ID:

dya_1159

 Coordinate:

3R:26891566-26891740 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.1 -22.8 -22.2

Flybase annnotation

exon [dyak_GLEANR_7201:2]; CDS [Dyak\Tpi-cds]; exon [dyak_GLEANR_7201:1]; CDS [Dyak\Tpi-cds]; intron [Dyak\Tpi-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTCCAAAGCTCTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGTACATCAGCAGACGAACTTCGAGGTGGGTGTGTGCTCCGTGCCGGGATTTATCTCGAAACTGGGGGAAAATCTGAGTGGAAAAGTCGCCGGCGAGCCTCCAGTCATCGAGTCACCCACTTGATGTTATCAATTTTCAACACTCCAATAGTAATCCCCTCAAATTTCGCAGTTCTTCGCAAATTTCAGCACCGATTGCACCGACAGCGACAGCAACAGCAA
*********************************************************************.........((..(((.....(((..((..((((((.((((........))))))))))..))))).....)))..))******************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 M056
embryo
 V120
male body		 V046
embryo
 V058
head
 GSM1528802
follicle cells
.......................................................TACATCAGCAGACGAACTTCGAGTTC.................................................................................................................................................................................................. 26 2 1 8.00 8 7 1 0 0 0 0
.....................................................................AACTTCGAGGTGGGTGTG............................................................................................................................................................................................ 18 0 1 7.00 7 0 5 1 0 1 0
....................................................................................................................................................................................................................................TTCGCAAATTTCAGCACCGATTGCACC.................... 27 0 1 5.00 5 3 2 0 0 0 0
.............................................................................................................................................................................................................................................TTCAGCACCGATTGCACCGACAGCGAC........... 27 0 1 2.00 2 2 0 0 0 0 0
............................................................CAGCAGACGAACTTCGAGTT................................................................................................................................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0
.........................................................................................................................................................................................................................................................TGCACCGACAGCGACAGCAAC..... 21 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACC............................. 19 0 1 1.00 1 1 0 0 0 0 0
......................................................................ACTTCGAGGTGGGTGTGTGCTCCG..................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0
............TCAAGTGCCAGTGGAAGACT................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0
..............AAGTGCCAGTGGAAGACTTACGA.............................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0
.....................................................................AACTTCGAGGTGGGTGTGTGCTCCG..................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
....................................................................GAACTTCGAGGTGGGTGTG............................................................................................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0
.......................................................TACATCAGCAGACGAACTTCGAGGTG.................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
...........................................................TCAGCAGACGAACTTCGAGT.................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0
...................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACCGATTG........................ 24 0 1 1.00 1 1 0 0 0 0 0
.........................................................CATCAGCAGACGAACTTCGA...................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0
....................................................TAGTACATCAGCAGACGAACTTCGAG..................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................CGCAAATTTCAGCACCGAT.......................... 19 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................TTTCAGCACCGATTGCACCGACAGCGAC........... 28 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................AAAATCTGAGTGGAAAAGTCGCCGGC................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0
..............................................................GCAGACGAACTTCGAGGTGGGTG.............................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................................GCAAATTTCAGCACCGATTGCACCGAC................. 27 0 1 1.00 1 0 1 0 0 0 0
.......................................................TACATCAGCAGACGAACTTCGAGTT................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................GCACCGATTGCACCGACAGCGACA.......... 24 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................CGCAAATTTCAGCACCGATTGCACCGAC................. 28 0 1 1.00 1 1 0 0 0 0 0
..........................................................ATCAGCAGACGAACTTCGAGTT................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................TCAGCAGACGAACTTCGAGG.................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACCGATTGC....................... 25 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................................TTCAGCACCGATTGCACCGAC................. 21 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................CACCGACAGCGACAGCAACA.... 20 0 1 1.00 1 0 0 0 1 0 0
.......................................................TACATCAGCAGACGAACTTCGAGT.................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................TTTCAGCACCGATTGCACCGACAGC.............. 25 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................GCACCGATTGCACCGACTGC.............. 20 1 2 0.50 1 0 1 0 0 0 0
..........................................................................CGAGGTGGGTGTGTGCTCCG..................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................ACCGACAGCGTCAGCAACC.... 19 2 4 0.25 1 0 0 0 0 1 0
.....................AGTGGATTACTTTCGAAGGT.......................................................................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0
............................................................................................................................................................GTCATCGCGGCACCCACCT.................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

AAGGTTTCGAGAAGTTCACGGTCACCTTCTGAATGCTTCCAGTTTTCTTCCAATCATGTAGTCGTCTGCTTGAAGCTCCACCCACACACGAGGCACGGCCCTAAATAGAGCTTTGACCCCCTTTTAGACTCACCTTTTCAGCGGCCGCTCGGAGGTCAGTAGCTCAGTGGGTGAACTACAATAGTTAAAAGTTGTGAGGTTATCATTAGGGGAGTTTAAAGCGTCAAGAAGCGTTTAAAGTCGTGGCTAACGTGGCTGTCGCTGTCGTTGTCGTT
********************************************************************************************************************************.........((..(((.....(((..((..((((((.((((........))))))))))..))))).....)))..))********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V120
male body		 M043
female body
 M056
embryo
 V046
embryo
................................ATGCTTCCAGTTTTCCTCAT............................................................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0
...........................TCAGAATGCTGCCAGTTCT..................................................................................................................................................................................................................................... 19 3 20 0.10 2 0 1 0 1
........................................................................................................................................................................................TTAAGAGTTGGGAGGTTAA........................................................................ 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3R:26891516-26891790 - dya_1159 TTCCAAAGCTCTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCCGTGCCGG---G--ATTTAT-------CTCGAAACTGGGGG--------AAAATCTGAGTG------------GAAAAGTCGCCGGCGAGCCTCCAGTCATCGAGTCA-CCC---------------ACT---------------TGATGTTATCAATTTTCAACACTCCA------------ATA---GTA-------A---------------------------------------------------TCCCCT----C---AAAT----------------T-TCGCAGTTCTTCGCAAATTTCAGCACCGATTGCACCGACAGCGACAGC---AACAGC------AA
droEre2 scaffold_4820:2040014-2040292 + der_921 TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCCGTGCCGG---G--AATAAT-------CTCGAAGCTGGGAG--------AAAATCTGAGTG------------GAAAAGTCGACGGCGAGCCTCCAGTCAGCGAGTTC-CCC---------------ACT---------------TGAAATTATCAGTTCCCAGCACTCCA------------ATA---GTA-------A---------------------------------------------------TCCCCT----TGTCTTGT--------CC-ACCGAT-CCGCAGTTCTACGCAAATTTCAGCACCGACTGCACCG------ACAGC---AACAGC------GA
droSec2 scaffold_4:4812638-4812915 - dse_1304 TCCCAAAGCTTTTTAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAAT-------CTCGAATCTGGG-G--------AAAATCTGAGTG------------GAAAAGTCGACGGCGAGCCTCCATTCAACGAGTCC-CCC---------------ACT---------------TGAAATTATCAGTTCCAAACACTCTA------------ATA---ATA-------G---------------------------------------------------TCCCCT----TCTTTTGT--------CC-ACCGAT-CCGCAGTTCTACGCCAATTTCAGCACCGATTGCACCG------ACAGC---AACAGC------AA
droSim2 3r:25305304-25305581 - dsi_28675 TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAAT-------CTCGAATCTGGG-G--------AAAATCTGAGTG------------GAAAAGTCGACGACGAGCCTCCATTCAACGAGTTC-CCT---------------ACT---------------TGAAATTATCAGTTCCAAACACTCTA------------ATA---ATA-------G---------------------------------------------------TCCCCT----TCTTTTGT--------CC-ACCGAT-CCGCAGTTCTACGCCAATTTCAGCACCGATTGCACCG------ACAGC---AACAGC------AA
dm3 chr3R:25959773-25960050 - TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAAT-------CTCGAATCTGGG-A--------AAAATCTGAGTG------------GAAAAGTCGACGGCGAGCCTCCAGTCATCGAGTTA-CCC---------------ACT---------------TGAAATTATCAGTTCCAAACACTCTA------------ATA---GCA-------G---------------------------------------------------TCCCCT----TGTTTTGT--------CC-CCCGAT-CCGCAGTTCTACGCCAATTTCAGCACCGATTGCACCG------ACAGC---AACAGC------AA
droEug1 scf7180000409555:444001-444270 - TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTG-------CCGG---G--ATTAAT-------CTCGAAATTGAA-A--------GAAAACTGAAAG------------GAAAAGTTTGCGGCGAGCCTCCAGTCATCGAATTC-CCC---------------ACT---------------TGAAATTATCAGTTCCAAACACTCGA------------CTA---A-----------------------------------CT------------------C-----TCCCGTACT-AT-TTTAT--------CC-CTCGAC-CCGTAGTTCTACGCCAATTTTAGCACCGACTGCACCG------AAG------ACAGC------AA
droBia1 scf7180000302113:1425105-1425363 + TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACCTCGAGGTGGGT-------------CGG---G--CAAAAT-------CGAGAAAATAGG-G--------GATAACTAAGAG------------GAAAAGTTGACGGCGAGCCTCCCGTCACCGAGACA-CCC---------------ACC---------------TGAACCTATCAGTTCCCAACACTCGA------------CTT---ATA-------G---------------------------------------------------AC-A------CC-CCTG-----------------T-TCCCAGTTCTACGCCAATTTCAGTACCGAGTGCACCG------ACAGC---AACACCAGCGACAC
droTak1 scf7180000415765:391356-391629 - TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATCAGCAGCAGACGAACTACGAGGTGGGTGTGTT-------TTAGAGCA--ATCTCCTCCGAATT---AAA-GGAG-G--------AAAATC--AAAG------------GAAAAGTGGGTGACGAGCCTCCATTCA----------------------------CT---------------TGAAATTATCAGTTCCAAACATTCGA------------CTTATAGA--------G---------------------------------------------------ACCCCT----AT-TTCGT---A----TC-GCCTAT-CCCCAGTTCTACGCCAATTTCAGTACCGATTGCAGCG------ACAGCAACAACAGC---AATAG
droEle1 scf7180000491280:2249903-2250167 - TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAGCTTCGAGGTGGGTGTGTG-------CCGG--TA--ATTTCT-------CCTGAAATTTGGCC--------AATTACTAAACG------------GAAAAGTTAACGGCGAGCCTCCAGTCA----------------------------CT---------------CGAAATTACCAGTTTCAAACACTCGA------------CTT---A-----------------------------------CT------------------T-----TCCACT----ATTTTACA--------CC-CCCGACTTTGCAGTTCTACGCCAATTTCAGCACCGATTGTAAC---ACCGACAAC---AACAGC------AA
droRho1 scf7180000779336:462-734 + TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTG-------CCGG--TA--ATTTCT-------CTCGAAATTAGG-C--------AAAAATGAAAAG------------GAAAAGTTAACGGCGAGCCTCCATTCATCGAATCTCCCC---------------ACT---------------TAAAATTATCAGTTCCAAACACTCAA------------CTA---A-----------------------------------CT------------------T-----TACT------AC-TTTAT--------CC-CTCGACCTCGCAGTTCTACGCCAATTTCAGCACCGACTGTATCG------ACAAC---AACAGC---AAC-A
droFic1 scf7180000454073:3379802-3380078 + TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGGACTTCGAGGTGGGTGTGTG-------CCGG--CG--ATCTCT-------CCGGAAATTCAG-G--------AAAACCTGAAAG------------AAAAAGTGACCGGCAAGCCTCCTGTCACCAAATTA-CCC----------------CT---------------TGAGCTTACCGGCTCGGAACTCTCCA------------CCA---GTCACTGATAAACTAA--------------------CC----------------------AAT----------------------------CCCGAT-CCGCAGTTCTACGCCAATTTCAGCACCGATTGCATCG------ACACCAACAACATGAGC----G
droKik1 scf7180000302261:408715-408980 - TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAGAAGAAGGTTAGT----ACATCATCAGCAGACGGACTTCGAGGTGGGTGTGTG-------CCGGGCCGTGCCTGGC-------CGG-GATTTCAG-GGG------ACTTTCT--GGC------------CCAAAGTTGGCTGCGAGTCTCCAGTCATT-------------------------------------------CGTAGC--------------------------------------------------CCAACAGTTCCAGACCCAAACTCACT------------------T-----TC-A------TC-CGTATCT------TC-TC-----CGGCAGTTCTTTGCCAATTTCAGCACCGAAAACATCATCACCGCCAGC---AACAGC------AA
droAna3 scaffold_13340:20949419-20949678 - dan_3206 TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----ACA------GCAGA----CTTCGAGGTGGGTGTGTG-------CCGG---A--ATCTCT-------AACAA-----------------AAAATT---ATT------------AAAAAGTTGACTAGGATTTATCTATCAAA---TTA---------------------T---------------AAAAATTATTTGTTTTACTCACTTGACCTGGCTACCAACTA---A-----------------------------------CT------------------CGTCAACCTCTT----C---ACCTTTA--------TC-----CGGCAGTTTTACGCCAATTTCAGTACCGACTGCAACG------AGAGC---AACATGAGCGGC--
droBip1 scf7180000396413:1452550-1452806 + TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----A-------AGCAGA----CTTCGAGGTGGGTGTGTG-------CCGG---A--ATCTCT-------AACAA------------------AAATT---ATT-AATTAAATAAGAAAAAGTTGACGGGGAGTTTTCAATCATT-----C-CCC---------------A------------------AAAATTATTAGTCTTACACACTTGACCTGGCAACCGACTA---A-----------------------------------CT------------------CGCCAACCTCTT----T---ACCTTTTT--------C-----CGGCAGTTTTACGCCAATTTCAGCACCGACTGCAACG------AGAGC-----------------
