ID:

dya-mir-5

 Coordinate:

2R:13624062-13624125 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.7 -23.5 -23.4

Flybase annnotation

utr3 [utr3_minus_3616]; pre_miRNA [Dyak\mir-5-RM]; miRNA [Dyak\miR-5-RA]

No Repeatable elements found

Sense Strand Reads

CGGGTCAAGAAATCGAGTTAAGTGTTCCCCCAATTTAACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTATTCCCTAACATATCACAGTGATTTTCCTTTATAACGCATGTACAAAGTCCACAACTCATCAAGGGAAATGAAAGCCAAAGTCGG

*************************************(((.((.(((.....(((((((.(((((((((((((((.............))))))))))))))))))))))..))))).)))......************************************* 		Read size # Mismatch Hit Count Total Norm Total M056

embryo

 V046

embryo

 M043

female body

 M026

head

 V058

head

 SRR1275484

Male prepupae		 V120

male body		 V052

head

 SRR1275488

Male larvae		 SRR1275486

Male prepupae
....................................................AAAGGAACGATCGTTGTGATATG......................................................................................... 23 0 1 203258.00 203258 192691 10435 64 28 26 0 5 7 2 0
....................................................AAAGGAACGATCGTTGTGATAT.......................................................................................... 22 0 1 76864.00 76864 73957 2786 31 28 25 18 9 4 5 1
....................................................AGAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 11222.00 11222 11214 8 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATA........................................................................................... 21 0 1 10780.00 10780 10411 336 5 21 1 4 0 1 1 0
....................................................AAAGGAACGATCGTTGTGATAC.......................................................................................... 22 1 1 5615.00 5615 5611 4 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 3717.00 3717 3714 2 0 0 1 0 0 0 0 0
..........................................................................................TATCACAGTGATTTTCCTTTAT.................................................... 22 0 1 3667.00 3667 1912 1723 32 0 0 0 0 0 0 0
..........................................................................................TATCACAGTGATTTTCCTTTATA................................................... 23 0 1 3427.00 3427 1986 1428 13 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGAT............................................................................................ 20 0 1 2567.00 2567 2330 194 2 36 1 1 3 0 0 0
....................................................AAATGAACGATCGTTGTGATATG......................................................................................... 23 1 1 2372.00 2372 2371 1 0 0 0 0 0 0 0 0
....................................................ATAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 1761.00 1761 1761 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATATT......................................................................................... 23 1 1 1430.00 1430 1370 60 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGT........................................................................................ 24 1 1 1377.00 1377 1346 28 0 2 1 0 0 0 0 0
....................................................TAAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 1335.00 1335 1333 2 0 0 0 0 0 0 0 0
....................................................AAATGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 1296.00 1296 1294 2 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGATCGTTGTGATATG......................................................................................... 23 1 1 777.00 777 760 17 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGA........................................................................................ 24 1 1 748.00 748 729 18 0 0 1 0 0 0 0 0
....................................................AAAGTAACGATCGTTGTGATATG......................................................................................... 23 1 1 747.00 747 745 2 0 0 0 0 0 0 0 0
....................................................AAAGGGACGATCGTTGTGATATG......................................................................................... 23 1 1 689.00 689 673 16 0 0 0 0 0 0 0 0
....................................................ATAGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 611.00 611 611 0 0 0 0 0 0 0 0 0
....................................................AACGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 555.00 555 551 4 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCTTTGTGATATG......................................................................................... 23 1 1 528.00 528 527 1 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGATA........................................................................................... 21 1 1 526.00 526 526 0 0 0 0 0 0 0 0 0
...........................................................................................ATCACAGTGATTTTCCTTTAT.................................................... 21 0 1 505.00 505 327 177 1 0 0 0 0 0 0 0
...........................................................................................ATCACAGTGATTTTCCTTTATA................................................... 22 0 1 481.00 481 367 111 3 0 0 0 0 0 0 0
....................................................TAAGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 478.00 478 477 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTTATATG......................................................................................... 23 1 1 469.00 469 467 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGC........................................................................................ 24 0 1 426.00 426 407 19 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATAGTTGTGATATG......................................................................................... 23 1 1 403.00 403 395 8 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGAC............................................................................................ 20 1 1 396.00 396 392 0 0 4 0 0 0 0 0 0
....................................................AAAGGAACTATCGTTGTGATATG......................................................................................... 23 1 1 360.00 360 359 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCTTTGTGATAT.......................................................................................... 22 1 1 355.00 355 355 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATATC......................................................................................... 23 1 1 325.00 325 311 14 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGATCGTTGTGATAT.......................................................................................... 22 1 1 312.00 312 305 7 0 0 0 0 0 0 0 0
....................................................AAAGTAACGATCGTTGTGATAT.......................................................................................... 22 1 1 308.00 308 307 1 0 0 0 0 0 0 0 0
....................................................AAAGGTACGATCGTTGTGATATG......................................................................................... 23 1 1 296.00 296 285 11 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGATAC.......................................................................................... 22 2 1 277.00 277 277 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGGGATATG......................................................................................... 23 1 1 259.00 259 251 8 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATATA......................................................................................... 23 1 1 246.00 246 235 11 0 0 0 0 0 0 0 0
....................................................AAAGGAACCATCGTTGTGATATG......................................................................................... 23 1 1 245.00 245 240 4 1 0 0 0 0 0 0 0
....................................................AAAGGGACGATCGTTGTGATAT.......................................................................................... 22 1 1 245.00 245 241 4 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGATAT............................................................................................ 20 2 1 233.00 233 233 0 0 0 0 0 0 0 0 0
....................................................AAAGGAGCGATCGTTGTGATATG......................................................................................... 23 1 1 231.00 231 214 17 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGGTGTGATATG......................................................................................... 23 1 1 231.00 231 213 18 0 0 0 0 0 0 0 0
....................................................AAAGGAACGTTCGTTGTGATATG......................................................................................... 23 1 1 225.00 225 217 8 0 0 0 0 0 0 0 0
....................................................AAAGAAACGATCGTTGTGATATG......................................................................................... 23 1 1 211.00 211 202 9 0 0 0 0 0 0 0 0
....................................................AAAGGAACAATCGTTGTGATATG......................................................................................... 23 1 1 200.00 200 192 7 1 0 0 0 0 0 0 0
.....................................................AAAGAACGATCGTTGTGATATG......................................................................................... 22 1 1 198.00 198 198 0 0 0 0 0 0 0 0 0
....................................................AAACGAACGATCGTTGTGATATG......................................................................................... 23 1 1 196.00 196 192 4 0 0 0 0 0 0 0 0
.....................................................AAGGAACGATCGTTGTGATATG......................................................................................... 22 0 1 193.00 193 185 1 7 0 0 0 0 0 0 0
....................................................AAAAGAACGATCGTTGTGATATG......................................................................................... 23 1 1 190.00 190 177 12 0 0 1 0 0 0 0 0
....................................................AAATGAACGATCGTTGTGATA........................................................................................... 21 1 1 188.00 188 188 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGCTGTGATATG......................................................................................... 23 1 1 187.00 187 157 29 0 0 1 0 0 0 0 0
....................................................AAAGGAACGATCGTTTTGATATG......................................................................................... 23 1 1 179.00 179 177 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTTATAT.......................................................................................... 22 1 1 174.00 174 169 4 0 1 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGGTATG......................................................................................... 23 1 1 169.00 169 132 35 1 0 1 0 0 0 0 0
