ID:

dya_1100

 Coordinate:

3R:20416205-20416355 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.9 -22.8 -22.8 -22.7

Flybase annnotation

exon [dyak_GLEANR_7679:4]; CDS [Dyak\GE23936-cds]; intron [Dyak\GE23936-in]

Repeatable elements

NameClassFamilyStrand
Gypsy6A_LTRLTRGypsy-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTCAAAATGTGATCTATTAGTTAAATACGCCGACTGGGAAGAGGAACAAGGTATGGTATTAACTGGAAATGTCTTAAGAGGTAACAATATCCTTACATATAAGTTAACACAAGCCAACGAACTAGAACAGTTGGCTCAGTGTGCGAAATATAATAAAAGTGCTGACCCAGCATTGGGCCGGAAACCCGTGCGCAGCCGGCAAACACAGCATATTTGCGTGGCCGCTGCGAGTCTTTGTTAGCTTTAAGTTT
****************************************************************...((((.((.....((((........(((...((((.....((((.(((((((...........)))))))..))))......))))....))))))).....))))))***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M056
embryo
 M043
female body
 GSM1528802
follicle cells		 V120
male body		 V058
head
 M026
head
 V046
embryo
 V052
head
....................................................................................................................................................TATAATAAAAGTGCTGACCCAGCATT............................................................................. 26 0 1 12.00 12 7 5 0 0 0 0 0 0
.........................................................................................................................................................TAAAAGTGCTGACCCAGCATTGGGCC........................................................................ 26 0 20 4.40 88 75 12 0 0 0 1 0 0
......................................................................................................................................................TAATAAAAGTGCTGACCCAGCATTGGGCC........................................................................ 29 0 1 4.00 4 4 0 0 0 0 0 0 0
........GTGATCTATTAGTTAAATACGCCGAC......................................................................................................................................................................................................................... 26 0 1 4.00 4 0 0 4 0 0 0 0 0
.............................................................................................................................................TTCGAAATATAATAAAAGTGCTGACCC................................................................................... 27 1 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................ATAATAAAAGTGCTGACCCAGCATT............................................................................. 25 0 1 2.00 2 0 2 0 0 0 0 0 0
......................................................................................................................................................TAATAAAAGTGCTGACCCAGCATT............................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0
.......................................................................................................................AACTAGAACAGTTGGCTCAGTGTGCGA......................................................................................................... 27 0 20 1.65 33 0 0 33 0 0 0 0 0
........................................................................................................................................................ATAAAAGTGCTGACCCAGCATTGGGCC........................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................TATAATAAAAGTGCTGACCCAGCAT.............................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................ACTGTCTTAAGAGGTAACAAT................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0
......................................................................................................................................................TAATAAAAGTGCTGACCCAGCATTGGGAC........................................................................ 29 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................AATAAAAGTGCTGACCCAGCATT............................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................GGAAATGTCTTAAGAGGT......................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0
.......................................................................................................................................................AATAAAAGTGCTGACCCAGCATTGGGCC........................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................TGCGAAATATAATAAAAGTGCTGACCC................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................................................TATTATAAAAGTGCTGACCCAGCATT............................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................TACAATAAAAGTGCTGACCCAGCATT............................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0
..............................CGACTGGGAAGAGGAACAAG......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0
.....................................................................................................................CGAACTAGAACAGTTGGCTCAGT............................................................................................................... 23 0 20 0.85 17 0 16 0 0 0 1 0 0
.....................................................................................................................CGAACTAGAACAGTTGGCTCAGTG.............................................................................................................. 24 0 20 0.75 15 0 15 0 0 0 0 0 0
..................................................................................................................................................................................................GCCGGCAAACACAGCATATTTGCGTG............................... 26 0 20 0.55 11 0 0 11 0 0 0 0 0
..........................................................................................................................TAGAACAGTTGGCTCAGTGTGCGA......................................................................................................... 24 0 20 0.50 10 0 0 10 0 0 0 0 0
.....................................................................................................................CGAACTAGAACAGTTGGCTCAGTGTG............................................................................................................ 26 0 20 0.40 8 0 8 0 0 0 0 0 0
.......................................................................................................................AACTAGAACAGTTGGCTCAGTGTGC........................................................................................................... 25 0 20 0.35 7 2 5 0 0 0 0 0 0
...................................................................................................................................................................................................CCGGCAAACACAGCATATTTGCGT................................ 24 0 20 0.30 6 0 6 0 0 0 0 0 0
....................................................................................................................ACGAACTAGAACAGTTGGCTCAGTG.............................................................................................................. 25 0 20 0.30 6 1 5 0 0 0 0 0 0
.....................................................................................................................CGAACTAGAACAGTTGGCTCAGTGT............................................................................................................. 25 0 20 0.25 5 0 5 0 0 0 0 0 0
.........................................................................................................................................................TAAAAGTGCTGACCCAGCATTGGGC......................................................................... 25 0 20 0.20 4 1 3 0 0 0 0 0 0
.............................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCGGCA.................................................. 28 0 20 0.15 3 1 2 0 0 0 0 0 0
..........................................................................................................................TAGAACACTTGGCTCAGTGTGCGAAAT...................................................................................................... 27 1 20 0.15 3 0 0 3 0 0 0 0 0
.........................................................................................................................................................TGAAAGTGCTGACCCAGCATTGGGCC........................................................................ 26 1 20 0.15 3 3 0 0 0 0 0 0 0
............................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCCG..................................................... 26 0 20 0.15 3 0 2 0 0 0 0 1 0
.....................................................................................................................CGAACTAGAACAGTTGGCTCAG................................................................................................................ 22 0 20 0.15 3 0 2 0 1 0 0 0 0
.................................................................................................................................................................................................AGCCGGCAAACACAGCATATTTGCGT................................ 26 0 20 0.15 3 0 3 0 0 0 0 0 0
.............................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCG..................................................... 25 0 20 0.15 3 2 1 0 0 0 0 0 0
.......................................................................................................................AACTAGAACAGTTGGCTCAGTGTG............................................................................................................ 24 0 20 0.15 3 1 2 0 0 0 0 0 0
....................................................................................................................ACGAACTAGAACAGTTGGCTCAGT............................................................................................................... 24 0 20 0.15 3 0 2 0 1 0 0 0 0
..................................................................................................................CAACGAACTAGAACAGTTGGCT................................................................................................................... 22 0 20 0.10 2 0 1 0 0 0 0 1 0
..........................................................................................................................TAGAACAGTTGGCTCAGTGTGCGAAA....................................................................................................... 26 0 20 0.10 2 0 2 0 0 0 0 0 0
........................................................................................................................ACTAGAACAGTTGGCTCAGT............................................................................................................... 20 0 20 0.10 2 0 0 0 2 0 0 0 0
.....................................................................................................................CGAACTAGAACAGTTGGCTCAGC............................................................................................................... 23 1 20 0.10 2 1 0 0 0 0 1 0 0
..........................................................................................................................TAGAACAGTTGGCTCAGTGGGCGA......................................................................................................... 24 1 20 0.10 2 0 0 2 0 0 0 0 0
.......................................................................................................................AACTAGAACAGTTGGCTCAGTGTGCGT......................................................................................................... 27 1 20 0.10 2 0 2 0 0 0 0 0 0
...........................................................................................................................................................AAAGTGCTGACCCAGCATTGGGCCGG...................................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0 0
...................................................................................................................AACGAACTAGAACAGTTGGCT................................................................................................................... 21 0 20 0.10 2 0 0 0 0 1 1 0 0
........................................................................................................TAACACAAGCCAACGAACTAGAACAGT........................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ACACAGCATATTTGCGTGGCCGC.......................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0
......................................................................................................................GAACTAGAACAGTTGGCTCAGTGTCA........................................................................................................... 26 2 20 0.10 2 0 2 0 0 0 0 0 0
.......................................................................................................................AACTAGAACAGTTGGCTCAGTGT............................................................................................................. 23 0 20 0.10 2 0 2 0 0 0 0 0 0
........................................................................................................................ACTAGAACAGTTGGCTCAGTGTG............................................................................................................ 23 0 20 0.10 2 0 2 0 0 0 0 0 0
............................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCC...................................................... 25 0 20 0.10 2 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTTGCGTGGCCGCTGCGAGTCTTTG.............. 25 0 20 0.10 2 0 2 0 0 0 0 0 0
...................................................................................................................................................................................................................................CGAGTCTTTGTTAGCTTTAAGTTT 24 0 13 0.08 1 0 1 0 0 0 0 0 0
...................GTTAGATCCGCCAACTGGG..................................................................................................................................................................................................................... 19 3 15 0.07 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGGCCGCTGCGAGTCTTTGTTAGCTT....... 26 0 20 0.05 1 0 1 0 0 0 0 0 0
.............................................................................................................................AACAGTTGGCTCAGTGTGC........................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................CGGCGCAGCCGGCAAACACAGCATATTTG................................... 29 2 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ACACAGCATATTTGCGTGGCCGCT......................... 24 0 20 0.05 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGAC...................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................AAAAGTGATGACCCAGCATTGGGCC........................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................TAAAAGTGGTGACCCAGCATTGGGCC........................................................................ 26 1 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................CGAACTAGAACGGTTGGCTCAG................................................................................................................ 22 1 20 0.05 1 0 0 0 1 0 0 0 0
.........................................................................................................................................................TAAAAGTACTGACCCAGCATTCGGCC........................................................................ 26 2 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................AGAACAGTTGGCTCAGTGTGCGAAATAT.................................................................................................... 28 0 20 0.05 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCGGCT.................................................. 28 1 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................AACTTGAACAGTTGGCTCAGTGTGC........................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................AACTAGAAAAGTTGGCTCAGTGTG............................................................................................................ 24 1 20 0.05 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................CCGGCAAACACAGCATATTTGCG................................. 23 0 20 0.05 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................TAAAAGTGCTGACCCGGCATTGGGCC........................................................................ 26 1 20 0.05 1 0 1 0 0 0 0 0 0
................................................................................................................................AGTTGGCTCAGTGTGCGAAAT...................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0 0 0
.....................................................................................................................CGAACTAGTACAGTTGGCTCAGTG.............................................................................................................. 24 1 20 0.05 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................TAAAAGTGCTGACCAAGCATTGGGCC........................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................GCAGCCGGCAAACACAGCATATTTGCGT................................ 28 0 20 0.05 1 0 1 0 0 0 0 0 0
...................................................................................................................AACGAACTAGAACAGTTGGCTCAGT............................................................................................................... 25 0 20 0.05 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCTGC................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TATTTGCGTGGCCGCTGCGAGTCTTTG.............. 27 0 20 0.05 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................AGTGCTGACCCAGCATTGGGCC........................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................CTAGAACAGTTGGCTCAGTGTGC........................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................CTAACTAGAACAGTTGGCTCAGTGTGC........................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................TAAAAGTGCTAACCCAGCATTGGGCC........................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................TTGGCTCAGTGTGCGAAATATA................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................................CATTGGGCCGGAAACCCGTGCGCAGC....................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................TAAAAGTACTGACCCAGCATTGGGCC........................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................ACTAGAACAGTTGGCTCAGTGTGCG.......................................................................................................... 25 0 20 0.05 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................CGCAGCATTGGGCCGGAAACCCGTGC............................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TTGGCCGGAAACCCGTGCGCAGCC...................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................CGTGCGCAGCCGGCAACC............................................... 18 1 20 0.05 1 0 0 0 0 0 0 0 1
.........................................................................................................................................................TAAAAGGGCTGACCCAGCATTGGGCC........................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................CGAACTAGAACAGTTGGCTCAGTGTGCG.......................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0 0 0
......................................................................................................................GAACTAGAACAGTTGGCTCAGTG.............................................................................................................. 23 0 20 0.05 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................TAAAAGTGCTGACCCAGCATTGGGCCG....................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 1 0
..................................................................................................................................................................TGACCCAGCATTGGGCCGGAAACCCGTG............................................................. 28 0 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................CTAACTAGAACAGTTGGCTCAGGGTGC........................................................................................................... 27 2 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CGAGTCTTTGTTAGCTTTAAGTT. 23 0 20 0.05 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTTGCGTGGCCGCTGCGAGTCTTTGTT............ 27 0 20 0.05 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................TGGTCCGGAAACCCGTGCGCAGCCGGC................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................................................ACGAACTAGAACAGTTGGCTCA................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................GCAGCCGGCAAACACAGCATATTTGCG................................. 27 0 20 0.05 1 0 1 0 0 0 0 0 0
........................................................................................................................ACTAGAACAGTTGGCTCAGTGTGCGA......................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................CGAACTAGGACAGTTGGCTCAGTGTGC........................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................CAGTATTGGGCCGGAAACCCGTGC............................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCC...................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TGGGCCGGGAACCCGTGCGCAGCCGGCA.................................................. 28 1 20 0.05 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................TAAAAGTGCTGACCCAGCATTCGGCC........................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCGGC................................................... 27 0 20 0.05 1 0 1 0 0 0 0 0 0
......................................................................................................................GAACTAGAACAGTTGGCTCAGTGT............................................................................................................. 24 0 20 0.05 1 0 0 0 1 0 0 0 0
....................................................................................................................ACGAACTAGAACAGTTGGCTCAGTGTGC........................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0 0 0
..........................................................................................................................TAGAACAGTTGGCTCAGTGTGCGAA........................................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................ACACAGCATATTTGCGTGGCCGCTA........................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................TGACCCAGCATTGGGCCGGAAACCCG............................................................... 26 0 20 0.05 1 0 1 0 0 0 0 0 0
..................................................................................................................CAACGAACTAGAACAGTTGGCTCAGT............................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................TGGGCCGGAAACCCGTGCCCAGCC...................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................AAAGTGCTGACCCAGCATTGGGCC........................................................................ 24 0 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................CGAACTAGAACAGTTGGCTCAGTGTGC........................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................CGAACTAGAACAGTTGGCTCA................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................TGCTGACCCAGCATTGGGC......................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0
...............................................................................................................AGCCAACGAACTAGAACAGTTGGCT................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................ACCCGTGCGCAGCCGGCAAACACAGC.......................................... 26 0 20 0.05 1 0 1 0 0 0 0 0 0
..........................................................................................................................TAGAACAGTTGGCTCAGTGTG............................................................................................................ 21 0 20 0.05 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCCGGC................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

AAGTTTTACACTAGATAATCAATTTATGCGGCTGACCCTTCTCCTTGTTCCATACCATAATTGACCTTTACAGAATTCTCCATTGTTATAGGAATGTATATTCAATTGTGTTCGGTTGCTTGATCTTGTCAACCGAGTCACACGCTTTATATTATTTTCACGACTGGGTCGTAACCCGGCCTTTGGGCACGCGTCGGCCGTTTGTGTCGTATAAACGCACCGGCGACGCTCAGAAACAATCGAAATTCAAA
*****************************************************************************...((((.((.....((((........(((...((((.....((((.(((((((...........)))))))..))))......))))....))))))).....))))))**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M043
female body
 GSM1528802
follicle cells		 M056
embryo
 V120
male body		 V046
embryo
 V052
head
 M026
head
 V058
head
 SRR1275484
Male prepupae
....................................................................................................................................................................................................................AAACGCACCGGCGACGCTCAGAAAC.............. 25 0 20 7.70 154 144 3 6 0 0 0 0 0 1
......................................................................................................CAATTGTGTTCGGTTGCTTGATCTT............................................................................................................................ 25 0 20 5.60 112 77 16 14 5 0 0 0 0 0
.........................................................................................................................................................................................GGCACGCGTCGGCCGTTTGTGTCGT......................................... 25 0 20 5.10 102 11 91 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCCGGCCTTTGGGCAC............................................................. 27 0 20 4.65 93 2 91 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGATCTT............................................................................................................................ 26 0 20 4.00 80 52 0 22 5 0 0 1 0 0
..................................................................................................................................................................................GCCTTTGGGCACGCGTCGGCCGTTT................................................ 25 0 20 3.65 73 0 73 0 0 0 0 0 0 0
.........................................................................................................................................................................................AGCACGCGTCGGCCGTTTGTGTCGTAT....................................... 27 1 20 3.50 70 0 70 0 0 0 0 0 0 0
......................................................................................................................................................................................TTGGGCACGCGTCGGCCGTTTGTGT............................................ 25 0 20 3.10 62 0 62 0 0 0 0 0 0 0
............................................................................................................................................................................................ACGCGTCGGCCGTTTGTGTCGTAT....................................... 24 0 20 3.05 61 61 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATAAACGCACCGGCGACGCTCAGAAAC.............. 27 0 20 3.05 61 35 26 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGCGACGCTCAGAAACAATCGAAAT..... 26 0 20 2.55 51 49 0 2 0 0 0 0 0 0
...............................................................................................................................................................................CCGGCCTTTGGGCACGCGTCGGCCGT.................................................. 26 0 20 2.25 45 0 41 4 0 0 0 0 0 0
..........................................................................................................TGTGTTCGGTTGCTTGATCTTGTCAA....................................................................................................................... 26 0 20 1.55 31 3 28 0 0 0 0 0 0 0
..........................................................................................................TGTGTTCGGTTGCTTGATCTTGTCAAC...................................................................................................................... 27 0 20 1.50 30 1 29 0 0 0 0 0 0 0
.......................................................................................................................................................................................TGGGCACGCGTCGGCCGTTTGTGT............................................ 24 0 20 1.50 30 14 15 1 0 0 0 0 0 0
............................................................................................................................CTTGTCAACCGAGTCACACGCTTTAT..................................................................................................... 26 0 20 1.45 29 16 13 0 0 0 0 0 0 0
.................................GACCCTCCTAGTTGTTCCAT...................................................................................................................................................................................................... 20 3 7 1.43 10 0 10 0 0 0 0 0 0 0
...................................................................................................................................................................................CCTTTGGGCACGCGTCGGCCGTTTGT.............................................. 26 0 20 1.40 28 28 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ACGCACCGGCGACGCTCAGAAACAAT........... 26 0 20 1.35 27 21 6 0 0 0 0 0 0 0
...........................................................................................................................................................................................CACGCGTCGGCCGTTTGTGTCGTAT....................................... 25 0 20 1.30 26 0 26 0 0 0 0 0 0 0
......................................................................................................CAATTGTGTTCGGTTGCTTGATCTTGT.......................................................................................................................... 27 0 20 1.20 24 22 0 2 0 0 0 0 0 0
.........................................................................................................................GATCTTGTCAACCGAGTCACACGCTT........................................................................................................ 26 0 20 1.10 22 7 15 0 0 0 0 0 0 0
.......................................................................................................................................................................................TGGGCACGCGTCGGCCGTTTGTGTCGTAT....................................... 29 0 20 1.05 21 0 21 0 0 0 0 0 0 0
...............................................................................................................TCGGTTGCTTGATCTTGTCAACCGAGT................................................................................................................. 27 0 20 0.95 19 0 19 0 0 0 0 0 0 0
.............................................................................................................................................................................ACCCGGCCTTTGGGCACGCGTCGGCCGTT................................................. 29 0 20 0.90 18 0 18 0 0 0 0 0 0 0
.............................................................................................................................................................TCACGACTGGGTCGTAACCCGGCCTT.................................................................... 26 0 20 0.90 18 0 18 0 0 0 0 0 0 0
....................................................................................................................................................................AGGGTCGTAACCCGGCCTTTGGGCACGCGT......................................................... 30 1 20 0.85 17 0 17 0 0 0 0 0 0 0
