ID:

dya_1

 Coordinate:

3L:22973880-22973948 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.9 -30.8 -30.8

Flybase annnotation

utr3 [utr3_minus_6531]

No Repeatable elements found

mature

  1. dya_2  3L:22972000-22972021 -
  2. dya_1  3L:22973881-22973902 -
star

  1. dya_2  3L:22972045-22972067 -
  2. dya_1  3L:22973926-22973948 -

Sense Strand Reads

GTCTGTTCATCCAAGAATATATCATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGTGAGCAACTATCCAAACAGCGATACCAACGAGCGCGTC

***********************************.((((((((.....((((((((((.((((.((((((((......((((......)))).)))))))))))).)))))))))).....)))).))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total M026

head

 V058

head

 V052

head

 M043

female body

 V120

male body		 M056

embryo

 V046

embryo

 SRR1275484

Male prepupae		 SRR1275488

Male larvae
................................................................................................TGAAACCGTCCAAAACTGAGGC................................................... 22 0 2 49250.50 98501 81795 10461 3337 962 906 993 41 4 2
................................................................................................TGAAACCGTCCAAAACTGAGG.................................................... 21 0 2 11481.50 22963 9843 8336 2611 1012 1134 25 2 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCT.................................................. 23 1 2 2394.00 4788 4466 217 58 32 12 3 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGAC................................................... 22 1 2 1099.50 2199 2151 13 3 0 2 30 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAG..................................................... 20 0 2 938.50 1877 1184 451 124 58 60 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGA...................................................... 19 0 2 593.00 1186 1124 37 16 9 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCC.................................................. 23 0 2 492.00 984 947 21 11 2 1 2 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCA.................................................. 23 1 2 304.00 608 233 260 78 22 15 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCTT................................................. 24 2 2 268.00 536 508 20 6 2 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTG....................................................... 18 0 2 192.00 384 383 0 0 1 0 0 0 0 0
................................................................................................TTAAACCGTCCAAAACTGAGGC................................................... 22 1 2 187.50 375 71 6 0 1 0 297 0 0 0
................................................................................................TGAAACCGTCCAAAACTGCGGC................................................... 22 1 2 156.50 313 188 117 8 0 0 0 0 0 0
.................................................................................................GAAACCGTCCAAAACTGAGGC................................................... 21 0 2 137.00 274 189 3 5 76 0 1 0 0 0
................................................................................................TGAAACCGTCCAAACCTGAGGC................................................... 22 1 2 120.00 240 3 220 12 0 2 3 0 0 0
................................................................................................TGAAACCGTCCCAAACTGAGGC................................................... 22 1 2 115.00 230 96 94 39 0 0 1 0 0 0
................................................................................................TGAAACCGTCCAACACTGAGGC................................................... 22 1 2 105.00 210 2 181 25 0 1 0 1 0 0
................................................................................................TGAAACCGTCCAAACCTGAGG.................................................... 21 1 2 102.00 204 0 192 9 0 3 0 0 0 0
................................................................................................TGAAACCGTCCACAACTGAGGC................................................... 22 1 2 100.50 201 2 169 22 0 2 6 0 0 0
................................................................................................TGAAACCGTCCAAAACTGCGG.................................................... 21 1 2 97.00 194 21 163 8 0 2 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGG...................................................... 19 1 2 94.00 188 188 0 0 0 0 0 0 0 0
................................................................................................TGAAACCGCCCAAAACTGAGGC................................................... 22 1 2 92.50 185 131 33 2 11 0 8 0 0 0
................................................................................................TGAAGCCGTCCAAAACTGAGGC................................................... 22 1 2 90.50 181 149 23 8 0 0 1 0 0 0
................................................................................................TGAAACCGTCCAACACTGAGG.................................................... 21 1 2 88.50 177 0 165 12 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAGCTGAGGC................................................... 22 1 2 73.50 147 103 33 9 1 0 1 0 0 0
................................................................................................TGAAACCGTCCCAAACTGAGG.................................................... 21 1 2 71.50 143 15 90 38 0 0 0 0 0 0
................................................................................................TGAAACCGTCCACAACTGAGG.................................................... 21 1 2 69.50 139 0 121 15 0 3 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGT................................................... 22 1 2 68.50 137 57 54 17 3 5 1 0 0 0
................................................................................................TGAAACCGGCCAAAACTGAGGC................................................... 22 1 2 67.50 135 19 74 9 33 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCG.................................................. 23 1 2 67.00 134 120 8 5 0 0 1 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGG................................................... 22 1 2 63.50 127 119 2 3 3 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGA................................................... 22 1 2 63.00 126 45 54 15 6 1 5 0 0 0
................................................................................................TGAAACCGTCCAAAACTGGGGC................................................... 22 1 2 60.50 121 100 18 2 0 0 1 0 0 0
................................................................................................TGAAACCGTCCAAGACTGAGGC................................................... 22 1 2 55.00 110 80 23 6 0 0 0 1 0 0
................................................................................................TGAAACCGGCCAAAACTGAGG.................................................... 21 1 2 52.00 104 4 52 6 42 0 0 0 0 0
................................................................................................TGAAACCGTCCATAACTGAGG.................................................... 21 1 2 50.00 100 1 85 14 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGTC................................................... 22 1 2 46.00 92 8 68 12 0 2 2 0 0 0
..................................................................................................AAACCGTCCAAAACTGAGGC................................................... 20 0 2 45.00 90 80 1 1 8 0 0 0 0 0
................................................................................................TGAAACCGTCCATAACTGAGGC................................................... 22 1 2 43.50 87 2 73 12 0 0 0 0 0 0
................................................................................................TCAAACCGTCCAAAACTGAGGC................................................... 22 1 2 43.00 86 70 6 0 1 1 8 0 0 0
.................................................................................................GAAACCGTCCAAAACTGAGG.................................................... 20 0 2 42.50 85 12 5 1 66 1 0 0 0 0
................................................................................................TAAAACCGTCCAAAACTGAGGC................................................... 22 1 2 38.50 77 49 11 2 1 1 13 0 0 0
................................................................................................CGAAACCGTCCAAAACTGAGGC................................................... 22 1 2 38.50 77 44 21 7 0 3 2 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGCC................................................... 22 1 2 32.50 65 21 34 2 0 6 2 0 0 0
................................................................................................TGAAACCATCCAAAACTGAGGC................................................... 22 1 2 31.00 62 52 7 3 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTCAGGC................................................... 22 1 2 30.00 60 24 31 3 0 2 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTAAGGC................................................... 22 1 2 30.00 60 35 20 2 0 2 1 0 0 0
................................................................................................TGAAACCGTCCAAAACTGATGC................................................... 22 1 2 28.00 56 8 38 8 0 0 2 0 0 0
................................................................................................TGGAACCGTCCAAAACTGAGGC................................................... 22 1 2 27.00 54 31 18 2 1 0 2 0 0 0
................................................................................................TGAAACCGTCCAAAGCTGAGG.................................................... 21 1 2 27.00 54 12 33 5 2 2 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAC..................................................... 20 1 2 25.50 51 50 0 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCGAAACTGAGGC................................................... 22 1 2 25.00 50 10 37 3 0 0 0 0 0 0
................................................................................................TGAAACAGTCCAAAACTGAGGC................................................... 22 1 2 25.00 50 36 13 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTCAGG.................................................... 21 1 2 24.00 48 0 38 3 0 7 0 0 0 0
................................................................................................TGAAACCGCCCAAAACTGAGG.................................................... 21 1 2 23.50 47 15 19 4 6 3 0 0 0 0
...............................................................................................CTGAAACCGTCCAAAACTGAGGC................................................... 23 1 2 23.50 47 16 22 4 1 3 1 0 0 0
................................................................................................TGAGACCGTCCAAAACTGAGGC................................................... 22 1 2 23.50 47 18 23 5 1 0 0 0 0 0
................................................................................................TGAAACCGTCCAAGACTGAGG.................................................... 21 1 2 23.50 47 29 10 5 1 2 0 0 0 0
................................................................................................TGAAACCGTCTAAAACTGAGGC................................................... 22 1 2 23.50 47 15 9 23 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGACG.................................................... 21 1 2 23.50 47 10 24 12 0 1 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGT.................................................... 21 1 2 22.00 44 4 37 3 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGATG.................................................... 21 1 2 21.00 42 6 25 9 0 2 0 0 0 0
................................................................................................TGAAACCGACCAAAACTGAGG.................................................... 21 1 2 21.00 42 2 16 0 23 1 0 0 0 0
................................................................................................TGAAACCGTCCAGAACTGAGGC................................................... 22 1 2 20.50 41 14 21 4 0 2 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTTAGGC................................................... 22 1 2 20.00 40 27 8 0 0 4 1 0 0 0
................................................................................................TGAAACCGTCCAAAACTGACGC................................................... 22 1 2 19.50 39 12 22 5 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACCGAGGC................................................... 22 1 2 19.50 39 16 16 4 0 2 1 0 0 0
................................................................................................TGGAACCGTCCAAAACTGAGG.................................................... 21 1 2 19.00 38 5 28 5 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGTGG.................................................... 21 1 2 18.50 37 19 18 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAAATGAGGC................................................... 22 1 2 18.50 37 6 24 6 0 1 0 0 0 0
................................................................................................TGATACCGTCCAAAACTGAGGC................................................... 22 1 2 18.00 36 4 1 0 0 0 31 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGA.................................................... 21 1 2 18.00 36 9 19 5 2 1 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGC.................................................... 21 1 2 18.00 36 13 22 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCGAAACTGAGG.................................................... 21 1 2 17.00 34 4 23 7 0 0 0 0 0 0
................................................................................................TGAAGCCGTCCAAAACTGAGG.................................................... 21 1 2 17.00 34 15 14 3 1 1 0 0 0 0
................................................................................................TGAAACTGTCCAAAACTGAGGC................................................... 22 1 2 16.00 32 19 10 3 0 0 0 0 0 0
................................................................................................TGAAACCGACCAAAACTGAGGC................................................... 22 1 2 15.50 31 7 9 1 14 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACCGAGG.................................................... 21 1 2 15.00 30 2 20 6 0 2 0 0 0 0
................................................................................................TGAAACAGTCCAAAACTGAGG.................................................... 21 1 2 15.00 30 7 19 4 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACGGAGGC................................................... 22 1 2 15.00 30 2 26 2 0 0 0 0 0 0
................................................................................................TGAAACCGTCAAAAACTGAGGC................................................... 22 1 2 14.50 29 12 16 0 0 0 1 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCCT................................................. 24 1 2 14.00 28 25 3 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGTGGC................................................... 22 1 2 13.50 27 9 14 3 1 0 0 0 0 0
................................................................................................CGAAACCGTCCAAAACTGAGG.................................................... 21 1 2 13.50 27 3 20 3 0 1 0 0 0 0
................................................................................................TGAAACCGTTCAAAACTGAGGC................................................... 22 1 2 13.00 26 11 10 3 0 1 1 0 0 0
..................................................CTTAGTTTTCGACGTGTTTTGGT................................................................................................ 23 0 2 13.00 26 4 7 7 2 1 3 2 0 0
................................................................................................TTAAACCGTCCAAAACTGAGG.................................................... 21 1 2 13.00 26 8 6 1 0 2 9 0 0 0
................................................................................................TGAAACCGTCTAAAACTGAGG.................................................... 21 1 2 13.00 26 1 4 20 0 1 0 0 0 0
................................................................................................TGAAACCGTACAAAACTGAGGC................................................... 22 1 2 12.50 25 9 13 3 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGGGG.................................................... 21 1 2 12.50 25 11 14 0 0 0 0 0 0 0
................................................................................................GGAAACCGTCCAAAACTGAGGC................................................... 22 1 2 12.00 24 9 6 3 4 0 2 0 0 0
................................................................................................TGAAACCGTCCAGAACTGAGG.................................................... 21 1 2 11.50 23 2 20 1 0 0 0 0 0 0
................................................................................................TGCAACCGTCCAAAACTGAGGC................................................... 22 1 2 11.50 23 6 9 0 0 0 8 0 0 0
