------TGGAGG----------------------------------------------ATACAA-------------AA---------TTAAACGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................ATATATATACTTTATAAAGTCGGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510010
.......................................................................................TTCAATGAATCTAGTATACCCTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.1411000
.TCGGCTATTGATCCTGATCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000
..CGGCTATTGATCCTGATCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100
CTCGGCTATTGATCCTGATCAAGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000
droSim2
ATCGGCTATTGATCCTGATCAGGAATATATATAGTTTATATGATCGGAAACGC----TTCCTTCTGCCTGTTACATACT-------TTTCAACGAACCTAGTATACCTTTTCA-C--AC------TACAATTAACTGGTATAATAATAA--------TAT----------------------------------TAAAACTTAAAAAAACGGTTGTGTTTTAAT---------------------------TATC---AGTTCTTA-----------------------------------------------------------------------------------------------------------------ATT--------------------GAATTATGGCC----------------------------------------------TACATTTTA-----------------------------------------GA------------------------------------------------------------------------------------------------------------------ATTTTCTATTCAAT-----TGCAC---------------------------------ATTGAAGATATTTGTTGGCTGTGAATTTAAGCAAAATATC-AATCTATATGAA--ATTAAG-T-----------ATCCCAAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.TCGGCTATTGATCCTGATCAGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2461.8311000100000010000000
................................................................TGCCTGTTACATACT-------TTTCAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.5030000000300000000000
...........................................................................................................................................................................................................................TTAAT---------------------------TATC---AGTTCTTA-----------------------------------------------------------------------------------------------------------------ATT--------------------GAATT......................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.........TGATCCTGATCAGGAATATATATAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
......................................................................................TTTCAACGAACCTAGTATACCTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...............................TAGTTTATATGATCGGAAACGC----....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
.TCGGCTATTGATCCTGATCAGGAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2661.00600000001113000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-AATCTATATGAA--ATTAAG-T-----------ATCCCAAA.2911.00100000000100000000
......................GAATATATATAGTTTATATGATCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
...............................................................CTGCCTGTTACATACT-------TTTCAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.5511000000110000000000
.......ATTGATCCTGATCAGGAATATATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.33200000000200000000
...............................................................CTGCCTGTTACATACT-------TTTCAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.30600000000060000000
...................................TTATATGATCGGAAACGC----T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.25110000000000000000
..........................................................TCCTTCTGCCTGTTACATACT-------TTTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.25500000022000001000
.......ATTGATCCTGATCAGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.22200000000002000000
.......ATTGATCCTGATCAGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.22200000000002000000
.......ATTGATCCTGATCAGGAATATATATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.20100000000010000000
......TATTGATCCTGATCAGGAATATATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000000100000000
.TCGGCTATTGATCCTGATCAGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000000001000000
.TCGGCTATTGATCCTGATCAGGAATAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.17100000000001000000
.TCGGCTATTGATCCTGATCAGGAATAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13100000000001000000
..CGGCTATTGATCCTGATCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.13100100000000000000
..........GATCCTGATCAGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16170.12200000000002000000
.......ATTGATCCTGATCAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17100.10100000000100000000
.........................................................TTCCTTCTGCCTGTTACATACT-------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000200000000
.........................................................TTCCTTCTGCCTGTTACATACT-------TTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200000000000020000
.TCGGCTATTGATCCTGATCAGGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.09100000000001000000
.TCGGCTATTGATCCTGATCAGGAATGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28120.08100000000000010000
....GCTATTGATCCTGATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.08110000000000000000
............................................CGGAAACGC----TTCCTTCTGCCTGTTACATACT-------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................31200.05100000010000000000
..................................................CGC----TTCCTTCTGCCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000001000000000
............................................................CTTCTGCCTGTTACATACT-------TTTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