.............................................................................................................................................................................ACCCGGCCTTTGGGCACGCGTCGGCCGTTT................................................ 30 0 20 0.85 17 0 17 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TAAACGCACCGGCGACGCTCAGAAAC.............. 26 0 20 0.75 15 15 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGTCGTATAAACGCACCGGCGACGCT..................... 26 0 20 0.75 15 0 15 0 0 0 0 0 0 0
.................................GACCGTTCTACTTGGTCCAT...................................................................................................................................................................................................... 20 3 4 0.75 3 0 3 0 0 0 0 0 0 0
......................................................................................................CAATTGTGTTCGGTTGCTTGATCT............................................................................................................................. 24 0 20 0.65 13 13 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AAACGCACCGGCGACGCTCAGAAACAAT........... 28 0 20 0.65 13 12 0 0 1 0 0 0 0 0
..............................................................................................................................TGTCAACCGAGTCACACGCTTTATAT................................................................................................... 26 0 20 0.65 13 13 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ACGCACCGGCGACGCTCAGAAAC.............. 23 0 20 0.65 13 13 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTCACCCGGCCTTTGGGCAC............................................................. 27 1 20 0.65 13 0 13 0 0 0 0 0 0 0
.................................GACCGTTCTAGTTGTTCCAT...................................................................................................................................................................................................... 20 3 15 0.60 9 0 9 0 0 0 0 0 0 0
..........................................................................................................................................................................................GCACGCGTCGGCCGTTTGTGTCGT......................................... 24 0 20 0.60 12 12 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGCACCGGCGACGCTCAGAAAC.............. 22 0 20 0.60 12 8 0 3 1 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGATCTTGT.......................................................................................................................... 28 0 20 0.50 10 9 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AAACGCACCGGCGACGCTCAGAAA............... 24 0 20 0.50 10 10 0 0 0 0 0 0 0 0
....................................................................................................................................................................................CTTTGGGCACGCGTCGGCCGTTTGT.............................................. 25 0 20 0.45 9 9 0 0 0 0 0 0 0 0
.....................................................................................................................GCTTGATCTTGTCAACCGAGTCACACGC.......................................................................................................... 28 0 20 0.45 9 3 5 0 1 0 0 0 0 0
.........................................................................................................................GATCTTGTCAACCGAGTCACACGCT......................................................................................................... 25 0 20 0.45 9 9 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AACGCACCGGCGACGCTCAGAAAC.............. 24 0 20 0.45 9 9 0 0 0 0 0 0 0 0
............................................................................................................................CTTGTCAACCGAGTCACACGCTTTATAT................................................................................................... 28 0 20 0.45 9 8 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................AAACGCACCGGCGACGGTCAGAAAC.............. 25 1 20 0.45 9 9 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ACGCACCGGCGACGCTCAGAAACAA............ 25 0 20 0.35 7 7 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GCACGCGTCGGCCGTTTGTGTCGTAT....................................... 26 0 20 0.35 7 0 0 0 4 3 0 0 0 0
................................................................................................................................................................................AGGCCTTTGGGCACGCGTCGGCCGT.................................................. 25 1 20 0.30 6 0 6 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AAACGCACCGGCGACGCTCAGAAACA............. 26 0 20 0.30 6 3 3 0 0 0 0 0 0 0
....................................................................................................................................CCGAGTCACACGCTTTATATTA................................................................................................. 22 0 20 0.30 6 4 0 1 1 0 0 0 0 0
............................................................................................................................................................................................ACGCGTCGGCCGTTTGTGTCGTATAA..................................... 26 0 20 0.25 5 5 0 0 0 0 0 0 0 0
.....................ACTTATGCGGCTCACACTTC.................................................................................................................................................................................................................. 20 3 4 0.25 1 0 0 0 0 0 1 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGATC.............................................................................................................................. 24 0 20 0.25 5 5 0 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGATCGT............................................................................................................................ 26 1 20 0.25 5 0 0 5 0 0 0 0 0 0
......................................................................................................................................................................................TTGGGCACGCGTCGGCCGTTTGT.............................................. 23 0 20 0.25 5 5 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ACCGGCGACGCTCAGAAACAATCGAAA...... 27 0 20 0.25 5 5 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCGTAACCCGGCCTTTGGGCACGCGT......................................................... 26 0 20 0.25 5 5 0 0 0 0 0 0 0 0
...................................................................................................ATTCAATTGTGTTCGGTTGCTTGAT............................................................................................................................... 25 0 14 0.21 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CGCGTCGGCCGTTTGTGTCGTAT....................................... 23 0 20 0.20 4 0 4 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGCACCGGCGACGCTCAGAAACAAT........... 25 0 20 0.20 4 4 0 0 0 0 0 0 0 0
...............................................................................................................................GTCAACCGAGTCACACGCTTTATATT.................................................................................................. 26 0 20 0.20 4 3 0 0 1 0 0 0 0 0
.................................GACCGTCCTCCTTGGTCCAT...................................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................CAACCGAGTCACACGCTTTATATTAT................................................................................................ 26 0 20 0.20 4 4 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTTCACGACTGGGTCGTAACCCGGCCT..................................................................... 27 0 20 0.20 4 3 0 1 0 0 0 0 0 0
.........................................................................................................................................................................CGTAACCCGGCCTTTGGGCACGCGT......................................................... 25 0 20 0.20 4 4 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCACGACTGGGTCGTAACCCGGCCT..................................................................... 25 0 20 0.20 4 4 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GCCTTTGGGCACGCGTCGGACGTTT................................................ 25 1 20 0.20 4 0 4 0 0 0 0 0 0 0
.....................................................................................................CCAATTGTGTTCGGTTGCTTGATCT............................................................................................................................. 25 1 20 0.20 4 0 0 4 0 0 0 0 0 0
........................................................................................................ATTGTGTTCGGTTGCTTGATCTTGT.......................................................................................................................... 25 0 20 0.20 4 4 0 0 0 0 0 0 0 0
...............................................................................................................................GTCAACCGAGTCACACGCTTTATAT................................................................................................... 25 0 20 0.20 4 4 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCGGGCCTTTGGGCAC............................................................. 27 1 20 0.20 4 0 4 0 0 0 0 0 0 0
.........................................................................................................................GATCTTGTCAACCGAGTCACACGCTTT....................................................................................................... 27 0 20 0.20 4 4 0 0 0 0 0 0 0 0
.........................................................................................................TTGTGTTCGGTTGCTTGATCTTGT.......................................................................................................................... 24 0 20 0.20 4 4 0 0 0 0 0 0 0 0
....................................................................................................TTCAATTGTGTTCGGTTGCTTGATCT............................................................................................................................. 26 0 19 0.16 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GTCGTATAAACGCACCGGCGACG....................... 23 0 20 0.15 3 3 0 0 0 0 0 0 0 0
........................................................................................................................TGATCTTGTCAACCGAGTCACACGCT......................................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTGGGCACGCGGCGGCCGTTTGTGT............................................ 25 1 20 0.15 3 0 3 0 0 0 0 0 0 0
...................................................................................................................TTGCTTGATCTTGTCAACCGAGTCA............................................................................................................... 25 0 20 0.15 3 3 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACGCGTCGGCCGTTTGTGTCGT......................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGGGTCGTAACCCGGCCTTTGGGCACG............................................................ 27 0 20 0.15 3 0 3 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCACCGGCGACGCTCAGAAACAAT........... 24 0 20 0.15 3 3 0 0 0 0 0 0 0 0
............................................................................................................................................................TTCACGACTGGGTCGTAACCCGGCCT..................................................................... 26 0 20 0.15 3 3 0 0 0 0 0 0 0 0
...............................................................................................................................GTCAACCGAGTCACACGCTTTATATTAT................................................................................................ 28 0 20 0.15 3 3 0 0 0 0 0 0 0 0
..............................................................................................................................................................CACGACTGGGTCGTAACCCGGCCTTT................................................................... 26 0 20 0.15 3 3 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GCACGCGTCGGCCGTTTGTGTCG.......................................... 23 0 20 0.15 3 3 0 0 0 0 0 0 0 0
..............................................................................................................................................................CACGACTGGGTCGTAACCCGGCCTT.................................................................... 25 0 20 0.15 3 1 0 1 0 0 0 0 1 0
..........................................................................................................TGTGTTCGGTTGCTTGATCTTGTCA........................................................................................................................ 25 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTGTGTCGTATAAACGCACCGGCGACGC...................... 28 0 20 0.15 3 0 3 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCCGGCCTTTGGGCACGCGT......................................................... 31 0 20 0.15 3 0 3 0 0 0 0 0 0 0
............................................................................................................................CTTGTCAACCGAGTCACACGCTTTA...................................................................................................... 25 0 20 0.15 3 3 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGCGACGCTCAGAAACAAT........... 20 0 20 0.15 3 0 0 0 3 0 0 0 0 0
...........................................................................................................GTGTTCGGTTGCTTGATCTTGTCAA....................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGATCT............................................................................................................................. 25 0 20 0.15 3 0 0 2 0 0 0 1 0 0
............................................................................................................................................................TTCACGACTGGGTCGTAACCCGGCCTT.................................................................... 27 0 20 0.15 3 3 0 0 0 0 0 0 0 0
....................................................................................................................................CCGAGTCACACGCTTTATAT................................................................................................... 20 0 20 0.15 3 2 0 0 1 0 0 0 0 0
..........................................................................................................TGTGTTCGGTTGCTTGATCTTGT.......................................................................................................................... 23 0 20 0.15 3 0 0 2 0 1 0 0 0 0
..........................................................................................................TGTGTTCGGTTGCTTGATCTTGTC......................................................................................................................... 24 0 20 0.15 3 1 0 1 1 0 0 0 0 0
............................................................................................................................................................................................................................CGGCGACGCTCAGAAACAATCGAAATT.... 27 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.................................GACCGTCCTCGTTGTTCCAT...................................................................................................................................................................................................... 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCGACGCTCAGAAACAATCGAAAT..... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGACGCTCAGAAACAATCGAAATTCA.. 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCACCGGCGACGCTCAGAAACAATCGA........ 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AGCACGCGTCGGCGGTTTGTGTCGTAT....................................... 27 2 20 0.10 2 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................................CCGGCCTTTGGGCAGGCGTCGGCCGTTT................................................ 28 1 20 0.10 2 0 2 0 0 0 0 0 0 0
....................................................................................................................................CCGAGTCACACGCTTTATA.................................................................................................... 19 0 20 0.10 2 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................GCACGCGTCGGCCGTTTGTGTCGTATAA..................................... 28 0 20 0.10 2 1 0 0 1 0 0 0 0 0
..............................................................................................................................TGTCAACCGAGTCACACGCTTTATATT.................................................................................................. 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................GTTCGGTTGCTTGATCTTGTCAAC...................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................CACGCGTCGGCCGTTTGTGTCGTA........................................ 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................GTTCGGTTGCTTGATCTTGTCAACC..................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ACCGGCGACGCTCAGAAACAATCGA........ 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................................................................................................CTTGTCAACCGAGTCACACGCTTT....................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCACGACTGGGTCGTAACCCGGCCGT.................................................................... 26 1 20 0.10 2 0 0 2 0 0 0 0 0 0
....................................................................................................................TGCTTGATCTTGTCAACCGAGTCACA............................................................................................................. 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GGGCACGCGTCGGCCGTTTGT.............................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................CACGCGTCGGCCGTTTGTGTCGT......................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GGGCACGCGTCGGCCGTTTGTGT............................................ 23 0 20 0.10 2 0 0 1 0 1 0 0 0 0
........................................................................................................................TGATCTTGTCAACCGAGTCACACGCTT........................................................................................................ 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................................................................................................CTGGTCAACCGAGTCACACGCTTTAT..................................................................................................... 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................TATGTGTTCGGTTGCTTGATCTT............................................................................................................................ 23 2 20 0.10 2 2 0 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGATATT............................................................................................................................ 26 1 20 0.10 2 0 0 2 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGCGACGCTCAGAAACAATC.......... 21 0 20 0.10 2 0 0 0 2 0 0 0 0 0
.......................................................................................................AATTGTGTTCGGTTGCTTGATCTT............................................................................................................................ 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGTCGTATACACGCACCGGCGACGCT..................... 27 1 20 0.10 2 0 2 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGAT............................................................................................................................... 23 0 20 0.10 2 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................................CCGGCCTTTGGGCACGCGTCGGCCGTTT................................................ 28 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................................................CAATTGTGTTCGGTTGCTTGATCGT............................................................................................................................ 25 1 20 0.10 2 0 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................GGCACGCGTCGGCCGTTTGT.............................................. 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................TTGATCTTGTCAACCGAGTCACACGC.......................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................................................CAATTGTGTTCGGTTGCTTGATC.............................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGCACCGGCGACGCTCAGAAA............... 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
....................................................................................................................TGCTTGATCTTGTCAACCGAGTCACAC............................................................................................................ 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ACCGGCGACGCTCAGAAACAATCGAA....... 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AGCACGCGTCGGCCGTTTGGGTCGTAT....................................... 27 2 20 0.10 2 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACCGGCGACGCTCAGAAACAATCGA........ 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.....................................................................................................CCAATTGTGTTCGGTTGCTTGATCTT............................................................................................................................ 26 1 20 0.10 2 0 0 2 0 0 0 0 0 0
..................................................................................................................................................................................................................ATAAACGCACCGGGGACGCTCAGAAAC.............. 27 1 20 0.10 2 0 2 0 0 0 0 0 0 0
.................................................................................................................................................................................GGCCTTTGGGCACGCGTCGGCCGTTT................................................ 26 0 20 0.10 2 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................................ACGGCCTTTGGGCACGCGTCGGCCGTTT................................................ 28 1 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GTAACCCGGCCTTTGGGCACGCGT......................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................................................CAATTGTGTTCGGTTGGTTGATCTT............................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................................................CGTGTTCGGTTGCTTGATCTTGT.......................................................................................................................... 23 1 20 0.10 2 0 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................GGCACGCGTCGGCCGTTTGTGTC........................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................GATCTTGTCAACCGAGTGACACGCTT........................................................................................................ 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................ATTGTGTTCGGTTGCTTGATCTT............................................................................................................................ 23 0 20 0.10 2 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GTCGTATCCACGCACCGGCGACGCT..................... 25 2 20 0.10 2 0 2 0 0 0 0 0 0 0
.....................................................................................................................................CGAGTCACACGCTTTATATTAT................................................................................................ 22 0 20 0.10 2 0 0 2 0 0 0 0 0 0
.................................................................................................ATATTCAATTGTGTTCGGTTGCTTGAT............................................................................................................................... 27 0 11 0.09 1 1 0 0 0 0 0 0 0 0
...................................................................................................ATTCAATTGTGTTCGGTTGCTTGATCTT............................................................................................................................ 28 0 14 0.07 1 1 0 0 0 0 0 0 0 0
...................................................................................................ATTCAATTGTGTTCGGGTGCTTGAT............................................................................................................................... 25 1 14 0.07 1 1 0 0 0 0 0 0 0 0
....................................................................................................TTCAATTGTGTTCGGTTGCTTGGT............................................................................................................................... 24 1 19 0.05 1 0 0 1 0 0 0 0 0 0
....................................................................................................TTCAATTGTGTTCGGTTGCTTGATCTT............................................................................................................................ 27 0 19 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GGCCTTTGGGCACGCGTCGGCCG................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTGGTGACCCGGCCTTTGGGCAC............................................................. 27 2 20 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ACCGGCGACGCTCAGAAACAATCGAAAT..... 28 0 20 0.05 1 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................TTGGGCACGCGTCGGCCGTTTG............................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................CCAATTGTGTTCGGTTGCTTGATCTTGT.......................................................................................................................... 28 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................................................TTGTGTTCGGTTGCTTGATCTT............................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................GGTCGTAACCCGGCCTTTGGGCACGCGT......................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGTCGTATAAACGCACCGGCGACG....................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCCGGGCTTTGGGC............................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CGCGTCGGCCGTTTGTGTCGTATA...................................... 24 0 20 0.05 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................TCACGACTGGGTCGTAACCCGGCC...................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................GTCAACCGAGTCACACGCTTTATATTA................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTTGGGCACGCGTCGGCCGTTT................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GGGCACGCGTCGGCCGTTT................................................ 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.......................................................................................................AATTGTGTTCGGTTGCTT.................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................GCCTTTGGGCTCGCGTCGGCCGTT................................................. 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGATCTTCG.......................................................................................................................... 28 2 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGCCGACGCTCAGAAACAATCGAAAT..... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GGCACGCGTCGGCCGTTTGTGTCGTAT....................................... 27 0 20 0.05 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................GCCTTTGGGCGCGCGTCGGCCGTT................................................. 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................GTCAACCGAGTCACACGCTTTAT..................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTGGGAACGCGTCGGCCGTTTGTGT............................................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGTATAAACGCACCGGCGACGCTCAGAA................ 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................ATCTTGTCAACCGAGTCACACGCT......................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................CGGTTGCTTGATCTTGTCAACCGAGT................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................CCGAGTCACACGCTTTATATGA................................................................................................. 22 1 20 0.05 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCCGGCCTTTGGGCAA............................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................GCCCGCGTCGGCCGTTTGTGTCGTAT....................................... 26 1 20 0.05 1 0 0 0 0 0 1 0 0 0
.........................................................................................................................GATCTTGTCAACCCAGTCACACGCTT........................................................................................................ 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................CGGCCGTTTGTGTCGTATAAACGC................................. 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CGTAACCCGGCCTTTGGGCACGCGTA........................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................TCGGTTGCTTGATGTTGTCAACCGAGT................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................CGTCGGCCGTTTGTGTCGTAT....................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TGTGTTCGGTTGCTTTATCTT............................................................................................................................ 21 1 20 0.05 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AAACGCACCGGCGACGCTCAGAAACAATC.......... 29 0 20 0.05 1 0 0 0 1 0 0 0 0 0
........................................................................................................TTTGTGTTCGGTTGCTTGATCTT............................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ACCCGGCCTTTGGGCACGCGTCGGCCGT.................................................. 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................GAGCTTGTCAACCGAGTCACACGCTT........................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGAGCTT............................................................................................................................ 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AATCGCACCGGCGACGCTCAGAAA............... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................ACACGACTGGGTCGTAACCCGGCCTT.................................................................... 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0