................................................................................................TAAAACCGTCCAAAACTGAGG.................................................... 21 1 2 11.50 23 9 8 4 0 2 0 0 0 0
................................................................................................TGAAACCTTCCAAAACTGAGG.................................................... 21 1 2 11.50 23 14 8 0 0 0 1 0 0 0
................................................................................................TGAAATCGTCCAAAACTGAGGC................................................... 22 1 2 11.50 23 17 4 1 0 1 0 0 0 0
................................................................................................AGAAACCGTCCAAAACTGAGGC................................................... 22 1 2 11.00 22 6 8 4 3 0 1 0 0 0
...................................................................................................AACCGTCCAAAACTGAGGC................................................... 19 0 2 11.00 22 22 0 0 0 0 0 0 0 0
................................................................................................TGAAACCATCCAAAACTGAGG.................................................... 21 1 2 11.00 22 4 12 6 0 0 0 0 0 0
...............................................................................................CTGAAACCGTCCAAAACTGAGG.................................................... 22 1 2 10.50 21 5 12 3 1 0 0 0 0 0
................................................................................................TGAGACCGTCCAAAACTGAGG.................................................... 21 1 2 10.00 20 4 13 3 0 0 0 0 0 0
................................................................................................TGACACCGTCCAAAACTGAGGC................................................... 22 1 2 10.00 20 1 15 4 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAAGC................................................... 22 1 2 10.00 20 13 2 4 0 0 1 0 0 0
................................................................................................TGAAACCGTCCAAAACTAAGG.................................................... 21 1 2 10.00 20 3 12 2 1 2 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCTC................................................. 24 2 2 9.50 19 17 0 1 1 0 0 0 0 0
................................................................................................TGAAACCGTCCAATACTGAGGC................................................... 22 1 2 9.50 19 0 17 2 0 0 0 0 0 0
................................................................................................TGAAACCGTCCACAACTGCGG.................................................... 21 2 2 9.50 19 0 18 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAACACTGCGG.................................................... 21 2 2 9.50 19 0 16 3 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTTAGG.................................................... 21 1 2 9.50 19 0 9 3 2 5 0 0 0 0
................................................................................................TGAAACCGTCCTAAACTGAGGC................................................... 22 1 2 9.00 18 4 13 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCACACCTGAGG.................................................... 21 2 2 9.00 18 0 17 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAACCTGCGGC................................................... 22 2 2 9.00 18 0 17 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCACACTGAGGC................................................... 22 2 2 8.50 17 0 16 1 0 0 0 0 0 0
................................................................................................TGAAACCTTCCAAAACTGAGGC................................................... 22 1 2 8.50 17 8 3 1 0 3 2 0 0 0
................................................................................................TGAAACCGTCCTAAACTGAGG.................................................... 21 1 2 8.50 17 0 17 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAATTGAGGC................................................... 22 1 2 8.50 17 9 3 1 0 0 4 0 0 0
................................................................................................TGAAACCGTCCAACACTGCGGC................................................... 22 2 2 8.50 17 0 17 0 0 0 0 0 0 0
................................................................................................TGAACCCGTCCAAAACTGAGGC................................................... 22 1 2 8.00 16 9 6 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGAA.................................................. 23 2 2 8.00 16 14 2 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACGGAGG.................................................... 21 1 2 8.00 16 0 16 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGCG..................................................... 20 1 2 8.00 16 7 7 2 0 0 0 0 0 0
................................................................................................TGAAACCGTACAAAACTGAGG.................................................... 21 1 2 8.00 16 3 10 2 0 1 0 0 0 0
................................................................................................TGAAACCGTCCATAACTGAGTC................................................... 22 2 2 8.00 16 0 13 3 0 0 0 0 0 0
................................................................................................TGAAAACGTCCAAAACTGAGGC................................................... 22 1 2 7.50 15 2 11 2 0 0 0 0 0 0
................................................................................................TGAAACCGTCAAAAACTGAGG.................................................... 21 1 2 7.50 15 1 7 4 0 3 0 0 0 0
................................................................................................TGAAACCGTCCCAACCTGAGGC................................................... 22 2 2 7.50 15 0 15 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAAATGAGG.................................................... 21 1 2 7.50 15 1 11 2 0 1 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGAC.................................................. 23 1 2 7.50 15 15 0 0 0 0 0 0 0 0
.................................................................................................TAAACCGTCCAAAACTGAGGC................................................... 21 1 2 7.00 14 14 0 0 0 0 0 0 0 0
................................................................................................TGAAGCCGTCCAAAACTGAGGCT.................................................. 23 2 2 7.00 14 12 2 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCACCACTGAGGC................................................... 22 2 2 6.50 13 0 13 0 0 0 0 0 0 0
................................................................................................TGAAACCGTGCAAAACTGAGGC................................................... 22 1 2 6.50 13 8 3 2 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAACCTGCGG.................................................... 21 2 2 6.50 13 0 13 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGCGGCT.................................................. 23 2 2 6.50 13 11 2 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAATCTGAGGC................................................... 22 1 2 6.50 13 0 11 2 0 0 0 0 0 0
................................................................................................TTAAACCGTCCAAAACTGAGAC................................................... 22 2 2 6.50 13 4 0 0 0 0 9 0 0 0
................................................................................................TGAAACCGTCCAAAACAGAGGC................................................... 22 1 2 6.50 13 5 8 0 0 0 0 0 0 0
................................................................................................AGAAACCGTCCAAAACTGAGG.................................................... 21 1 2 6.50 13 2 8 0 3 0 0 0 0 0
................................................................................................TCAAACCGTCCAAAACTGAGG.................................................... 21 1 2 6.00 12 8 1 1 0 2 0 0 0 0
................................................................................................TGAAACCGTCCACAACTGCGGC................................................... 22 2 2 6.00 12 0 12 0 0 0 0 0 0 0
................................................................................................GGAAACCGTCCAAAACTGAGG.................................................... 21 1 2 6.00 12 1 8 0 3 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCAT................................................. 24 2 2 6.00 12 4 3 1 2 2 0 0 0 0
................................................................................................TGAAACCGTCCCAAACTGAG..................................................... 20 1 2 6.00 12 3 7 2 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAACCCTGAGGC................................................... 22 2 2 6.00 12 0 12 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCATAACTGGGG.................................................... 21 2 2 6.00 12 0 11 1 0 0 0 0 0 0
................................................................................................TGAAACCCTCCAAAACTGAGGC................................................... 22 1 2 6.00 12 6 3 1 1 0 1 0 0 0
................................................................................................TGAAACCGTTCAAAACTGAGG.................................................... 21 1 2 6.00 12 2 6 3 1 0 0 0 0 0
................................................................................................TGAAACCGTCCACACCTGAGGC................................................... 22 2 2 5.50 11 0 11 0 0 0 0 0 0 0
................................................................................................TGAAACTGTCCAAAACTGAGG.................................................... 21 1 2 5.50 11 1 6 3 0 1 0 0 0 0
................................................................................................TGAAACCGTCCCAAACTGCGGC................................................... 22 2 2 5.50 11 0 9 2 0 0 0 0 0 0
................................................................................................TGAAACCGCCCAAAACTGAGGCT.................................................. 23 2 2 5.50 11 10 1 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAA..................................................... 20 1 2 5.50 11 11 0 0 0 0 0 0 0 0
................................................................................................TGAAAGCGTCCATAACTGAGGC................................................... 22 2 2 5.50 11 0 7 4 0 0 0 0 0 0
................................................................................................TGAAGCCGTCCAAAACTGAG..................................................... 20 1 2 5.50 11 8 3 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCACACTGAGG.................................................... 21 2 2 5.50 11 0 10 1 0 0 0 0 0 0
..................................................................................................AAACCGTCCAAAACTGAGG.................................................... 19 0 2 5.50 11 3 3 0 5 0 0 0 0 0
................................................................................................TGAAACCGTCCAAACCTGAG..................................................... 20 1 2 5.50 11 0 10 1 0 0 0 0 0 0
................................................................................................TGGAACCGTCCATAACTGAGGC................................................... 22 2 2 5.00 10 0 7 3 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCTA................................................. 24 1 2 5.00 10 7 2 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTAGGC.................................................... 21 3 2 5.00 10 9 0 0 0 1 0 0 0 0
................................................................................................TGAAAGCGTCCAAAACTGAGGC................................................... 22 1 2 5.00 10 2 8 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCAA................................................. 24 1 2 5.00 10 4 4 1 0 1 0 0 0 0
................................................................................................TGAAACCGTCCAAAGCTGAG..................................................... 20 1 2 5.00 10 5 4 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCACCACTGAGG.................................................... 21 2 2 5.00 10 0 10 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAACACTGAGGCT.................................................. 23 2 2 5.00 10 2 6 2 0 0 0 0 0 0
................................................................................................TGAAACCGGCCAAAACGGAGG.................................................... 21 2 2 4.50 9 0 7 2 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAAG.................................................... 21 1 2 4.50 9 2 3 3 1 0 0 0 0 0
................................................................................................TGAAACCGTCCAATACTGAGG.................................................... 21 1 2 4.50 9 0 8 1 0 0 0 0 0 0
................................................................................................TGAAATCGTCCAAAACTGAGG.................................................... 21 1 2 4.50 9 4 3 1 0 1 0 0 0 0
................................................................................................TGAAACCGTCCATAACTGAGT.................................................... 21 2 2 4.50 9 0 9 0 0 0 0 0 0 0
.................................................................................................GAAACCGTCCAAAACTGAGGCT.................................................. 22 1 2 4.50 9 8 0 0 1 0 0 0 0 0
................................................................................................TGACACCGTCCAAAACTGAGG.................................................... 21 1 2 4.50 9 0 7 2 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAACCCTGAGG.................................................... 21 2 2 4.50 9 0 9 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCCAACTGAGGC................................................... 22 2 2 4.50 9 0 7 2 0 0 0 0 0 0
................................................................................................TGAACCCGTCCAAAACTGAGG.................................................... 21 1 2 4.00 8 1 5 1 0 1 0 0 0 0
................................................................................................TGAAAGCGTCCAAAACTGAGG.................................................... 21 1 2 4.00 8 0 8 0 0 0 0 0 0 0
................................................................................................TGAAACCGCCCAAAACTGAG..................................................... 20 1 2 4.00 8 2 5 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCTTT................................................ 25 3 2 4.00 8 5 2 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGATTC................................................... 22 2 2 4.00 8 0 8 0 0 0 0 0 0 0
................................................................................................TGATACCGTCCGGAACTGAGGC................................................... 22 3 2 4.00 8 0 8 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCACAACTGAG..................................................... 20 1 2 4.00 8 0 7 0 0 1 0 0 0 0
................................................................................................TTATACCGTCCAAAACTGAGGC................................................... 22 2 2 4.00 8 1 0 0 0 0 7 0 0 0
................................................................................................TGAAAGCGTCCATAACTGAGG.................................................... 21 2 2 4.00 8 0 7 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCAAACTGCGG.................................................... 21 2 2 4.00 8 0 7 1 0 0 0 0 0 0
................................................................................................CGAAACCGTCCAAAACTGAGGCT.................................................. 23 2 2 4.00 8 5 3 0 0 0 0 0 0 0
................................................................................................TGAAACCGGCCATAACTGAGGC................................................... 22 2 2 4.00 8 0 7 1 0 0 0 0 0 0
................................................................................................TGAAACCGGCCCAAACTGAGGC................................................... 22 2 2 3.50 7 0 6 1 0 0 0 0 0 0
.................................................................................................GAAACCGTCCAAAACTGAGAC................................................... 21 1 2 3.50 7 7 0 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGACCC................................................... 22 2 2 3.50 7 0 7 0 0 0 0 0 0 0
..............................................................................................TCTGAAACCGTCCAAAACTGAGGC................................................... 24 2 2 3.50 7 1 4 2 0 0 0 0 0 0