....................................................AAAGGAACGATCGTTGCGATATG......................................................................................... 23 1 1 167.00 167 128 39 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTAATATG......................................................................................... 23 1 1 167.00 167 162 5 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGTTATG......................................................................................... 23 1 1 167.00 167 158 9 0 0 0 0 0 0 0 0
....................................................AACGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 156.00 156 153 2 0 0 0 0 0 0 1 0
....................................................AAAGGAACGATCGTTGTGA............................................................................................. 19 0 1 153.00 153 139 9 0 4 0 0 0 0 1 0
....................................................AAAGGAACGATCGTTGTGATGTG......................................................................................... 23 1 1 152.00 152 136 16 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATTGTTGTGATATG......................................................................................... 23 1 1 152.00 152 140 12 0 0 0 0 0 0 0 0
....................................................AAGGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 151.00 151 145 6 0 0 0 0 0 0 0 0
....................................................GAAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 150.00 150 141 9 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTCATATG......................................................................................... 23 1 1 147.00 147 136 11 0 0 0 0 0 0 0 0
....................................................AAAGCAACGATCGTTGTGATATG......................................................................................... 23 1 1 146.00 146 144 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATAGTTGTGATAT.......................................................................................... 22 1 1 140.00 140 139 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGAAATG......................................................................................... 23 1 1 138.00 138 137 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGGGATAT.......................................................................................... 22 1 1 135.00 135 133 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTTTGATAT.......................................................................................... 22 1 1 124.00 124 122 0 0 2 0 0 0 0 0 0
..........................................................................................TATCACAGTGATTTTCCTTTAC.................................................... 22 1 1 116.00 116 113 3 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATACG......................................................................................... 23 1 1 116.00 116 101 15 0 0 0 0 0 0 0 0
....................................................AAAGGTACGATCGTTGTGATAT.......................................................................................... 22 1 1 110.00 110 109 1 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGAT............................................................................................ 20 1 1 108.00 108 108 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGACCGTTGTGATATG......................................................................................... 23 1 1 108.00 108 96 12 0 0 0 0 0 0 0 0
....................................................AAAGGAACTATCGTTGTGATAT.......................................................................................... 22 1 1 108.00 108 107 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGAGATG......................................................................................... 23 1 1 107.00 107 85 22 0 0 0 0 0 0 0 0
..........................................................................................TATTACAGTGATTTTCCTTTATA................................................... 23 1 1 103.00 103 102 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTCGTGATATG......................................................................................... 23 1 1 103.00 103 91 12 0 0 0 0 0 0 0 0
....................................................AAAGGAACGGTCGTTGTGATATG......................................................................................... 23 1 1 100.00 100 92 8 0 0 0 0 0 0 0 0
....................................................AAAGGAATGATCGTTGTGATATG......................................................................................... 23 1 1 98.00 98 87 11 0 0 0 0 0 0 0 0
...................................................CAAAGGAACGATCGTTGTGATATG......................................................................................... 24 1 1 95.00 95 91 4 0 0 0 0 0 0 0 0
.................................TTTAACGGGCCGTTCGCTA................................................................................................................ 19 0 1 94.00 94 56 38 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGACATG......................................................................................... 23 1 1 93.00 93 82 11 0 0 0 0 0 0 0 0
..........................................................................................TATCACAGTGATTTTCCTTTA..................................................... 21 0 1 90.00 90 67 20 3 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGGTGTGATAT.......................................................................................... 22 1 1 90.00 90 83 7 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGATATGT........................................................................................ 24 2 1 89.00 89 89 0 0 0 0 0 0 0 0 0
..........................................................................................TGTCACAGTGATTTTCCTTTATA................................................... 23 1 1 89.00 89 89 0 0 0 0 0 0 0 0 0
....................................................ATAGGAACGATCGTTGTGATA........................................................................................... 21 1 1 86.00 86 86 0 0 0 0 0 0 0 0 0
....................................................AAATGAACGATCGTTGTGATAC.......................................................................................... 22 2 1 85.00 85 85 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGATGTGATATG......................................................................................... 23 1 1 85.00 85 73 12 0 0 0 0 0 0 0 0
....................................................AAAGAAACGATCGTTGTGATAT.......................................................................................... 22 1 1 84.00 84 84 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACAATCGTTGTGATAT.......................................................................................... 22 1 1 80.00 80 76 3 1 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTAATAT.......................................................................................... 22 1 1 79.00 79 78 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGAACGTTGTGATATG......................................................................................... 23 1 1 78.00 78 76 2 0 0 0 0 0 0 0 0
..........................................................................................TATTACAGTGATTTTCCTTTAT.................................................... 22 1 1 78.00 78 78 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCATTGTGATATG......................................................................................... 23 1 1 77.00 77 71 6 0 0 0 0 0 0 0 0
....................................................AAAGGAGCGATCGTTGTGATAT.......................................................................................... 22 1 1 77.00 77 72 5 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGTTAT.......................................................................................... 22 1 1 76.00 76 73 3 0 0 0 0 0 0 0 0
....................................................AAAGGAACCATCGTTGTGATAT.......................................................................................... 22 1 1 76.00 76 76 0 0 0 0 0 0 0 0 0
....................................................TAAGGAACGATCGTTGTGATA........................................................................................... 21 1 1 75.00 75 75 0 0 0 0 0 0 0 0 0
..........................................................................................TATCACAGTGATTTTCCTTTATAA.................................................. 24 0 1 73.00 73 36 36 1 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATAA.......................................................................................... 22 1 1 71.00 71 67 4 0 0 0 0 0 0 0 0
....................................................GAAGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 67.00 67 60 7 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATACC......................................................................................... 23 2 1 67.00 67 65 2 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGATATT......................................................................................... 23 2 1 66.00 66 66 0 0 0 0 0 0 0 0 0
....................................................AAACGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 66.00 66 65 1 0 0 0 0 0 0 0 0
....................................................AAAAGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 66.00 66 65 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGTTCGTTGTGATAT.......................................................................................... 22 1 1 64.00 64 63 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGAAAT.......................................................................................... 22 1 1 62.00 62 62 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGCTGTGATAT.......................................................................................... 22 1 1 61.00 61 58 3 0 0 0 0 0 0 0 0
........................................................AAACGATCGTTGTGATATG......................................................................................... 19 1 1 61.00 61 61 0 0 0 0 0 0 0 0 0
..........................................................................................TGTCACAGTGATTTTCCTTTAT.................................................... 22 1 1 60.00 60 59 1 0 0 0 0 0 0 0 0
..........................................................................................TATCACAGTGATTTTCCTTT...................................................... 20 0 1 59.00 59 9 50 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATGT.......................................................................................... 22 1 1 59.00 59 51 8 0 0 0 0 0 0 0 0
.....................................................AAAGAACGATCGTTGTGATAT.......................................................................................... 21 1 1 57.00 57 57 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTATGATATG......................................................................................... 23 1 1 57.00 57 55 2 0 0 0 0 0 0 0 0
.....................................................AAGTAACGATCGTTGTGATATG......................................................................................... 22 1 1 57.00 57 57 0 0 0 0 0 0 0 0 0