.........................................................TTCCTTCTGCCTGTTACATACT-------TTTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000000010000
...............................................................CTGCCTGTTACATACT-------TTTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000010000000000
............................................................CTTCTGCCTGTTACATACT-------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000010000000
dm3
CTCGCCTATTGATTCTGATCAAGAATATATATACGTTATGTAGTCGGAAACGC----TACCTTCTGCCTGTTACATACT-------TTTCAACGAACCTAGCATAGCCTTTTA-C--TC------TTCAAATAACTGGTATAAATACCA--------C-----------------TTGA-------------------------------------------------------------------------------------------------------------------------------------------------TTA-T-------A---GCATTTGAATGGCAA------------------TAAAGGTATTACTAGAAATCAATTAAAAA---ATGTAGAT----------------------------------------------CG------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------CAGTCAAAACCTAAAACAAAAT--ACCCACTAAC--------------------------------------T-A------TTGCT--GTCAAACC------------ATCTTAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAC--------------------------------------T-A------TTGCT--GTCAAACC------------........2112.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAC--------------------------------------T-A------TTGCT--GTCAAACC------------AT......2312.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCAATTAAAAA---ATGTAGAT----------------------------------------------CG------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------CAGT................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TAAAGGTATTACTAGAAATCAATTAAAA............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTAAAACAAAAT--ACCCACTAAC--------------------------------------............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTA-T-------A---GCATTTGAATGGCAA------------------TAAAGG..................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................A---ATGTAGAT----------------------------------------------CG------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------CAGTCAAAACCCT.......................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TTGA-------------------------------------------------------------------------------------------------------------------------------------------------TTA-T-------A---GCATTTGAATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................ACGAACCTAGCATAGCCTTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAAA---ATGTAGAT----------------------------------------------CG------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------CAGTCAAA............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TTACATACT-------TTTCAACGAACCTAGCATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TACT-------TTTCAACGAACCTAGCATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGATCAAGAATATATATACGTTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTATTGATTCTGATCAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000230400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTCTGCCTGTTACATACT-------TTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCCTGTTACATACT-------TTTCAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.3060000000010000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTTCTGCCTGTTACATACT-------TT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TATTGATTCTGATCAAGAATATATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.2030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CCTTCTGCCTGTTACATACT-------TTTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CATACT-------TTTCAACGAACCTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....CTATTGATTCTGATCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTATTGATTCTGATCAAGAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22180.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTATTGATTCTGATCAAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CTGTTACATACT-------TTTCAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................................................CTTCTGCCTGTTACATACT-------TTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GTTACATACT-------TTTCAACGAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ATACT-------TTTCAACGAACCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTTCTGCCTGTTACATACT-------TTTCAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ATTGATTCTGATCAAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTTCTGCCTGTTACATACT-------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTTCTGCCTGTTACATACT-------TTTCAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGCCTGTTACATACT-------TTTCAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTCTGCCTGTTACATACT-------TTTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TCTGCCTGTTACATACT-------TTTCAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TCTGCCTGTTACATACT-------TTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TGTTACATACT-------TTTCAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TATTGATTCTGATCAAGAATATATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TGTTACATACT-------TTTCAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTGATCAAGAATATATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTTCTGCCTGTTACATACT-------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TCTGCCTGTTACATACT-------TTTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