................................................................................................TGAAACCCTCCAAAACTGAGG.................................................... 21 1 2 3.50 7 4 3 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCAACCTGAGG.................................................... 21 2 2 3.50 7 0 7 0 0 0 0 0 0 0
...............................................................................................TTGAAACCGTCCAAAACTGAGGC................................................... 23 0 2 3.50 7 6 0 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCAC................................................. 24 2 2 3.50 7 6 0 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAACACTGAG..................................................... 20 1 2 3.50 7 0 6 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGGGGCT.................................................. 23 2 2 3.50 7 6 1 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCTTAACTGAGGC................................................... 22 2 2 3.50 7 0 7 0 0 0 0 0 0 0
................................................................................................TTAAACCGTCCAAAACTGAGGCT.................................................. 23 2 2 3.50 7 4 0 0 0 0 3 0 0 0
................................................................................................TGAAACCGTCCCCAACTGAGG.................................................... 21 2 2 3.00 6 0 1 5 0 0 0 0 0 0
................................................................................................TTCAACCGTCCAAAACTGAGGC................................................... 22 2 2 3.00 6 0 0 0 0 0 6 0 0 0
................................................................................................TGAAACCGTCCATAACTGAG..................................................... 20 1 2 3.00 6 0 6 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCTAACTGAGGC................................................... 22 2 2 3.00 6 0 6 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACAGAGG.................................................... 21 1 2 3.00 6 0 6 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAATACGGAGG.................................................... 21 2 2 3.00 6 0 6 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCAAACTGAGGCT.................................................. 23 2 2 3.00 6 3 2 1 0 0 0 0 0 0
................................................................................................TGAAACCGTGCAAAACTGAGG.................................................... 21 1 2 3.00 6 0 6 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCTG................................................. 24 2 2 3.00 6 5 0 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCTTAACTGAGG.................................................... 21 2 2 3.00 6 0 6 0 0 0 0 0 0 0
................................................................................................TGGAAGCGTCCATAACTGAGGC................................................... 22 3 2 3.00 6 0 5 1 0 0 0 0 0 0
................................................................................................TGAAAACGTCCAAAACTGAGG.................................................... 21 1 2 3.00 6 0 6 0 0 0 0 0 0 0
................................................................................................TGAAACCGGCCAAGACTGAGG.................................................... 21 2 2 3.00 6 0 6 0 0 0 0 0 0 0
................................................................................................TGAAACTGTCCGAAACTGAGGC................................................... 22 2 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAAACCGGCCAAAACGGAGGC................................................... 22 2 2 2.50 5 0 4 1 0 0 0 0 0 0
................................................................................................TGTAACCGTCCAAAACTGAGGC................................................... 22 1 2 2.50 5 1 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGATT.................................................... 21 2 2 2.50 5 0 5 0 0 0 0 0 0 0
..................................................................................................AAACCGTCCAAAACTGAGGCT.................................................. 21 1 2 2.50 5 5 0 0 0 0 0 0 0 0
.................................................................................................TGAACCGTCCAAAACTGAGGC................................................... 21 2 4 2.50 10 8 0 0 0 2 0 0 0 0
................................................................................................TGATACCGTCCGGAACTGAGG.................................................... 21 3 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGACTC................................................... 22 2 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGT...................................................... 19 1 2 2.50 5 5 0 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGC...................................................... 19 1 2 2.50 5 5 0 0 0 0 0 0 0 0
................................................................................................TTAAACCGTCCAAAACTGAGGCC.................................................. 23 1 2 2.50 5 5 0 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCAACCTGCGG.................................................... 21 3 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAAACAGGCCAAAACTGAGG.................................................... 21 2 2 2.50 5 0 3 2 0 0 0 0 0 0
................................................................................................TGAAACCGTCCGGAACTGAGGC................................................... 22 2 2 2.50 5 0 5 0 0 0 0 0 0 0
.................................................................................................GAAACCGTCCAAAACTGAGGCC.................................................. 22 0 2 2.50 5 5 0 0 0 0 0 0 0 0
................................................................................................TGAAACCGACCAAAACTGAG..................................................... 20 1 2 2.50 5 1 3 0 1 0 0 0 0 0
................................................................................................TGGAACCGGCCAAAACTGAGGC................................................... 22 2 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCGGAACTGAGG.................................................... 21 2 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAGCGGAGGC................................................... 22 2 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAAACCGGCCAAAACTGAG..................................................... 20 1 2 2.50 5 0 1 1 3 0 0 0 0 0
................................................................................................TGAAACCGTCCAAACCTGAGGCA.................................................. 23 2 2 2.50 5 0 4 1 0 0 0 0 0 0
................................................................................................TGAAACGGTCCAAAACTGAGGC................................................... 22 1 2 2.50 5 1 3 1 0 0 0 0 0 0
................................................................................................TGACACCGTCCATAACTGAGGC................................................... 22 2 2 2.50 5 0 4 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAGACTGAG..................................................... 20 1 2 2.50 5 3 2 0 0 0 0 0 0 0
................................................................................................TGGAACCGTCCATAACTGAGG.................................................... 21 2 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCATAACTGATG.................................................... 21 2 2 2.50 5 0 4 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACGGCGG.................................................... 21 2 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCACCCTGAGGC................................................... 22 3 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAATCCGTCCAAAACTGAGG.................................................... 21 1 2 2.50 5 0 4 1 0 0 0 0 0 0
..................................................CTTAGTTTTCGACGTGTTTTGG................................................................................................. 22 0 2 2.50 5 1 3 0 0 1 0 0 0 0
................................................................................................TGAAACCGGCCATAACTGAGG.................................................... 21 2 2 2.50 5 0 5 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCGACACTGAGGC................................................... 22 2 2 2.50 5 0 5 0 0 0 0 0 0 0
.................................................................................................GAAACCGTCCAAAACTGAG..................................................... 19 0 2 2.50 5 2 0 0 3 0 0 0 0 0
...................................................................................................AACCGTCCAAAACTGAGG.................................................... 18 0 2 2.50 5 4 0 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCATAACTGATT.................................................... 21 3 3 2.33 7 0 6 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGTGAC................................................... 22 2 4 2.25 9 9 0 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCTAAACTGTGGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGGAACCGTCCATAACTGGGG.................................................... 21 3 3 2.00 6 0 5 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCATAGCTGAGGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
.................................................................................................GAAACCGTCCACAACTGAGGC................................................... 21 1 2 2.00 4 3 0 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAGGCTGAGGC................................................... 22 2 2 2.00 4 2 2 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTTAGTC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGCAACCGTCCAAAACTGAGG.................................................... 21 1 2 2.00 4 0 3 0 0 1 0 0 0 0
................................................................................................TGAAACCGTCCAAGACTGCGGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCATAACTGAGGCT.................................................. 23 2 2 2.00 4 0 3 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAGAACTGAG..................................................... 20 1 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTTAGGCT.................................................. 23 2 2 2.00 4 4 0 0 0 0 0 0 0 0
................................................................................................TGAAAGCGTCCAAAACTGGGGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGACCAAAACTGAGGCT.................................................. 23 2 2 2.00 4 1 1 0 2 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGCGGCC.................................................. 23 1 2 2.00 4 3 0 1 0 0 0 0 0 0
................................................................................................TAAAACCGTCCAAAACAGAGGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGCCCAAAACGGAGG.................................................... 21 2 2 2.00 4 0 3 1 0 0 0 0 0 0
................................................................................................TGAAACCGGCCACAACTGAGGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCATAACTGCGG.................................................... 21 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAACCCGTCCAAACCTGAGG.................................................... 21 2 2 2.00 4 0 3 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCACACTGCGG.................................................... 21 3 3 2.00 6 0 6 0 0 0 0 0 0 0
................................................................................................TGAAACCGCCCCAAACTGAGGC................................................... 22 2 2 2.00 4 3 1 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGTA.................................................. 23 2 2 2.00 4 0 2 1 0 1 0 0 0 0
................................................................................................TGAAACCGGCCAAAACTCAGGC................................................... 22 2 2 2.00 4 0 3 1 0 0 0 0 0 0
................................................................................................TTAAACCGTCCAAAACTGAGGT................................................... 22 2 2 2.00 4 0 2 0 0 0 2 0 0 0
................................................................................................TGAAACCGTCCAAACCTGAGGCT.................................................. 23 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTGCAAAACTGGGGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAATACGGAGGC................................................... 22 2 2 2.00 4 0 3 1 0 0 0 0 0 0
................................................................................................TGAAAGCGTCCATAACTGAGT.................................................... 21 3 2 2.00 4 0 3 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCTTAACTGAGT.................................................... 21 3 2 2.00 4 0 3 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAT..................................................... 20 1 2 2.00 4 0 3 1 0 0 0 0 0 0
................................................................................................TGGAACCGTCCAAAACTGGGGC................................................... 22 2 2 2.00 4 0 3 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCACAACTGAGGCT.................................................. 23 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAACACTGAGGA................................................... 22 2 2 2.00 4 0 3 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCCACCACTGCGGC................................................... 22 3 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAAGCGTCCATAACTGAGTC................................................... 22 3 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCATAACTGGGGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
.................................................................................................GAAACCGTGCAAAACTGAGG.................................................... 20 1 2 2.00 4 0 0 0 4 0 0 0 0 0
................................................................................................TGAAACCGTCCGAACCTGAGGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
.................................................................................................GAAACCGTGCAAAACTGAGGC................................................... 21 1 2 2.00 4 1 0 0 3 0 0 0 0 0
................................................................................................TGAAACCGTCCAACACTGACGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCATGACTGAGG.................................................... 21 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCATAGCTGGGG.................................................... 21 3 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCGAAACTGCGGC................................................... 22 2 2 2.00 4 0 4 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCGAAAACTGAGGC................................................... 22 1 2 2.00 4 4 0 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGCGAC................................................... 22 2 3 1.67 5 4 1 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCCAACCTGCGGC................................................... 22 3 2 1.50 3 0 3 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGCCA................................................. 24 0 2 1.50 3 1 0 2 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTGAGGTT.................................................. 23 2 2 1.50 3 1 1 0 1 0 0 0 0 0
................................................................................................TGAAACCGTCCAAAACTCAG..................................................... 20 1 2 1.50 3 1 2 0 0 0 0 0 0 0
................................................................................................TGAAACCGTCCAACACTGAGGCA.................................................. 23 2 2 1.50 3 0 2 1 0 0 0 0 0 0
................................................................................................TGAAACCGTCAAAAACAGAGGC................................................... 22 2 2 1.50 3 0 2 1 0 0 0 0 0 0
................................................................................................TGACACCGTCCATAACTGAGTC................................................... 22 3 2 1.50 3 0 2 1 0 0 0 0 0 0
................................................................................................TGAAAGCGTCCATAACTGGGGC................................................... 22 3 2 1.50 3 0 3 0 0 0 0 0 0 0
................................................................................................TGCAACCGTCCCAAACTGAGG.................................................... 21 2 2 1.50 3 0 2 0 0 1 0 0 0 0
................................................................................................TGAAACCGTCAAAAACTGAGGCT.................................................. 23 2 2 1.50 3 2 1 0 0 0 0 0 0 0