......................................................................................................CAATTGTGTTCGGTTGTTTGATCTT............................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AAACGCACCGGCGACGCTCAGA................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................CCAATTGTGTTCGGTTGCTTGACCT............................................................................................................................. 25 2 20 0.05 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................TCACGCGTGGGTCGTAACCCGGCCTT.................................................................... 26 2 20 0.05 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCCGGCATTTGGGCAC............................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGTCGTATTAACGCACCGGCGACGCT..................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCCGGGCTTTGGGCAC............................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AAACGCACCGGCGACGATCAGAAAC.............. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................GTCGGCCGTTTGTGTCGTATAA..................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCGTAACCCGACCTTTGGGCACGCG.......................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CGTTTGTGTCGTATAAACGCACCGGC........................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................CAATTGTGTTCGGTTGCTTGATGT............................................................................................................................. 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGCGACTCTCAGAAACAATCGAAAT..... 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGCGACGCTCAGAAACAATCG......... 22 0 20 0.05 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................CCTTCGGGCACGCGTCGGCCGTTTGT.............................................. 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................GTCAACCGAGTCACACGCTTTATAA................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AGCCTTTGGGCACGCGTCGGCCGT.................................................. 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................CAACCGAGTCACACGCTGTATATTAT................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................TTGTTCGGTTGCTTGATCTT............................................................................................................................ 20 1 20 0.05 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................GGCCGTTTGTGTCGTATAAACGCAC............................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ACCCGGCCTTTGGGCACGCGTAGGCCGTT................................................. 29 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................CAACCGAGTCACACGCTTTATAT................................................................................................... 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................AACCGAGTCACACGCTT........................................................................................................ 17 0 20 0.05 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................TGCACGCGTCGGCCGTTTGTGTCGT......................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGATCTTG........................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCACCGGCGACGCTCAGAAAC.............. 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................ACCGAGTCACACGCTTTATAT................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AAAGGCACCGGCGACGCTCAGAAAC.............. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GGGAACGCGTCGGCCGTTT................................................ 19 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................CCGGCCTTTGGGAACGCGTCGGCCGT.................................................. 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................TTGTGTTCGGTTGCTTGATCTTTT.......................................................................................................................... 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................TGGGCACGCGTGGGCCGTTTGTGTCGTAT....................................... 29 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................CGTAACCCGGCCTTTGGGCACGCGTC........................................................ 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTCGATCTTGT.......................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................CCGAGTCACACGCTTTATATTAT................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................CAATTGTGTCCGGTTGCTTGATCTTG........................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................CTGTGTTCGGTTGCTTGATCCTGT.......................................................................................................................... 24 2 20 0.05 1 0 0 1 0 0 0 0 0 0
.....................................................................................................TCAATTGGGTTCGGTTGCTTGATCTT............................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................TCTTGTCAACCGAGTCACACGCTTTATA.................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................CACGACTGGGTCGTAACCCGGCCGT.................................................................... 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................TTGTGTCGTATAAAGGCACCGGCGACGC...................... 28 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................GGCACGCGGCGGCCGTTTGTGTCGT......................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATAAATGCACCGGCGACGCTCAGAAAC.............. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................ACGCTCAGAAACAATCGAAATTCAA. 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGACGCTCAGAAACAATCGAAATTCAA. 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACGCGTCGGCCGTTTGGGTCGTATA...................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAAACCGGCCTTTGGGCAC............................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................TTGATCTTGTCAACCGAGTCACACG........................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TGTGTTCGGTTGCTTGATCTT............................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GGCCGTTTGTGTCGTATAAAC................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................CGTGTTCGGTTGCTTGATCTTGTCAA....................................................................................................................... 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCTGTTGCTTGATCTT............................................................................................................................ 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.....................................................................................................ACAATTGTGTTCGGTTGCTTGATCT............................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCACGACTGGGTCGTAACCCGGCCTTT................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGTCGTATAAACCCACCGGCGACGCT..................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................TTGTGTTCGGTTGCATGATCTT............................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................AAATTGTGTTCGGTTGCTTGATCTTGT.......................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CCGGCGACGCTCAGAAACAA............ 20 0 20 0.05 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................CCGGCGACGCTCAGAAACAATCGA........ 24 0 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................GGCACGCGTCGGCCGTTGGTGTCGTAT....................................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................TCGGCCGTTAGTGTCGTATAAACGC................................. 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................GGCACGCGTCGGCCGCTTGTGTCGT......................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................GGCACGCGTCGGCCGTTT................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................GCTTGATCTTGTCAACCGAGTCACACG........................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ACAAGCACCGGCGACGCTC.................... 19 2 20 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................TGTGTTCGGTTGCTTGGTCTTGTCAAC...................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
....................................................................................................................TGCTTGATCTTGTCAACCGAGCCAC.............................................................................................................. 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................TCACGCGTCGGCCGTTTGTGTCGT......................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................GTCGTAACCCGGCCTTTGG................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCCGTTGCTTGATCTT............................................................................................................................ 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCCGGCCTTTGGGC............................................................... 25 0 20 0.05 1 0 0 1 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGATTGATCTT............................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................CAATTGTGTTCGGTTGCTTGATCTCGT.......................................................................................................................... 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CGTATAAACGCACCGGCGAAGCTCAGA................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................................................GTGTTCGGTTGCTTGATCTTGTCA........................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCCGGCCTTTGGGCAT............................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................ACGCGTCGGCCGTTTGTGT............................................ 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................TGATCTTGTCAACCGAGGCACACGCT......................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................TGTTCGGTTGCTTGATCTTGTCAA....................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCAGGCCTTTGGGCAC............................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGTCGTATCCACGCACCGGCGACGCT..................... 26 2 20 0.05 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................AACCGAGTCACACGCTTTATATTAT................................................................................................ 25 0 20 0.05 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................GCCTTTGGGCACGCATCGGCCGTTT................................................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGTTCTT............................................................................................................................ 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................TTGATCTTGTCAACCGAGTCACACGCTT........................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................CAATTGTGTTCGGTTGCTTGATCTTG........................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCGACGCTCAGAAACAATCGAAATTCA.. 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTAGTAACCCGGCCTTTGGGCAC............................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACCGGCGACGCTCAGAAAC.............. 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AGGCTCAGAAACAATCGAAATTCAA. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................CAATTGTGTTCGGTTGCTTGATCTTTG.......................................................................................................................... 27 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................TCGGTTGCTTGATCTTGTCAACCGCGT................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................TGTGTTCGGTTGCGTGATCGTGTCAAC...................................................................................................................... 27 2 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................TTGGGCCCGCGTCGGCCGTTTGTGT............................................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................TCTTGTCAACCGAGTCACACGCTTTAT..................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCCGGCCTTTGGTCACGCGT......................................................... 31 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.....................................................................................................TCAATTGTGTTCGGTTGCTTGATGTT............................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGGGTCGTAACCCGGCCTGTGGGCAC............................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................CGAGTCACACGCTTTATATT.................................................................................................. 20 0 20 0.05 1 0 0 0 1 0 0 0 0 0
............................................................................................................................CTTGTCAACCGAGTCAAACGCTTTAT..................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................................................................................CGATTGTGTTCGGTTGCTTGATCTT............................................................................................................................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................TCACGACTGGGTCGTAACGCGGCCTT.................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................TTGGGCACGCGGCGGCCGATTGTGT............................................ 25 2 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................GACGCGTCGGCCGTTTGTGTCGTAT....................................... 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACCGGCGACGCTCAGAAACAATC.......... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ACCGGCGACGCTCAGAAACTATCGAAAT..... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droYak3 3R:20416155-20416405 - dya_1100 TTCAAAATGTGA--------------TCTATTA-----GTTAAATACGCCGACTGGGAAGAGGAACAAGGTATGGTATTAACTGGAAATGTCTTAAGAGGTAACAATATCCT-----------------------------------------------------TACATATAAGTTAACACAAGCCAAC-GAACTAGAACA----GTTGGCT-------CAGTGTGCGAAA----TA--------TA-----------ATA-AAAGTGCTGACC-CAGCATTGGGCCGGAAACCCGTGCGCAGCCGGCA-AACACAGCATATTTGCGTGGCCGCTGCGAGTC------TTTGTTAGCT-TTAAGTT------------T
droEre2 scaffold_4929:24964312-24964494 + AAAAATTAATGA--------------TATATTA------------------------------------------------------------------------------------------------------------------------------------TATATATTAGTTAACACAAGCCAAC-GTACTAGAACA----GTTGGCT-------CAGTGCATGAAA----CC--------TA-----ATAGCGGC-----GTGCTGACC-CAGCATTGGGCCGGATGCTCGTGCGCAGCTGGCAAAACGCTGCATATTTGCGTGGCCGCTGCGAGTCTC---TTTTGTTATAATTTAAGT-------------T
droSec2 scaffold_117:37509-37722 + AGACATTTTCAT-GTG---CA-----------------------ACAACTGCTTTA-----------------------------------------------------GCA-----------------------------------------------------AACATATAAGTTAACACAAGCCAAC-GTACTAGAACA----GTTGGCT-------CAGTGTGCGAAA----TA--------TGATATAAAAACGTCA-AAAGTGCTGACC-CGGCATTGGGCCGGAAACTTGTGCGCAGACGGCA-ATCACAGCATATTTGTGTGGCCGCTGCGATTC-----TTTTGTTAGCT-TTAAGAATCATTTTATATTT
droSim2 3l:23328943-23329101 + ACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAGTGAACACAAGCCAAC-GGACTAGAACA----GTTGGCT-------CAGTGTATGAAA----CA--------TAAT---------ATC-AAAGTGCTGACC-CACCATTGGGCCGGAAACCCGTGCGCAGCCGGCA-AACACAGCATATTTGCGTGGCCGCTGCGAGTC------TTTTTAAGCT-TTAAGAA------------T
dm3 chrUextra:26473492-26473681 + TTAGAAGGTTAA--------------AACAC------------------------------------------------------------------------------GTA-----------------------------------------------------GTTATACAAGTTAACACGGGCCAAC-GAGCTAGACCA----GTTGGCT-------CAGTGCACGAAA----TT--------TAATACCA-TTACGTT-AAAGTGCTGACCCCAGCATCGGGCCGGAAACCCGTGCGCAGCCGGCA-AACACAGCATATTTGCGTGGCCGCTGCGAGTC-----TTTTGTTAGCT-GTAAGAT------------T
droEug1 scf7180000409789:4637-4858 + AGAGTAAAAGGG--------------TATATTA-----GA------------------------------------------------------------------------TTCGTTGAAAAGTATGTAACAGGTAGAATGAAGT---------------ATAT-----ATAAGTTAACTA-AGTCAACCGGGCGACGG--CAAT---GACCGACTGTC-------C----GAGAGT--------TC-----GCTCCGGCC-AAATTGCTGACA-CAGCGTCTGGCCGGAAGCCCGTGCATAGCCGGCA-AGCACTACCCATTGGAGTGGCCGCTATGATTCTCTTTTCATGTTAGCT-TTAAGT-------------T
droBia1 scf7180000302519:131063-131326 + GTGAT----------------------CTGGTG-----TTTATACCCGTTATCTACGA---GTAAAAGGGTAT-------ACTAGA--------------------------ATTGTCGGAAAGTATGTAAAAGGTAGAAGGAAGCGTTTCCGACCCCGTAAAGT-----ATAAGTTAACTGAAGTTAACCAAGCAGCGG--CAAT---GTCCGATTATT-------T----AAGAGT--------TC-----GCTCTGGCC-AAACTGCTGACA-TAGCGTCTGGCCGGAAGCCCATGCATAG-CGGCA-AGCACTGCACATTTGCGTGGCCGCTATGAAATAC--TTTTTGTTAGCT-TTAAGTT------------T
droTak1 scf7180000415643:1559-1770 - GCATTCATT-------AG------------------------------AGGCTTAGAAGGA----------------------------------------GACAA---ATA-----------------------------------------------------TATATACAAGTTAACTGTGGTCAACCCGATCAAGAT-C---GTTGACCG------CAGTTA----------CTTCGAAAATAA-----GCTCCGGCCGAAATTGCTGACC-TAGCAATGGGCCGGAAGCTCGTGCACAG-CGGCA-GACACTGCATATTTGCGTGGCCGCTGTGAGC------TTTTGTTAGCT-CTAAGTTTTGTCTTTAAGAA
droEle1 scf7180000488814:22450-22650 + TTAACATATG---------CAA----ATAGCCC-----TTAA---------------------------------------------------------------------------------------------------------------------------CATATGTAAGTTAACTGTGGCCAGCCGAACTAAAGT-C---GTTGACCA------CAGTTTACGTAAACAACT--------TC-----GCTCCGGCC-AAATTGCTGACC-ATGCAATGAGGCGGATGCTCGTGCGCGGACGGCA-AACACTGCATATTTGCGTGGCCGCTGCGAGCC------TCCGTTAGCT-TTAAGTCAATCCCT-----T
droRho1 scf7180000760387:1196-1390 - AAATGTATACAG-TCG---CA---------------------------------------------------------------------------------TCAAT-TCGC-----------------------------------------------------CATATATAAGTTAACTA-AGTTAACCGAGCGACGG--CAAT---GACCGATCGTT-------C----GACAGC--------TC-----GCTCCGGCC-AAACTGCTGACA-CAGCGTCTGGCCTGATACCCATGCATAGCCGGCA-AACACAGCATATTTGCGTGTCCGCTATGATATCAAATTTTTGTTAGCT-TTAAGTT------------T
droFic1 scf7180000453837:14063-14263 + AAAAATAAGG----------------TATT-TT-----ATAAAATAAAAAAA---------------------------------------------------------ATA-----------------------------------------------------TATATATAAGTTAACTA-AGTTAACCGGGCGACGG--CAAT---GACCGATCGTC-------C----GAAAGC--------TC-----GCTCCGGCC-AAATTGCTGAAA-CAGCGTCTGGCCGGAAGCCCGTGCATAGCCGGCA-AGCACTACCCATTGGAGTGGCCGCTATGAATCCCTTTTTATGTTAGCT-TTAAGT-------------T
droKik1 scf7180000298525:2589-2768 - ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAAGTTAACTGTGGTCAGCCAGACCAGAGT-C---GTTGACCA------TAGTCAACA--T----TA--------TAATAACGCTCCGGCC-AAACTGCTGACC-CAGCAATGGGCCGGATGCTCGTGCACACCCGGCA-GACACTGCATATTTGCGTGGCCGCTGTGAGTT------TTTGTTAGCT-ATAAGTTTATTCTTTATATT
droAna3 scaffold_13258:1531927-1532144 + TATAGTATGGAAT---AGAAAGGCAGAAC---ATAACAGGGATTTT--------------------------------------------------------CCATTGTACT-----------------------------------------------------TATACGTAAGTTAACTA-AGTCAACCGGGCGACGG--CAAT---GACCGATCGTC-------C----GAAAGC--------TC-----GCTCCGGCC-AAATTGCTGACC-CAGCGTCTGACCGGAAGCTCGTGCATAGCCGGCA-AGCACTGCCCATTGGAGTGGCCGCTATGAGTCTCA-CTTTTGTTAGTT-CTTAAGT------------T
droBip1 scf7180000395039:581-788 + ATAGTTATAACA--------------CAAAATATATTAATGGTTATAATGATTTTA--------------------------------------------------------------------------------------------------------------GAATATAAGTTAACTGAAGTTAACGGCGCAGCGG--CAAT---GTCCGATTATT-------T----AAGAGC--------TC-----GCTCTGGCC-AAACTGCTGACA-CAGCGTCTGGCCGGATGCCCATACGTAG-CGGCG-AGCACTGCATATTTGCGTGGCCGCTATGAAATAA--GTTTTGTTAGCT-TTAAGTT------------T
dp5 2:3017260-3017323 - TACGAAAAATGA--------------TCCACTA-----GTCAATAAACAGGACTGGGAGGAAGAACTAAGTA--------------------------------------------------------------------------------------------------ATAAGTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droPer2 scaffold_7:1332110-1332173 + TACGAAAAACGA--------------TCCACTA-----GTCAATAAACAGGACTGGGAGGAAGAACTAAGTA--------------------------------------------------------------------------------------------------ATAAGTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droWil2 scf2_1100000004943:9068809-9068861 + TTCCATATGTGA--------------TAAACTA-----ATTAAATACGTCGACTGGGAAGAGGAGCAAGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13050:373564-373720 + AAATTATTT--------------------------------AAGTGATCAATCTAT-----------------------------------------------------GTA-----------------------------------------------------TGTATATAAGTTAAGCGGAGTCAAC-G------AACA----GTTGGC---------------C----AGACTA--------TG-----ACTCCGAACACAATTGCTGAAT-AAGCATTGGGCTGGATGTCGTTGCATTGCCGGCA-GACACAGCATATTTGCGTGGCCGCTATGA----------------------------------------
droMoj3 scaffold_6540:18694087-18694141 + TTCGAAATGTGA--------------TAAACTT-----ATAAAATATTCCGTCTGGGAACAGGAGCAAGGTA-----------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
droGri2 scaffold_14830:4770171-4770247 - TTCGCAATGTGA--------------TAAACTT-----ATAAAATATTCCGACTGGGAGCAGGAGCAGGGTA-----------------------------------------------------------------------------------------------------AGTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-TAACGATTCATGTTT----T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TTCAAAATGTGA--------------TCTATTA-----GTTAAATACGCCGACTGGGAAGAGGAACAAGGTATGGTATTAACTGGAAATGTCTTAAGAGGTAACAATATCCT-----------------------------------------------------TACATATAAGTTAACACAAGCCAAC-GAACTAGAACA----GTTGGCT-------CAGTGTGCGAAA----TA--------TA-----------ATA-AAAGTGCTGACC-CAGCATTGGGCCGGAAACCCGTGCGCAGCCGGCA-AACACAGCATATTTGCGTGGCCGCTGCGAGTC------TTTGTTAGCT-TTAAGTT------------TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................TA--------TA-----------ATA-AAAGTGCTGACC-CAGCATT.................................................................................................26112.001205700000000
....................................................................................................................................................................................................................................................................TA-AAAGTGCTGACC-CAGCATTGGGCC............................................................................................26204.40881127500000000
......................................................................................................................................................................................................................................................TA-----------ATA-AAAGTGCTGACC-CAGCATTGGGCC............................................................................................2914.00400400000000
........GTGA--------------TCTATTA-----GTTAAATACGCCGAC.......................................................................................................................................................................................................................................................................................................................................2614.00400000000004
.............................................................................................................................................................................................................................................A--------TA-----------ATA-AAAGTGCTGACC-CAGCATT.................................................................................................2512.00202000000000
......................................................................................................................................................................................................................................................TA-----------ATA-AAAGTGCTGACC-CAGCATT.................................................................................................2412.00200200000000
................................................................................................................................................................................................AACTAGAACA----GTTGGCT-------CAGTGTGCGA......................................................................................................................................................27201.6533000000000033
...................................................................................................................................................................................................................................................................ATA-AAAGTGCTGACC-CAGCATTGGGCC............................................................................................2711.00100100000000
............................................................................................................................................................................................................................................TA--------TA-----------ATA-AAAGTGCTGACC-CAGCAT..................................................................................................2511.00100100000000
.......................................................................................................................................................................................................................................................A-----------ATA-AAAGTGCTGACC-CAGCATT.................................................................................................2311.00100100000000
...................................................................................GGAAATGTCTTAAGAGGT.......................................................................................................................................................................................................................................................................................1811.00100000100000
.......................................................................................................................................................................................................................................................A-----------ATA-AAAGTGCTGACC-CAGCATTGGGCC............................................................................................2811.00100100000000
.................................................................................................................................................................................................................................TGCGAAA----TA--------TA-----------ATA-AAAGTGCTGACC-C.......................................................................................................2711.00101000000000
.................................................CGACTGGGAAGAGGAACAAG.......................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................................................................................................................................................................................C-GAACTAGAACA----GTTGGCT-------CAGT............................................................................................................................................................23200.8517116000000000
.............................................................................................................................................................................................C-GAACTAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................24200.7515015000000000
...............................................................................................................................................................................................................................................................................................................GCCGGCA-AACACAGCATATTTGCGTG..................................................26200.5511000000000011
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTGCGA......................................................................................................................................................24200.5010000000000010
.............................................................................................................................................................................................C-GAACTAGAACA----GTTGGCT-------CAGTGTG.........................................................................................................................................................26200.40808000000000
................................................................................................................................................................................................AACTAGAACA----GTTGGCT-------CAGTGTGC........................................................................................................................................................25200.35705200000000
................................................................................................................................................................................................................................................................................................................CCGGCA-AACACAGCATATTTGCGT...................................................24200.30606000000000
............................................................................................................................................................................................AC-GAACTAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................25200.30605100000000
.............................................................................................................................................................................................C-GAACTAGAACA----GTTGGCT-------CAGTGT..........................................................................................................................................................25200.25505000000000
....................................................................................................................................................................................................................................................................TA-AAAGTGCTGACC-CAGCATTGGGC.............................................................................................25200.20403100000000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCGGCA-.....................................................................28200.15302100000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCCG.........................................................................26200.15302010000000
.............................................................................................................................................................................................C-GAACTAGAACA----GTTGGCT-------CAG.............................................................................................................................................................22200.15302000010000
..............................................................................................................................................................................................................................................................................................................AGCCGGCA-AACACAGCATATTTGCGT...................................................26200.15303000000000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCG.........................................................................25200.15301200000000
................................................................................................................................................................................................AACTAGAACA----GTTGGCT-------CAGTGTG.........................................................................................................................................................24200.15302100000000
............................................................................................................................................................................................AC-GAACTAGAACA----GTTGGCT-------CAGT............................................................................................................................................................24200.15302000010000