CTTCGCTATTGATCCTGATCAAGAATATATATACTTTATAGGGTCGCAAAAGC----TTCCTTCTATCTGTTACATACT-------TTTCAACGAATCTAGTATACCCTTTTA-C--TC------TACGAGTAACGGGTATAATTATAA--------AAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-TGAAGGTAA-----------------------------------------------------------------------------------------------------------------------TAAAAATGTGAAATTTGTAAAATGTTTATTTCACGCAAAAGACATTGAAAACGAAGAAGATGT----------------------------GTAT------------------------------------------------------------------------------------------------------AAAG----------------------------------------------------------A-------------AATTGAACGATTCCA---SizeHit CountTotal NormTotal
No Reads
droBia1
CTCGGCTAGTGATCCCGA-------TATATATACTTTATGGGGTCGGAAACGC----TTCCTTATACCTGTTACATACT-------TTCCGACGAATCTAGTATACCT-TTTA-C--TC------TACCAGTAACGGGTATAATTATTT--------C------ATTATTTCTC-------------------------------------------------T---------------------------TACC---GATTCTT-TGACAGC-----TATG------------------------------------------------------------------------------------TGTT-------------------------------------------AGAGTCG----------------------------TC--------CGATTTTGTAT--------------TAATT-------------------------------------------TGAAT-------------------------------------------------------------------------------------------------------ACCGA------------------------------------------------------------------------------A--ATCTTACAAATAATAAAAAA-----------CTTCCAATASizeHit CountTotal NormTotal
No Reads
droTak1
CTCGGCTGGTGATCCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGC----TTCCTTCTAGCTGTTACACACT-------TTTGCACGAATCTAATATACCCTTTTA-C--TC------TACGAGTAACGGGTATAAAAATAT--------AAGA---ACTA----------TT-----------------------------------------------------TGACTTT------------G-----------------------------------------------------------------------------------------------------------------TGAA-------------------------------------------AAAGTGGTTTAAACTAAAATT----T---------TGATTTTAGTTTA-------G--------------TTGAA------------------TA-G----------------GAATATGAAGT----------------------------TTAT------------------------------------------------------------------------------------------------------AAAAATATTA--------------------------------------------------------ATTACAAA-----------TCTGATAACSizeHit CountTotal NormTotal
No Reads
droEle1
CTCTACTAGTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGT----CTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTCT---------------GC-----AAGGGTATCAAAATAT--------AAAA----TA------AGTTGTATA-------------------------------------------------------------------------------------------------------------------------------------------T-----------------------TTAATGGAAATAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACCACATTTATTTGATTTTT----ACAGCTTTG------TTTCTTGGATAGT----------------------------------TATC----ACTGA------------------------------------------------------------------------------A--AACCCGTTAAGAAGAAAATG-----------ACTCCTTGGSizeHit CountTotal NormTotal
No Reads
droRho1
CTCGGCTAGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGC----TTCCTTCTAGCTGTTACATACT-------TTTGCACGAATACAATATACCCTTTTA-C--TC------TACGAGTAAC-GGTATAAAAACGA--------GAAA---G--------------------------------------------------------------GAAGATAAGTTCG------------ACAAGACG-----AAGTGTAC-----ATGC------A------------------------CTTGCAGCTATATTACAAATTATTAAAATTTT-T-----------------------------------------------------------------------------------------TG-----------------------------------------------ACC-------------------------------------------TGCAAACAGCAAAAATTACACATATCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTCSizeHit CountTotal NormTotal
No Reads
droFic1
TTCAGATGGTGATGCTGATCAAGAATATATATACTTTATGGGGTCTGAGGTGT----CTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTTTTG-C--TC------TGCA-----AGGGTATAAAAATAG--------AGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-TT--AACAAGAGATCTAATTATTTGTAAACAAGATTTCTTAAAGCTTTTAGGAAAT---------------------------------------------------------------------------------------------------------------------------------CAAAGG----------------------------------------------------------------------------------------------------------------------------------ATACACCCATA--------------------------------------------------TTTCCCA--ATCAAACG-----------TATGCAAAGSizeHit CountTotal NormTotal
No Reads
droKik1
CTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGT----CTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTGC----------------------AAGGGTATAAAAATAG--------G-----------------TCGTAT----------------------------------TATA-AATATAATAATTATAA----AAT---------------------TAAATAAATAAAATGCAGCTTTTCAGATATTTTA--TTATTATGTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTCAATATATATTTCTAATGA------------------------------------------------------------------------------------------------------------------------------------------AAAAT--ACCTGTTAAT--------------------------------------T-AAAAAATATTTA--ACCAAATG-T---------ACTCCAAAASizeHit CountTotal NormTotal
No Reads
droAna3
CTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGT----CTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATTATAATACCCTTCTG-C------------------AAGGGTATAAAAATAA--------AAAA----CA------ATTAGTACA-------------------------------------------------------------------------------------------------------------------------------------------TA-------------------------------------------------------------------------------------AAGATAG-----ATTGA----AACTTTTTA-----------------------------------------------TTT-------------------------------------------CATAATCAATA---------------------------ACAGTTTTATAAATATATCTCGTATGGC----------------------------------CATACATA-----A-----------------------------------------------------------------------------A--AACATAAAAA--AAA-----AAAG-------AAAAATGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................TATAGGGTCGGAGATGT----CTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.60121200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----A-----------------------------------------------------------------------------A--AACATAAAAA--AAA-----....................18100.101010000