Anti-sense strand reads

CAGACAAGTAGGTTCTTATATAGTATAGGCATCACAACAGGTGTTATCTGGAATCAAAAGCTGCACAAAACCACACGACCCCTCAATATAAGGCTAACTTTGGCAGGTTTTGACTCCGGTTGACACTCCGCACTCGTTGATAGGTTTGTCGCTATGGTTGCTCGCGCAG

************************************.((((((((.....((((((((((.((((.((((((((......((((......)))).)))))))))))).)))))))))).....)))).))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total M026

head

 M043

female body

 M056

embryo

 V058

head

 V120

male body
................................................................................CCTCAATATAAGGCTATC....................................................................... 18 1 3 0.67 2 2 0 0 0 0
.......GTTGGTTCTTATATTGTATAGA............................................................................................................................................ 22 3 5 0.60 3 1 0 2 0 0
....................................AGAGCTGTTACCTGGAATC.................................................................................................................. 19 3 9 0.56 5 0 5 0 0 0
..............................................................................................................................TCCGAACTCGTTGTTAGTTTT...................... 21 3 11 0.18 2 2 0 0 0 0
.................................................................................................CTTTGGTAGGTTGTGAATC..................................................... 19 3 20 0.10 2 0 2 0 0 0
......................................................................................................................................CGGTGATAGGATTGTAGC................. 18 3 20 0.10 2 0 2 0 0 0
........TAGGTTCTTATATGGTATA.............................................................................................................................................. 19 1 20 0.05 1 0 0 0 0 1
.....................................................................................................................................TGGTTGATAGGTTTGACGGT................ 20 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droYak3 3L:22973830-22973998 - dya_1 confident GTCTG-TTCATCCAA-------GAATATATCATATC-CG-------TAG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-A-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCAACTATCCAAAC--------AG---------------------------------------------------CGATACCAACG-AGCGCGTC
droEre2 scaffold_4784:22180716-22180884 - der_4 confident AACTG-TTCATCTAA-------GAATGTACCATATC-CG-------TAG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAAC--------AG---------------------------------------------------CGATACCAACG-AGCGCGTC
droSec2 scaffold_11:2446933-2447101 - dse_9 confident ATCTG-TTCATCCAA-------GAATGCATTGTATC-CG-------TAG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAAA--------AG---------------------------------------------------AGATACCAACC-AGCGCGTC
droSim2 3l:22030937-22031105 - dsi-mir-957 Known_mirbase ATCTG-TTCATCCAA-------GAATGCATTGTATC-CG-------TAG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAAA--------AG---------------------------------------------------CGATACCAACC-AGCGCGTC
dm3 chr3L:22511259-22511426 - dme-mir-957 Known_mirbase AT-TG-TTCATCCAA-------GAATATATTATATC-CG-------TAG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGCGAGCATCTATCCAAAA--------AG---------------------------------------------------CGATACCAACG-AGCGCGTC
droEug1 scf7180000409801:98835-98998 - TT--G-TTCATCCAA-------GAATAC---------CCTGATGTGGAG------------TGTTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGAGAGCATCTGACCAA----------AG---------------------------------------------------CGGCACCGACG-AGCGCGTC
droBia1 scf7180000302377:741995-742161 + ATTTG-ATCATCCAC-------GAA-AT---------CCCAGCGTAGAA------------TGATGTCCACAATGAACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-G-AATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCGTGAGCATCTAACCAAAA--------TG---------------------------------------------------CGATACCAACG-AGCGCGTC
droTak1 scf7180000415491:455670-455836 - ATTCG-ATCATCCAC-------GAAAAT---------CCTAATGTAGCG------------TGTTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTAACCAAA---------GG---------------------------------------------------CGATACCAGCG-AACGCGTC
droEle1 scf7180000491199:234591-234756 + ATGTG-AACATCGAA-------GAACAT---------CTTTATATAGAG------------TGTTGCCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTAACAAA----------AG---------------------------------------------------CGATACTAACG-AGCGCGTT
droRho1 scf7180000779133:19437-19604 + ATCTG-ATCATCAAA-------GAAAAT---------CTTTAAATAGAG------------TGTTGCCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCCAACCAAAA--------AA---------------------------------------------------CGATACTAACG-AGCGCGTC
droFic1 scf7180000453830:518546-518712 + ATGCG-ACCAGCCTT-------A-AAAT---------GTCAAAGTAGAG------------TGTGGCCCGCAATGAACCTTAGTTTTAGACGTGTTTTGGTGTG-TG-GGGAGCG-A-TATTCCGATTGAAACCGTCCAAAACTGAGGCTAACTGT-GAGGCGTGAGCGTCTAACCAAAA-------CAG---------------------------------------------------CGATATTAACG-AGCGCGTC
droKik1 scf7180000302808:850754-850930 - GTCCG-AGTATCCAA-------ACAAAT---------CTCCATACAGAG------------TGATGTCCACAATGAACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCGTCTACCAAACCAAGTAAAAAG---------------------------------------------------CTATAACCACGCAGCGCGTT
droAna3 scaffold_13337:22247662-22247824 - dan_6 confident GTTTT-----GCCGA-------AAACATGTAAGATT-CG-------TAATATAGTAATATATACTGCCTACAATGGCCCTTAGTTTTCGACGTGTTTTGGTGTGCAG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTAAA-------------------------------------------------------------------------AATT-AGCGCGTT
droBip1 scf7180000396426:572707-572870 + ATC-A-ATCTTGTAA-------GAAT-----------CGTAATATAGAG------------TATTGCCCACAATGGTCCTTAGTTTTCGACGTGTTTTGGTGTGCAG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTAACCAACT--------TG---------------------------------------------------CGACAA-AATT-AACGCGTT
dp5 XR_group8:186414-186617 - dps-mir-957 Known_mirbase ATCCC-TGCAA--AA----GAAAAACAA--CCCACC-AG-------TAA-----------ATACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-GATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTAACCAAAA--------AAAAATATTAATAATAATAAGAAA----------------AAAGAAAGAACAACGA--ACAACGAAACGCGTT
droPer2 scaffold_80:80344-80569 + dpe_9 confident ATACCGATCC-CTGCAAAAGAAAAACAA---------CCCACC--AGAA----------TATACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-GATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTAACCAAAA--------AAAAATATTAATAATAATAAGAAAGAAACCAAAAAAAAAAAGAGAAAGAACAACGA--ACAACGAAACGCGTT
droWil2 scf2_1100000004511:7262456-7262608 + dwi_5 confident GTATGTGTTTTCTAC-------GCATAAATC-TCTCGCA-------TCA------------TA-TATCCGCAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTTAGGAAGTTTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGTTGTGATAGAAGCAACCATGAAAAC--------A------------------------------------------------------------------------
droVir3 scaffold_13049:17242419-17242536 + dvi-mir-957 Known_mirbase ----------------------------------------------------------------TGCCCACAATGGTTCTTAGTTTTAGACGTGTTTTGGTGTGCTT-G-AAGTT-T-TGTTCCGATTGAAACCGTCCAAAACTGAGGCCGATTGT-GAGGTAAAAGCGTCCAAA----T--------AC---------------------------------------------------TAAAACAAA-----------
droMoj3 scaffold_6680:22273689-22273793 + dmo_6 confident ----------------------------------------------------------------TGCCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTT-GGGAGTT-T-TGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GAGGCGAAAGCATCCA----------------------------------------------------------------------------------------
droGri2 scaffold_15110:14942016-14942124 - dgr_26 candidate-rescued ----------------------------------------------------------------TACCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTT-GGGAGTT-T-TGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GTGGTAAAAGCATCCAAATA------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
GTCTG-TTCATCCAA-------GAATATATCATATC-CG-------TAG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-A-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCAACTATCCAAAC--------AG---------------------------------------------------CGATACCAACG-AGCGCGTCSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................22249250.509850181795962993413337104619062040
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................21211481.5022963984310122522611833611340000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................2322394.0047884466323058217120000
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................202938.50187711845800124451600000
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................192593.0011861124900163700000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................232492.00984947220112110000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................232304.00608233220078260150000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................242268.0053650820062000000
...............................................................................................................................TGAAACCGTCCAAAACTG....................................................................................................................182192.003843831000000000
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................212137.0027418976105300000
...............................................................................................................................TGAAACCGTCCAAAACTGG...................................................................................................................19294.001881880000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................22268.5013757310175450000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................23267.001341200105800000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................22263.501271193003200000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................22263.0012645650155410000
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................20245.0090808001100000
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................20242.50851266001510000
...............................................................................................................................TGAAACCGTCCAAAACTGAC..................................................................................................................20225.5051500001000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................21222.0044400033700000
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................21218.0036920051910000
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................21218.00361300012200000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCT..............................................................................................................24214.0028250000300000
..............................................................................CTTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................23213.002642327710000
..................................................................................................................................AACCGTCCAAAACTGAGGC................................................................................................................19211.0022220000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTC..............................................................................................................2429.5019171001000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAA...............................................................................................................2328.0016140000200000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAT..............................................................................................................2426.001242001320000
...............................................................................................................................TGAAACCGTCCAAAACTGAA..................................................................................................................2025.5011110000000000
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................1925.501135000300000
................................................................................................................................GAAACCGTCCAAAACTGAGGCT...............................................................................................................2224.50981000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTTT.............................................................................................................2524.00850001200000
..............................................................................................................................TTGAAACCGTCCAAAACTGAGGC................................................................................................................2323.50760001000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAC..............................................................................................................2423.50760001000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTG..............................................................................................................2423.00650001000000
...............................................................................................................................TGAAACCGTCCAAAACTGATT.................................................................................................................2122.50500000500000
.................................................................................................................................AAACCGTCCAAAACTGAGGCT...............................................................................................................2122.50550000000000
...............................................................................................................................TGAAACCGTCCAAAACTGT...................................................................................................................1922.50550000000000
...............................................................................................................................TGAAACCGTCCAAAACTGC...................................................................................................................1922.50550000000000
................................................................................................................................GAAACCGTCCAAAACTGAGGCC...............................................................................................................2222.50550000000000
..............................................................................CTTAGTTTTCGACGTGTTTTGG.................................................................................................................................................................2222.50510000310000
................................................................................................................................GAAACCGTCCAAAACTGAG..................................................................................................................1922.50523000000000
..................................................................................................................................AACCGTCCAAAACTGAGG.................................................................................................................1822.50540001000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTA...............................................................................................................2322.00400001210000
...............................................................................................................................TGAAACCGTCCAAAACTGAT..................................................................................................................2022.00400001300000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCA..............................................................................................................2421.50310002000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................2321.50311000100000
droEre2
AACTG-TTCATCTAA-------GAATGTACCATATC-CG-------TAG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAAC--------AG---------------------------------------------------CGATACCAACG-AGCGCGTCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................22161985.006198521163416010973947494740
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................21159281.0059281229413544374009475150
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................2012015.0020151470188015815220
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................2311063.0010639211700757250
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................221651.0065160390135930
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................231408.00408460440342840
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................211282.0028215428041140
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................201255.002551610705820
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................211217.0021719012031830
..............................................................................CTTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................231195.0019513103131650
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................191140.00140608031230
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................231136.001364413081070
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................221115.00115602402830
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................21173.0073501003550
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................21158.005840604440
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................23155.005520506420
..............................................................................CTTAGTTTTCGACGTGTTTTGG.................................................................................................................................................................22146.0046501013270
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................19137.0037110202220
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................20130.0030110400150
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................24125.002510001230
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................22115.001520201100
................................................................................................................................GAAACCGTCCAAAACTGAG..................................................................................................................19114.00149010130
..................................................................................................................................AACCGTCCAAAACTGAGG.................................................................................................................18112.001210000110
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAT..............................................................................................................24111.00110030170
................................................................................................................................GAAACCGTCCAAAACTGAGGCA...............................................................................................................22110.00105000050
...............................................................................................................................TGAAACCGTCCAAAACTGAT..................................................................................................................2019.0091000080
..................................................................................................................................AACCGTCCAAAACTGAGGC................................................................................................................1918.0082000060
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAA...............................................................................................................2317.0070030040
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................2316.0060020040
................................................................................................................................GAAACCGTCCAAAACTGAGGCT...............................................................................................................2215.0054000010
...................................................................................................................................ACCGTCCAAAACTGAGGC................................................................................................................1815.0051000040
...............................................................................................................................TGAAACCGTCCAAAACTGATT.................................................................................................................2115.0050030020
..............................................................................CTTAGTTTTCGACGTGTTTTGGTA...............................................................................................................................................................2414.0040010030
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCT..............................................................................................................2414.0040000130
...............................................................................................................................TGAAACCGTCCAAAACTG....................................................................................................................1814.0041000030
..............................................................................CTTAGTTTTCGACGTGTTTTGGC................................................................................................................................................................2313.0030000030
...............................................................................................................................TGAAACCGTCCAAAACTGAGTA................................................................................................................2213.0030000030
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCA..............................................................................................................2413.0030000030
..............................................................................CTTAGTTTTCGACGTGTTTTG..................................................................................................................................................................2113.0031020000
...............................................................................TTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................2213.0030000030
...............................................................................................................................TGAAACCGTCCAAAACTGG...................................................................................................................1913.0030000030
...............................................................................................................................TGAAACCGTCCAAAACTGGC..................................................................................................................2042.2590000090
droSec2