dp5 2:1545532-1545750 + dps_292 TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---TC-----------------------------------------------TT-------AGCGAAATTG--------------TAAGTAAAAG------------AAAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCA----------------ACA-CTGCCCGTATCGAAATTACC-GTTTTCAACATCTAA------------CTA---A-----------------------------------CT------------------------TACT------CT-TGCATTCTTGC--GGACCCGGC-CTGAAGCTCTACGCAAACTTCAGCACAAAC---------------------------------AG
droPer2 scaffold_7:4348434-4348652 + TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---TC-----------------------------------------------TT-------AGCGAAATTG--------------TAAGTAAAAG------------AAAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCA----------------ACA-CTGCCCGTATCGAAATTACC-GTTTTCAACATCTAA------------CTA---A-----------------------------------CT------------------------TACT------CT-TGCATTCTTGC--GGACCCGGC-CTGAAGCTCTACGCAAACTTCAGCACAGACAG---------------------------------
droWil2 scf2_1100000004943:9413787-9414032 - dwi_3397 TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGT----ACATC---AGTAGATTGCATTCGAGGTGGGTGTGTT-------T-----------------------GCGAAA----------------------------------------------TAGCGGCGATTTTTCTATCAAATCTATC-TAT--ATCTGTGCACATA--TAACAATTGCT--TATCAAAATTTCCAGTAATTGGAGTTTAA------------CTA---T-----------------------------------AT------------------T-----TCCT------TT-CTTATTTTTC---CG-GCCGGC-AAATAGTTTTACGCAGACTTCAGTACAGACA------------------------AC------AG
droVir3 scaffold_12855:3594842-3595104 - dvi_3748 TTCCTAAGCTTTTCAAGTGCCAATGGAAGACGTATGAAGGTCAGAAGAAGGTTAGT----ACATC---GTTTCATTACGTTCGAGGTGGGTGTGTT-------TAGG-CCA--------------------A-----G-T--AAAACCAAAATTAAAGCA------AATAAATCATTTTTTACGGCGATTTATCAATCAAA--ATTT-TGC---------------ATT------TAGT--TAACAAAATTATCAATTTGTAGCAGCTAA------------ATT---A-----------------------------------AT------------------G-----TTTGGT-----------TTTTTCCACAC-TCCGGC-GTGCAGCTTTACGCGAATTTCAGTGCAGACTCCGTT---------------------------AA
droMoj3 scaffold_6540:7886427-7886704 - dmo_1861 TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACATTCGAGGTGGGTCTCTG-------TCGT-CCG--TTTAAA-------TACGAAT----------------AAAAGTAAAAGT-----------GAACTTTTCCCGGCGATTTATTAATCAAAATT--T-T--------------------AGCATTTAC------------------TACCTAACACTCAA------------A-------------------------------------ATTTCTCTTATCCAATATTTTAATG-----TTTGAT---ATCTCTTAC--------TT-TCCGGC-GTGCAGCTCTACGCGAACTTCTCCAAAGAC---ACCG------TCAGC---AACATG------AG
droGri2 scaffold_14906:6254890-6255128 - TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACGCTCGAGGTGGGTGCGTTTTTT-----------------TC-------AGC-AA----------------ATAAAGTAAAAGC-----------AAAAATCAAGCGACGATTCATCAATCAAAACCTTT-TGC---------------ATA------TACT-----TAACAACATTATTATT------------------------A---A-----------------------------------CT------------------T-----TAAT-----ATATTCTGT--------TT-TGCGGT-GTGCAGCTCTTTGCGAATTTCAACACAGACTCA------------------------------AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TTCCAAAGCTCTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCCGTGCCGG---G--ATTTAT-------CTCGAAACTGGGGG--------AAAATCTGAGTG------------GAAAAGTCGCCGGCGAGCCTCCAGTCATCGAGTCA-CCC---------------ACT---------------TGATGTTATCAATTTTCAACACTCCA------------ATA---GTA-------A---------------------------------------------------TCCCCT----C---AAAT----------------T-TCGCAGTTCTTCGCAAATTTCAGCACCGATTGCACCGACAGCGACAGC---AACAGC------AASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................AACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................1817.00700500110000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTCGCAAATTTCAGCACCGATTGCACC.............................2715.00503200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCACCGATTGCACCGACAGCGAC....................2712.00202000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACCGACAGCGACAGC---AAC...........2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACC......................................1911.00101000000000
.............................................................................ACTTCGAGGTGGGTGTGTGCTCCG..............................................................................................................................................................................................................................................................................................................................................................2411.00100010000000
............TCAAGTGCCAGTGGAAGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
..............AAGTGCCAGTGGAAGACTTACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
............................................................................AACTTCGAGGTGGGTGTGTGCTCCG..............................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
...........................................................................GAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.......................................................T----ACATC---AGCAGACGAACTTCGAGGTG...........................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...............................................................TC---AGCAGACGAACTTCGAGT.............................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACCGATTG.................................2411.00101000000000
.............................................................CATC---AGCAGACGAACTTCGA...............................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................TAGT----ACATC---AGCAGACGAACTTCGAG..............................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGCAAATTTCAGCACCGAT...................................1911.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGCACCGATTGCACCGACAGCGAC....................2811.00101000000000
....................................................................................................................................................AAAATCTGAGTG------------GAAAAGTCGCCGGC.........................................................................................................................................................................................................................................................................2611.00100100000000
.....................................................................GCAGACGAACTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCAAATTTCAGCACCGATTGCACCGAC..........................2711.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GCACCGATTGCACCGACAGCGACA...................2411.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGCAAATTTCAGCACCGATTGCACCGAC..........................2811.00101000000000
...............................................................TC---AGCAGACGAACTTCGAGG.............................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACCGATTGC................................2511.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCACCGATTGCACCGAC..........................2111.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGACAGCGACAGC---AACA..........2011.00100010000000
.......................................................T----ACATC---AGCAGACGAACTTCGAGT.............................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGCACCGATTGCACCGACAGC.......................2511.00101000000000
.................................................................................CGAGGTGGGTGTGTGCTCCG..............................................................................................................................................................................................................................................................................................................................................................2020.50101000000000
droEre2
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCCGTGCCGG---G--AATAAT-------CTCGAAGCTGGGAG--------AAAATCTGAGTG------------GAAAAGTCGACGGCGAGCCTCCAGTCAGCGAGTTC-CCC---------------ACT---------------TGAAATTATCAGTTCCCAGCACTCCA------------ATA---GTA-------A---------------------------------------------------TCCCCT----TGTCTTGT--------CC-ACCGAT-CCGCAGTTCTACGCAAATTTCAGCACCGACTGCACCG------ACAGC---AACAGC------GASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................AACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................18121.002110000200
..........................................................................CGAACTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................1813.0030000030
.......................................................................AGACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2313.0030001110
...................................................................................AGGTGGGTGTGTGCTCCG..............................................................................................................................................................................................................................................................................................................................................................1822.5050001040
....................................................................AGCAGACGAACTTCGAGGTGGGT........................................................................................................................................................................................................................................................................................................................................................................2312.0020000020
.......................................................................AGACGAACTTCGAGGTGGG.........................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
.............................................................................ACTTCGAGGTGGGTGTGT....................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................CTACGCAAATTTCAGCACCG.....................................2011.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................GCAAATTTCAGCACCGACTGCAC..............................2311.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGCACCGACTGCACC.............................2011.0010100000
.............................................................................................................................................................................AAAAGTCGACGGCGAGCCTCCAGTCA............................................................................................................................................................................................................................................................2611.0010000100
......................................................GT----ACATC---AGCAGACGAACTTCGAGG.............................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
............................................................................AACTTCGAGGTGGGTGTGTGCTCCGTG............................................................................................................................................................................................................................................................................................................................................................2711.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................CGACTGCACCG------ACAGC---AACAGC------..2211.0010100000
............................................................ACATC---AGCAGACGAACTTCGA...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.........................................................................................................................................................................................................GAGTTC-CCC---------------ACT---------------TGAAATTATCAGTT.................................................................................................................................................................................................2611.0011000000
..........................................................................................................................................................................................................................................................................................ATA---GTA-------A---------------------------------------------------TCCCCT----TGTCTTGT--------CC-........................................................................2311.0010000100
......................................................................................................................................................AATCTGAGTG------------GAAAAGTCGAC............................................................................................................................................................................................................................................................................2111.0010100000
..........................................................................CGAACTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................CTTGT--------CC-ACCGAT-CCGCAGT..........................................................2011.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................CGCAAATTTCAGCACCGACTGC................................2211.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................GCACCGACTGCACCG------ACAGC---AACAGC------..2611.0010001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CCGACTGCACCG------ACAGC---AACAGC------G.2411.0011000000
.......................................................................AGACGAACTTCGAGGTGGGTGTGT....................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCACCGACTGCACCG------ACAGC---AACAGC------..2911.0010100000
............................................................................................................................................................AGTG------------GAAAAGTCGACGGC.........................................................................................................................................................................................................................................................................1811.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCACCGACTGCACCG------ACAGC---AACA..........2811.0011000000