..........................................................................................................................................................................................CAAC-GAACTAGAACA----GTTGGCT-------................................................................................................................................................................22200.10201010000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTGCGAAA----................................................................................................................................................26200.10202000000000
.................................................................................................................................................................................................ACTAGAACA----GTTGGCT-------CAGT............................................................................................................................................................20200.10200000020000
.............................................................................................................................................................................................C-GAACTAGAACA----GTTGGCT-------CAGC............................................................................................................................................................23200.10210100000000
................................................................................................................................................................................................AACTAGAACA----GTTGGCT-------CAGTGTGCGT......................................................................................................................................................27200.10202000000000
.......................................................................................................................................................................................................................................................................AAAGTGCTGACC-CAGCATTGGGCCGG..........................................................................................26200.10200200000000
...........................................................................................................................................................................................AAC-GAACTAGAACA----GTTGGCT-------................................................................................................................................................................21200.10210000100000
................................................................................................................................................................................TAACACAAGCCAAC-GAACTAGAACA----GT............................................................................................................................................................................27200.10200200000000
........................................................................................................................................................................................................................................................................................................................ACACAGCATATTTGCGTGGCCGC.............................................23200.10200200000000
...............................................................................................................................................................................................GAACTAGAACA----GTTGGCT-------CAGTGTCA........................................................................................................................................................26200.10202000000000
................................................................................................................................................................................................AACTAGAACA----GTTGGCT-------CAGTGT..........................................................................................................................................................23200.10202000000000
.................................................................................................................................................................................................ACTAGAACA----GTTGGCT-------CAGTGTG.........................................................................................................................................................23200.10202000000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCC..........................................................................25200.10201100000000
..................................................................................................................................................................................................................................................................................................................................TTTGCGTGGCCGCTGCGAGTC------TTTG...........................25200.10202000000000
.................................................................................................................................................................................................................................................................................................................................................CGAGTC------TTTGTTAGCT-TTAAGTT------------T24130.08101000000000
........................................................................................................................................................................................................................................................................................................................................TGGCCGCTGCGAGTC------TTTGTTAGCT-T...................26200.05101000000000
......................................................................................................................................................................................................AACA----GTTGGCT-------CAGTGTGC........................................................................................................................................................19200.05101000000000
........................................................................................................................................................................................................................................................................................................................ACACAGCATATTTGCGTGGCCGCT............................................24200.05101000000000
....................................................................................................................................................................................................AGAACA----GTTGGCT-------CAGTGTGCGAAA----TA--------T.....................................................................................................................................28200.05100000010000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCGGCT-.....................................................................28200.05100100000000
................................................................................................................................................................................................................................................................................................................CCGGCA-AACACAGCATATTTGCG....................................................23200.05101000000000
.........................................................................................................................................................................................................A----GTTGGCT-------CAGTGTGCGAAA----T...............................................................................................................................................21200.05100000010000
............................................................................................................................................................................................................................................................................................................GCAGCCGGCA-AACACAGCATATTTGCGT...................................................28200.05101000000000
...........................................................................................................................................................................................AAC-GAACTAGAACA----GTTGGCT-------CAGT............................................................................................................................................................25200.05100000010000
................................................................................................................................................................................................................................................................................................................................TATTTGCGTGGCCGCTGCGAGTC------TTTG...........................27200.05101000000000
.........................................................................................................................................................................................................................................................................AGTGCTGACC-CAGCATTGGGCC............................................................................................22200.05100100000000
..................................................................................................................................................................................................CTAGAACA----GTTGGCT-------CAGTGTGC........................................................................................................................................................23200.05101000000000
...............................................................................................................................................................................................................TTGGCT-------CAGTGTGCGAAA----TA--------TA-----------.........................................................................................................................22200.05100000010000
.......................................................................................................................................................................................................................................................................................CATTGGGCCGGAAACCCGTGCGCAGC...........................................................................26200.05100100000000
.................................................................................................................................................................................................ACTAGAACA----GTTGGCT-------CAGTGTGCG.......................................................................................................................................................25200.05100000010000
.............................................................................................................................................................................................C-GAACTAGAACA----GTTGGCT-------CAGTGTGCG.......................................................................................................................................................28200.05101000000000
...............................................................................................................................................................................................GAACTAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................23200.05101000000000
....................................................................................................................................................................................................................................................................TA-AAAGTGCTGACC-CAGCATTGGGCCG...........................................................................................27200.05100010000000
..............................................................................................................................................................................................................................................................................TGACC-CAGCATTGGGCCGGAAACCCGTG.................................................................................28200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................CGAGTC------TTTGTTAGCT-TTAAGTT------------.23200.05101000000000
..................................................................................................................................................................................................................................................................................................................................TTTGCGTGGCCGCTGCGAGTC------TTTGTT.........................27200.05101000000000
............................................................................................................................................................................................AC-GAACTAGAACA----GTTGGCT-------CA..............................................................................................................................................................22200.05101000000000
............................................................................................................................................................................................................................................................................................................GCAGCCGGCA-AACACAGCATATTTGCG....................................................27200.05101000000000
.................................................................................................................................................................................................ACTAGAACA----GTTGGCT-------CAGTGTGCGA......................................................................................................................................................26200.05101000000000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCC..........................................................................24200.05100100000000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCGGC.......................................................................27200.05101000000000
...............................................................................................................................................................................................GAACTAGAACA----GTTGGCT-------CAGTGT..........................................................................................................................................................24200.05100000010000
............................................................................................................................................................................................AC-GAACTAGAACA----GTTGGCT-------CAGTGTGC........................................................................................................................................................28200.05101000000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTGCGAA.....................................................................................................................................................25200.05101000000000
........................................................................................................................................................................................................................................................................................................................ACACAGCATATTTGCGTGGCCGCTA...........................................25200.05101000000000
..............................................................................................................................................................................................................................................................................TGACC-CAGCATTGGGCCGGAAACCCG...................................................................................26200.05101000000000
..........................................................................................................................................................................................CAAC-GAACTAGAACA----GTTGGCT-------CAGT............................................................................................................................................................26200.05101000000000
.......................................................................................................................................................................................................................................................................AAAGTGCTGACC-CAGCATTGGGCC............................................................................................24200.05101000000000
.............................................................................................................................................................................................C-GAACTAGAACA----GTTGGCT-------CAGTGTGC........................................................................................................................................................27200.05100100000000
.............................................................................................................................................................................................C-GAACTAGAACA----GTTGGCT-------CA..............................................................................................................................................................21200.05101000000000
...........................................................................................................................................................................................................................................................................TGCTGACC-CAGCATTGGGC.............................................................................................19200.05101000000000
.......................................................................................................................................................................................AGCCAAC-GAACTAGAACA----GTTGGCT-------................................................................................................................................................................25200.05100100000000
....................................................................................................................................................................................................................................................................................................ACCCGTGCGCAGCCGGCA-AACACAGC.............................................................26200.05101000000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTG.........................................................................................................................................................21200.05101000000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCCGGC.......................................................................28200.05100100000000
droEre2
AAAAATTAATGA--------------TATATTA------------------------------------------------------------------------------------------------------------------------------------TATATATTAGTTAACACAAGCCAAC-GTACTAGAACA----GTTGGCT-------CAGTGCATGAAA----CC--------TA-----ATAGCGGC-----GTGCTGACC-CAGCATTGGGCCGGATGCTCGTGCGCAGCTGGCAAAACGCTGCATATTTGCGTGGCCGCTGCGAGTCTC---TTTTGTTATAATTTAAGT-------------TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................ACAAGCCAAC-GTACTAGAACA----GTT...........................................................................................................................................................................2411.0010000010
.......................................................................................................................................................................................................ACA----GTTGGCT-------CAGTGCATGA......................................................................................................................................................20140.0710000010
droSec2
AGACATTTTCAT-GTG---CA-----------------------ACAACTGCTTTA-----------------------------------------------------GCA-----------------------------------------------------AACATATAAGTTAACACAAGCCAAC-GTACTAGAACA----GTTGGCT-------CAGTGTGCGAAA----TA--------TGATATAAAAACGTCA-AAAGTGCTGACC-CGGCATTGGGCCGGAAACTTGTGCGCAGACGGCA-ATCACAGCATATTTGTGTGGCCGCTGCGATTC-----TTTTGTTAGCT-TTAAGAATCATTTTATATTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................TA--------TGATATAAAAACGTCA-AAAGTGC..............................................................................................................25202.3046300124
................................................................................................................................................................................................TACTAGAACA----GTTGGCT-------CAGTGTG.........................................................................................................................................................24200.4599000
................................................................................................................................................................................................TACTAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................22200.2553020
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTGCGA......................................................................................................................................................24200.2552012
................................................................................................................................................................................................TACTAGAACA----GTTGGCT-------CAGT............................................................................................................................................................21200.1531020
.............................................................................................................................................................................................................................................A--------TGATATAAAAACGTCA-AAAGTGC..............................................................................................................24200.1533000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTGCG.......................................................................................................................................................23200.1531011
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGTGTGGCCGCTG...........................................22200.1020011
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGTGTGGCCGCTGCGT........................................25200.1021001
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTG.........................................................................................................................................................21200.1022000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTGC........................................................................................................................................................22200.1022000
..............................................................................................................................................................................................................................................................................TGACC-CGGCATTGGGCCGGAAACTTG...................................................................................26200.1022000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACTTGTGCGCAGACG.........................................................................26200.1020020
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACTTGTGCGCAGACG.........................................................................25200.1020020
................................................................................................................................................................................................TACTAGAACA----GTTGGCT-------CAGTGT..........................................................................................................................................................23200.1022000
............................................................................................................................................................................................................................................................................................................................AGCATATTTGTGTGGCCGCTGC..........................................22200.1022000
.....................................................................................................................................................................................CAAGCCAAC-GTACTAGAACA----GTTG..........................................................................................................................................................................24200.1022000
............................................................................................................................................................................................................................................TA--------TGATATAAAAACGTCA-AAAGTGCTG............................................................................................................27200.1022000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGTGTGGCCGCTGCG.........................................24200.1022000
............................................................................................................................................................................................................................................TA--------TGATATAAAAACGTCA-AAAGTGCTGA...........................................................................................................28200.1020020
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGTGTGGCCGCTGC..........................................23200.1020002
...........................................................................................................................................................................TAAGTTAACACAAGCCAAC-G............................................................................................................................................................................................20140.0711000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACTTGTGCGCAGACGG........................................................................27150.0711000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACTTGTGCGCAGACGGCA-.....................................................................28150.0711000
..............................................................................................................................................................................................................................................................................................CCGGAAACTTGTGCGCAGACGGCA-AT...................................................................26160.0611000
..........................................................................................................................................................................................................................................................................................................GCGCAGACGGCA-ATCACAGCATATTT.......................................................26160.0611000
.......................................................................................................................................................................................................................................................................................................TGTGCGCAGACGGCA-ATCACAGCA............................................................24160.0611000
.........................................................................................................................................................................................................................................................................................................TGCGCAGACGGCA-ATCACAGCATATTT.......................................................27160.0611000
......................................................................................................................................................................................................................................................................................................TTGTGCGCAGACGGCA-ATCACAGCATA..........................................................27160.0610001
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTGCGAAA----................................................................................................................................................26200.0510010
...............................................................................................................................................................................................GTACTAGAACA----GTTGGCT-------CAG.............................................................................................................................................................21200.0510010
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTGCGAA.....................................................................................................................................................25200.0510010
............................................................................................................................................................................................................................................................................................................................................................TTTTGTTAGCT-TTAAGAATCATT........23200.0510100
...............................................................................................................................................................................................GTACTAGAACA----GTTGGCT-------CAGTGTT.........................................................................................................................................................25200.0510010
................................................................................................................................................................................................................TGGCT-------CAGTGTGCGAAA----TA--------A.....................................................................................................................................20200.0510100
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACTTGTGCGCAGAC..........................................................................25200.0510010
................................................................................................................................................................................................TACTAGAACA----GTTGGCT-------CAGTGTGT........................................................................................................................................................25200.0511000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACTTGTGCGC..............................................................................21200.0510010