ATCTG-TTCATCCAA-------GAATGCATTGTATC-CG-------TAG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAAA--------AG---------------------------------------------------AGATACCAACC-AGCGCGTCSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................21133768.0033768107433109429290
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................22128451.0028451752249679924404
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................2011556.00155610120121252
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................221388.003886222358
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................231355.0035525410289
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................231281.0028118230240
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................191160.00160620152
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................221105.00105116088
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................201103.00103685030
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................21187.008734080
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................21165.006555118
..............................................................................CTTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................23157.00571111827
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................24152.005254043
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................23144.004431139
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................21139.0039123024
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................21133.003316026
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................19128.002881019
..............................................................................CTTAGTTTTCGACGTGTTTTGG.................................................................................................................................................................22123.002316214
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................20118.001830015
...............................................................................................................................TGAAACCGTCCAAAACTG....................................................................................................................18115.001510014
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................23112.001200012
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................23110.00100109
................................................................................................................................GAAACCGTCCAAAACTGAG..................................................................................................................1917.0076001
................................................................................................................................GAAACCGTCCAAAACTGAGGCT...............................................................................................................2216.0064101
................................................................................................................................GAAACCGTCCAAAACTGAGGCA...............................................................................................................2215.0054001
...............................................................................TTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................2214.0040004
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCT..............................................................................................................2414.0040004
...............................................................................................................................TGAAACCGTCCAAAACTGAA..................................................................................................................2013.0030102
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAT..............................................................................................................2413.0030003
...............................................................................................................................TGAAACCGTCCAAAACTGAGCA................................................................................................................2212.0021001
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAA...............................................................................................................2312.0020200
..............................................................................................................................TTGAAACCGTCCAAAACTGAGGC................................................................................................................2312.0022000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................2212.0020002
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTTT.............................................................................................................2512.0020101
..............................................................................CTTAGTTTTCGACGTGTTTTG..................................................................................................................................................................2112.0021100
..................................................................................................................................AACCGTCCAAAACTGAGGC................................................................................................................1911.0011000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGGT...............................................................................................................2311.0010001
...................................................................................................................................ACCGTCCAAAACTGAGGC................................................................................................................1811.0011000
droSim2
ATCTG-TTCATCCAA-------GAATGCATTGTATC-CG-------TAG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTATCCAAAA--------AG---------------------------------------------------CGATACCAACC-AGCGCGTCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................221176950.00176950170635340020931697190712198110012001026
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................21130364.00303642864991210725573656834111900000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................23110399.00103991008426833120000010001000
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................1916248.00624853101351511577110000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................2016132.0061324485120162129145620120000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................2312383.00238317804471854300000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................2411433.001433136163810000000000000
...............................................................................................................................TGAAACCGTCCAAAACTG....................................................................................................................1811407.00140710513040232000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................231672.0067263220390000220103000
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................211495.0049547167100100000000000
...............................................................................................................................TGAAACCGTCCAAAACTGG...................................................................................................................192380.0076073521400000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................231268.0026825313110000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................221266.002662575220000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................221223.0022320311900000000000000
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................201159.001591484610000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................221113.001131082100000010100000
...............................................................................................................................TGAAACCGTCCAAAACTGAC..................................................................................................................20296.501931876000000000000000
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................20189.00896210250100000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................21166.0066591240000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................21160.0060582000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCT..............................................................................................................24159.0059572000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAA...............................................................................................................23159.0059572000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................21139.0039381000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAA..................................................................................................................20138.0038371000000000000000
..................................................................................................................................AACCGTCCAAAACTGAGGC................................................................................................................19137.0037360100000000000000
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................19126.0026211130000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAT..............................................................................................................24123.0023221000000000000000
................................................................................................................................GAAACCGTCCAAAACTGAG..................................................................................................................19123.0023800101400000000000
................................................................................................................................GAAACCGTCCAAAACTGA...................................................................................................................18120.0020800001200000000000
................................................................................................................................GAAACCGTCCAAAACTGAGGCC...............................................................................................................22115.0015400001100000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCA..............................................................................................................24114.0014300001100000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTC..............................................................................................................24113.0013120100000000000000
................................................................................................................................GAAACCGTCCAAAACTGAGGCT...............................................................................................................22112.0012120000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAC..............................................................................................................2419.00990000000000000000
..............................................................................................................................TTGAAACCGTCCAAAACTGAGGC................................................................................................................2319.00990000000000000000
...................................................................................................................................ACCGTCCAAAACTGAGGC................................................................................................................1819.00990000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGT...................................................................................................................1938.0024240000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTG..............................................................................................................2417.00770000000000000000
..................................................................................................................................AACCGTCCAAAACTGAGG.................................................................................................................1816.00660000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCC..............................................................................................................2416.00660000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAT..................................................................................................................2016.00660000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTA....................................................................................................................1826.0012111000000000000000
.................................................................................................................................AAACCGTCCAAAACTGAGGCT...............................................................................................................2115.00550000000000000000
..............................................................................CTTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................2314.00410000000000300000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................2314.00440000000000000000
..................................................................................................................................AACCGTCCAAAACTGAGGCT...............................................................................................................2013.00320000000100000000
................................................................................................................................GAAACCGTCCAAAACTGAGGCA...............................................................................................................2213.00310020000000000000
....................................................................................................................................CCGTCCAAAACTGAGGCT...............................................................................................................1813.00330000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAT...............................................................................................................2313.00330000000000000000
.................................................................................................................................AAACCGTCCAAAACTGAG..................................................................................................................1813.00320010000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTTT.............................................................................................................2513.00330000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGAG................................................................................................................2212.00220000000000000000
................................................................................................................................GAAACCGTCCAAAACTGAGGT................................................................................................................2112.00220000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGAA................................................................................................................2212.00220000000000000000
..............................................................................CTTAGTTTTCGACGTGTTT....................................................................................................................................................................1912.00220000000000000000
................................................................................................................................GAAACCGTCCAAAACTGAGGCTT..............................................................................................................2312.00220000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAAA.................................................................................................................2171.29990000000000000000
...................................................................................................................................ACCGTCCAAAACTGAGGCT...............................................................................................................1911.00110000000000000000
..............................................................................CTTAGTTTTCGACGTGTTTTGG.................................................................................................................................................................2211.00100010000000000000
dm3
AT-TG-TTCATCCAA-------GAATATATTATATC-CG-------TAG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGCGAGCATCTATCCAAAA--------AG---------------------------------------------------CGATACCAACG-AGCGCGTCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................211182213.001822130000573000020001033128300020035444241190413801291000000020010000001000001000000000000000000000945001000115160357644013400561157900120641144013294144714661891951343769286268824123806102500000000005000110000300001000000200024763186018039517352196582600552713283435386220140038240100000202000000000000000000273311411205014500430100097023859561351151954538638940000228430000020081000000100010000003015364133391364716002423158174421652121139271252336040003144131130201010108143841190155213331181113980132100
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................221129008.0012900800006410001050019050465000300222337602197179198016100100801910012040002500000000000000000001001148000000514222111232294341751573482274800102613255113512113221921147623160114206263110788120740795000000000016010000040110040000100000302072256501896144239919956423743918753531824681404005149104100020100100040003000000314145411343607103361041600181713009812404363840825213255235954900000023082100002002723131017011002002112824588327220790773492344105014812383966120383948110115105463014230050915558940338969587461120135220
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCATC.............................................................................................................25153707.005370700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599817709000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGATC..............................................................................................................24118047.00180470000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132374810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................20112436.00124360000210000001080042000000101532161511220000000000000000000003100000000000000000000009200000000020003744001215110000101000021015315611064142411023638821050000000000000000000000000000000000002373770156011641683226630933382000000392000100000000000000000000000000300000000000021000001322070014656904000000980000000000000000001000100010676540815103301501902300102100116158000021000000010010534398123373943103000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................2313204.00320400001000000000200500000000000000000000000000000000000000000000000000000000000010430000000001601301800018310010002001012611518018441039543390000000000000000100000000000000000001241390126111109629928411867000002650000000000000000000000000000001100000010000713900000553200031310900000280000000000000000000000000000189217170197004119000000880415900000000000000004188143873002000
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................2111940.00194000000000000000000000000000020144441100000000000000000000000000000000000000000000000000000000000000000009000000000000035177030057562263379304300000000000000000000000000000000000013114408602935414809812579000002290000000000000000000000000000010000010010000000000002000013000000050000000000000000000000000000357801220000005013000000000000000011000100000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................2311772.001772000010000000003001000000000000000000000000000000000000000000000000000000000000002000000000010070500004800000000000001495030151170181242800000000000000000000000000000000000065750370046390771580104100000152000000000000000000000000000000020100000000095000008530001113503000001600000000100000000000000000008169789601119030100470202900000000000000001326252545001000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................2211754.00175400002000000000100000000000000000000000000010000000000000000000000000000000000000000000000000002110000100000000000000014190200251986214081900000000000000000000000000000000000017290110120450260350491300000830000000000000000000000000000000000000000000282860010024400007470300001260000000000000000000000000000948610713300320100001408120000000000000000319832924001000
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................2011545.00154500000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000600000010000005475903204828772375463400000000000000000000000000000000000012216008301676726111280194900000137000000000000000000000000000000010000000000020000000300001300000001000000000000000000000000000061510900200100003023000000000000000012110000000000
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................1911242.001242000000000000000001000000000051162201000000000000000000000041000000000000000000000000000000000000400000050000000000000015204032306115180000000000000000000000000000000000003254091011261166481401200000290000000000000000000000000000000010000000000100000022200001830300000400000000000000000000000000006141811340011020000100330000000000000000336540010000000
..............................................................................CTTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................2311161.0011610000000000000001200000000001000000000000010000000000000000000000000000000000000000000000012100400000090000000000000107020408020010000000000000000000000000000000000001719014431123609152218000002000000000000000000000000000000021100001000000002000100001010020000111000000000000000000000000020076896293033211100010012014330000021440000100134081341069203000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................221934.009340000100000000011000000000100000000000000000000000000000000000000000000000000000020000000000300102000017000000000000011350905614052123000000000000000000000000000000000000191701900181312301602520000031000000000000000000000000000010030110000000058110000001910009350700000110000000010000000000000000000434145540213304000014015200000000100010100720260913003000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAT...............................................................................................................231692.006920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000100000000000000000000000000000000000001100000200020200000010000000000000000000000000000000000000000000513164000000000000000000000000000000000000000000000000000100000000000000000000000000000000200000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................211500.00500000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001010206011120000000000000000000000000000000000001360200410100010000001200000000000000000000000000000000000000000000000000021000324030000010000000000000000000000000000745236107005700000016099000000000000000056341011000000