....................................................AAAGTAACGATCGTTGTGATA........................................................................................... 21 1 1 55.00 55 55 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGAGATATG......................................................................................... 23 1 1 55.00 55 34 21 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTTATATT......................................................................................... 23 2 1 54.00 54 52 2 0 0 0 0 0 0 0 0
.....................................................AAGGAACGATCGTTGTGATAT.......................................................................................... 21 0 1 53.00 53 50 0 3 0 0 0 0 0 0 0
....................................................AAAGGAACGGTCGTTGTGATAT.......................................................................................... 22 1 1 53.00 53 43 9 0 0 1 0 0 0 0 0
....................................................AAAGGCACGATCGTTGTGATATG......................................................................................... 23 1 1 52.00 52 33 19 0 0 0 0 0 0 0 0
...........................................................................................AGCACAGTGATTTTCCTTTATA................................................... 22 1 1 52.00 52 52 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGATCGTTGTGATA........................................................................................... 21 1 1 52.00 52 50 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGCGATAT.......................................................................................... 22 1 1 52.00 52 46 6 0 0 0 0 0 0 0 0
....................................................AAGGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 50.00 50 49 1 0 0 0 0 0 0 0 0
...................................................CAAAGGAACGATCGTTGTGATAT.......................................................................................... 23 1 1 49.00 49 48 1 0 0 0 0 0 0 0 0
......................................................AGGAACGATCGTTGTGATATG......................................................................................... 21 0 1 49.00 49 49 0 0 0 0 0 0 0 0 0
...........................................................................................AGCACAGTGATTTTCCTTTAT.................................................... 21 1 1 48.00 48 48 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATCTG......................................................................................... 23 1 1 47.00 47 1 45 0 0 1 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGG........................................................................................ 24 1 1 47.00 47 44 3 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGGTAT.......................................................................................... 22 1 1 46.00 46 37 9 0 0 0 0 0 0 0 0
....................................................ATAGGAACGATCGTTGTGATAC.......................................................................................... 22 2 1 46.00 46 46 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATAAG......................................................................................... 23 1 1 44.00 44 37 7 0 0 0 0 0 0 0 0
....................................................AAAGCAACGATCGTTGTGATAT.......................................................................................... 22 1 1 43.00 43 43 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGATCGTTGTGATATT......................................................................................... 23 2 1 43.00 43 42 1 0 0 0 0 0 0 0 0
..........................................................................................TACCACAGTGATTTTCCTTTATA................................................... 23 1 1 43.00 43 43 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATTGTTGTGATAT.......................................................................................... 22 1 1 43.00 43 39 4 0 0 0 0 0 0 0 0
..........................................................................................TACCACAGTGATTTTCCTTTAT.................................................... 22 1 1 42.00 42 40 2 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGATCGTTGGGATATG......................................................................................... 23 2 1 41.00 41 41 0 0 0 0 0 0 0 0 0
......................................................AAGAACGATCGTTGTGATATG......................................................................................... 21 1 1 40.00 40 40 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCTTTGTGATA........................................................................................... 21 1 1 40.00 40 40 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAGGATCGTTGTGATATG......................................................................................... 23 1 1 40.00 40 37 3 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTCGTGATAT.......................................................................................... 22 1 1 39.00 39 36 2 0 0 1 0 0 0 0 0
....................................................AAAGGAACGCTCGTTGTGATATG......................................................................................... 23 1 1 39.00 39 16 23 0 0 0 0 0 0 0 0
.........................................................................................CTATCACAGTGATTTTCCTTTATA................................................... 24 1 1 38.00 38 34 4 0 0 0 0 0 0 0 0
....................................................AAAGGAACGAACGTTGTGATAT.......................................................................................... 22 1 1 38.00 38 36 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGATATG........................................................................................... 21 3 3 38.00 114 114 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGACCGTTGTGATAT.......................................................................................... 22 1 1 38.00 38 34 4 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGATATGA........................................................................................ 24 2 1 38.00 38 38 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAACATCGTTGTGATATG......................................................................................... 23 2 1 38.00 38 38 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGATCGTTGGGATAT.......................................................................................... 22 2 1 37.00 37 37 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGCTATG......................................................................................... 23 1 1 37.00 37 11 26 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCATTGTGATAT.......................................................................................... 22 1 1 37.00 37 34 3 0 0 0 0 0 0 0 0
....................................................TAAGGAACGATCGTTGTGATAC.......................................................................................... 22 2 1 36.00 36 36 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATTTG......................................................................................... 23 1 1 36.00 36 21 15 0 0 0 0 0 0 0 0
....................................................AAAGGAATGATCGTTGTGATAT.......................................................................................... 22 1 1 35.00 35 25 10 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTATGATAT.......................................................................................... 22 1 1 35.00 35 33 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCTTTGTGATAC.......................................................................................... 22 2 1 35.00 35 35 0 0 0 0 0 0 0 0 0
..........................................................................................TATCACAGTGCTTTTCCTTTAT.................................................... 22 1 1 35.00 35 25 10 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGACAT.......................................................................................... 22 1 1 34.00 34 31 2 0 1 0 0 0 0 0 0
...........................................................................................ATAACAGTGATTTTCCTTTAT.................................................... 21 1 1 34.00 34 34 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGATCGTTGTGATAC.......................................................................................... 22 2 1 34.00 34 34 0 0 0 0 0 0 0 0 0
....................................................AAATGAACGATCGTTGTGAT............................................................................................ 20 1 1 33.00 33 33 0 0 0 0 0 0 0 0 0
.....................................................AATGAACGATCGTTGTGATATG......................................................................................... 22 1 1 33.00 33 33 0 0 0 0 0 0 0 0 0
....................................................AAAGGGACGATCGTTGTGATA........................................................................................... 21 1 1 32.00 32 32 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATG........................................................................................... 21 1 1 32.00 32 31 1 0 0 0 0 0 0 0 0
...........................................................................................ATCACAGTGATTTTCCTTTAC.................................................... 21 1 1 30.00 30 30 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGATGTGATAT.......................................................................................... 22 1 1 30.00 30 27 3 0 0 0 0 0 0 0 0
......................................................ATGAACGATCGTTGTGATATG......................................................................................... 21 1 1 30.00 30 30 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCCTTGTGATATG......................................................................................... 23 1 1 30.00 30 28 2 0 0 0 0 0 0 0 0
....................................................AGAGGAAAGATCGTTGTGATATG......................................................................................... 23 2 1 29.00 29 29 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATGGTTGTGATATG......................................................................................... 23 1 1 28.00 28 28 0 0 0 0 0 0 0 0 0
....................................................AGAGTAACGATCGTTGTGATATG......................................................................................... 23 2 1 27.00 27 27 0 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGATATGC........................................................................................ 24 1 1 27.00 27 27 0 0 0 0 0 0 0 0 0
..........................................................................................TATCACAGTGCTTTTCCTTTATA................................................... 23 1 1 27.00 27 16 11 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTTTGATA........................................................................................... 21 1 1 26.00 26 25 1 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGAC............................................................................................ 20 2 1 25.00 25 25 0 0 0 0 0 0 0 0 0