..................................................................................................................................................................................................................................................................................................................................TTTGTGTGGCCGCTGCGATT......................................20200.0510010
................................................................................................................................................................................................TACTAGAACA----GTTGGCT-------CAG.............................................................................................................................................................20200.0510010
............................................................................................................................................................................................................................................TA--------TGATATAAAAACGTCA-AAAGTGCTA............................................................................................................27200.0510010
.............................................................................................................................................................................................C-GTACTAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................24200.0511000
......................................................................................................................................................................................................................................................TGATATAAAAACGTCA-AAAGTGC..............................................................................................................23200.0511000
............................................................................................................................................................................................................................................TA--------TGATATAAAAACGTCA-AAAGTGCA.............................................................................................................26200.0511000
............................................................................................................................................................................................................................................................................................................................AGCATATTTGTGTGGCCGCTGCT.........................................23200.0511000
............................................................................................................................................................................................................................................TA--------TGATATAAAAACGTCA-AAAGTG...............................................................................................................24200.0510010
................................................................................................................................................................................................TACTAGAACA----GTTGGCT-------CAGTGTA.........................................................................................................................................................24200.0511000
................................................................................................................................................................................................TACTAGAACA----GTTGGCT-------CAGTGTAA........................................................................................................................................................25200.0510010
............................................................................................................................................................................................AC-GTACTAGAACA----GTTGGCT-------CAGG............................................................................................................................................................24200.0511000
............................................................................................................................................................................................................................................................................................................................AGCATATTTGTGTGGCCGCTGCG.........................................23200.0511000
...........................................................................................................................................................................................AAC-GTACTAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................26200.0511000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGTGTGGCCGCTGT..........................................23200.0511000
................................................................................................................................................................................TAACACAAGCCAAC-GTACTAGAACA----GT............................................................................................................................................................................27200.0510010
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................19200.0511000
....................................................................................................................................................................................................AGAACA----GTTGGCT-------CAGTGTGCGAAA----................................................................................................................................................25200.0511000
.................................................................................................................................................................................................ACTAGAACA----GTTGGCT-------CAGTGTG.........................................................................................................................................................23200.0511000
.....................................................................................................................................................................................................................................................................................................................A-ATCACAGCATATTTGTGTGGCCGCTG...........................................27200.0511000
............................................................................................................................................................................................................................................................................................................................................................TTTTGTTAGCT-TTAAGAATCATTT.......24200.0511000
.............................................................................................................................................................................................................................................................AAAACGTCA-AAAGTGCTGACC-CGGC....................................................................................................25200.0510010
.......................................................................................................................................................................................................ACA----GTTGGCT-------CAGTGTGCGAA.....................................................................................................................................................21200.0510010
.............................................................................................................................................................................................................................................A--------TGATATAAAAACGTCA-AAAGTGCA.............................................................................................................25200.0511000
................................................................................................................................................................................................TACTAGAACA----GTTGGCT-------CAGTGTT.........................................................................................................................................................24200.0511000
droSim2
ACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAGTGAACACAAGCCAAC-GGACTAGAACA----GTTGGCT-------CAGTGTATGAAA----CA--------TAAT---------ATC-AAAGTGCTGACC-CACCATTGGGCCGGAAACCCGTGCGCAGCCGGCA-AACACAGCATATTTGCGTGGCCGCTGCGAGTC------TTTTTAAGCT-TTAAGAA------------TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGTA.........................................................................................................................................................241029.7029700054063789323120181000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGACTAGAAC...................................................................................................................................................................................29224.004800000012241110000000
...............................................................................................................................................................................TGAACACAAGCCAAC-GGACTAGAACA----GT............................................................................................................................................................................28223.00460000001820350000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAA.....................................................................................................................................................251616.502640000001546337100000000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGACTAGA.....................................................................................................................................................................................27216.5033000000319250040000
.........................................................................................................................................................................TATAAGTGAACACAAGCCAAC-GGAC.........................................................................................................................................................................................25211.5023000000010372010000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGACTAGAA....................................................................................................................................................................................2828.501700000016220060000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGT..........................................................................................................................................................23106.606600020015102246151000
...............................................................................................................................................................................TGAACACAAGCCAAC-GGACTAGAACA----G.............................................................................................................................................................................2726.501300000025200040000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGACTA.......................................................................................................................................................................................2526.501300000011311060000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAAA----C...............................................................................................................................................27166.441030000006572610040000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAAA----CA--------......................................................................................................................................28155.5383000000695810000000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGACTAGAACA----..............................................................................................................................................................................3025.501100000047000000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCCGG........................................................................2765.1731000000215136040000
.........................................................................................................................................................................TATAAGTGAACACAAGCCAAC-GGACTA.......................................................................................................................................................................................2725.001000000000020080000
.....................................................................................................................................................................................................................................AAA----CA--------TAAT---------ATC-AAAGTGCTGACC-C.......................................................................................................25144.86680007140000046010000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGA......................................................................................................................................................24174.828200000050101561000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAAA----................................................................................................................................................26164.63740000004718412020000
.........................................................................................................................................................................................................................................................T---------ATC-AAAGTGCTGACC-CACCATTGGG..............................................................................................2624.50900000090000000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTG...........................................23174.24720000003403620000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGCGA........................................25163.94630003180028048020000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGACTAG......................................................................................................................................................................................2623.50700000002110030000
...............................................................................................................................................................................TGAACACAAGCCAAC-GGACTAGAACA----..............................................................................................................................................................................2623.50700000004000030000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATG.......................................................................................................................................................23173.355700020010162316170000
...............................................................................................................................................................................TGAACACAAGCCAAC-GGACTAGAAC...................................................................................................................................................................................2523.00600000022100010000
...............................................................................................................................................................................TGAACACAAGCCAAC-GGACTAGAACA----GTT...........................................................................................................................................................................2922.50500100022000000000
.......................................................................................................................................................................................................................................................................AAAGTGCTGACC-CACCATTGGGCCGGA.........................................................................................2722.50500000031100000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGCG.........................................24172.4742000300221158110000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................22102.1021000000100230141000
...............................................................................................................................................................................TGAACACAAGCCAAC-GGACTAGAA....................................................................................................................................................................................2422.00400000012000010000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGACA........................................................................................................................................................................................2422.00400000020000020000
.........................................................................................................................................................................................................................................................T---------ATC-AAAGTGCTGACC-CACCATTGGGCCGGA.........................................................................................3122.00400000040000000000
....................................................................................................................................................................................................................................................................................................................................TGCGTGGCCGCTGCGAGTC------TTTTTA.........................2522.00400000010300000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGCGA........................................26161.9431000100251310000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTG...........................................22171.8832002600010813020000
................................................................................................................................................................................................................................GTATGAAA----CA--------TAAT---------ATC-AAAGTGC..............................................................................................................24151.732600000009890000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGTAT........................................................................................................................................................25101.701700010002022073000
.....................................................................................................................................................................................................................................AAA----CA--------TAAT---------ATC-AAAGTGCTGACC-........................................................................................................24141.6423000300000020000000
............................................................................................................................................................................................................................................CA--------TAAT---------ATC-AAAGTGCTGACC-CACCA...................................................................................................2621.50300000003000000000
.CG----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAGTGAACACAAGCCAAC-GGAC.........................................................................................................................................................................................2721.50300200000000010000
.CG----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAGTGAACACAAGCCAAC-GGA..........................................................................................................................................................................................2621.50300000001020000000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGAC.........................................................................................................................................................................................2321.50300000020010000000
.........................................................................................................................................................................TATAAGTGAACACAAGCCAAC-GGA..........................................................................................................................................................................................2421.50300000001200000000
...............................................................................................................................................................................TGAACACAAGCCAAC-G............................................................................................................................................................................................1621.50300000012000000000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGACTAA......................................................................................................................................................................................2621.50300000000000030000
ACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAGTGAACACAAGCCAAC-GGAC.........................................................................................................................................................................................2821.50300000002000010000
.....................................................................................................................................................................................................................................AAA----CA--------TAAT---------ATC-AAAGTGCTGACC-CA......................................................................................................26141.4320000000000019010000
.................................................................................................................................................................................AACACAAGCCAAC-GGACTAGAACA----GT............................................................................................................................................................................2681.3811001000001000000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGT............................................................................................................................................................21101.301300400003014010000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGC..........................................24171.2922000000160510000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGC...........................................................................2491.1110000000000010000000
............................................................................................................................................................................................AC-GGACTAGAACA----GTTGGCT-------CAG.............................................................................................................................................................23101.101100000053300000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGTT.........................................................................................................................................................24101.101100100060200020000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGCGAG.......................................27131.0814000000101300000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGC..........................................23171.061800050005017000000
.............................................................................................................................................................................AGTGAACACAAGCCAAC-GGACTAGA.....................................................................................................................................................................................2521.00200000000100010000
.........................................................................................................................................................................................................................................................T---------ATC-AAAGTGCTGACC-CACCATTGGGC.............................................................................................2721.00200000020000000000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-G............................................................................................................................................................................................2021.00200000000002000000
.............................................................................................................................................................................AGTGAACACAAGCCAAC-GGACTAGAACA----..............................................................................................................................................................................2821.00200000001010000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGTATGA......................................................................................................................................................27101.001000000043300000000
................................................................................................................................................................................................GACTAGAACA----GTTGGC........................................................................................................................................................................16101.001000000043012000000
............................................................................................................................................................................AAGTGAACACAAGCCAAC-GGACTAGAAC...................................................................................................................................................................................2821.00200000001000010000
.........................................................................................................................................................................................................................................................T---------ATC-AAAGTGCTGACC-CACCATTGG...............................................................................................2521.00200000020000000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTA.........................................................................................................................................................21181.001800000024308010000
....................................................................................................................................................................................................................................................................................................ACCCGTGCGCAGCCGGCA-AACACAGC.............................................................2670.86600000600000000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGCG.........................................25170.8214000000120101000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCA.............................................................................2290.78700006000001000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGTAA........................................................................................................................................................25100.70700000001011031000
.............................................................................................................................................................................................C-GGACTAGAACA----GTTGGCT-------CAGTGTA.........................................................................................................................................................26100.70700000041200000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGTATG.......................................................................................................................................................26100.70700000001204000000
..........................................................................................................................................................................................CAAC-GGACTAGAACA----GTTGGCT-------CAG.............................................................................................................................................................25100.70700000000011050000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGCGAG.......................................26130.69900000005004000000
.........................................................................................................................................................................................................................................................T---------ATC-AAAGTGCTGACC-CACCATTGGA..............................................................................................2630.67200000020000000000
............................................................................................................................................................................................................................................CA--------TAAT---------ATC-AAAGTGCTGACC-CA......................................................................................................23150.671000000018000010000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCGG........................................................................2660.67400000002020000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAG............................................................................2390.67600000600000000000
.....................................................................................................................................................................................................................................AAA----CA--------TAAT---------ATC-AAAGTGCTGACC-CAC.....................................................................................................2730.67200011000000000000
.....................................................................................................................................................................................................................................AAA----CA--------TAAT---------ATC-AAAGTGCT.............................................................................................................20160.631000008000002000000