................................................................................................................................GAAACCGTCCAAAACTGAGGCATC.............................................................................................................241456.004560000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337119000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................211422.0042200004100000000000000000000000000000000000000000000000000000000000000000000000000200000000004000010000000000000000000810401317021200000000000000000000000000000000000008806004717060800000014000000000000000000000000000000000000000000012000001100000319040000030000000000000000000000000000222836170021020000100690000000000000000011940111000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................211283.0028300001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000430202010202600000000000000000000000000000000000091507004201010000000012000000000000000000000000000000000000000000000000000100002200000001000000000000000000000000000028243043004202000021068000000000000000012810120100000
................................................................................................................................GAAACCGTCCAAAACTGAG..................................................................................................................191226.002260000000000000000000000000000001060000000000000000000000000000000000000000000000001000000000000000000001000000000000007404172503266000000000000000000000000000000000000122706007701201604620000021000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000300000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAT..............................................................................................................241206.0020600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000100000000004100000000000000000000000000000000000057030021050505000000900000000000000000000000000000000000000000008539000000200003000000000000000000000000000000000000072520000000000100000000000000000000900000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................231202.0020200000000000000300000000000000000000000000010000000000000102000000000000000000000100000000000004020000110000000000000043010208130320000000000000000000000000000000000002707005405010420000012000000000000000000000000000000110000210000001000101500003000000003000000001000000000000000000011208700310000006052000000000000000001400201001000
..............................................................................CTTAGTTTTCGACGTGTTTTGG.................................................................................................................................................................221169.001690000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000002000000000000000030000000000100000000000000000000000000000000000002101100120236016000002000000000000000000000000000000010000002000000000000000000300000000000000000000000000000000000013781100310000001010000000010000000056141001000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................241166.001660000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000070000000000000030010003140000000000000000000000000000000000000007102005503050400000060000000000000000000000000000000001000010000000000004000001000000000000000000000000000000000000012541300000000000013000000000000000025100010000000
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................191123.001230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000021000103000000000000000000000000000000000000000006501005708021600000020000000000000000000000000000000000000000000000000001000001010000010000000000000000000000000000125141500100000000000000000000000000002100000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................221118.0011800000000000000000000000000000000000000000000000000000000000000000000000000000000400000000007000000000200000000000000140301410010110000000000000000000000000000000000001102001101080710000070000000000000000000000000000000000000000000000000022000014010000040000000000000000000000000000712710000000000300300000000000000000200000000000
...............................................................................................................................TGAAACCGTCCAAAACTG....................................................................................................................181111.001110000000000000000000000000000233200000000000000000000000010000000000000000000000000000000000000001000000000000000000030010001039210000000000000000000000000000000000000703001233260140000010000000000000000000000000000000000000000000100000012000000000000000000000000000000000000000000695150000020000200000000000000000000300000000000
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................20194.009400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000230202181000000000000000000000000000000000000000029040016030401000000010000000000000000000000000000000010000000000000000000200000000000001000000000000000000000000000045620010000000100000000000000000000300000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................23182.008200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000200000000001000000000000000000000000000000000000032010031020003000000600000000000000000000000000000000000000000001000000030000020000000000000000000000000000000000009101500000000005001000000000000000021410101000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGATT..............................................................................................................24178.007800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTC..............................................................................................................24168.006800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................AAACCGTCCAAAACTGAGGCATC.............................................................................................................23261.0012200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................GAAACCGTCCAAAACTGAGGCA...............................................................................................................22152.0052000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000004100000003000000000000000000000000000000000000000350300530204090000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAT..................................................................................................................20149.00490000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010010264000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000051130000000000000000000000000000000400000000000
................................................................................................................................GAAACCGTCCAAAACTGAGGATC..............................................................................................................23248.009600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAA...............................................................................................................23145.00450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000200000000000000000000000000000000000000000001400000101010300000050000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000235100000000000002000000000000000001100000000000
...............................................................................................................................TGAAACCGTCCAAAACTGATT.................................................................................................................21143.00430000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100011020000000000000000000000000000000000002101000000000000000000000000000000000000000000000000000000000000000000000100014000000000000000000000000000000000000106090001000000100000000000000000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCTC.............................................................................................................25141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................23133.0033000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000100100320202031000000000000000000000000000000000000000000000000001000000100001100000000000000000000000000000000000010220000000000000100000000000000000500000000000
droEug1
TT--G-TTCATCCAA-------GAATAC---------CCTGATGTGGAG------------TGTTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGAGAGCATCTGACCAA----------AG---------------------------------------------------CGGCACCGACG-AGCGCGTCSizeHit CountTotal NormTotal
No Reads
droBia1
ATTTG-ATCATCCAC-------GAA-AT---------CCCAGCGTAGAA------------TGATGTCCACAATGAACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-G-AATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCGTGAGCATCTAACCAAAA--------TG---------------------------------------------------CGATACCAACG-AGCGCGTCSizeHit CountTotal NormTotal
No Reads
droTak1
ATTCG-ATCATCCAC-------GAAAAT---------CCTAATGTAGCG------------TGTTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTAACCAAA---------GG---------------------------------------------------CGATACCAGCG-AACGCGTCSizeHit CountTotal NormTotal
No Reads
droEle1
ATGTG-AACATCGAA-------GAACAT---------CTTTATATAGAG------------TGTTGCCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTAACAAA----------AG---------------------------------------------------CGATACTAACG-AGCGCGTTSizeHit CountTotal NormTotal
No Reads
droRho1
ATCTG-ATCATCAAA-------GAAAAT---------CTTTAAATAGAG------------TGTTGCCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCCAACCAAAA--------AA---------------------------------------------------CGATACTAACG-AGCGCGTCSizeHit CountTotal NormTotal
No Reads
droFic1
ATGCG-ACCAGCCTT-------A-AAAT---------GTCAAAGTAGAG------------TGTGGCCCGCAATGAACCTTAGTTTTAGACGTGTTTTGGTGTG-TG-GGGAGCG-A-TATTCCGATTGAAACCGTCCAAAACTGAGGCTAACTGT-GAGGCGTGAGCGTCTAACCAAAA-------CAG---------------------------------------------------CGATATTAACG-AGCGCGTCSizeHit CountTotal NormTotal
No Reads
droKik1
GTCCG-AGTATCCAA-------ACAAAT---------CTCCATACAGAG------------TGATGTCCACAATGAACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCGTCTACCAAACCAAGTAAAAAG---------------------------------------------------CTATAACCACGCAGCGCGTTSizeHit CountTotal NormTotal
No Reads
droAna3
GTTTT-----GCCGA-------AAACATGTAAGATT-CG-------TAATATAGTAATATATACTGCCTACAATGGCCCTTAGTTTTCGACGTGTTTTGGTGTGCAG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTAAA-------------------------------------------------------------------------AATT-AGCGCGTTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................21135131.00351311576263335855285324551
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................22129697.00296971230960816643190518878
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................2011437.00143713940441207646
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................221634.006346313915570
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................231483.004836657214724187
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................231374.003745511011136161
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................211297.002970001631250
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................221228.002289516933111
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................211226.00226110931184
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................191168.001681100492106
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................201158.00158118005332
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................211132.00132930014322
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................241107.0010721020579
..............................................................................CTTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................23192.00921206578
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................21191.009101028656
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................23135.00351005128
...............................................................................................................................TGAAACCGTCCAAAACTGAT..................................................................................................................20124.00240000222
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................22115.0015400128
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................23115.0015020526
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................20114.0014810302
................................................................................................................................GAAACCGTCCAAAACTGAG..................................................................................................................19113.0013900004
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................19111.0011400106
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAT..............................................................................................................2419.009210321
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAA...............................................................................................................2318.008110015
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTTT.............................................................................................................2517.007000214
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................2317.007000304
...............................................................................................................................TGAAACCGTCCAAAACTG....................................................................................................................1816.006010500
................................................................................................................................GAAACCGTCCAAAACTGAGGCA...............................................................................................................2215.005500000
..............................................................................CTTAGTTTTCGACGTGTTTTGG.................................................................................................................................................................2215.005100022
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCATT.............................................................................................................2514.004000103
..................................................................................................................................AACCGTCCAAAACTGAGGC................................................................................................................1913.003300000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCT..............................................................................................................2413.003000003
...............................................................................................................................TGAAACCGTCCAAAACTGAGAA................................................................................................................2213.003000003
................................................................................................................................GAAACCGTCCAAAACTGAGGCT...............................................................................................................2213.003300000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTG..............................................................................................................2413.003000300
...............................................................................................................................TGAAACCGTCCAAAACTGAC..................................................................................................................2013.003100200
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTA...............................................................................................................2313.003101001
...............................................................................................................................TGAAACCGTCCAAAACTGAGAT................................................................................................................2213.003000021
..............................................................................................................................TTGAAACCGTCCAAAACTGAGG.................................................................................................................2213.003300000
...............................................................................................................................TGAAACCGTCCAAAACTGGC..................................................................................................................2013.003000003
..............................................................................................................................TTGAAACCGTCCAAAACTGAGGC................................................................................................................2313.003300000
.....................................................................................................................................................CAACTGT-GAGGCGTGAGCATCTA........................................................................................2312.002000002
droBip1
ATC-A-ATCTTGTAA-------GAAT-----------CGTAATATAGAG------------TATTGCCCACAATGGTCCTTAGTTTTCGACGTGTTTTGGTGTGCAG-GGGAGTT-C-TATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTAACCAACT--------TG---------------------------------------------------CGACAA-AATT-AACGCGTTSizeHit CountTotal NormTotal
No Reads
dp5
ATCCC-TGCAA--AA----GAAAAACAA--CCCACC-AG-------TAA-----------ATACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-GATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTAACCAAAA--------AAAAATATTAATAATAATAAGAAA----------------AAAGAAAGAACAACGA--ACAACGAAACGCGTTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................22135574.0035574175354034519166967655883187433484
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................21132520.0032520296290311717911727712683613386
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................2011718.00171836351510048874007
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................201534.0053404861320131100
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................231482.004821010713000557002
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................231428.0042821260151312375011
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................211392.00392228626001112127
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................231252.0025211951950291002
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................221235.0023512921410517202
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................221129.001290251690312001
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................191119.001194530350251001
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................241111.001119330430241100
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................21194.0094001760143000
................................................................................................................................GAAACCGTCCAAAACTGAG..................................................................................................................19158.005805800000000
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................20145.0045019014060006
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................19136.003602802050001
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................21135.003506022070000
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................21130.003001021071000
..............................................................................CTTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................23126.002601256101001
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCT..............................................................................................................24123.00230709070000
...............................................................................................................................TGAAACCGTCCAAAACTGAC..................................................................................................................20119.001900019000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAT..............................................................................................................24114.001401103000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................23112.00120206040000
................................................................................................................................GAAACCGTCCAAAACTGAGGCT...............................................................................................................22111.001101001000000
................................................................................................................................GAAACCGTCCAAAACTGAGGCA...............................................................................................................22111.001101100000000
................................................................................................................................GAAACCGTCCAAAACTGAGGCC...............................................................................................................2217.0070105010000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................2217.0070303010000
...............................................................................................................................TGAAACCGTCCAAAACTGG...................................................................................................................1916.0061005000000
..............................................................................................................................TTGAAACCGTCCAAAACTGAGG.................................................................................................................2216.0060600000000
..................................................................................................................................AACCGTCCAAAACTGAGG.................................................................................................................1816.0060501000000
...............................................................................................................................TGAAACCGTCCAAAACTG....................................................................................................................1815.0050101020001
................................................................................................................................GAAACCGTCCAAAACTGAGGCTT..............................................................................................................2315.0050400010000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAA...............................................................................................................2314.0040101020000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCC..............................................................................................................2414.0040003010000