....................................................AAATGAAAGATCGTTGTGATATG......................................................................................... 23 2 1 25.00 25 25 0 0 0 0 0 0 0 0 0
..............................................................................................ACAGTGATTTTCCTTTAT.................................................... 18 0 1 24.00 24 2 22 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTTATATG......................................................................................... 23 2 1 23.00 23 23 0 0 0 0 0 0 0 0 0
.........................................................................................CTATCACAGTGATTTTCCTTTAT.................................................... 23 1 1 23.00 23 22 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTAGTGATATG......................................................................................... 23 1 1 23.00 23 23 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATAGTTGTGATA........................................................................................... 21 1 1 22.00 22 22 0 0 0 0 0 0 0 0 0
...................................................AAAGTGAACGATCGTTGTGATATG......................................................................................... 24 2 1 22.00 22 22 0 0 0 0 0 0 0 0 0
....................................................AGATGAACGATCGTTGTGATATG......................................................................................... 23 2 1 22.00 22 22 0 0 0 0 0 0 0 0 0
....................................................AGAGGAACTATCGTTGTGATATG......................................................................................... 23 2 1 21.00 21 21 0 0 0 0 0 0 0 0 0
....................................................AAAGTAACGATCGTTGTGATAC.......................................................................................... 22 2 1 21.00 21 21 0 0 0 0 0 0 0 0 0
....................................................AGCGGAACGATCGTTGTGATATG......................................................................................... 23 2 1 21.00 21 21 0 0 0 0 0 0 0 0 0
....................................................AAATGAACGATCGTTGTGATATT......................................................................................... 23 2 1 21.00 21 21 0 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCTTTGTGATATG......................................................................................... 23 2 1 21.00 21 21 0 0 0 0 0 0 0 0 0
......................................................AAAAACGATCGTTGTGATATG......................................................................................... 21 2 1 20.00 20 20 0 0 0 0 0 0 0 0 0
..............................................................................................ACAGTGATTTTCCTTTATA................................................... 19 0 1 20.00 20 5 14 1 0 0 0 0 0 0 0
....................................................AAAGGGACGATCGTTGTGATAC.......................................................................................... 22 2 1 20.00 20 20 0 0 0 0 0 0 0 0 0
............................................................................................TCACAGTGATTTTCCTTTAT.................................................... 20 0 1 20.00 20 10 9 1 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATT........................................................................................... 21 1 1 20.00 20 20 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTTATA........................................................................................... 21 1 1 20.00 20 19 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGGTGTGATA........................................................................................... 21 1 1 19.00 19 19 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGGGATA........................................................................................... 21 1 1 19.00 19 18 1 0 0 0 0 0 0 0 0
....................................................AAGTGAACGATCGTTGTGATATG......................................................................................... 23 2 1 19.00 19 19 0 0 0 0 0 0 0 0 0
....................................................CAAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 19.00 19 16 3 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGCTGTGATA........................................................................................... 21 1 1 19.00 19 17 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTCTGATATG......................................................................................... 23 1 1 18.00 18 16 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGAGAT.......................................................................................... 22 1 1 18.00 18 15 3 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTCTGATAT.......................................................................................... 22 1 1 18.00 18 18 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGAGATAT.......................................................................................... 22 1 1 18.00 18 14 4 0 0 0 0 0 0 0 0
.....................................................AATCAACGATCGTTGTGATATG......................................................................................... 22 2 1 18.00 18 18 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGGGATATT......................................................................................... 23 2 1 18.00 18 16 2 0 0 0 0 0 0 0 0
.........................................................AACGATCGTTGTGATATG......................................................................................... 18 0 1 17.00 17 17 0 0 0 0 0 0 0 0 0
....................................................AAATGAACGATCGTTGTGATATGT........................................................................................ 24 2 1 17.00 17 17 0 0 0 0 0 0 0 0 0
....................................................TGAGGAACGATCGTTGTGATATG......................................................................................... 23 2 1 17.00 17 17 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTAGTGATAT.......................................................................................... 22 1 1 17.00 17 17 0 0 0 0 0 0 0 0 0
...........................................................................................ATAACAGTGATTTTCCTTTATA................................................... 22 1 1 17.00 17 17 0 0 0 0 0 0 0 0 0
....................................................AACGGAACGATCGTTGTGATA........................................................................................... 21 1 1 17.00 17 16 1 0 0 0 0 0 0 0 0
....................................................AGAGGAACGTTCGTTGTGATATG......................................................................................... 23 2 1 17.00 17 17 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGATA............................................................................................. 19 2 2 16.50 33 33 0 0 0 0 0 0 0 0 0
....................................................AACGGAACGATCGTTGTGATAC.......................................................................................... 22 2 1 16.00 16 16 0 0 0 0 0 0 0 0 0
.....................................................AAGTAACGATCGTTGTGATAT.......................................................................................... 21 1 1 16.00 16 16 0 0 0 0 0 0 0 0 0
..........................................................................................TTTCACAGTGATTTTCCTTTAT.................................................... 22 1 1 16.00 16 16 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAGGATCGTTGTGATAT.......................................................................................... 22 1 1 16.00 16 16 0 0 0 0 0 0 0 0 0
....................................................AAAGGAGCGATCGTTGTGATA........................................................................................... 21 1 1 16.00 16 16 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCCTTGTGATAT.......................................................................................... 22 1 1 16.00 16 16 0 0 0 0 0 0 0 0 0
..........................................................................................TTTCACAGTGATTTTCCTTTATA................................................... 23 1 1 16.00 16 16 0 0 0 0 0 0 0 0 0
....................................................ATAGGAACGATCGTTGTGAT............................................................................................ 20 1 1 16.00 16 16 0 0 0 0 0 0 0 0 0
................................................GATCAAAGGAACGATCGTTGTGATATG......................................................................................... 27 2 1 15.00 15 15 0 0 0 0 0 0 0 0 0
......................................................AAGAACGATCGTTGTGATAT.......................................................................................... 20 1 1 15.00 15 15 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACTATCGTTGTGATA........................................................................................... 21 1 1 15.00 15 15 0 0 0 0 0 0 0 0 0
....................................................TAAGGAACGATCGTTGTGAT............................................................................................ 20 1 1 15.00 15 15 0 0 0 0 0 0 0 0 0
....................................................AATGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 15.00 15 13 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATGGTTGTGATAT.......................................................................................... 22 1 1 15.00 15 15 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGATAC............................................................................................ 20 3 2 15.00 30 30 0 0 0 0 0 0 0 0 0
..........................................................................................CATCACAGTGATTTTCCTTTATA................................................... 23 1 1 15.00 15 13 2 0 0 0 0 0 0 0 0
....................................................ACAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 15.00 15 9 6 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGTTATG......................................................................................... 23 2 1 15.00 15 15 0 0 0 0 0 0 0 0 0
............................................................................................TCACAGTGATTTTCCTTTATA................................................... 21 0 1 14.00 14 12 1 1 0 0 0 0 0 0 0
....................................................AAAGGAACTATCGTTGTGATAC.......................................................................................... 22 2 1 14.00 14 14 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGGTGTGATAC.......................................................................................... 22 2 1 14.00 14 14 0 0 0 0 0 0 0 0 0