.....................................................AGT----ACATC---AGCAGACGAACTTCGA...............................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................GAT-CCGCAGTTCTACGCAAATTTCAGC.........................................2711.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGCACCGACTGCACCG------ACA...................2411.0010000100
.....................................................................GCAGACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..............................................................................CTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.............................................................................ACTTCGAGGTGGGTGTGTGCT.................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................................................ATC---AGCAGACGAACTTCG................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGCACCGACTGCACCG------AC....................2311.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTCTACGCAAATTTCAGCA........................................2011.0010000010
........................................................................................................................................................................................................................................................ATTATCAGTTCCCAGCACTCCA------------ATA---GT.................................................................................................................................................................2711.0010000100
.............................................................................ACTTCGAGGTGGGTGTGTGCTCCGTGCC..........................................................................................................................................................................................................................................................................................................................................................2811.0010000010
............................................................................................................................................................................................................................................................................................A---GTA-------A---------------------------------------------------TCCCCT----TGTCTTGT--------CC-ACCG....................................................................2511.0011000000
...................................................................................AGGTGGGTGTGTGCTCCGTG............................................................................................................................................................................................................................................................................................................................................................2020.5010000010
droSec2
TCCCAAAGCTTTTTAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAAT-------CTCGAATCTGGG-G--------AAAATCTGAGTG------------GAAAAGTCGACGGCGAGCCTCCATTCAACGAGTCC-CCC---------------ACT---------------TGAAATTATCAGTTCCAAACACTCTA------------ATA---ATA-------G---------------------------------------------------TCCCCT----TCTTTTGT--------CC-ACCGAT-CCGCAGTTCTACGCCAATTTCAGCACCGATTGCACCG------ACAGC---AACAGC------AASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................AACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................18134.003431723
..........................................................................CGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................20110.00101207
............................................................................AACTTCGAGGTGGGTGTGTGCTCTG..............................................................................................................................................................................................................................................................................................................................................................2516.0060321
............................................................................AACTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................2016.0060303
..........................................................................CGAACTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................1815.0051004
............................................................................AACTTCGAGGTGGGTGTGTGCT.................................................................................................................................................................................................................................................................................................................................................................2214.0040112
...........................................................................GAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................1914.0041102
...................................................................................AGGTGGGTGTGTGCTCTG..............................................................................................................................................................................................................................................................................................................................................................1813.0031011
..........................................................................CGAACTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................2213.0031101
...........................................................................GAACTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................2113.0030102
...................................................................................AGGTGGGTGTGTGCTCTGTGC...........................................................................................................................................................................................................................................................................................................................................................2112.0020101
.....................................................................GCAGACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2512.0020002
............................................................................AACTTCGAGGTGGGTGTGTGCTCT...............................................................................................................................................................................................................................................................................................................................................................2412.0021100
.........................................................................ACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2112.0020101
............................................................................AACTTCGAGGTGGGTGTGTGCTCTGT.............................................................................................................................................................................................................................................................................................................................................................2612.0020200
........................................................................GACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2212.0020002
.........................................................................ACGAACTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................1912.0020002
...........................................................................GAACTTCGAGGTGGGTGTGTGCTCTG..............................................................................................................................................................................................................................................................................................................................................................2611.0010100
...............................................................TA---AGCAGACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2811.0010100
...................................................................................AGGTGGGTGTGTGCTCTGTGCCGG---.....................................................................................................................................................................................................................................................................................................................................................2411.0010001
...............................................................TA---AGCAGACGAACTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................2611.0010001
........................................................................GACGAACTTCGAGGTGGGTGTGTGC..................................................................................................................................................................................................................................................................................................................................................................2511.0010001
.........................................................................ACGAACTTCGAGGTGGGTGTGTGCT.................................................................................................................................................................................................................................................................................................................................................................2511.0010100
........................................................................GACGAACTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................2411.0010001
...........................................................................GAACTTCGAGGTGGGTGT......................................................................................................................................................................................................................................................................................................................................................................1811.0010001
............................................................................AACTTCGAGGTGGGTGTGT....................................................................................................................................................................................................................................................................................................................................................................1911.0010010
................................................................................................................................................................................AGTCGACGGCGAGCCTCCA................................................................................................................................................................................................................................................................1911.0011000
...........................................................................GAACTTCGAGGTGGGTGTGTGCTCTGT.............................................................................................................................................................................................................................................................................................................................................................2711.0010001
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCGATTGCACCG------ACAGC---AACA..........2511.0010010
..............................................................ATA---AGCAGACGAACTTCGA...............................................................................................................................................................................................................................................................................................................................................................................1911.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGCACCGATTGCACCG------ACAGC---AAC...........2511.0010010
.....................................................................................GTGGGTGTGTGCTCTGTGC...........................................................................................................................................................................................................................................................................................................................................................1911.0011000
...................................................................................AGGTGGGTGTGTGCTCTGTGCCGG---G--AT................................................................................................................................................................................................................................................................................................................................................2711.0010100
............................................................................AACTTCGAGGTGGGTGTGTGCTCTGTG............................................................................................................................................................................................................................................................................................................................................................2711.0011000
.........................................................................ACGAACTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...................................................................................AGGTGGGTGTGTGCTCTGTGCC..........................................................................................................................................................................................................................................................................................................................................................2211.0010001