..............................................................................CTTAGTTTTCGACGTGTTTTGGC................................................................................................................................................................2313.0030003000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................2313.0030101010000
...................................................................................................................................ACCGTCCAAAACTGAGGC................................................................................................................1813.0030201000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTTT.............................................................................................................2513.0030102000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCA..............................................................................................................2413.0030300000000
..............................................................................CTTAGTTTTCGACGTGTTTTGG.................................................................................................................................................................2213.0030002010000
..................................................................................................................................AACCGTCCAAAACTGAGGC................................................................................................................1913.0030003000000
................................................................................................................................GAAACCGTCCAAAACTGA...................................................................................................................1813.0030300000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAC..............................................................................................................2413.0030201000000
.................................................................................................................................AAACCGTCCAAAACTGAG..................................................................................................................1813.0030300000000
...............................................................................................................................TGAAACCGTCCAAAACTGT...................................................................................................................1912.0020002000000
..............................................................................CTTAGTTTTCGACGTGTTTTGGTT...............................................................................................................................................................2412.0020000110000
..............................................................................CTTAGTTTTCGACGTGTTTTGGTGT..............................................................................................................................................................2512.0020000020000
droPer2
ATACCGATCC-CTGCAAAAGAAAAACAA---------CCCACC--AGAA----------TATACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTG-GGGAGTT-GATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTAACCAAAA--------AAAAATATTAATAATAATAAGAAAGAAACCAAAAAAAAAAAGAGAAAGAACAACGA--ACAACGAAACGCGTTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................22121405.0021405819450476611104083070
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................21119541.00195412966512587390083954
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................2011009.0010091441309514140
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................231398.00398013013622326
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................231261.00261101005715133
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................221161.00161130389227
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................231101.00101740264618
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................22186.0086130353512
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................19168.0068144011381
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................21167.006744001094
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................20161.006104201063
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................24156.005621020267
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................21140.004011010244
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................21135.00350008216
..............................................................................CTTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................23126.00260109610
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................21123.00230107123
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCT..............................................................................................................24116.00160104101
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................20112.0012020370
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCA..............................................................................................................2418.008000170
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................1918.008040130
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................2316.006000060
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................2216.006220110
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................2316.006000420
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTG..............................................................................................................2415.005000140
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTTT.............................................................................................................2514.004000040
...............................................................................................................................TGAAACCGTCCAAAACTG....................................................................................................................1814.004000040
...............................................................................................................................TGAAACCGTCCAAAACTGACC.................................................................................................................2114.004000040
................................................................................................................................GAAACCGTCCAAAACTGAGGCA...............................................................................................................2213.003020010
.................................................................................................................................AAACCGTCCAAAACTGAG..................................................................................................................1813.003030000
droWil2
GTATGTGTTTTCTAC-------GCATAAATC-TCTCGCA-------TCA------------TA-TATCCGCAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTTAGGAAGTTTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGTTGTGATAGAAGCAACCATGAAAAC--------A------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................221236519.00236519209115955125585624338
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................21154238.005423823886956165612127619
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................2318157.008157796130121153
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................2313320.003320325773350
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................2012989.002989229664723554
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................1912269.002269219591163
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................241961.0096194333111
...............................................................................................................................TGAAACCGTCCAAAACTG....................................................................................................................181828.008288280000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................231563.0056333925141184
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................211552.00552452711127
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................221467.00467107671346
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCT..............................................................................................................241337.003373312103
...............................................................................................................................TGAAACCGTCCAAAACTGG...................................................................................................................191275.002752740001
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................221270.0027018538371
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................221233.002332270006
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................231176.0017615130022
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................201149.001491414004
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................201141.0014132693037
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................211110.001102500085
..............................................................................CTTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................23171.00715011055
...............................................................................................................................TGAAACCGTCCAAAACTGAC..................................................................................................................20164.0064640000
..................................................................................................................................AACCGTCCAAAACTGAGGC................................................................................................................19148.0048442002
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................21146.00462301022
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................21145.00451801026
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................19143.00432400019
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCC..............................................................................................................24135.0035350000
..............................................................................................................................TTGAAACCGTCCAAAACTGAGGC................................................................................................................23123.0023203000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAA...............................................................................................................23117.0017140003
................................................................................................................................GAAACCGTCCAAAACTGAGGCT...............................................................................................................22117.0017134000
...............................................................................................................................TGAAACCGTCCAAAACTA....................................................................................................................18114.0014140000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCG..............................................................................................................24113.0013130000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTTT.............................................................................................................25113.0013110002
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTG..............................................................................................................24112.0012120000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTC..............................................................................................................24112.0012111000
................................................................................................................................GAAACCGTCCAAAACTGAG..................................................................................................................19112.001266000
................................................................................................................................GAAACCGTCCAAAACTGAGGCC...............................................................................................................22110.0010100000
...............................................................................................................................TGAAACCGTCCAAAACTGAA..................................................................................................................2019.00950004
................................................................................................................................GAAACCGTCCAAAACTGAGGCA...............................................................................................................2218.00825001
...............................................................................................................................TGAAACCGTCCAAAACTGT...................................................................................................................1918.00880000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAT..............................................................................................................2418.00830005
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCA..............................................................................................................2417.00731102
...................................................................................................................................ACCGTCCAAAACTGAGGC................................................................................................................1817.00770000
...............................................................................................................................TGAAACCGTCCAAAACTGGC..................................................................................................................2016.00600006
...............................................................................................................................TGAAACCGTCCAAAACTGC...................................................................................................................1915.00540001
...............................................................................................................................TGAAACCGTCCAAAACTGAGTT................................................................................................................2215.00530002
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................2314.00421001
...............................................................................................................................TGAAACCGTCCAAAACTGAGAA................................................................................................................2214.00410003
..............................................................................................................................TTGAAACCGTCCAAAACTGAGG.................................................................................................................2214.00431000
...............................................................................TTAGTTTTCGACGTGTTTTGGT................................................................................................................................................................2214.00400004
...............................................................................................................................TGAAACCGTCCAAAACTGAT..................................................................................................................2013.00300102
.................................................................................................................................AAACCGTCCAAAACTGAG..................................................................................................................1813.00321000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAT...............................................................................................................2313.00300003
..............................................TCA------------TA-TATCCGCAATGGAC.......................................................................................................................................................................................1913.00330000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAC..............................................................................................................2412.00220000
.................................................................................................................................AAACCGTCCAAAACTGAGGCT...............................................................................................................2112.00220000
......................................A-------TCA------------TA-TATCCGCAATGGAC.......................................................................................................................................................................................2012.00220000
..................................................................................................................................AACCGTCCAAAACTGAGGCC...............................................................................................................2012.00220000
...............................................................................................................................TGAAACCGTCCAAAACTGAAT.................................................................................................................2112.00200002
...............................................................................................................................TGAAACCGTCCAAAACTGAAA.................................................................................................................2112.00220000
droVir3
----------------------------------------------------------------TGCCCACAATGGTTCTTAGTTTTAGACGTGTTTTGGTGTGCTT-G-AAGTT-T-TGTTCCGATTGAAACCGTCCAAAACTGAGGCCGATTGT-GAGGTAAAAGCGTCCAAA----T--------AC---------------------------------------------------TAAAACAAA-----------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................221126083.0012608329943131488994538725474143122560333515024971133638137411885621314591780271391441570625435522725015183883291275151018294252566610276322877318789544595407221014281429745191957987580118043591951353471734193141585266
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................21163068.00630687996421180116214929209111801540941553087623711894324601999510102516427728041428326328291641634814311717915462101255096170221245381328736817580297637523543549412981528796310566112131822128247542885748
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................2013728.003728981087192214413060225211268497913065015410327147241142044025109102810000000000000000051165215700567755424441479325126264764
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................2313133.0031332211526357151708000006436223832190466458816911132010313410000000000000000022208315014302322937273510113515427286182
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................2312922.002922126425116230030227198240184422260536193252395501012616333152224100000000000000000001956013109792445546328161051393112103175255
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................1911794.00179412113801302010000000874479025131101001002000000000000000000000011009450004531123116102262152
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................2211671.001671103698261360120114312971381076272624312422012011559280010000000100000002003560523511623921026456130239142366
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAA..............................................................................................................2411619.001619005000400000552010000013321930230000280534229332500000000000000000002010010129999336121053052576777118166
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................221931.009312356500005001246242220441211200001030113000000000000000000400435001717015210010041225349104140
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................231819.00819962967544201100006611423431230421120100002000000000000000000200750125618605536545621236168
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................241631.006313325440000001000032223104701011000000000020001010000000000001201910105635433536122948163187
...............................................................................................................................TGAAACCGTCCAAAACTG....................................................................................................................181395.0039529257200020000000200000000100100000000000100000000000000000030000000023242116109621210
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................211304.00304269680000000000001001000200000000000010110000000000000000000006300002420252115123151238
...............................................................................................................................TGAAACCGTCCAAAACTGG...................................................................................................................191284.002842326001000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................201214.0021401214410020000101200000000001000000003000000000000000000000000041000102463014042213
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAA...............................................................................................................231201.002011610000000000000001101000010000000112210000000000000000000002100032182120602332282924
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................211187.00187221300000000001111010021200110000000101100000000000000000010018400018151610001051092127
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCT..............................................................................................................241112.0011211170000100000000110000000000000120000000000000000000000000100200002685515251612071
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................231110.00110116300000000000131021103300101000010001000000000000000000000001000020000106410011
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTA..............................................................................................................241108.00108001000200000000000110030111300001015131000000000000000000000000025529023100213146
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................22193.0093125720000000000010011000001000000000000010000000000000000000101100001001000002163