....................................................TAAGGTACGATCGTTGTGATATG......................................................................................... 23 2 1 14.00 14 14 0 0 0 0 0 0 0 0 0
..........................................................................................TATCACAGTGATTTTTCTTTAT.................................................... 22 1 1 14.00 14 6 8 0 0 0 0 0 0 0 0
....................................................AAATGAACGATCGTTGTGAC............................................................................................ 20 2 1 14.00 14 14 0 0 0 0 0 0 0 0 0
....................................................AGAGGAGCGATCGTTGTGATATG......................................................................................... 23 2 1 14.00 14 14 0 0 0 0 0 0 0 0 0
....................................................AAAGGATCGATCGTTGTGATATG......................................................................................... 23 1 1 14.00 14 12 2 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTCATAT.......................................................................................... 22 1 1 14.00 14 13 1 0 0 0 0 0 0 0 0
.......................................................GGAACGATCGTTGTGATATG......................................................................................... 20 0 1 14.00 14 14 0 0 0 0 0 0 0 0 0
...........................................................................................ATCACAGTGATTTTCCTTTATAA.................................................. 23 0 1 13.00 13 10 3 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCTTTGTGATAT.......................................................................................... 22 2 1 13.00 13 13 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGATCGTTGTGATAAG......................................................................................... 23 2 1 13.00 13 13 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTGGTGATATG......................................................................................... 23 1 1 13.00 13 10 3 0 0 0 0 0 0 0 0
....................................................AAAGGTACGATCGTTGTGATA........................................................................................... 21 1 1 13.00 13 13 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGTTA........................................................................................... 21 1 1 13.00 13 12 1 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTTATAC.......................................................................................... 22 2 1 13.00 13 13 0 0 0 0 0 0 0 0 0
....................................................AAAGGTACGATCGTTGTGATATT......................................................................................... 23 2 1 13.00 13 13 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAACATCGTTGTGATAT.......................................................................................... 22 2 1 13.00 13 13 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGTT....................................................................................... 25 2 1 13.00 13 11 2 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGGGATATG......................................................................................... 23 2 1 12.00 12 12 0 0 0 0 0 0 0 0 0
....................................................AAAGGCACGATCGTTGTGATAT.......................................................................................... 22 1 1 12.00 12 11 1 0 0 0 0 0 0 0 0
....................................................AAAGTAACGATCGTTGTGAT............................................................................................ 20 1 1 12.00 12 12 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATC........................................................................................... 21 1 1 12.00 12 9 3 0 0 0 0 0 0 0 0
....................................................AGAGGAAAGATCGTTGTGATAT.......................................................................................... 22 2 1 12.00 12 12 0 0 0 0 0 0 0 0 0
....................................................AGATGAACGATCGTTGTGATAT.......................................................................................... 22 2 1 12.00 12 12 0 0 0 0 0 0 0 0 0
...........................................................................................ATCACAGTGATTTTCCTTTA..................................................... 20 0 1 12.00 12 11 1 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGATCGTTGTGATAA.......................................................................................... 22 2 1 12.00 12 12 0 0 0 0 0 0 0 0 0
....................................................AAAGAAACGATCGTTGTGATA........................................................................................... 21 1 1 12.00 12 12 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATAGG......................................................................................... 23 1 1 12.00 12 9 3 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTTTGATAC.......................................................................................... 22 2 1 12.00 12 12 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGCTCGTTGTGATAT.......................................................................................... 22 1 1 12.00 12 5 6 0 0 1 0 0 0 0 0
....................................................AGAGGAAAGTTCGTTGTGATATG......................................................................................... 23 3 1 12.00 12 12 0 0 0 0 0 0 0 0 0
....................................................AGAGGGACGATCGTTGTGATATG......................................................................................... 23 2 1 12.00 12 12 0 0 0 0 0 0 0 0 0
.....................................................AAGGAACGATCGTTGTGATAC.......................................................................................... 21 1 1 11.00 11 11 0 0 0 0 0 0 0 0 0
.......................................................AAAACGATCGTTGTGATATG......................................................................................... 20 2 1 11.00 11 11 0 0 0 0 0 0 0 0 0
....................................................ATAGGAACGATCGTTGTGATATGA........................................................................................ 24 2 1 11.00 11 11 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATTT.......................................................................................... 22 1 1 11.00 11 6 4 0 0 1 0 0 0 0 0
....................................................AAAGGAATGATCGTTGTGATA........................................................................................... 21 1 1 11.00 11 9 2 0 0 0 0 0 0 0 0
....................................................AGAGGAACAATCGTTGTGATATG......................................................................................... 23 2 1 11.00 11 11 0 0 0 0 0 0 0 0 0
..........................................................................................TATCACAGCGATTTTCCTTTAT.................................................... 22 1 1 11.00 11 8 3 0 0 0 0 0 0 0 0
......................................................AGGAACGATCGTTGTGATAT.......................................................................................... 20 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGATATC......................................................................................... 23 2 1 11.00 11 11 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATATTT........................................................................................ 24 2 1 11.00 11 11 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGAT....................................................................................... 25 2 1 11.00 11 11 0 0 0 0 0 0 0 0 0
....................................................AAAAGAACGATCGTTGTGATA........................................................................................... 21 1 1 11.00 11 11 0 0 0 0 0 0 0 0 0
.....................................................TAGGAACGATCGTTGTGATATG......................................................................................... 22 1 1 11.00 11 11 0 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTTTGATATG......................................................................................... 23 2 1 11.00 11 11 0 0 0 0 0 0 0 0 0
....................................................ATAGGAAAGATCGTTGTGATATG......................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0
..........................................................................................GATCACAGTGATTTTCCTTTATA................................................... 23 1 1 10.00 10 8 2 0 0 0 0 0 0 0 0
...........................................................................................ATCTCAGTGATTTTCCTTTAT.................................................... 21 1 1 10.00 10 10 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGTTCGTTGTGATATG......................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0
....................................................AAAGGAAAGATCGTTGTTATATG......................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0
.........................................................................................CGATCACAGTGATTTTCCTTTAT.................................................... 23 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATTGTTGTGATA........................................................................................... 21 1 1 10.00 10 10 0 0 0 0 0 0 0 0 0
....................................................AGAGCAACGATCGTTGTGATATG......................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACCATCGTTGTGATA........................................................................................... 21 1 1 10.00 10 9 1 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGATATA......................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0
..........................................................................................TATCACAGCGATTTTCCTTTATA................................................... 23 1 1 10.00 10 8 2 0 0 0 0 0 0 0 0
....................................................AGAGAAACGATCGTTGTGATATG......................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0
.....................................................AGGGAACGATCGTTGTGATATG......................................................................................... 22 1 1 10.00 10 10 0 0 0 0 0 0 0 0 0
....................................................AAAGGAACGATCGTTGTGATCT.......................................................................................... 22 1 1 10.00 10 1 9 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTAATATG......................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0
....................................................AGAGGAACGATCGTTGTGGTATG......................................................................................... 23 2 1 9.00 9 9 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCCCAGTTCTTTAGCTCAATTCACAAGGGGGTTAAATTGCCCGGCAAGCGATTTTCCTTGCTAGCAACACTATACGCAATAAGGGATTGTATAGTGTCACTAAAAGGAAATATTGCGTACATGTTTCAGGTGTTGAGTAGTTCCCTTTACTTTCGGTTTCAGCC