..........................................................................................................................................................................................GAGCCTCCATTCAACGAGTCC-CC.................................................................................................................................................................................................................................................2311.0010100
.................................................................................CGAGGTGGGTGTGTGCTC................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.......................................................................AGACGAACTTCGAGGTGGGTGTGTGCT.................................................................................................................................................................................................................................................................................................................................................................2711.0010100
............................................................................AACTTCGAGGTGGGTGTGTGCTC................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...................................................................................AGGTGGGTGTGTGCTCTGTGCCGG---G--..................................................................................................................................................................................................................................................................................................................................................2511.0010001
..........................................................................................................................................................................................................................................................................................................G---------------------------------------------------TCCCCT----TCTTTTGT--------CC-ACCGAT-CCGCAG...........................................................2911.0010100
.................................................................................................................................GAATCTGGG-G--------AAAATCTGAGTG------------.......................................................................................................................................................................................................................................................................................2211.0011000
droSim2
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAAT-------CTCGAATCTGGG-G--------AAAATCTGAGTG------------GAAAAGTCGACGACGAGCCTCCATTCAACGAGTTC-CCT---------------ACT---------------TGAAATTATCAGTTCCAAACACTCTA------------ATA---ATA-------G---------------------------------------------------TCCCCT----TCTTTTGT--------CC-ACCGAT-CCGCAGTTCTACGCCAATTTCAGCACCGATTGCACCG------ACAGC---AACAGC------AASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................AACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................1818.00810010200004000000
...................................................................................AGGTGGGTGTGTGCTCTG..............................................................................................................................................................................................................................................................................................................................................................1815.00501000000003100000
...............................................................................................................................................................................AAGTCGACGACGAGCCTCC.................................................................................................................................................................................................................................................................1912.00220000000000000000
......................................................................CAGACGAACTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
............................................................................................................................................................................GAAAAGTCGACGACGAGCCTCC.................................................................................................................................................................................................................................................................2211.00101000000000000000
...CAAAGCTTTTCAAGTGCCAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
...................................................................................................................................ATCTGGG-G--------AAAATCTGAGTG------------GAA....................................................................................................................................................................................................................................................................................2311.00100000000010000000
...............................................................TA---AGCAGACGAACTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
........................................................................GACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.....................................................................................................................................................................................................CAACGAGTTC-CCT---------------ACT---------------TGAAATTATC.....................................................................................................................................................................................................2611.00100000000000100000
..........................................................................CGAACTTCGAGGTGGGTGTGTGCTCTG..............................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TACGCCAATTTCAGCACCGATTGCACC.............................2711.00100000000000010000
............................................................................AACTTCGAGGTGGGTGTGTGCTCTG..............................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
...............................TTACGAAGGTCAAAAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
..............................................................ATA---AGCAGACGAACT...................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
..........................................................................CGAACTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
............................................................................AACTTCGAGGTGGGTGTGTGCTCTGT.............................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
.....................................................AGT----ACATA---AGCAGACGAACTTCGAGT.............................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
................................................................A---AGCAGACGAACTTCGAGT.............................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
..............................................................................................................................................................TG------------GAAAAGTCGACGACGAGCCT...................................................................................................................................................................................................................................................................2211.00100000000001000000
.....................................................AGT----ACATA---AGCAGACGAACTTCGAG..............................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...................................................................................AGGTGGGTGTGTGCTCTGTGCCGG---G--AT................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.........................................................................................................................................................CTGAGTG------------GAAAAGTCGACGG..........................................................................................................................................................................................................................................................................2011.00100000000000010000
.........................................................................................GTGTGTGCTCTGTGCCGG---G--A.................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
........................................................................GACGAACTTCGAGGTGGGTGTGTGCT.................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
...............................................................TA---AGCAGACGAACTTCGAGGTAT..........................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
......................................................................................TGGGTGTGTGCTCTGTGC...........................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..........................................................................CGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...............................................................TA---AGCAGACGAACTTCGAGT.............................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
dm3
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAAT-------CTCGAATCTGGG-A--------AAAATCTGAGTG------------GAAAAGTCGACGGCGAGCCTCCAGTCATCGAGTTA-CCC---------------ACT---------------TGAAATTATCAGTTCCAAACACTCTA------------ATA---GCA-------G---------------------------------------------------TCCCCT----TGTTTTGT--------CC-CCCGAT-CCGCAGTTCTACGCCAATTTCAGCACCGATTGCACCG------ACAGC---AACAGC------AASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................AACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................1811029.00102900000000000000000000001000000000000002001100200110022000000000000000000000000000000000010002001001000120014100000001000000000000000000000000000001110340040000000667300100000000000000340000031000007120000000000000123813131010100110020000000203004101300006819193668811199540116182472100000000451702211010412450429629012100412150273672239312529171483110079403490
...................................................................................AGGTGGGTGTGTGCTCTG..............................................................................................................................................................................................................................................................................................................................................................181514.0051400000000000000000000000000000000000000010010000000000000000000000000000000000000000000010005001201000017013110000010000000000000000000000000000000000010000020000000030010000000000000000000000110000004000000000000040160002110111120000000508007284001043231001426923411544249430000000026401110040321140215111122001131211641511117915101500200000315121550
..........................................................................CGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................20173.00730000000000000000000000000000000000000001000010000000000000000000000000000000000000000001000000100000000010000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000100002001000000000000000100000000000330101100000000000000000000000300000000101011000000011024603585000000020014210
............................................................................AACTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................20162.00620000000000000000000000000000000000000000000001000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000030000110001001000000000000010000000000100101000000033037203157010111100011130
............................................................................AACTTCGAGGTGGGTGTGTGCTCTG..............................................................................................................................................................................................................................................................................................................................................................25142.00420000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000100000200000000300000000000000000000000000000000001000000000000000000010000001106000100122103002210100300000100100
.........................................................................ACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................21136.00360000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000300000000000000000000000000000000000000000000000000000004000200000000000000000000000000000010001000001000000000000000000000000020000000100002000000001002200212002000000001300
..........................................................................CGAACTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................18130.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000050000000001000000000000000000000000000000000000000000001000000000000000000000000000000000000020000000000000020100000000000100000000000000000000000140001000000020000000000000020000000000100000000000010000001001000000000000000
...........................................................................GAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................19125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000110000100000001000000000000000100000000000200000000010002400010000200000002300
........................................................................GACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................22121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000100000000100000000000000000000000000103000000000103001211001000000000100
.....................................................AGT----ACATA---AGCAGACGAACT...................................................................................................................................................................................................................................................................................................................................................................................20119.001900000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000100000001000000000000000000