............................................................................................................................................................................................................................................CA--------TAAT---------ATC-AAAGTGCTGA...........................................................................................................19180.6111000010001000000000
.....................................................................................................................................................................................................................................AAA----CA--------TAAT---------ATC-AAAGT................................................................................................................17180.6111000000000011000000
.............................................................................................................................................................................................C-GGACTAGAACA----GTTGGCT-------CAG.............................................................................................................................................................22100.60600000020310000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCCGGCA-.....................................................................2950.60300010001001000000
..............................................................................................................................................................................................................GTTGGCT-------CAGTGTATG.......................................................................................................................................................16200.6012000000000012000000
...............................................................................................................................................................................................................................................................................................................................ATATTTGCGTGGCCGCTG...........................................18170.5910000000000010000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGA..........................................24170.591000000021610000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAAT----................................................................................................................................................26160.56900000042210000000
........................................................................................................................................................................................................CA----GTTGGCT-------CAGTGTATGAAA----CA--------......................................................................................................................................23160.56900009000000000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCCG.........................................................................2690.56500010000004000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCC..........................................................................2590.56500000000005000000
...................................................................................................................................................................................................................................................................ATC-AAAGTGCTGACC-CACCATTGG...............................................................................................2420.50100000010000000000
..G----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAGTGAACACAAGCCAAC-GGAC.........................................................................................................................................................................................2620.50100000000000010000
...............................................................................................................................................................................TGAACACAAGCCAAC-GGACTAGAACA----T.............................................................................................................................................................................2720.50100000010000000000
.............................................................................................................................................................................................C-GGACTAGAACA----GTTGGCT-------CAGTGT..........................................................................................................................................................25100.50500000020120000000
.....................................................................................................................................................................................................................................................................................ACCATTGGGCCGGAAACCCGTGCGC..............................................................................2520.50100000000001000000
..............................................................................................................................................................................GTGAACACAAGCCAAC-G............................................................................................................................................................................................1720.50100000000001000000
..............................................................................................................................................................................GTGAACACAAGCCAAC-GGACTAGAAC...................................................................................................................................................................................2620.50100000000000010000
.CG----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAGTGAACACAAGCC.................................................................................................................................................................................................2020.50100000001000000000
...............................................................................................................................................................................................................................................................................................................................................TGCGAGTC------TTTTTAAGCT-....................1820.50100000000001000000
.........................................................................................................................................................................TATAAGTGAACACAAGCCAAC-GGACTT.......................................................................................................................................................................................2720.50100000000100000000
.........................................................................................................................................................................TATAAGTGAACACAAGCCAAC-GGACTAG......................................................................................................................................................................................2820.50100000001000000000
...........................................................................................................................................................................................................................................................................TGCTGACC-CACCATTGGGCCGGA.........................................................................................2320.50100000001000000000
..............................................................................................................................................................................................................................................................................TGACC-CACCATTGGGCCGGAAACCCG...................................................................................2620.50100000000010000000
...................................................................................................................................................................................................................................................................ATC-AAAGTGCTGACC-CACCATTGGG..............................................................................................2520.50100000010000000000
.............................................................................................................................................................................AGTGAACACAAGCCAAC-GGA..........................................................................................................................................................................................2020.50100000000010000000
..............................................................................................................................................................................GTGAACACAAGCCAAC-GGACT........................................................................................................................................................................................2120.50100000000010000000
...............................................................................................................................................................................TGAACACAAGCCAAC-GGACTAGA.....................................................................................................................................................................................2320.50100000001000000000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGACG........................................................................................................................................................................................2420.50100000000000010000
....................................................................................................................................................................................................................................................................TC-AAAGTGCTGACC-CACCATTGGGCCGGA.........................................................................................2920.50100000010000000000
.........................................................................................................................................................................................................................................................T---------ATC-AAAGTGCTGACC-CACCATTGGGA.............................................................................................2720.50100000010000000000
..........................................................................................................................................................................ATAAGTGAACACAAGCCAAC-GGACTAGA.....................................................................................................................................................................................2820.50100000000010000000
...............................................................................................................................................................................................................................................................................................................................................TGCGAGTC------TTTTTAAGCT-TTAAGA..............2420.50100000000010000000
............................................................................................................................................................................................AC-GGACTAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................25100.50500000012110000000
.........................................................................................................................................................................TATAAGTGAACACAAGCCAAC-GGACA........................................................................................................................................................................................2620.50100000000000010000
..G----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAGTGAACACAAGCCAAC-GGA..........................................................................................................................................................................................2520.50100000001000000000
...........................................................................................................................................................................TAAGTGAACACAAGCCAAC-GGACT........................................................................................................................................................................................2420.50100000000100000000
..............................................................................................................................................................................................................................................................................TGACC-CACCATTGGGCCGGAAACCCGTG.................................................................................2820.50100000000010000000
..............................................................................................................................................................................GTGAACACAAGCCAAC-GGACTA.......................................................................................................................................................................................2220.50100000000000010000
..............................................................................................................................................................................GTGAACACAAGCCAAC-GGACTAGAA....................................................................................................................................................................................2520.50100000001000000000
...............................................................................................................................................................................TGAACACAAGCCAAC-GGACTAGAACA----AA............................................................................................................................................................................2820.50100000001000000000
...................................................................................................................................................................................................................................TGAAA----CA--------TAAT---------ATC-AAAGTGCTGAC..........................................................................................................25140.50700007000000000000
.........................................................................................................................................................................TATAAGTGAACACAAGCCAAC-G............................................................................................................................................................................................2220.50100000000001000000
..............................................................................................................................................................................................................................................................................TGACC-CACCATTGGGCCGGAAACCC....................................................................................2520.50100000000010000000
................................................................................................................................................................................GAACACAAGCCAAC-GGACTAGAACA----GT............................................................................................................................................................................2720.50100100000000000000
............................................................................................................................................................................................................................................CA--------TAAT---------ATC-AAAGTGCTGACC-CACC....................................................................................................2520.50100000001000000000
.........................................................................................................................................................................TATAAGTGAACACAAGCCAAC-GGACTAGA.....................................................................................................................................................................................2920.50100000000100000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGT..........................................24180.50900000020610000000
.............................................................................................................................................................................AGTGAACACAAGCCAAC-GGACTAGAAC...................................................................................................................................................................................2720.50100000001000000000
.....................................................................................................................................................................................................................................AAA----CA--------TAAT---------ATC-AAAGTGC..............................................................................................................19180.44800008000000000000
....................................................................................................................................................................................................................................GAAA----CA--------TAAT---------ATC-AAAGTGC..............................................................................................................20180.44800008000000000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTAT........................................................................................................................................................22180.44800000001111040000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGCGT........................................25170.41700000003021010000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAT.....................................................................................................................................................25170.41700000041110000000
................................................................................................................................................................................................................................GTATGAAA----CA--------TAAT---------ATC-AAAGTGA..............................................................................................................24150.40600000004020000000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCGGCA-AA...................................................................3050.40200000010100000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTAG..........................................................................................................................................................23100.40400003000000001000
.............................................................................................................................................................................................C-GGACTAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................24100.40400000030000010000
............................................................................................................................................................................................AC-GGACTAGAACA----GTTGGCT-------CAGTGTA.........................................................................................................................................................27100.40400000022000000000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCGGCA-.....................................................................2850.40200000000010010000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGTATGAA.....................................................................................................................................................28100.40400000022000000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------................................................................................................................................................................17100.40400000000004000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCT............................................22190.37700000010510000000
.....................................................................................................................................................................................................................................AAA----CA--------TAAT---------ATC-AAAGTGCTGAC..........................................................................................................23140.36500010000004000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAAA----T...............................................................................................................................................27170.35600000021210000000
...................................................................................................................................................................................................................................TGAAA----CA--------TAAT---------ATC-AAAGTGCTGACC-CAC.....................................................................................................2930.33100010000000000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGT..........................................23180.33600000000014010000
.........................................................................................................................................................................TATAAGTGAACACAAGCCT................................................................................................................................................................................................1930.33100000010000000000
.............................................................................................................................................................................................................................................A--------TAAT---------ATC-AAAGTGCTGACC-CAC.....................................................................................................2330.33100000000001000000
.........................................................................................................................................................................................................................................................................................................TGCGCAGCCGGCA-AACACAGCATA..........................................................2490.33300000000001020000
...................................................................................................................................................................................CACAAGCCAAC-GGACTAGAACA----G.............................................................................................................................................................................2390.33300000002000010000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCT............................................21190.32600000001005000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGCGAA.......................................26160.31500010002002000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGCGAGT......................................27130.31400000003001000000
..........................................................................................................................................................................................CAAC-GGACTAGAACA----GTTGGCT-------CAGT............................................................................................................................................................26100.30300000000100020000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................19200.30600000002013000000
............................................................................................................................................................................................AC-GGACTAGAACA----GTTGGCT-------CAGT............................................................................................................................................................24100.30300010011000000000
............................................................................................................................................................................................AC-GGACTAGAACA----GTTGGCT-------CA..............................................................................................................................................................22100.30300000020010000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTAGT.........................................................................................................................................................24100.30300003000000000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGT..........................................................................................................................................................20200.30600000000004020000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------C...............................................................................................................................................................18100.30300010000002000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CA..............................................................................................................................................................19100.30300000020100000000
...........................................................................................................................................................................................AAC-GGACTAGAACA----GTTGGCT-------CA..............................................................................................................................................................23100.30300000001000020000
...............................................................................................................................................................................................................................................................................................................................ATATTTGCGTGGCCGCTGC..........................................19170.29500000000005000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAAA----CA--------TA....................................................................................................................................30150.27400000021100000000
.........................................................................................................................................................................................................................................................T---------ATC-AAAGTGCTGACC-CACCATTGGGCCC...........................................................................................2940.25100000000001000000
..............................................................................................................................................................................................................................................................................TGACC-CACCATTGGGCCGGAAACCCGTGT................................................................................2940.25100000000010000000
.................................................................................................................................................................................AACACAAGCCAAC-GGACTAGAACA----GG............................................................................................................................................................................2680.25200200000000000000
..................................................................................................................................................................................ACACAAGCCAAC-GGACTAGAACA----G.............................................................................................................................................................................2480.25200000001000010000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGCT.........................................24170.24400000000022000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGCA.........................................24170.24400000002011000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGA..........................................23170.24400000000021010000
................................................................................................................................................................................................................................GTATGAAA----CA--------TAAT---------ATC-AAAGTGCT.............................................................................................................25130.23300000001020000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGCTGCGAGA......................................27130.23300000012000000000
...................................................................................................................................................................................CACAAGCCAAC-GGACTAGAACA----GTTGGC........................................................................................................................................................................2890.22200000011000000000
...................................................................................................................................................................................CACAAGCCAAC-GGACTAGAACA----GTT...........................................................................................................................................................................2590.22200000002000000000
.........................................................................................................................................................................................................................................................................................................TGCGCAGCCGGCA-AACACAGCATAT.........................................................2590.22200000000000020000
...................................................................................................................................................................................CACAAGCCAAC-GGACTAGAACA----GTTGG.........................................................................................................................................................................2790.22200000002000000000