............................................................................................................TTCTG-C------------------AAGGGTATAAAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.071000010
.................................................ATGT----CTCCTTCACTGCGTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100
............................................................CTTCACTGCGTTGCACACT-------TTTGACCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
.............................................................................CT-------TTTGACCAAAATTATAATACCCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
....................................TATAGGGTCGGAGATGT----CTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
droBip1
CTCAGGACGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGT----CTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATTATAATACCCTCT---------------GC-----AAGGGTATAAATATATATATAGGCAAAAAACATGT-----ATTAGTTCA-------------------------------------------------------------------------------------------------------------------------------------------TA---G-T-------A---ATATAATAATAACAA--------TAATTATTATTAATATATC--------------------AAATTGTATCT----------------------------------------------CATTTTATA-----------------------------------------GAAAATACC-------------TTC-------------------------------------------------------------------------------------------------AACTTCAA-----AATCC---------------------------------ATTACAAATAAT--------------------------------------------------T-----------TTAATTTGASizeHit CountTotal NormTotal
No Reads
dp5
CTCGGCTATTGATGCTGATCAGGAATATATATACTTCATGGGGTCGAGAACGC----TTCCTTCTGTACGTTACACACATCCATTTTCACCACAAATCTAATATACCCCTATA-C--TCAT----TTTGAGTATCGGGTATAAAAATTG--------TAAT---G----------------------------------------------------------------CTTAT--------------------------------------------------------------------------------------------------------------------AAAAATTAGACAATTGATTTGTTTACCGGATT--------------------AAATTATGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT------------------------------TTGAAAATCGCGATGGAAA-----ACCTC---------------------------------TTTAAA-------------------------------------------------AAC----AGCAG--------TTAACTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................TCACCACAAATCTAATATACCCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23203.306606600000000
..............................................................................................................................TTGAGTATCGGGTATAAAAATTG--------TAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2651.4070000000700
......................................................................................TCACCACAAATCTAATATACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22201.002000200000000
............TGCTGATCAGGAATATATATACTTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...............................................................................................................................TGAGTATCGGGTATAAAAATTG--------TAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.8040000000220
............TGCTGATCAGGAATATATATACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.4590400003020
.............................................................................................................................TTTGAGTATCGGGTATAAAAATTG--------TA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000010
..............................................................................................................................TTGAGTATCGGGTATAAAAATTG--------TA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.3310100000000
.....CTATTGATGCTGATCAGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550200102000
..............................................................................................................................TTGAGTATCGGGTATAAAAATTG--------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.2510000000010
......................................................................................TCACCACAAATCTAATATACCCCTATA-C--........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.2040300000010
............TGCTGATCAGGAATATATATAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2040000002020
.....................................................................................................................TCAT----TTTGAGTATCGGGTATAAAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2040400000000
.......................AATATATATACTTCATGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.1520000000200
............TGCTGATCAGGAATATATATACTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530200001000
....................................................................................TTTCACCACAAATCTAATATACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530300000000
....................................................................................TTTCACCACAAATCTAATATACCCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530300000000
......TATTGATGCTGATCAGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530300000000
.....................................................................................................................TCAT----TTTGAGTATCGGGTATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000003000
.......................................................................................CACCACAAATCTAATATACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
.........TGATGCTGATCAGGAATATAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000001010
..............................................................................................................................TTGAGTATCGGGTATAAAAATTG--------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23180.0610100000000
...........................................................................CACATCCATTTTCACCACAAATCTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
..................................................................................................TAATATACCCCTATA-C--TCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.....CTATTGATGCTGATCAGGAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..............................................................................................................................TTGAGTATCGGGTATAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
..CGGCTATTGATGCTGATCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.......ATTGATGCTGATCAGGAATAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
.......................................................................................................................AT----TTTGAGTATCGGGTATAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..........................................................................................CACAAATCTAATATACCCCTATA-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
................................................................................................................A-C--TCAT----TTTGAGTATCGGGTATAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
......TATTGATGCTGATCAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
.......................................................................................CACCACAAATCTAATATACCCCTATA-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
......................................................................................TCACCACAAATCTAATATACCCCTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510010000000
........................................................................................................................T----TTTGAGTATCGGGTATAAAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
........TTGATGCTGATCAGGAATATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.....CTATTGATGCTGATCAGGAATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..CGGCTATTGATGCTGATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.........TGATGCTGATCAGGAATAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
............TGCTGATCAGGAATATATATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
droPer2
CTCGGCTATTGATGCTGATCAAGAATATATGTACTTTATGGGGTCGAAAACGC----TTCCTTCTCGATATTACACACATCCACTTTTATCACAAATCTAATATACCCTTACA-C--TCAT----TTTGAGTACCGGGTATAAAAATGA--------TAAC---ACA--------------------------------------------------------------ATTTCCGTTGA------------ATCCAACGCTCTTAACTGACT-----GAGG------A------------------------GTTGCAAGTCT------------------------------------------------------------------------------------------------------------------------------------------TTTGTACTTTAATGAACCCATGAACTT--TAAAATGAATAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTAA----------------------------------------A--AACGCATTTA--AAC----AACAA---------TTTACGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............TGCTGATCAAGAATATATGTACTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.408080000
............TGCTGATCAAGAATATATGTACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.408080000
............TGCTGATCAAGAATATATGTACTTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.408080000
..............CTGATCAAGAATATATGTACTTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153030000
.....................................................................................................................TCAT----TTTGAGTACCGGGTATAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.111010000
.............GCTGATCAAGAATATATGTACTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102020000
............TGCTGATCAAGAATATATGTACTTTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102110000
.............GCTGATCAAGAATATATGTACTTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102020000
.................................CTTTATGGGGTCGAAAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
..........................ATATGTACTTTATGGGGTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droWil2
CTCGGTTGTTGATCCTGATCAAGAATATATATACTTTGTGGGGTCGGAGATGC----TTCCTTCTGCCTGTTACATACA-------TTTTGGCGACTTTAATATACCATTTCA-C--CC------TATGGGTGTATGGTATAAAAAGGA--------T-----------------TTGTACA-------------------------------------------------------------------------------------------------------------------------------------------TATATCTTAAACCATCA------------AAAAAGTCGACAAATTGTGTTTATAAGGGTTTTATTAGATTATATGTGAAAA---------------------------------------------------------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------AAAACCAAACT-----------C----------------------------------------------AAAATATGTTCT--GCGATATG-----------AATCTGAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................TGC----TTCCTTCTGCCTGTTACATACA-------TTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.15303000
............................................CGGAGATGC----TTCCTTCTGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
CTCGGTTGTTGATCCTGATCAAGAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10202000
.....................................................................................................TATACCATTTCA-C--CC------TATGGGTGTATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10202000
..............................ATACTTTGTGGGGTCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
droVir3
CTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAATGC----TTCCTTCTGCCTGTTACATACATA----TTTTGCACAAATAAAATATACCCTTATA-C--CCATTTTTAATGGGTTCAGGGTATAATAAGCA--------CA--------------------------------------------------------------------GAATATAA--------------------------------------------------------------------------------------------------------------TTACTGGTAA-------------------TA---------------------------AATCATG----------TATGA----AACTTTATCTTTGTGCATATTATA-------------T----------------------------------------------------ATTATATGA----AGAA---------------------------------ACAGTTTT------------------------------------------------------------------------CAATAAAAAAAAAAAA-----------A----------------------------------------------AGAAAATATTAT--AAAATATG-----------ATATAAAGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................CAAGAATATATATACTTTATGGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.306000000000000000000000000060000000000000000000000000000000000000
.....................................................................................................................CCATTTTTAATGGGTTCAGGGTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000000000000000003000000000000000000000000
............................................................................................................TTATA-C--CCATTTTTAATGGGTTCAGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102000000000000000000000000000020000000000000000000000000000000000
............................ATATACTTTATGGGGTCGGAAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000020000000000000000000000000000000000
...........ATGCTGATCAAGAATATATATACTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000000020000000000000000000000000000000000
........................................................................................TGCACAAATAAAATATACCCTTATA-C--C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27180.061000000000000000000000000000001000000000000000000000000000000000
.................................................ATGC----TTCCTTCTGCCTGTTACATACATA----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000001000000000000000000000000000000
...................................TTATGGGGTCGGAAATGC----TTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
.........................TATATATACTTTATGGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000010000000000000000000000000000000000
......................GAATATATATACTTTATGGGGTCGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
........TTGATGCTGATCAAGAATATATATAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
...........................TATATACTTTATGGGGTCGGAAATGC----....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................CCATTTTTAATGGGTTCAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
.TCGGCTATTGATGCTGATCAAGAATATAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051000000000000000000000000000000000010000000000000000000000000000
...............TGATCAAGAATATATATACTTTATGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000100000000000000000000000000000000
..................TCAAGAATATATATACTTTATGGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
....................................TATGGGGTCGGAAATGC----TTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001000000000000000000000000000000000000000000000000000000000
..................................TTTATGGGGTCGGAAATGC----TTCCTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
............TGCTGATCAAGAATATATATACTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000000000000000000000000001000
.......ATTGATGCTGATCAAGAATATAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
................................ACTTTATGGGGTCGGAAATGC----TTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000000000000000000000000000010
............................ATATACTTTATGGGGTCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
......................................TGGGGTCGGAAATGC----TTCCTTCTGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000001000000000000000000000000000000000000000000000000000000
......TATTGATGCTGATCAAGAATATAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
.............................TATACTTTATGGGGTCGGAAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
.......ATTGATGCTGATCAAGAATAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
................GATCAAGAATATATATACTTTATGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
droMoj3
CTAAGCTCGTTGTCCTGATCAAGAATATATATACTTTATGGGGTCTGCGATAA----TTCCTTCTGCCTGTTACATACT-------TTTCA-CAAAACCATTATACCCTGATTTC--CCATTTTCAATGGGTTCAGGGTATAAAAAATA--------ATAATATTTTT-----TTTAAATAATAATAATAATATAAAGAGATAATAAA-----------------------------------------------------------------------AGG------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATTTGTATATTGTGTTTTTTAAAAAATAATA-AAAAAATATATA--TATAAT-A-----------ATAATAATASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CTCGGCTATTGACCCTGATCAATAATATATATACTTTATGGGGACGGAGATGC----TTCTTTCTGCCTGTTACATACA-------TTTGCATAAAACCATTATACCCTTTAA-TGATC-------------AAC-TGTGTAT-----------------------------------------------------------------------------TG-GAAGTAATTAGAGTCAAA--TCTAACAA----------------------------------------TTTTTTA--ATATTATACTAAT--------------------------------------------------------------------------------------------TACTAC-------CG----------GCTCATTTTTCGTGCTAATTATTTTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTAAAAAAC----C--AA---------ATAAATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:20 AM