............................................................................AACTTCGAGGTGGGTGTGT....................................................................................................................................................................................................................................................................................................................................................................19114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000100000200000000102010200010000000000001000
.............................................................................ACTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................19113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000001013000011001000011001000
.......................................................................AGACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................23113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000001000000000000010000000000100001000000000001100011000100000001000
......................................................................CAGACGAACTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................24113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000010000110001000114000000000
............................................................................AACTTCGAGGTGGGTGTGTGCTCTGT.............................................................................................................................................................................................................................................................................................................................................................26112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000002000000001001000000300100100000100
.............................................................................ACTTCGAGGTGGGTGTGTGCTCTG..............................................................................................................................................................................................................................................................................................................................................................24112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000100000101000000001012000100100000000000000
..............................................................................CTTCGAGGTGGGTGTGTG...................................................................................................................................................................................................................................................................................................................................................................18110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000030000000000000000000000000000200000000000000000000000000010000000000000001000000000000000000
.....................................................AGT----ACATA---AGCAGACGAACTTCGA...............................................................................................................................................................................................................................................................................................................................................................................24110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000121100020100000000001000
.........................................................................ACGAACTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................19110.00100000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000020000000000000000000000000000000000000000000000000000000000000100000000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................ATCTGAGTG------------GAAAAGTCGACGGC.........................................................................................................................................................................................................................................................................23110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000010000010000000100100110000000000001000000000000
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....................................................................................GGTGGGTGTGTGCTCTGTGCCGG---G--..................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACCGATTGCACCG------ACAGC---AACAGC------A.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CTTCGAGGTGGGTGTGTGCTC................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TGAGTG------------GAAAAGTCGACGGC.........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGCCAATTTCAGCACCGATTG.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CGAACTTCGAGGTGGGTGTT.....................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CCAATTTCAGCACCGATTG.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GAGGTGGGTGTGTGCTCTGTG............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................AAGGTCAAAAGAAGGTTAGT----AC.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................CAATTTCAGCACCGATTGCACCG------ACAGC---..............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................GTGGGTGTGTGCTCTGTGCC..........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................ACTTCGAGGTGGGTGTGTGCTCTGTG............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............TCAAGTGCCAGTGGAAGACTTACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GACGAACTTCGAGGTGGGTGTGTGCTCT...............................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................AACTTCGAGGTGGGTGTGTGCTCTGC.............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
................................................................................................................................................................................AGTCGACGGCGAGCCTCCAG...............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCACCGATTGCACCG------AC....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................ACATA---AGCAGACGAACTTCGAGGTGGG.........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CACTCTA------------ATA---GCA-------G---------------------------------------------------TCCCCT----TGTTTT.....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGT----ACATA---AGCAGACGAACTTC.................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTG-------CCGG---G--ATTAAT-------CTCGAAATTGAA-A--------GAAAACTGAAAG------------GAAAAGTTTGCGGCGAGCCTCCAGTCATCGAATTC-CCC---------------ACT---------------TGAAATTATCAGTTCCAAACACTCGA------------CTA---A-----------------------------------CT------------------C-----TCCCGTACT-AT-TTTAT--------CC-CTCGAC-CCGTAGTTCTACGCCAATTTTAGCACCGACTGCACCG------AAG------ACAGC------AASizeHit CountTotal NormTotal
No Reads
droBia1
TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACCTCGAGGTGGGT-------------CGG---G--CAAAAT-------CGAGAAAATAGG-G--------GATAACTAAGAG------------GAAAAGTTGACGGCGAGCCTCCCGTCACCGAGACA-CCC---------------ACC---------------TGAACCTATCAGTTCCCAACACTCGA------------CTT---ATA-------G---------------------------------------------------AC-A------CC-CCTG-----------------T-TCCCAGTTCTACGCCAATTTCAGTACCGAGTGCACCG------ACAGC---AACACCAGCGACACSizeHit CountTotal NormTotal
No Reads
droTak1
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATCAGCAGCAGACGAACTACGAGGTGGGTGTGTT-------TTAGAGCA--ATCTCCTCCGAATT---AAA-GGAG-G--------AAAATC--AAAG------------GAAAAGTGGGTGACGAGCCTCCATTCA----------------------------CT---------------TGAAATTATCAGTTCCAAACATTCGA------------CTTATAGA--------G---------------------------------------------------ACCCCT----AT-TTCGT---A----TC-GCCTAT-CCCCAGTTCTACGCCAATTTCAGTACCGATTGCAGCG------ACAGCAACAACAGC---AATAGSizeHit CountTotal NormTotal
No Reads
droEle1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAGCTTCGAGGTGGGTGTGTG-------CCGG--TA--ATTTCT-------CCTGAAATTTGGCC--------AATTACTAAACG------------GAAAAGTTAACGGCGAGCCTCCAGTCA----------------------------CT---------------CGAAATTACCAGTTTCAAACACTCGA------------CTT---A-----------------------------------CT------------------T-----TCCACT----ATTTTACA--------CC-CCCGACTTTGCAGTTCTACGCCAATTTCAGCACCGATTGTAAC---ACCGACAAC---AACAGC------AASizeHit CountTotal NormTotal
No Reads
droRho1
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTG-------CCGG--TA--ATTTCT-------CTCGAAATTAGG-C--------AAAAATGAAAAG------------GAAAAGTTAACGGCGAGCCTCCATTCATCGAATCTCCCC---------------ACT---------------TAAAATTATCAGTTCCAAACACTCAA------------CTA---A-----------------------------------CT------------------T-----TACT------AC-TTTAT--------CC-CTCGACCTCGCAGTTCTACGCCAATTTCAGCACCGACTGTATCG------ACAAC---AACAGC---AAC-ASizeHit CountTotal NormTotal
No Reads
droFic1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGGACTTCGAGGTGGGTGTGTG-------CCGG--CG--ATCTCT-------CCGGAAATTCAG-G--------AAAACCTGAAAG------------AAAAAGTGACCGGCAAGCCTCCTGTCACCAAATTA-CCC----------------CT---------------TGAGCTTACCGGCTCGGAACTCTCCA------------CCA---GTCACTGATAAACTAA--------------------CC----------------------AAT----------------------------CCCGAT-CCGCAGTTCTACGCCAATTTCAGCACCGATTGCATCG------ACACCAACAACATGAGC----GSizeHit CountTotal NormTotal
No Reads
droKik1
TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAGAAGAAGGTTAGT----ACATCATCAGCAGACGGACTTCGAGGTGGGTGTGTG-------CCGGGCCGTGCCTGGC-------CGG-GATTTCAG-GGG------ACTTTCT--GGC------------CCAAAGTTGGCTGCGAGTCTCCAGTCATT-------------------------------------------CGTAGC--------------------------------------------------CCAACAGTTCCAGACCCAAACTCACT------------------T-----TC-A------TC-CGTATCT------TC-TC-----CGGCAGTTCTTTGCCAATTTCAGCACCGAAAACATCATCACCGCCAGC---AACAGC------AASizeHit CountTotal NormTotal
No Reads
droAna3
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----ACA------GCAGA----CTTCGAGGTGGGTGTGTG-------CCGG---A--ATCTCT-------AACAA-----------------AAAATT---ATT------------AAAAAGTTGACTAGGATTTATCTATCAAA---TTA---------------------T---------------AAAAATTATTTGTTTTACTCACTTGACCTGGCTACCAACTA---A-----------------------------------CT------------------CGTCAACCTCTT----C---ACCTTTA--------TC-----CGGCAGTTTTACGCCAATTTCAGTACCGACTGCAACG------AGAGC---AACATGAGCGGC--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCAACG------AGAGC---AACATGAGC.....2414.004020011
........................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGACTGCAACG------AGAGC---..............2014.004000013
........................................................................GA----CTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................1813.003000003
............................................................................................................................................................................................................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACT..................................2112.002020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CAACG------AGAGC---AACATGAGC.....1912.002010010
..........................................................................................................................................................................................................................................................................................................................................................................................................TTACGCCAATTTCAGTACCGACTGC................................2512.002110000
......................................................................................................................................................................................................................................................................TCACTTGACCTGGCTACCAACT.......................................................................................................................................................................2212.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTGCAACG------AGAGC---AAC...........2412.002000020
........................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGACTGCAACG------AGAGC---AACA..........2412.002100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................AACG------AGAGC---AACATGAGC.....1812.002011000
............................................................................................................................................................................................................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACTGC................................2311.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTACCGACTGCAACG------AGAGC---AAC...........2611.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTACCGACTGCAACG------AGA...................2411.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................TACGCCAATTTCAGTACCGACTGCAA..............................2611.001010000
........................................................................GA----CTTCGAGGTGGGTGTGTG-------CCG.........................................................................................................................................................................................................................................................................................................................................................2311.001000010
......................................................GT----ACA------GCAGA----CTTCGAGGTGGG.........................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.................................................GGTTAGT----ACA------GCAGA----CTTCGA...............................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CAACG------AGAGC---AACATGAGCGGC--2211.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTACCGACTGCAACG------AGA...................2211.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTACCGACTGCAACG------AGAGC---AACA..........2811.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGACTGCAACG------AGAGC---AAC...........2311.001000010