*************************************(((.((.(((.....(((((((.(((((((((((((((.............))))))))))))))))))))))..))))).)))......************************************* 		Read size # Mismatch Hit Count Total Norm Total M056

embryo

 M043

female body
........................................................................................GTATAGTGTTGCTACAAGGAAA...................................................... 22 3 3 21.33 64 64 0
.........................................................................................TATAGTGTTGCTACAAGGAAA...................................................... 21 3 5 3.80 19 19 0
........................................................................................GTATAGTGTCGCTACAAGGAAA...................................................... 22 2 1 1.00 1 1 0
........................................................................................GTATAGTGTTGCTAGAAGGAAA...................................................... 22 3 2 1.00 2 2 0
..........................................................................................ATAGTGTTGCTACAAGGAAA...................................................... 20 3 12 0.50 6 6 0
.................................................GATTTTGCTTGCTAGCAGCC............................................................................................... 20 3 2 0.50 1 0 1
........................................................................................GTATAGTGTTGCTATAAGGAAA...................................................... 22 3 5 0.20 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droYak3 2R:13624012-13624175 + dya-mir-5 Known_mirbase CGGGTCAAGAAAT-------C--G---A---GTT--A-AGTG-----------TTCCCCC-A-------------A-TTTAACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TCC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGTACAA--AGTCCACAACTCATCAA-GGGAAATGAAAG--CCAAA-----GTCGG---------------------------
droEre2 scaffold_4845:9748866-9749030 - der-mir-5 Known_mirbase AGAGTTAGCAAAT-------C--C---A---GTT--A-AGTG-----------ATCCCCT-A-------------A-TTTGACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGTAAAA--AGTCCAAAACTCATCAATGGGAAATGAAAG--CCAAA-----GTTGC---------------------------
droSec2 scaffold_1:13063347-13063508 - dse-mir-5 Known_mirbase CAAGTCAGGAAAT-------C--A---A---GTT--A-AGTG-----------ATCCCCA-A-------------A-TTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TCC----CGAACATATCACAGTGATTTTCCTTTATAACGCATGTTTAA--AGTCCACAATTCATCAA-GGAAAATTA-AG--CC-AA-----GTTGG---------------------------
droSim2 2r:16195889-16196050 - dsi-mir-5 Known_mirbase CAAGTCAAGAAAT-------C--A---A---GTT--A-AGTT-----------ATCACCA-A-------------A-TTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TCC-----CAACATATCACAGTGATTTTCCTTTATATCGCATGTTAAA--AGTCCACAATTCATCAA-GGAAAATGAAAG--CC-AA-----GTTGG---------------------------
dm3 chr2R:15548616-15548779 - dme-mir-5 Known_mirbase CGAGTCAAGAAAT-------T--A---T---GTT--A-AGTG-----------ATCCCCA-A-------------A-TTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TTC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGTTTAA--AGTCCACAACTCATCAA-GGAAAATGAAAG--TCAAA-----GTTGG---------------------------
droEug1 scf7180000409474:2397089-2397237 + TCAAG-------C-------C--A---A---GTT--A-AGTG-----------TTACCAA-A-------------A-CTACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTCT-TTT----GTTACATATCACAGTGATTTTCCTTTGTAACGCATGTCTAA--TGCCCACTATTCATCAA-GGTTATTAA---------------ACTAA---------------------------
droBia1 scf7180000302143:3059519-3059681 - CAAGCCA-TAAAT-------C--A---A---TTT--G-AGTG-----------ATCCCCA-C-------------G-TATCTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----GTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCATGA--AGCCCAAAGCTCATCAA-GGGAAATACCAT--CCGAA-----ATTAC---------------------------
droTak1 scf7180000415384:84298-84447 + CAAGCCAGTGAAT-------T--A---A---GTT--G-AGTG-----------ATCCCAG-C-------------A-TAACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----GTTACATATCACAGTGATTTTCCTTTATAACGCATGTCTTA--AGCCCCAAAAACATCAA-GGGATATA------------------------------------------------
droEle1 scf7180000491201:2013690-2013853 - CAAGCCAATACAA-------A--A---A---GTT--G-AGTG-----------AACCCCG-C-------------T-TACTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TCC----TTAACATATCACAGTGATTTTCCTTTATAGCGCATGTCT-G--AGCCCAAAACTCATCGATGGGAAATACAAT--CCAAA-----AACAG---------------------------
droRho1 scf7180000780066:73902-74064 + CAATTCAATAAAA-------C--A---A---GTT--G-AGTG-----------ATCCCTA-C-------------A-TTTTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TCC----GTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT-G--AGCCCAATACTCATCGA-GGGAAATAAGAT--TCGAA-----ATTAT---------------------------
droFic1 scf7180000454039:847757-847911 - A----------AT-------A--A---A---GTT--T-AGTG-----------ATTCCTA-A-------------A-GTACACGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TTA----GTTACATATCACAGTGATTTTCCTTTATAACGCATGTCG-T--TGTCCAAAGCTCATCAA-AGGAAAAAACATACTTAAA-----GTTAC---------------------------
droKik1 scf7180000302679:89056-89221 - TA-TTCAGGATAT-------G--TCCTAA--ACC--A-AGTG-----------ATATCTCAA-------------GCTAACCAGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTT-TCC--CCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTTC-A--AGTCCAAGATTCAACGA-TTG--ATCAGTT--CTAAG-----GTT-----------------------------
droAna3 scaffold_13266:9731641-9731793 + dan-mir-5 Known_mirbase CTATTCGAAAAAA-------A--A---T---GTA--A-AATA-----------------------------------TTCTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TCC-CTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGCAG-T--TGTCCAAAATGCATCAA-AAATAACGAGT------TA-----GGTGA---------------------------
droBip1 scf7180000396427:874585-874755 + AAATTTAAAAAAT-------T--A---AATAAAA--A-AGTG-----------AA------A-------------TATCCTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TCC-CTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGTCA-T--TGTCCAAAATTCATCAG-AGAT-----------C-GAGTT-AG-TGACTTGA---------A-----GGAGTCG
dp5 3:12677191-12677370 - dps-mir-5 Known_mirbase CCCACCCTCACAT-------C--C---A---TCC--C-AGTGTCATTGATTAGTTCCC-A-A-------------CTTCCTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TTC-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT-G--CGCCCACAGCCACACAT-GGGAAACGAAACGCTCAGC--G--GTGGA---------------------------
droPer2 scaffold_2:8906302-8906481 + dpe-mir-5 Known_mirbase CCCACCCTCACAT-------C--C---A---TCC--C-AGTGTCATTGATTAGCTCCC-A-A-------------CTTCCTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TTC-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT-G--CGCCCACAGCCACACAT-GGGAAACGAAACACTCAGC-----GATGG--------------A------------
droWil2 scf2_1100000004514:1651427-1651592 - dwi-mir-5 Known_mirbase GGAC-------ATCAATAGCA--A---A---GTT--C-A----------------------AGTTTCATCGTCGTTTTTTTCTGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAGATTC-ACCGTTATATATCACAGTGATTTTCCTTTATAGCGCATGCATGTTCTGTCCAATA--TATCAA-CAAT-AT-------CCAGC--AAAGT------------------------------
droVir3 scaffold_12875:4112412-4112590 + dvi-mir-5 Known_mirbase TCTGACCATATAT-------A--T---A---TCTGAT-ATTCTCGTATACTATA-------T-------------A-TAAATTGGGTCATGCTCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TTA-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCA------GCCCGTAAAGCAACAC-CACATACGA---------T-----CTA-------TATCCATGTCTATATA----GA
droMoj3 scaffold_6496:20936409-20936602 - dmo-mir-5 Known_mirbase TATATATATACAT-------C--T---A---TGA--AAAGTTTTTATGA-AAGTTCA----AAATGCAAACTCG---ATGAATGGGCCATGCGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TCG-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCA------GTCCCCCAGACTACAA-T----ATGAATG--TGAAT-----ATT-------TATAAGTGTATATATA----TT
droGri2 scaffold_5621:3081-3239 + dgr-mir-5-2 Known_mirbase TAGTGTA-TATAA-------TATTCCTGA--TAT--A-TGTG-----------TT----AAA-------------GTCGTTATGGGTCACTCGCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TTAAATCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCTC----TGCCCAAAACTCAACTA------------A--CCAGT-----GTTGA--------------A------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
CGGGTCAAGAAAT-------C--G---A---GTT--A-AGTG-----------TTCCCCC-A-------------A-TTTAACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TCC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGTACAA--AGTCCACAACTCATCAA-GGGAAATGAAAG--CCAAA-----GTCGG---------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................231203258.0020325828641926911043572652000
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................22176864.00768642831739572786425951180
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................21110780.0010780215104113361101040
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................2215615.00561500561140000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................2213667.003667032191217230000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................2313427.003427013198614280000000
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................2012567.00256736223301940130010
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................2311430.001430001370600000000
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................2411377.001377201346280100000
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................241748.0074800729180100000
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................211505.00505013271770000000
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................221481.00481033671110000000
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................241426.0042600407190000000
................................................................................................AAAGGAACGATCGTTGTGAC......................................................................................................................................201396.003964039200000000
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................231325.0032500311140000000
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................231246.0024600235110000000
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................221193.001930718510000000
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................191153.001534013990001000
...........................................................................................................................................TATCACAGTGATTTTCCTTTAC.........................................................................................221116.001160011330000000
.............................................................................TTTAACGGGCCGTTCGCTA..........................................................................................................................................................19194.00940056380000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................21190.00900367200000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................24173.00730136360000000
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................22171.0071006740000000
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................23167.0067006520000000
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................20159.0059009500000000
.................................................................................................AAGGAACGATCGTTGTGATAT....................................................................................................................................21153.0053035000000000
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................21149.0049004900000000
................................................................................................AAAGGAACGATCGTTGTGATATGG..................................................................................................................................24147.0047004430000000
................................................................................................AAAGGAACGATCGTTGTGATG.....................................................................................................................................21132.0032003110000000
............................................................................................................................................ATCACAGTGATTTTCCTTTAC.........................................................................................21130.0030003000000000
...............................................................................................................................................ACAGTGATTTTCCTTTAT.........................................................................................18124.0024002220000000
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................19120.0020015140000000
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................20120.0020011090000000
................................................................................................AAAGGAACGATCGTTGTGATT.....................................................................................................................................21120.0020002000000000
.....................................................................................................AACGATCGTTGTGATATG...................................................................................................................................18117.0017001700000000
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................21114.0014011210000000
...................................................................................................GGAACGATCGTTGTGATATG...................................................................................................................................20114.0014001400000000
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................23113.0013001030000000
................................................................................................AAAGGAACGATCGTTGTGATATGTT.................................................................................................................................25113.0013001120000000
................................................................................................AAAGGAACGATCGTTGTGATC.....................................................................................................................................21112.001200930000000
............................................................................................................................................ATCACAGTGATTTTCCTTTA..........................................................................................20112.0012001110000000
.................................................................................................AAGGAACGATCGTTGTGATAC....................................................................................................................................21111.0011001100000000
..................................................................................................AGGAACGATCGTTGTGATAT....................................................................................................................................20111.0011001100000000
................................................................................................AAAGGAACGATCGTTGTGATATTT..................................................................................................................................24111.0011001100000000
................................................................................................AAAGGAACGATCGTTGTGATATGAT.................................................................................................................................25111.0011001100000000
droEre2
AGAGTTAGCAAAT-------C--C---A---GTT--A-AGTG-----------ATCCCCT-A-------------A-TTTGACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGTAAAA--AGTCCAAAACTCATCAATGGGAAATGAAAG--CCAAA-----GTTGC---------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................2316818.00681811512632230038166
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................2213303.003303361170401233140
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................2212638.00263830013661954980
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................2312516.00251651214570545020