...................................................................................................................................................................................CACAAGCCAAC-GGACTAGAACA----GT............................................................................................................................................................................2490.22200100000000010000
.............................................................................................................................................................................................C-GGACTAGAACA----GTTGGCT-------CAGT............................................................................................................................................................23100.20200000020000000000
..........................................................................................................................................................................................CAAC-GGACTAGAACA----GTTGGCT-------CAGAAA..........................................................................................................................................................28100.20200000000000020000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCGGCA-A....................................................................2950.20100000000000010000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGA............................................................................................................................................................21100.20200000001000010000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTA...........................................................................................................................................................22100.20200000000000002000
............................................................................................................................................................................................AC-GGACTAGAACA----GTTGGCT-------CAGTGT..........................................................................................................................................................26100.20200000011000000000
..........................................................................................................................................................................................CAAC-GGACTAGAACA----GTTGGCT-------CA..............................................................................................................................................................24100.20200000000010010000
.....................................................................................................................................................................................CAAGCCAAC-GGACTAGAACA----GTTGGC........................................................................................................................................................................26100.20200000000200000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAAA----CA--------T.....................................................................................................................................29150.20300000030000000000
.....................................................................................................................................................................................CAAGCCAAC-GGACTAGAACA----G.............................................................................................................................................................................21100.20200000002000000000
..........................................................................................................................................................................................CAAC-GGACTAGAACA----GTTGGCT-------C...............................................................................................................................................................23100.20200000000000020000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCGCAGCCGGC.......................................................................2850.20100000000000010000
..........................................................................................................................................................................................CAAC-GGACTAGAACA----GTTGGCT-------CAGTG...........................................................................................................................................................27100.20200000010000010000
......................................................................................................................................................................................................................................................TAAT---------ATC-AAAGTGCTGACC-C.......................................................................................................20160.19300000000003000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGTAAA.......................................................................................................................................................26110.18200000000002000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGATA........................................................................................................................................................25110.18200000001000010000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGCA.........................................25170.18300000030000000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGATT----................................................................................................................................................26170.18300000030000000000
...........................................................................................................................................................................................................................................................................................GGGCCGGAAACCCGTGCGCAGCCGG........................................................................2560.17100000010000000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATT.......................................................................................................................................................23180.17300000012000000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTAA........................................................................................................................................................22190.16300000000010020000
................................................................................................................................................................................................................................................................................................................................TATTTGCGTGGCCGCTGCGAG.......................................21130.15200000000011000000
................................................................................................................................................................................................................TGGCT-------CAGTGTATGAAA----CA--------TAAT---------ATC-.....................................................................................................................26130.15200000000002000000
.......................................................................................................................................................................................................................................................................................................................AACACAGCATATTTGCGTGGCCGCTGC..........................................27130.15200000000010010000
................................................................................................................................................................................................................................GTATGAAA----CA--------TAAT---------ATC-AAAGTGCTGA...........................................................................................................27130.15200000000200000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGCGAGT......................................28130.15200000020000000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAAA----CA--------TAA...................................................................................................................................31130.15200000020000000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGCGAGTC------T..............................30130.15200000020000000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGC................................................17200.15300000000003000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGT............................................................................................................................................................18200.15300000001101000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGC................................................18200.15300000000300000000
....................................................................................................................................................................................................AGAACA----GTTGGCT-------CAGTGT..........................................................................................................................................................19200.15300000000003000000
...................................................................................................................................................................................................................................TGAAA----CA--------TAAT---------ATC-AAAGTGCTGACC-C.......................................................................................................27140.14200010010000000000
.......................................................................................................................................................................................................................................................................................................CGTGCGCAGCCGGCA-AACACAGCATA..........................................................2670.14100000010000000000
...............................................................................................................................................................................................................................................................................................CGGAAACCCGTGCGCAGCCGGCA-AACAC................................................................2870.14100000000000010000
..............................................................................................................................................................................................................................................................................................CCGGAAACCCGTGCGCAGCCGGCA-AAA..................................................................2770.14100000000100000000
...............................................................................................................................................................................................................................................................................................CGGAAACCCGTGCGCAGCCGGCA-AAC..................................................................2670.14100000000100000000
.............................................................................................................................................................................................................................................A--------TAAT---------ATC-AAAGTGCTGACC-........................................................................................................20160.13200000000002000000
..................................................................................................................................................................................ACACAAGCCAAC-GGACTAGAACA----GT............................................................................................................................................................................2580.13100100000000000000
.................................................................................................................................................................................AACACAAGCCAAC-GGACTAGAACA----..............................................................................................................................................................................2480.13100000001000000000
.................................................................................................................................................................................AACACAAGCCAAC-GGACTAGAACA----GTT...........................................................................................................................................................................2780.13100100000000000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAAC----................................................................................................................................................26160.13200000020000000000
............................................................................................................................................................................................................................................................................................................................AGCATATTTGCGTGGCCGCTGCGA........................................24160.13200010000010000000
...............................................................................................................................................................................................................................................................................................................................ATATTTGCGTGGCCGCTGCGA........................................21160.13200000000002000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CAGTGTATGAAT----T...............................................................................................................................................27170.12200000011000000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGCT.........................................25170.12200000010100000000
...................................................................................................................................................................................................................................................................ATC-AAAGTGCTGACC-C.......................................................................................................16170.12200000000002000000
..................................................................................................................................................................................................CTAGAACA----GTTGGCT-------CAGTGTATGA......................................................................................................................................................25170.12200000000200000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGCTGCGT........................................26170.12200000010100000000
.........................................................................................................................................................................................................................................................................................................TGCGCAGCCGGCA-AACACAGCAT...........................................................2390.11100000000001000000
..................................................................................................................................................................................................................................................................................................................................TTTGCGTGGCCGCTGC..........................................16180.11200000000002000000
...........................................................................................................................................................................................................................................................................................................CGCAGCCGGCA-AACACAGCATATTTG......................................................2690.11100000000001000000
......................................................................................................................................................................................................AACA----GTTGGCT-------CAGTGTATG.......................................................................................................................................................20180.11200000000002000000
.........................................................................................................................................................................................................................................................................................TTGGGCCGGAAACCCGTGCG...............................................................................2090.11100000000001000000
........................................................................................................................................................................................................................................................................................ATTGGGCCGGAAACCCGTGCGCAGCC..........................................................................2690.11100000000001000000
..........................................................................................................................................................................................................................................................................................TGGGCCGGAAACCCGTGCGCAGCCG.........................................................................2590.11100000000001000000
...............................................................................................................................................................................................................................................................................................................................ATATTTGCGTGGCCGCT............................................17190.11200000000002000000
.....................................................................................................................................................................................CAAGCCAAC-GGACTAGAACA----GTTGGCA-------................................................................................................................................................................27100.10100000000000010000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGTAC........................................................................................................................................................25100.10100000000000001000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTT...........................................................................................................................................................22100.10100000000010000000
...........................................................................................................................................................................................AAC-GGACTAGAACA----GTTGGCT-------CAAC............................................................................................................................................................25100.10100000000010000000
...........................................................................................................................................................................................................................................................................................................................CAGCATATTTGCGTGGCCGC.............................................20200.10200010001000000000
............................................................................................................................................................................................AC-GGACTAGAACA----GTTGGCT-------CAGTGTAA........................................................................................................................................................28100.10100000010000000000
.......................................................................................................................................................................................AGCCAAC-GGACTAGAACA----GTTGT.........................................................................................................................................................................23100.10100000000001000000
...............................................................................................................................................................................................GGACTAGAACA----GTTGGCT-------CAGTGTA.........................................................................................................................................................25100.10100000000001000000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGG............................................................................................................................................................21100.10100100000000000000
.............................................................................................................................................................................................C-GGACTAGAACA----GTTGGCT-------CAGTGTAA........................................................................................................................................................27100.10100000010000000000
..........................................................................................................................................................................................................................................................................................................................ACAGCATATTTGCGTGGCCGC.............................................21200.10200000010001000000
...................................................................................................................................................................................................TAGAACA----GTTGGCT-------CA..............................................................................................................................................................16200.10200000000002000000
............................................................................................................................................................................................AC-GGACTAGAACA----GTTGGCT-------CAGTA...........................................................................................................................................................25100.10100000000010000000
............................................................................................................................................................................................AC-GGACTAGAACA----GTTGGCT-------CAT.............................................................................................................................................................23100.10100000000000010000
................................................................................................................................................................................................GACTAGAACA----GTTGGCT-------CAGTGTATGAAA----................................................................................................................................................29100.10100000001000000000
dm3
TTAGAAGGTTAA--------------AACAC------------------------------------------------------------------------------GTA-----------------------------------------------------GTTATACAAGTTAACACGGGCCAAC-GAGCTAGACCA----GTTGGCT-------CAGTGCACGAAA----TT--------TAATACCA-TTACGTT-AAAGTGCTGACCCCAGCATCGGGCCGGAAACCCGTGCGCAGCCGGCA-AACACAGCATATTTGCGTGGCCGCTGCGAGTC-----TTTTGTTAGCT-GTAAGAT------------TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................ATACCA-TTACGTT-AAAGTGCT.............................................................................................................2120116.75233500000000000000000000000000000000000001000000001201120000001000000000000000000011000000000000000000000000000000000000000000000000000000000000000001607070028000000000000000000000001000000000113000000000000000000000003000204000100000000000000000000000000000000000000200000015093701935930001000000000106721851159000000000000000300100000000000000
..............................................................................................................................................................................................................GTTGGCT-------CAGTGCACGAAA----TT--------......................................................................................................................................2120110.15220300000000000000000000000000000000000000002000003210121000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000413142000000000000000000000000000000000000000300100000000010000000000006000200100000000000010000000000000000000000000000000010870103956040000000000000008226456238000000000000000000000000000800000
.................................................................................................................................................................................AACACGGGCCAAC-GAGCTAGA.....................................................................................................................................................................................212095.1519030000000000000000000000000000000001002010000000012030300002100000000000000000039400000000000000000000000000000000000000000000000000210000000000000465111050000000000000000000000000000000000001001100000000000120030100000207250116430015000000000000000000000000000000000000020000020869009600000000000000007001095040000000000000003000000000105200000
.........................................................................................................................................................................................................................................................TACCA-TTACGTT-AAAGTGCTG............................................................................................................212090.251805000000000000000000000000100000000000100010000024454234300001000000000000000000642000000000000000000000000000000001001000000000000000000000000000009291052715100600000000000000000000000000000000000250000100000033000100000886113400120430000000000000000000000000000000100000500000016444213803080000000000000109301062160000000511000005001000000003900000
..................................................................................................................................................................................ACACGGGCCAAC-GAGCTAGAC....................................................................................................................................................................................212079.65159300000000000000000000000000000000000013001000000100000000003000000000000000000121000000000000000000000000000000000000000000003000000000000000000001212100000000000000000000000000000000000000000300000200000000000000000105304160000000000000000000000000000000000000000000000019010021300000000000000001262348980000000030000001000000000005000000
.....................................................................................................................................................................................................GACCA----GTTGGCT-------CAGTGCACG.......................................................................................................................................................212064.60129200000000000000000000000000000000000000000000001000120000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000200200000000000000000000000000000000000000002000000300000020000000002005104120000000000000000000000000000000000000000000000003200025181000000000000020401291184141000000400000000001000000002600000
...................................................................................................................................................................................CACGGGCCAAC-GAGCTAGACC...................................................................................................................................................................................212060.4012080000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000000000000000000000000000000000000100000000020000000000120100000000000000000000000000000000000000000000000000000000000000000100050103252000000000000000000000000000000100000030000117632701743120000000000000000145531560000000000000004000000000002600000
...................................................................................................................................................................................................TAGACCA----GTTGGCT-------CAGTGCA.........................................................................................................................................................212051.75103500000000000000000000000000000000000000001000000000210000000000000000000000000500000000000000001020000000000000000000000000000000001010000001001000232100002000000000000000000000000000000000000000000000000320000000001100622021719316000000000000100000000000000000000000000000000613280057357000000000000000002568000000000200000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTGCGTGGCCGCTGCGAGTC-----T...............................212044.7089400000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000001001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062287000423000000000000000902681000000000000000000000000000000000
.........................................................................................................................................................................................................A----GTTGGCT-------CAGTGCACGAAA----T...............................................................................................................................................212044.40888000000000000000000000000000000000000000000000000001020000000000000000000000000213000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061000000401000000000000000000000000000000000000001000000904800015000000000000000007057148000000000000000000000000000600000
..........................................................................................................................................................................................................................................................ACCA-TTACGTT-AAAGTGCTGA...........................................................................................................212044.358870000000000000000000000000000000000000000000000000013000000000000000000000000052310000000000000000000000000000000000000000000000000000000000000000001436000000000000000000000000000000000000000020000000000000000000000300100010000000000000000000000000000000000000000040000014129900181180000000000000002380581790000000200000002000000000002600000