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTA...............................................................................................................23174.007400003000000000000000000138310000020304331000000000000000000000000110369033210010
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAT..............................................................................................................24173.0073200010200000013010040520102000001001200000000000000000000000100006411001100111252
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTAA..............................................................................................................24160.00600010000000000000000000023011000010330220000000000000000000000004221670101070244
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAC..............................................................................................................24160.006010000000000000000000000000000000000000100000000000000000000000000341322000194938
...............................................................................................................................TGAAACCGTCCAAAACTGAC..................................................................................................................20157.005715200000000000000000000000000000000000000000000000000000000003000000100000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................21148.004816011000000001020000101000100000000000000000000000000000000026200030200000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................21147.0047212100010000010010020000000000001000010100000000000000000000011000013204001010001
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................20145.004512150000000000010121001100000010000000000000000000000000000002000000100010330000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCA..............................................................................................................24134.00340110000000001040100000001022000100020120000000000000000000001000000221300310011
...............................................................................................................................TGAAACCGTCCAAAAC......................................................................................................................16132.003200000000000000000000000000000000000000000000000000011000030000000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCC..............................................................................................................24130.003013100100000000000000000000000000200000000000000000000000000000000000033100600000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTTT.............................................................................................................25122.00222400000000000000001100000000000000000000000000000000000000001000000202503100000
................................................................................................................................GAAACCGTCCAAAACTGAGGCT...............................................................................................................22122.002231130000000000000000000001000000000000000000000000000000000001000000200000010000
..............................................................................CTTAGTTTTAGACGTGTTTTGG.................................................................................................................................................................22122.00220010100000000000010000140020000000000000000000000000000000016400100000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAA..................................................................................................................20121.002111300000000000000001000000000000000000000000000000000000000000000001100010201000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAAT.............................................................................................................25119.00190000000000000000000000000000000000100000000000000000000000000000031300000012143
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAAA..............................................................................................................24218.00360000000000000010000000021010000000111010000000000000000000000000063700000031025
................................................................................................................................GAAACCGTCCAAAACTGAG..................................................................................................................19117.001701160000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................19116.00160290000000000100000000000000000000000000000000000000000000001000000000010011000
..............................................................................CTTAGTTTTAGACGTGTTTTGGT................................................................................................................................................................23116.00160022000000000000001000000101000000100000000000000000000000012500000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................23115.00150000001000000000000000110100000000110130000000000000000000000000100012001000000
...............................................................................................................................TGAAACCGTCCAAAACTGT...................................................................................................................19115.001511200000000000000000000000000000000000000000000000000000000002000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTC..............................................................................................................24114.00144210000000000000001000001100000000000000000000000000000000000000010000100020000
..................................................................................................................................AACCGTCCAAAACTGAGGC................................................................................................................19113.00131611000000000000010001000000000000000000000000000000000000001000100000000000000
..............................................................................CTTAGTTTTAGACGTGTTTTGGTC...............................................................................................................................................................24110.00100000012000000000000000000000100010000010000000000000000000000000200000001100000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTTA..............................................................................................................24110.00100000000000200000000000000000000000010000000000000000000000000000001021000300000
...............................................................................................................................TGAAACCGTCCAAAACTGAGTT................................................................................................................2219.0090000001000000000000001000010000000000000000000000000000000000000000204000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAAG.............................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000201000002012
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAAC.............................................................................................................2518.0080000000000000000000000000000000000010000000000000000000000000000001200003000001
...............................................................................................................................TGAAACCGTCCAAAACTGC...................................................................................................................1918.0080800000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TTGAAACCGTCCAAAACTGAGGC................................................................................................................2318.0081200000000000010000000000010000000000000000000000000000001000000000000200000000
.....................................................................................................GTGCTT-G-AAGTT-T-TGTTCCGAT......................................................................................................................................2217.0070000000000001010000000000011000000100100000000000000000000000100000000000000000
................................................................................................................................GAAACCGTCCAAAACTGAGGT................................................................................................................2117.0070010000000000000000000000000000000000000000000000000000000000000000041000100000
................................................................................................................................GAAACCGTCCAAAACTGAGGCA...............................................................................................................2216.0060110000000000000000000000000000000000000000000000000000000000000000100100000101
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAT...............................................................................................................2316.0060100000000000000000000000000000000000000000000000000000000000000001300000010000
...............................................................................................................................TGAAACCGTCCAAAACTGAAA.................................................................................................................2125.50112000000000000000000000001100000000000000000000000000000000001000000000100400100
...............................................................................................................................TGAAACCGTCCAAAACTGACC.................................................................................................................2115.0051000000000000000000000000000000000000000000000000000000000003000000100000000000
..............................................................................CTTAGTTTTAGACGTGTTTTGGTGT..............................................................................................................................................................2515.0050000100000010000000000000000000000010000000000000000000000000000000100000000001
................................................................................................................................GAAACCGTCCAAAACTGAGGCC...............................................................................................................2215.0050300000000000000000000000000000000000000000000000000000000000000000000000200000
..................................................................................................................................AACCGTCCAAAACTGAGG.................................................................................................................1815.0050210000000000000000000000000000000000000000000000000000000000001000000000010000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTCC.............................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000030001010000
...............................................................................................................................TGAAACCGTCCAAAACTGAGAA................................................................................................................2215.0050000000000000001000000000000000000000000000000000000000000000000000000000000013
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCG..............................................................................................................2415.0051100000000000000000000000000000000000000000000000000000000000000000010000100001
.................................................................................................................................AAACCGTCCAAAACTGAG..................................................................................................................1814.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TGAAACCGTCCAAAACTGAGCT................................................................................................................2214.0040000000000000000000001000000000000000000000000000000000000003000000000000000000
..............................................................................CTTAGTTTTAGACGTGTTTTG..................................................................................................................................................................2114.0040010000000000000000000000000000000000010000000000000000000002000000000000000000
droMoj3
----------------------------------------------------------------TGCCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTT-GGGAGTT-T-TGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GAGGCGAAAGCATCCA----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................22118576.0018576172525464196604682057
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................21115976.00159761865237918015202283
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................201760.0076013101553511122
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................231487.004871000110231343
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................231296.0029652081144019
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................221259.0025914057165023
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................201135.00135121021002
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................211129.00129116021001
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTT..............................................................................................................241122.001221103069012
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................19199.009980305605
...............................................................................................................................TGAAACCGTCCAAAACTGAGGA................................................................................................................22183.008370214915
...............................................................................................................................TGAAACCGTCCAAAACTGAGGTT...............................................................................................................23137.00371072801
...............................................................................................................................TGAAACCGTCCAAAACTGAGT.................................................................................................................21127.00270071901
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCC...............................................................................................................23127.00272081322
...............................................................................................................................TGAAACCGTCCAAAACTGAGA.................................................................................................................21126.00264061402
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCG...............................................................................................................23122.00221051501
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................21121.00210031701
..............................................................................CTTAGTTTTAGACGTGTTTTGGT................................................................................................................................................................23116.0016104407
..............................................................................CTTAGTTTTAGACGTGTTTTGG.................................................................................................................................................................22112.0012301503
.................................................................................................................................AAACCGTCCAAAACTGAGGC................................................................................................................20112.0012702210
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCAT..............................................................................................................24111.0011101702
................................................................................................................................GAAACCGTCCAAAACTGAGGCT...............................................................................................................22110.0010700210
.................................................................................................................................AAACCGTCCAAAACTGAGG.................................................................................................................1919.009502200
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCTTT.............................................................................................................2519.009102402
................................................................................................................................GAAACCGTCCAAAACTGAG..................................................................................................................1918.008800000
...............................................................................................................................TGAAACCGTCCAAAACTGAGGG................................................................................................................2217.007301300
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCT..............................................................................................................2417.007003400
..............................................................................................................................TTGAAACCGTCCAAAACTGAGG.................................................................................................................2214.004301000
..................................................................................................................................AACCGTCCAAAACTGAGG.................................................................................................................1814.004200200
................................................................................................................................GAAACCGTCCAAAACTGAGGT................................................................................................................2114.004400000
...............................................................................................................................TGAAACCGTCCAAAACTGT...................................................................................................................1914.004002200
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCCA..............................................................................................................2413.003000300
..................................................................................................................................AACCGTCCAAAACTGAGGC................................................................................................................1913.003100020
...............................................................................................................................TGAAACCGTCCAAAACTGAGGAA...............................................................................................................2312.002000200
droGri2
----------------------------------------------------------------TACCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTT-GGGAGTT-T-TGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GTGGTAAAAGCATCCAAATA------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...............................................................................................................................TGAAACCGTCCAAAACTGAGGC................................................................................................................221506.00506281225
...............................................................................................................................TGAAACCGTCCAAAACTGAGG.................................................................................................................211261.00261135126
................................................................................................................................GAAACCGTCCAAAACTGAGGC................................................................................................................21128.0028280
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCT...............................................................................................................23113.001394
................................................................................................................................GAAACCGTCCAAAACTGAGG.................................................................................................................20110.0010100
...............................................................................................................................TGAAACCGTCCAAAACTGAG..................................................................................................................2018.00871
...............................................................................................................................TGAAACCGTCCAAAACTGAGGT................................................................................................................2214.00431
...............................................................................................................................TGAAACCGTCCAAAACTGAGGCA...............................................................................................................2312.00220
................................................................................................................................GAAACCGTCCAAAACTGAGGCA...............................................................................................................2211.00110
...............................................................................................................................TGAAACCGTCCAAAACTGA...................................................................................................................1911.00110
..............................................................................................................................TTGAAACCGTCCAAAACTGAGGC................................................................................................................2311.00110
...............................................................................TTAGTTTTAGACGTGTTTTGGT................................................................................................................................................................2211.00110
...............................................................................................................................TGAAACCGTCCAAAACTGAGGATG..............................................................................................................2411.00110
...............................................................................................................................TGAAACCGTCCAAAACTGAGC.................................................................................................................2111.00101

Generated: 10/20/2015 at 07:42 PM