......................................................................CAGA----CTTCGAGGTGGGTGTGTG-------............................................................................................................................................................................................................................................................................................................................................................2211.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................CAACG------AGAGC---AACATGAGCG....2011.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACTGCAAC.............................2611.001100000
.........TTTTCAAGTGCCAGTGGAAGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACCGACTGCAACG------AGAGC---..............1911.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTGCAACG------AGAGC---..............2111.001010000
................................................AGGTTAGT----ACA------GCAGA----CTTCG................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTGCAACG------AGAGC---AACATG........2711.001000001
.........................................................................A----CTTCGAGGTGGGTGTGTG-------............................................................................................................................................................................................................................................................................................................................................................1911.001000001
......................................................................CAGA----CTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.......................................................................................................................................................................................................................................................................................CAACTA---A-----------------------------------CT------------------CGTCAACCTCTT----...........................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................AGTTTTACGCCAATTTCAGTACCGA....................................2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTACGCCAATTTCAGTACCGACT..................................2411.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACG------AGAGC---AACATGAGCG....1811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGCCAATTTCAGTACCGACTGCAA..............................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTGCAACG------AGAGC---AACA..........2511.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAACG------AGAGC---AACATGAGC.....2311.001000010
.................................ATGAAGGTCAGAAGAAGGTTAGT----AC.....................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACCGACTGCAACG------AGAGC---AACATG........2511.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTACCGACTGCAACG------AGAGC---..............2411.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGTACCGACTGCAACG------AGAGC---..............2211.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACCGACTGCAACG------AGAGC---AACATG........2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTACCGACTGCAACG------AGAGC---..............2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CG------AGAGC---AACATGAGCGGC--1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACG------AGAGC---AACATGAGCGGC--2411.001000010
.........................................................................................................................................................................................................................................................................CTTGACCTGGCTACCAACTA---A-----------------------------------CT------------------CG.........................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACCGACTGCAACG------AGAGC---AACATGAGC.....2711.001000010
.....................................................................GCAGA----CTTCGAGGTGGGT........................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACG------AGAGC---AACATGAGC.....2011.001000010
.................................................GGTTAGT----ACA------GCAGA----CTTCG................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..................................................................................................................................................................................................................................................................TTACTCACTTGACCTGGCTACCAA.........................................................................................................................................................................2411.001010000
droBip1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----A-------AGCAGA----CTTCGAGGTGGGTGTGTG-------CCGG---A--ATCTCT-------AACAA------------------AAATT---ATT-AATTAAATAAGAAAAAGTTGACGGGGAGTTTTCAATCATT-----C-CCC---------------A------------------AAAATTATTAGTCTTACACACTTGACCTGGCAACCGACTA---A-----------------------------------CT------------------CGCCAACCTCTT----T---ACCTTTTT--------C-----CGGCAGTTTTACGCCAATTTCAGCACCGACTGCAACG------AGAGC-----------------SizeHit CountTotal NormTotal
No Reads
dp5
TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---TC-----------------------------------------------TT-------AGCGAAATTG--------------TAAGTAAAAG------------AAAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCA----------------ACA-CTGCCCGTATCGAAATTACC-GTTTTCAACATCTAA------------CTA---A-----------------------------------CT------------------------TACT------CT-TGCATTCTTGC--GGACCCGGC-CTGAAGCTCTACGCAAACTTCAGCACAAAC---------------------------------AGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................CGCCCGTCG---------GAAGGTCAGAAGAAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000121
................GCGCCCGTCG---------GAAGGTCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.................................................................................................................................................................................................................................................................TTTCAACATCTAA------------CTA---A-----------------------------------CT------------------------TACT------CT-........................................................................................2512.0020000000200
..............................................................................................................................................................................................................................................................................................................................................................................ATTCTTGC--GGACCCGGC-CTGAAG...........................................................2311.0010100000000
..............................................................................................................................................................................AAAGTTGACGGCGAATTTCTAAT..............................................................................................................................................................................................................................................................2311.0010000000010
..........................................................................................................................................................................................................................................................................CTAA------------CTA---A-----------------------------------CT------------------------TACT------CT-TGCAT...................................................................................2111.0010100000000
..........................................AGAAGAAGGTTAGC----AAACT---T..............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................................ATTCTTGC--GGACCCGGC-CTG..............................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CTACGCAAACTTCAGCACAAAC---------------------------------..2211.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................CTCTACGCAAACTTCAGCACAAAC---------------------------------..2411.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................TGCATTCTTGC--GGACCCGGC-CT...............................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................TGCATTCTTGC--GGACCCGGC-CTGAAGCC.........................................................2811.0010001000000
...............AGCGCCCGTCG---------GAAGGTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
.................................................................................................................................................................................................................................................................................................................................................................................CTTGC--GGACCCGGC-CTGAAGCTC........................................................2311.0010001000000
..............................................................................................................................................................................................................T-CTTTCA----------------ACA-CTGCCCGTATC..............................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................ACT------CT-TGCATTCTTGC--GGACC......................................................................2111.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AAGCTCTACGCAAACTTCAG..........................................2011.0010100000000
.................CGCCCGTCG---------GAAGGTCAGAAGAAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000100
...............AGCGCCCGTCG---------GAAGGTCAGAAGAAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000010
................GCGCCCGTCG---------GAAGGTCAGAAGAAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000010
........................CG---------GAAGGTCAGAAGAAGGTTAG............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............................................................................................................................................................................................................................................CCCGTATCGAAATTACC-GT..................................................................................................................................................................................................1911.0010000010000
......................................................................................................................................................................................................................................................................................................................................................................................................AGCTCTACGCAAACTTCAGC.........................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................C--GGACCCGGC-CTGAAGCTCTAC.....................................................2211.0010100000000
................GCGCCCGTCG---------GAAGGTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000000
...........................................................................................................................................................................................................................................................................................................................................................................TGCATTCTTGC--GGACCCGGC-.................................................................2011.0010100000000
.........................G---------GAAGGTCAGAAGAAGGTTAGC----.......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
.................................................................................................................................................................................................................................................................................................................................................................................CTTGC--GGACCCGGC-CTGAAGCTCC.......................................................2411.0010001000000
.................CGCCCGTCG---------GAAGGTCAGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................C-CTGAAGCTCTACGCAAACT..............................................2011.0010100000000
droPer2
TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---TC-----------------------------------------------TT-------AGCGAAATTG--------------TAAGTAAAAG------------AAAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCA----------------ACA-CTGCCCGTATCGAAATTACC-GTTTTCAACATCTAA------------CTA---A-----------------------------------CT------------------------TACT------CT-TGCATTCTTGC--GGACCCGGC-CTGAAGCTCTACGCAAACTTCAGCACAGACAG---------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................CT-TGCATTCTTGC--GGACCCGGC-CTGG.............................................................2612.002200000
...........................................................................................................................................................................................................................................................................................TA---A-----------------------------------CT------------------------TACT------CT-TGCATTCTTG..............................................................................2111.001010000
.........................................CAGAAGAAGGTTAGC----AAACT---T..............................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
........................................................................................................................................................................................................................................................ATTACC-GTTTTCAACATCTAA------------CTA---...................................................................................................................................................................2411.001010000
..............AAGCGCCCGTCG---------GAAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
............................................AAGAAGGTTAGC----AAACT---T..............................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
........................................................................................................................................................................................................................................................................................................................................................................CT-TGCATTCTTGC--GGACCCGGC-CTGA.............................................................2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................................CTTGC--GGACCCGGC-CTGAAG...........................................................2011.001010000