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................211465.00465282610174110
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................211324.00324481520123010
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................221229.0022952143034000
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................201229.002294740145240
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................231194.001948280158000
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................221112.00112110803000
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................221109.00109107101000
...........................................................................................................................................TATCACAGTGATTTTCCTTTAC.........................................................................................221103.0010309904000
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................21166.00661534017000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................24165.00651032023000
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................24155.005534209100
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................23143.0043414025000
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................20137.003718028000
.................................................................................................AAGGAACGATCGTTGTGATAT....................................................................................................................................21134.003431201000
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................24130.003061608000
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................24119.001901207000
.............................................................................TTTGACGGGCCGTTCGCTA..........................................................................................................................................................19117.001740013000
...............................................................................................................................................ACAGTGATTTTCCTTTAT.........................................................................................18116.001601015000
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................19113.00130606010
............................................................................................................................................ATCACAGTGATTTTCCTTTAC.........................................................................................21111.001101100000
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................23110.00103403000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAT.......................................................................................24110.00101306000
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................23110.00100901000
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................2319.0092007000
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................2018.0082204000
................................................................................................AAAGGAACGATCGTTGTGAC......................................................................................................................................2017.0070700000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAC.......................................................................................2416.0060600000
...........................................................................................................................................TATCACAGTGATTTTCCTT............................................................................................1916.0061104000
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................2116.0060501000
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................1915.0050203000
................................................................................................AAAGGAACGATCGTTGTGATATGTT.................................................................................................................................2514.0040102100
................................................................................................AAAGGAACGATCGTTGTGATACT...................................................................................................................................2314.0040103000
................................................................................................AAAGGAACGATCGTTGTG........................................................................................................................................1814.0040102010
...........................................................................................................................................TATCACAGTGATTTTCCTTTATG........................................................................................2314.0041201000
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................2114.0043100000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATT........................................................................................2313.0030201000
...................................................................................................GGAACGATCGTTGTGATATG...................................................................................................................................2013.0033000000
............................................................................................................................................ATCACAGTGATTTTCCTTTATT........................................................................................2213.0030102000
..............................................................................................................................................CACAGTGATTTTCCTTTATA........................................................................................2013.0031200000
..............................................................................................................................................CACAGTGATTTTCCTTTAT.........................................................................................1913.0031101000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATC........................................................................................2313.0030102000
.....................................................................................................AACGATCGTTGTGATATG...................................................................................................................................1812.0020002000
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................2212.0020101000
.................................................................................................AAGGAACGATCGTTGTGAT......................................................................................................................................1912.0021100000
................................................................................................AAAGGAACGATCGTTGTGATATTA..................................................................................................................................2412.0020002000
....................................................................................................GAACGATCGTTGTGATATG...................................................................................................................................1912.0021001000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAAA......................................................................................2512.0020101000
.............................................................................................................................................TCACAGTGATTTTCCTTTATAA.......................................................................................2212.0021001000
................................................................................................AAAGGAACGATCGTTGTGATG.....................................................................................................................................2112.0021100000
...........................................................................................................................................TATCACAGTGATTTTCCT.............................................................................................1812.0020001010
..................................................................................................AGGAACGATCGTTGTGATAT....................................................................................................................................2012.0022000000
................................................................................................AAAGGAACGATCGTTGTGATAAT...................................................................................................................................2312.0020002000
droSec2
CAAGTCAGGAAAT-------C--A---A---GTT--A-AGTG-----------ATCCCCA-A-------------A-TTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TCC----CGAACATATCACAGTGATTTTCCTTTATAACGCATGTTTAA--AGTCCACAATTCATCAA-GGAAAATTA-AG--CC-AA-----GTTGG---------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................23128672.00286723921527808457
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................2217289.00728995226980192
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................2211700.001700861159419
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................2111183.0011839211666
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................201899.008992487419
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................231631.00631184042324
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................221177.001774401330
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................211174.001741501581
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................241139.00139301351
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................241109.00109201070
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................23197.009711923
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................22175.0075280443
..............................................................................................TAAAAGGAACGATCGTTGTGAT......................................................................................................................................22166.006600660
.............................................................................TTCATCGGGCCATTCGCTA..........................................................................................................................................................19166.006650547
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................24157.005700561
.................................................................................................AAGGAACGATCGTTGTGATAT....................................................................................................................................21143.004370351
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................23140.004010381
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................24134.003460280
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................19131.003110300
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................23131.003100310
................................................................................................AAAGGAACGATCGTTGTG........................................................................................................................................18127.002700270
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................20127.002720241
...........................................................................................................................................TATCACAGTGATTTTCCT.............................................................................................18126.002600251
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................21123.002320210
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................22122.002200220
................................................................................................AAAGGAACGATCGTTGTGATATGTT.................................................................................................................................25116.001601150
...............................................................................................................................................ACAGTGATTTTCCTTTAT.........................................................................................18113.001300130
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................20110.001000100
..............................................................................................TAAAAGGAACGATCGTTGTGATA.....................................................................................................................................23110.001000100
................................................................................................AAAGGAACGATCGTTGTGATG.....................................................................................................................................2118.0080080
.................................................................................................AAGGAACGATCGTTGTGATA.....................................................................................................................................2017.0071060
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................2316.0060060
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................2116.0064020
................................................................................................AAAGGAACGATCGTTGTGATATGAA.................................................................................................................................2515.0050050
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................1915.0050050
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................2114.0043010
...........................................................................A-TTCATCGGGCCATTCGCTA..........................................................................................................................................................2014.0040040
....................................................................................................GAACGATCGTTGTGATATG...................................................................................................................................1914.0040040
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................2213.0030030
....................................................................................................GAACGATCGTTGTGATAT....................................................................................................................................1813.0030030
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................2313.0030030
.....................................................................................................AACGATCGTTGTGATATG...................................................................................................................................1813.0030030
................................................................................................AAAGGAACGATCGTTGTGATT.....................................................................................................................................2113.0030030
................................................................................................AAAGGAACGATCGTTGTGATATGGT.................................................................................................................................2512.0020020
..................................................................................................AGGAACGATCGTTGTGATAT....................................................................................................................................2012.0021010