................................................................................................................................................................................TAACACGGGCCAAC-GAGCTAG......................................................................................................................................................................................212044.058810000000000000000000000000000000000003210300000103001340000000000000000000000002001000000000000000000000000000000000000000000000000033000000000000041111142300100000000000000000000000000000000013025000002001000300100000003014300144444291600000000000000000000000000000010000000000000328100014600001000000000047114321170000000601000004000000000003800000
..................................................................................................................................................................................................................................................................................................................................TTTGCGTGGCCGCTGCGAGTC-----................................212041.6083200000000000000000000000000000000000000000000000010000000000000000000000000000402000000000000000000000000000000000000000000001000000000000000000002400010000000000000000000000000000000000000001000000000000000000000000001300000130000000000000000000000000000000000000000000001124690010300000100000000002705000001000001000000100000000003400000
...............................................................................................................................................................................TTAACACGGGCCAAC-GAGCTA.......................................................................................................................................................................................212034.156830000000000000000000000000000000000002011000000000120000000000000000000000000044210000000000000000000000000000000000000000000000000100000000000000143352003000000000000000000000000000000000001230000000000001000000000010460410052000000000000000000000000000000000000000000000139014826600000000000000028773000000001100000003000000000001900000
..............................................................................................................................................................................GTTAACACGGGCCAAC-GAGCT........................................................................................................................................................................................212032.7065400000000000000000000000000000000000002001000000003101100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000003119007100300000000000000000000000000000000000490000000000006050100000122016920411618700000000000000000000000000000000000001000000702001530000100000000102112097000000002000000012001000001007900000
........................................................................................................................................................................................................CA----GTTGGCT-------CAGTGCACGAAA----................................................................................................................................................212029.5559100000000000000000000000000000000000011000000000210000000000000000000000000000200000000000000000000000000000000000000000000010000000000000000000000020000000000000000000000000000000000000000010100000000000310000000005000001000000000000000000000000000000000000000000100000058304007000000000000000042001650000000000000000000000000001000000
........................................................................................................................................................................................................CA----GTTGGCT-------CAGTGCACGAA.....................................................................................................................................................202026.705340000000000000000000000000000000000000000000000120100000000000000000000000000020100000000000000000000000000000000000000000000000000000100000000000000010000100000000000000000000000000000000000100000000000000000000000401100200000000000000000000000000000000000000000000000040780259331000000000000000001126000000000000000000000000000400000
................................................................................................................................................................................................AGCTAGACCA----GTTGGCT-------CAGT............................................................................................................................................................212024.9549900000000000000000000000000000000000000000000000000011000000000000000000000000222200000000000000000000000000000000000000000000000001000000000000002001000000000000000000000000000010000000000000600000000000100010000000000006130000000000000000000000000000000000000000100000000004024800000000000000021921442000000000000000000000000000800000
..............................................................................................................................................................................................................................................................................TGACCCCAGCATCGGGCCGGA.........................................................................................212023.8547700000000000000000000000000000000000010001000000010300000014000000000000000000262019400000000000000000000000000000000000000000000000000100000000000001102030000000000000000000000000000000000000000500000000000020000400000000304115047000000000000000100000000000000000000020000001654003413400000000000000023246130000000000000002000000000003500000
...............................................................................................................................................................................TTAACACGGGCCAAC-GAGCTAG......................................................................................................................................................................................222021.504300000000000000000000000000000000000000100000000101000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000201030000000000000000000000000000002000000030100000000000000000000000000416130001120000000000000000000000000000000000000000000032140011069000000000000000122413580000001000000012000000000001400000
...................................................................................................................................................................................CACGGGCCAAC-GAGCTAGAC....................................................................................................................................................................................202019.45389000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000130035327600000000000000032040000000000000000000000000000100000
................................................................................................................................................................................TAACACGGGCCAAC-GAGCTAGA.....................................................................................................................................................................................222018.8537700000000000000000000000000000000000010000000000000000000002000000000000000000021100000000000000000000000000000000000000000000000000010000000000000313200000000000000000000000000000000000000000500000310000010000000003200503000460000000000000000000000000000000000000000000033109000670000000000000002702170000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................ATTTGCGTGGCCGCTGCGAGT......................................212018.55371000000000000000000000000000000000000100010000011310100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000003000000000000001000000020118100000000000000000000000000000000000000000000000000101020037142000000000000010012270000000020000000000000002000000000
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...............................................................................................................................................................................................................................................................................GACCCCAGCATCGGGCCGGAAACCCGT..................................................................................27200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000200000000000000000000000000000000000000000000000000002010008000000000100000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................ACGAAA----TT--------TAATACCA-TTACGT.......................................................................................................................22200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120600230000000000000000210000000000000000000000000000000000
................................................................................................................................................................................TAACACGGGCCAAC-GAGC.........................................................................................................................................................................................18200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000100000000000000000000000000000000000000000000000000000513500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CTAGACCA----GTTGGCT-------CAGTGCA.........................................................................................................................................................22200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100004004000000000000000000000000000000000000000000001300120000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................TAGACCA----GTTGGCT-------CAGTGCACGAAT----................................................................................................................................................26200.851700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CGAAA----TT--------TAATACCA-TTACGTT-.....................................................................................................................22200.85170000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400010000000000000004123000000000000000000000000000000000
........................................................................................................................................................................ATACAAGTTAACACGGGCCAAC-GAGC.........................................................................................................................................................................................2660.8350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100010001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CACGGGCCAAC-GAGCTAGACCA----GTTG..........................................................................................................................................................................26200.80160000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010100000200010300120000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000100000000
...........................................................................................................................................................................................AAC-GAGCTAGACCA----GTTGGCT-------A...............................................................................................................................................................22200.80160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003300050000000000000000104000000000000000000000000000000000
droEug1
AGAGTAAAAGGG--------------TATATTA-----GA------------------------------------------------------------------------TTCGTTGAAAAGTATGTAACAGGTAGAATGAAGT---------------ATAT-----ATAAGTTAACTA-AGTCAACCGGGCGACGG--CAAT---GACCGACTGTC-------C----GAGAGT--------TC-----GCTCCGGCC-AAATTGCTGACA-CAGCGTCTGGCCGGAAGCCCGTGCATAGCCGGCA-AGCACTACCCATTGGAGTGGCCGCTATGATTCTCTTTTCATGTTAGCT-TTAAGT-------------TSizeHit CountTotal NormTotal
No Reads
droBia1
GTGAT----------------------CTGGTG-----TTTATACCCGTTATCTACGA---GTAAAAGGGTAT-------ACTAGA--------------------------ATTGTCGGAAAGTATGTAAAAGGTAGAAGGAAGCGTTTCCGACCCCGTAAAGT-----ATAAGTTAACTGAAGTTAACCAAGCAGCGG--CAAT---GTCCGATTATT-------T----AAGAGT--------TC-----GCTCTGGCC-AAACTGCTGACA-TAGCGTCTGGCCGGAAGCCCATGCATAG-CGGCA-AGCACTGCACATTTGCGTGGCCGCTATGAAATAC--TTTTTGTTAGCT-TTAAGTT------------TSizeHit CountTotal NormTotal
No Reads
droTak1
GCATTCATT-------AG------------------------------AGGCTTAGAAGGA----------------------------------------GACAA---ATA-----------------------------------------------------TATATACAAGTTAACTGTGGTCAACCCGATCAAGAT-C---GTTGACCG------CAGTTA----------CTTCGAAAATAA-----GCTCCGGCCGAAATTGCTGACC-TAGCAATGGGCCGGAAGCTCGTGCACAG-CGGCA-GACACTGCATATTTGCGTGGCCGCTGTGAGC------TTTTGTTAGCT-CTAAGTTTTGTCTTTAAGAASizeHit CountTotal NormTotal
No Reads
droEle1
TTAACATATG---------CAA----ATAGCCC-----TTAA---------------------------------------------------------------------------------------------------------------------------CATATGTAAGTTAACTGTGGCCAGCCGAACTAAAGT-C---GTTGACCA------CAGTTTACGTAAACAACT--------TC-----GCTCCGGCC-AAATTGCTGACC-ATGCAATGAGGCGGATGCTCGTGCGCGGACGGCA-AACACTGCATATTTGCGTGGCCGCTGCGAGCC------TCCGTTAGCT-TTAAGTCAATCCCT-----TSizeHit CountTotal NormTotal
No Reads
droRho1
AAATGTATACAG-TCG---CA---------------------------------------------------------------------------------TCAAT-TCGC-----------------------------------------------------CATATATAAGTTAACTA-AGTTAACCGAGCGACGG--CAAT---GACCGATCGTT-------C----GACAGC--------TC-----GCTCCGGCC-AAACTGCTGACA-CAGCGTCTGGCCTGATACCCATGCATAGCCGGCA-AACACAGCATATTTGCGTGTCCGCTATGATATCAAATTTTTGTTAGCT-TTAAGTT------------TSizeHit CountTotal NormTotal
No Reads
droFic1
AAAAATAAGG----------------TATT-TT-----ATAAAATAAAAAAA---------------------------------------------------------ATA-----------------------------------------------------TATATATAAGTTAACTA-AGTTAACCGGGCGACGG--CAAT---GACCGATCGTC-------C----GAAAGC--------TC-----GCTCCGGCC-AAATTGCTGAAA-CAGCGTCTGGCCGGAAGCCCGTGCATAGCCGGCA-AGCACTACCCATTGGAGTGGCCGCTATGAATCCCTTTTTATGTTAGCT-TTAAGT-------------TSizeHit CountTotal NormTotal
No Reads
droKik1
ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAAGTTAACTGTGGTCAGCCAGACCAGAGT-C---GTTGACCA------TAGTCAACA--T----TA--------TAATAACGCTCCGGCC-AAACTGCTGACC-CAGCAATGGGCCGGATGCTCGTGCACACCCGGCA-GACACTGCATATTTGCGTGGCCGCTGTGAGTT------TTTGTTAGCT-ATAAGTTTATTCTTTATATTSizeHit CountTotal NormTotal
No Reads
droAna3
TATAGTATGGAAT---AGAAAGGCAGAAC---ATAACAGGGATTTT--------------------------------------------------------CCATTGTACT-----------------------------------------------------TATACGTAAGTTAACTA-AGTCAACCGGGCGACGG--CAAT---GACCGATCGTC-------C----GAAAGC--------TC-----GCTCCGGCC-AAATTGCTGACC-CAGCGTCTGACCGGAAGCTCGTGCATAGCCGGCA-AGCACTGCCCATTGGAGTGGCCGCTATGAGTCTCA-CTTTTGTTAGTT-CTTAAGT------------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................TACGTAAGTTAACTA-AGTCAACCGGGC.........................................................................................................................................................................................2711.001010000
............T---AGAAAGGCAGAAC---ATAACAGGGATT................................................................................................................................................................................................................................................................................................................................................26200.255131000
.........................GAAC---ATAACAGGGATTTT--------------------------------------------------------CCATTGTA..............................................................................................................................................................................................................................................................................2660.171100000
......................GCAGAAC---ATAACAGGGATTTT--------------------------------------------------------CCATTG................................................................................................................................................................................................................................................................................2760.171100000
.........................GAAC---ATAACAGGGATTTT--------------------------------------------------------CCATTGT...............................................................................................................................................................................................................................................................................2560.171010000
..........................AAC---ATAACAGGGATTTT--------------------------------------------------------CC....................................................................................................................................................................................................................................................................................1960.171010000
............T---AGAAAGGCAGAAC---ATAACAGGGAT.................................................................................................................................................................................................................................................................................................................................................25200.153030000
............................................................................................................................................................................AAGTTAACTA-AGTCAACCGGGCGA.......................................................................................................................................................................................24200.102110000
.....................................................................................................................................................................................................................GATCGTC-------C----GAAAGC--------TC-----GCTCCGG........................................................................................................................23200.102200000
.................................................................................................................................................................................................................GACCGATCGTC-------C----GAAAGC--------TC-----GCTCC..........................................................................................................................25200.051100000
................................................................................................................................................................................TAACTA-AGTCAACCGGGCGACGG--C.................................................................................................................................................................................24200.051100000
............................................................................................................................................................................................................AT---GACCGATCGTC-------C----GAAAGC--------TC-----GCT............................................................................................................................25200.051010000
............................................................................................................................................................................................................AT---GACCGATCGTC-------C----GAAAGC--------TC-----GCTCC..........................................................................................................................27200.051100000
...................................................................................................................................................................................................................................................................................................AGCTCGTGCATAGCCGGCA-AGCA.................................................................23200.051001000
...................................................................................................................................................................................................................................................................................................AGCTCGTGCATAGCCGGCA-AGCACT...............................................................25200.051100000
..................................................................................................................................................................................................................................................................................................................................TTGGAGTGGCCGCTATGAGTCTCA-CT...............................26200.051100000
......................................................................................................................................................................................................................ATCGTC-------C----GAAAGC--------TC-----GCTCCGG........................................................................................................................22200.051100000
.................GAAAGGCAGAAC---ATAACAGGGAT.................................................................................................................................................................................................................................................................................................................................................23200.051010000
..............................................................................................................................................................................GTTAACTA-AGTCAACCGGGCGACGG--C.................................................................................................................................................................................26200.051100000
............................................................................................................................................................................................................AT---GACCGATCGTC-------C----GAAAGC--------TC-----GC.............................................................................................................................24200.051100000
.............................................................................................................................................................................................................................................................................................................................GCCCATTGGAGTGGCCGCTATGAGTCT....................................27200.051100000
...................................................................................................................................................................................................GACGG--CAAT---GACCGATCGTC-------C----GAAAGC--------......................................................................................................................................27200.051010000
.....................................................................................................................................................................................................................................................................................................CTCGTGCATAGCCGGCA-AGCACTGCC............................................................26200.051100000
.................GAAAGGCAGAAC---ATAACAGGGATT................................................................................................................................................................................................................................................................................................................................................24200.051100000
droBip1
ATAGTTATAACA--------------CAAAATATATTAATGGTTATAATGATTTTA--------------------------------------------------------------------------------------------------------------GAATATAAGTTAACTGAAGTTAACGGCGCAGCGG--CAAT---GTCCGATTATT-------T----AAGAGC--------TC-----GCTCTGGCC-AAACTGCTGACA-CAGCGTCTGGCCGGATGCCCATACGTAG-CGGCG-AGCACTGCATATTTGCGTGGCCGCTATGAAATAA--GTTTTGTTAGCT-TTAAGTT------------TSizeHit CountTotal NormTotal
No Reads
dp5
TACGAAAAATGA--------------TCCACTA-----GTCAATAAACAGGACTGGGAGGAAGAACTAAGTA--------------------------------------------------------------------------------------------------ATAAGTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................AACAGGACTGGGAGGAAG.............................................................................................................................................................................................................................................................................................................................1812.0020000000200
............................................AAACAGGACTGGGAGGAAG.............................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................................ACAGGACTGGGAGGAAGAACTAAC......................................................................................................................................................................................................................................................................................................................2411.0010001000000
..............................................ACAGGACTGGGAGGAAGAA...........................................................................................................................................................................................................................................................................................................................1911.0010000000100
.........................................AATAAACAGGACTGGGAGGAAGAACT.........................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................................AATAAACAGGACTGGGAGG................................................................................................................................................................................................................................................................................................................................1911.0010000000100
droPer2
TACGAAAAACGA--------------TCCACTA-----GTCAATAAACAGGACTGGGAGGAAGAACTAAGTA--------------------------------------------------------------------------------------------------ATAAGTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................CAATAAACAGGACTGGGAGGAA..............................................................................................................................................................................................................................................................................................................................2211.001100000
............................................AAACAGGACTGGGAGGAAGAACTAAC......................................................................................................................................................................................................................................................................................................................2611.001010000
droWil2
TTCCATATGTGA--------------TAAACTA-----ATTAAATACGTCGACTGGGAAGAGGAGCAAGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................TTAAATACGTCGACTGGGAA.................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
AAATTATTT--------------------------------AAGTGATCAATCTAT-----------------------------------------------------GTA-----------------------------------------------------TGTATATAAGTTAAGCGGAGTCAAC-G------AACA----GTTGGC---------------C----AGACTA--------TG-----ACTCCGAACACAATTGCTGAAT-AAGCATTGGGCTGGATGTCGTTGCATTGCCGGCA-GACACAGCATATTTGCGTGGCCGCTATGA----------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................A--------TG-----ACTCCGAACACAATTGCT.............................................................................................................2120.501000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CAATTGCTGAAT-AAGCATTGGGCTGGA.........................................................................................2740.251001000000000000000000000000000000000000000000000000000000000000
.......TT--------------------------------AAGTGATCAATCTAT-----------------------------------------------------GTA-----------------------------------------------------TGTATA.................................................................................................................................................................................................................2640.251000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CGTTGCATTGCCGGCA-GACACATT.............................................................2440.251000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................CGTTGCATTGCCGGCA-GACACAGCATC..........................................................2740.251001000000000000000000000000000000000000000000000000000000000000
...............................................TCAATCTAT-----------------------------------------------------GTA-----------------------------------------------------TGTATATAAGTTAAGC.......................................................................................................................................................................................................2840.251000000000000000000000000010000000000000000000000000000000000000
.......................................................T-----------------------------------------------------GTA-----------------------------------------------------TGTATATAAGTTAAGCGGA....................................................................................................................................................................................................2340.251001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CGTTGCATTGCCGGCA-GACACAGC.............................................................2440.251001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TATAAGTTAAGCGGAGTCAAC-C------T.....................................................................................................................................................................................2370.141001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CGGCA-GACACAGCATATTTGC.....................................................2190.111001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTCGAAATGTGA--------------TAAACTT-----ATAAAATATTCCGTCTGGGAACAGGAGCAAGGTA-----------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTCGCAATGTGA--------------TAAACTT-----ATAAAATATTCCGACTGGGAGCAGGAGCAGGGTA-----------------------------------------------------------------------------------------------------AGTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-TAACGATTCATGTTT----TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:04 AM