..................................................................................................................................................................................................................................................................................................................................................................................TTGC--GGACCCGGC-CTGAAGCT.........................................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................C--GGACCCGGC-CTGAAGCTCTACGCAAAC...............................................2811.001010000
..................................................................................................................................................................................................................................................................................................................................................................................TTGC--GGACCCGGC-CTGAAGCTCTAC.....................................................2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................ATTCTTGC--GGACCCGGC-CTGAAGCT.........................................................2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................CT-TGCATTCTTGC--GGACCCGGC-.................................................................2211.001010000
.................CGCCCGTCG---------GAAGGTCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................GTAAAAG------------AAAAAGTTGACG...........................................................................................................................................................................................................................................................................1911.001100000
droWil2
TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGT----ACATC---AGTAGATTGCATTCGAGGTGGGTGTGTT-------T-----------------------GCGAAA----------------------------------------------TAGCGGCGATTTTTCTATCAAATCTATC-TAT--ATCTGTGCACATA--TAACAATTGCT--TATCAAAATTTCCAGTAATTGGAGTTTAA------------CTA---T-----------------------------------AT------------------T-----TCCT------TT-CTTATTTTTC---CG-GCCGGC-AAATAGTTTTACGCAGACTTCAGTACAGACA------------------------AC------AGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................CATC---AGTAGATTGCATTCGA...............................................................................................................................................................................................................................................................................................................................................................................2015.00500050
..............................................................ATC---AGTAGATTGCATTCGA...............................................................................................................................................................................................................................................................................................................................................................................1914.00400040
............................................................ACATC---AGTAGATTGCATTCGA...............................................................................................................................................................................................................................................................................................................................................................................2114.00410030
..............................................................ATC---AGTAGATTGCATTCGAG..............................................................................................................................................................................................................................................................................................................................................................................2013.00303000
...........................................................................................................................................................................................................................................................................................................................................................................................................TACGCAGACTTCAGTACAGAC...................................2112.00220000
.......................................................................AGATTGCATTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2312.00201001
.............................................................................................GTT-------T-----------------------GCGAAA----------------------------------------------TAGCGGCG........................................................................................................................................................................................................................................................................1812.00220000
.............................................................CATC---AGTAGATTGCATTCGAG..............................................................................................................................................................................................................................................................................................................................................................................2112.00202000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACAGAC...................................2212.00210010
................................................................C---AGTAGATTGCATTCGAGT.............................................................................................................................................................................................................................................................................................................................................................................1912.00200020
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTACAGAC...................................2312.00210010
....................................................................AGTAGATTGCATTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2611.00100001
..............................................................ATC---AGTAGATTGCATTCG................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............................................................................GCATTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.............................................................CATC---AGTAGATTGCATTCGAGT.............................................................................................................................................................................................................................................................................................................................................................................2211.00100010
................................................................................TCGAGGTGGGTGTGTT-------T-----------------------GCGA................................................................................................................................................................................................................................................................................................................................2111.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTTACGCAGACTTCAGTAC.......................................2111.00100010
...............................................................................TTCGAGGTGGGTGTGTT-------T-----------------------GCGAAA----------------------------------------------TAGC............................................................................................................................................................................................................................................................................2811.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................TACGCAGACTTCAGTACAGACA------------------------AC------..2411.00101000
............................................................................................................................................................................................................ATC-TAT--ATCTGTGCACATA--TAAC...........................................................................................................................................................................................................................2311.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTAC.......................................1911.00110000
.....................................................................................GTGGGTGTGTT-------T-----------------------GCGAAA----------------------------------------------TAGC............................................................................................................................................................................................................................................................................2211.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................CGCAGACTTCAGTACAGA....................................1811.00100010
...................................................................................AGGTGGGTGTGTT-------T-----------------------GCGAAA----------------------------------------------TAGCG...........................................................................................................................................................................................................................................................................2511.00100001
..........................................................................TTGCATTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACA......................................1911.00100010
......................................................................................TGGGTGTGTT-------T-----------------------GCGAAA----------------------------------------------TAGC............................................................................................................................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................TACGCAGACTTCAGTACAGACA------------------------AC------A.2511.00110000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTACAGA....................................2211.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACAGACA------------------------AC------A.2611.00100010
.........................................................................ATTGCATTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.........................................................................ATTGCATTCGAGGTGGGTGTGT....................................................................................................................................................................................................................................................................................................................................................................2211.00101000
....................................................................AGTAGATTGCATTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................2411.00100001
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTACAGACA------------------------AC------A.2711.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................GACTTCAGTACAGACA------------------------AC------AG2011.00100010
.................................................................................CGAGGTGGGTGTGTT-------T-----------------------GCGAAA----------------------------------------------TAGC............................................................................................................................................................................................................................................................................2611.00100010
droVir3
TTCCTAAGCTTTTCAAGTGCCAATGGAAGACGTATGAAGGTCAGAAGAAGGTTAGT----ACATC---GTTTCATTACGTTCGAGGTGGGTGTGTT-------TAGG-CCA--------------------A-----G-T--AAAACCAAAATTAAAGCA------AATAAATCATTTTTTACGGCGATTTATCAATCAAA--ATTT-TGC---------------ATT------TAGT--TAACAAAATTATCAATTTGTAGCAGCTAA------------ATT---A-----------------------------------AT------------------G-----TTTGGT-----------TTTTTCCACAC-TCCGGC-GTGCAGCTTTACGCGAATTTCAGTGCAGACTCCGTT---------------------------AASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................ACGTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................1812.002000000000010000000000000000000000000001000000000000000000000000
....................................................................GTTTCATTACGTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................2412.002020000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ACGCGAATTTCAGTGCAGACTCCGTT---------------------------..2612.002000000000000000000000000000000000000000000000000000000000000002
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCAGACTCCGTT---------------------------A.1912.002000000000000000002000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ACGCGAATTTCAGTGCAGACTCCGT..............................2512.002000000000000000000000000000000000000000000000000000000000000002
...................................................................................................................................................................................................................................................................................................................................................................................TCCACAC-TCCGGC-GTGCAG...........................................................1912.002000000000000000001000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGCGAATTTCAGTGCAGACTCCGT..............................2412.002000000000000000001010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTCCGTT---------------------------AA2112.002000000000000000001100000000000000000000000000000000000000000000
..........................................................................TTACGTTCGAGGTGGGTG.......................................................................................................................................................................................................................................................................................................................................................................1812.002000001000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GCTTTACGCGAATTTCAGT.........................................1911.001000000000000000001000000000000000000000000000000000000000000000
...............................GTATGAAGGTCAGAAGAAGC................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCAGACTCCGTT---------------------------..1811.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................................................................................................................................................................................................................................................................TTCCACAC-TCCGGC-GTGCA............................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................GTGTGTT-------TAGG-CCA--------------------A-----G-T--AAA..................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................ATCATTTTTTACGGCGATTTAT..................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................ATTACGTTCGAGGTGGGTGTGTT-------TA..........................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
......................................................................TTCATTACGTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GCTTTACGCGAATTTCAGTGCAGA....................................2411.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTCCGTT---------------------------..1911.001000000000000000001000000000000000000000000000000000000000000000
............................................................................ACGTTCGAGGTGGGTGTGTT-------............................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GCTTTACGCGAATTTCAGTGCA......................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................TACGTTCGAGGTGGGTGT......................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
................................................................................TCGAGGTGGGTGTGTT-------TAG.........................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTACGCGAATTTCAGTGCA......................................1911.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTCCGT..............................1911.001000000000000000000000000000000000000000000000000000000000001000
.....................AATGGAAGACGTATGAAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTCCGTT---------------------------AA2211.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AATTTCAGTGCAGACTCCGT..............................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................GTGGGTGTGTT-------TAGG-CCA--------------------A-----G-T--AAAACC...............................................................................................................................................................................................................................................................................................................2711.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................ATTACGTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTCCGTT---------------------------..2011.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTCAGTGCAGACTCCGTT---------------------------AA2411.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTCCGTT---------------------------C.2011.001000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................A------AATAAATCATTTTTTACGGCGAT......................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AGCTTTACGCGAATTTCAGTGCA......................................2311.001000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTCAGTGCAGACTCCGT..............................2111.001000000000000000000000100000000000000000000000000000000000000000
..........................................................................TTACGTTCGAGGTGGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTACGCGAATTTCAGTGCA......................................2011.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................TTTCATTACGTTCGAGGTGGGTGT......................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTCCGTT---------------------------A.2111.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GT--TAACAAAATTATCAATTTGTAGCAGCT.......................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
............................................................ACATC---GTTTCATTACGTTCGAGGTGGG.........................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AGCTTTACGCGAATTTCAGTG........................................2111.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CTTTACGCGAATTTCAGTGCAGACT..................................2511.001000000000000000000010000000000000000000000000000000000000000000
...............................................................TC---GTTTCATTACGTTCGAG..............................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ACGCGAATTTCAGTGCAGACTCCGTT---------------------------A.2711.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACATTCGAGGTGGGTCTCTG-------TCGT-CCG--TTTAAA-------TACGAAT----------------AAAAGTAAAAGT-----------GAACTTTTCCCGGCGATTTATTAATCAAAATT--T-T--------------------AGCATTTAC------------------TACCTAACACTCAA------------A-------------------------------------ATTTCTCTTATCCAATATTTTAATG-----TTTGAT---ATCTCTTAC--------TT-TCCGGC-GTGCAGCTCTACGCGAACTTCTCCAAAGAC---ACCG------TCAGC---AACATG------AGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................ACATTCGAGGTGGGTCTCTG-------TC..........................................................................................................................................................................................................................................................................................................................................................2212.002000002
........................................................................GATTACATTCGAGGTGGGT........................................................................................................................................................................................................................................................................................................................................................................1912.002100001
..............................................................................ATTCGAGGTGGGTCTCTG-------............................................................................................................................................................................................................................................................................................................................................................1812.002001100
..............................................................................ATTCGAGGTGGGTCTCTG-------TCGT-CCG--..................................................................................................................................................................................................................................................................................................................................................2511.001000100
.........................................................................ATTACATTCGAGGTGGGTCTCT....................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................GATTACATTCGAGGTGGGTCT......................................................................................................................................................................................................................................................................................................................................................................2111.001000100
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCCAAAGAC---ACCG------TCAGC---..............2111.001000001
......................................................................TTGATTACATTCGAGGTGGGT........................................................................................................................................................................................................................................................................................................................................................................2111.001000100
................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTCTCCAAAGAC---ACCG------......................2011.001000001
........................................................................................................................................................................................................................................................................................................................................................................................TT-TCCGGC-GTGCAGCTCTACGC...................................................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................AT---ATCTCTTAC--------TT-TCCGGC-GTGC.............................................................2311.001000010
...........................................................................TACATTCGAGGTGGGTCTCTG-------T...........................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................GATTACATTCGAGGTGGGTCTC.....................................................................................................................................................................................................................................................................................................................................................................2211.001000010
............................................................................ACATTCGAGGTGGGTCTCTG-------............................................................................................................................................................................................................................................................................................................................................................2011.001001000
..........................................................................TTACATTCGAGGTGGGTCTCTG-------TC..........................................................................................................................................................................................................................................................................................................................................................2411.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAAGAC---ACCG------TCAGC---A.............1911.001100000
.........................................................AGTACATC---ATTTGATTACATTCGAG..............................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAC---ACCG------TCAGC---AACA..........2011.001100000
..............................................................................ATTCGAGGTGGGTCTCTG-------T...........................................................................................................................................................................................................................................................................................................................................................1911.001010000
............................................................ACATC---ATTTGATTACATTCGAG..............................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................ATTACATTCGAGGTGGGTCTCTG-------T...........................................................................................................................................................................................................................................................................................................................................................2411.001001000
droGri2
TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACGCTCGAGGTGGGTGCGTTTTTT-----------------TC-------AGC-AA----------------ATAAAGTAAAAGC-----------AAAAATCAAGCGACGATTCATCAATCAAAACCTTT-TGC---------------ATA------TACT-----TAACAACATTATTATT------------------------A---A-----------------------------------CT------------------T-----TAAT-----ATATTCTGT--------TT-TGCGGT-GTGCAGCTCTTTGCGAATTTCAACACAGACTCA------------------------------AASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................CGAATTTCAACACAGACTCA------------------------------AA2211.00110
..............................................................ATC---ATTTGATTACGCTCGAG..............................................................................................................................................................................................................................................................................................................................................................................2011.00101
...............................................................................................................................................................................................................................................................................................................................................................................................................CGAATTTCAACACAGACTCA------------------------------..2011.00110
.......................................................................................................................................................................................................................................................................................................................................................................................................GCTCTTTGCGAATTTCAACAC.......................................2111.00101

Generated: 05/18/2015 at 12:11 AM