..............................................................................................TAAAAGGAACGATCGTTGTGATAT....................................................................................................................................2412.0020011
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAT.......................................................................................2412.0020020
................................................................................................AAAGGAACGATCGTTGTGATATGTA.................................................................................................................................2512.0020020
...............................................................................................AAAAGGAACGATCGTTGTGAT......................................................................................................................................2112.0020020
..............................................................................................TAAAAGGAACGATCGTTGTGA.......................................................................................................................................2112.0020020
................................................................................................AAAGGAACGATCGTTGTGATAG....................................................................................................................................2212.0020020
................................................................................................AAAGGAACGATCGTTGTGATATGG..................................................................................................................................2412.0020020
................................................................................................AAAGGAACGATCGTTGTGATATGAT.................................................................................................................................2512.0020011
................................................................................................AAAGGAACGATCGTTGTGATATTTT.................................................................................................................................2511.0010010
............................................................................................................................................ATCACAGTGATTTTCCTT............................................................................................1811.0010010
...........................................................A-A-------------A-TTCATCGGGCCATTCGCTA..........................................................................................................................................................2211.0010010
................................................................................................AAAGGAACGATCGTTGTTC.......................................................................................................................................1911.0010010
............................................................................................................................................ATCACAGTGATTTTCCTTTATAG.......................................................................................2311.0010010
.................................................................................................................................................AGTGATTTTCCTTTATAA.......................................................................................1811.0010010
...........................................................................................................................................TATCACAGTGATTTTCCTTATA.........................................................................................2221.0020020
................................................................................................AAAGGAACGATCGTTGTGATACT...................................................................................................................................2311.0010010
.............................................................................................CTAAAAGGAACGATCGTTGTGAT......................................................................................................................................2311.0010010
................................................................................................AAAGGAACGATCGTTGTGATATTT..................................................................................................................................2411.0010010
................................................................................................AAAGGAACGATCGTTGTGT.......................................................................................................................................1911.0010010
droSim2
CAAGTCAAGAAAT-------C--A---A---GTT--A-AGTT-----------ATCACCA-A-------------A-TTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TCC-----CAACATATCACAGTGATTTTCCTTTATATCGCATGTTAAA--AGTCCACAATTCATCAA-GGAAAATGAAAG--CC-AA-----GTTGG---------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................231153742.001537429463548381180010874145074440006315824125397001
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................221122204.00122204876453472531332012331001341923219911406957320
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................21136713.00367131053228658501132193673382332396103004
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................20110151.0010151198418774301874443142318336002
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................2314563.00456300714317418150214390145100000
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................2213927.00392700754117307186970237705030
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................2411342.001342108801002219723202403000
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................2411338.001338139561002013221402603000
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................221927.0092700340240327463012400000
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................221851.00851118030000021190204000
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................211808.0080800861300252228030910000
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................231712.007120032600033152126040062000
................................................................................................AAAGGAACGATCGTTGTGATATGG..................................................................................................................................241347.003470134500000010000000
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................191321.0032181209005303137311013000
................................................................................................AAAGGAACGATCGTTGTGAC......................................................................................................................................201278.002786027100000000100000
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................231247.00247009900000626911600000
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................241222.00222001130003155390902000
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................231218.0021800960002050490849000
..............................................................................................TAAAAGGAACGATCGTTGTGAT......................................................................................................................................221217.00217001620003022240600000
..............................................................................................TAAAAGGAACGATCGTTGTGATA.....................................................................................................................................231182.0018200690001149620000000
................................................................................................AAAGGAACGATCGTTGTGATAG....................................................................................................................................221180.001801017600000010101000
.............................................................................TTCATCGGGCCATTCGCTA..........................................................................................................................................................191159.001590114900010010700000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................241152.00152001010020344006500000
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................221121.00121128100010101101113000
................................................................................................AAAGGAACGATCGTTGTGATG.....................................................................................................................................211116.001160010700010160100000
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................231111.001110095000001130200000
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................22193.0093003314000031140100000
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................20179.007900000010201704100000
.................................................................................................AAGGAACGATCGTTGTGATAT....................................................................................................................................21170.0070002512000015170100000
................................................................................................AAAGGAACGATCGTTGTGG.......................................................................................................................................19169.0069006800000100000000
.................................................................................................................................................AGTGATTTTCCTTTATA........................................................................................17167.00670000000049180000000
................................................................................................AAAGGAACGATCGTTGTGAG......................................................................................................................................20165.0065006500000000000000
.....................................................................................................AACGATCGTTGTGATATG...................................................................................................................................18156.0056004100000681000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................21147.0047004103103403001000
................................................................................................AAAGGAACGATCGTTGTGATATTT..................................................................................................................................24133.0033000000101100030000
....................................................................................................GAACGATCGTTGTGATAT....................................................................................................................................18129.0029002400000140000000
...........................................................................................................................................TATCACAGTGATTTTCCTT............................................................................................19129.0029000012003210200000
................................................................................................AAAGGAACGATCGTTGTG........................................................................................................................................18126.00260020010011110100000
................................................................................................AAAGGAACGATCGTTGTGATATGAA.................................................................................................................................25126.0026001300000670000000
..................................................................................................AGGAACGATCGTTGTGATAT....................................................................................................................................20125.0025001610000350000000
...................................................................................................GGAACGATCGTTGTGATATG...................................................................................................................................20123.002300810000680000000
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................21123.002300900000770000000
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................21121.002100200100750600000
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................19120.0020000000000301700000
...............................................................................................AAAAGGAACGATCGTTGTGATAT....................................................................................................................................23119.0019001100000530000000
....................................................................................................GAACGATCGTTGTGATATG...................................................................................................................................19119.001900600000480100000
...............................................................................................................................................ACAGTGATTTTCCTTTAT.........................................................................................18118.0018000000000001800000
................................................................................................AAAGGAACGATCGTTGTGATATGTT.................................................................................................................................25118.0018001400000010300000
...................................................................................................GGAACGATCGTTGTGATAT....................................................................................................................................19116.0016001200000220000000
................................................................................................AAAGGAACGATCGTTGTGATATGAT.................................................................................................................................25115.0015001300000000101000
.................................................................................................AAGGAACGATCGTTGTGATA.....................................................................................................................................20114.0014001200000110000000
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................23114.001400100001450300000
................................................................................................AAAGGAACGATCGTT...........................................................................................................................................15114.001400000001670000000
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................20113.001300000000240700000
................................................................................................AAAGGAACGATCGTTGTGATAAA...................................................................................................................................23112.001202400000310002000
...........................................................................................................................................TATCACAGTGATTTTCCT.............................................................................................18111.001100000300110600000
.....................................................................................................AACGATCGTTGTGATAT....................................................................................................................................17111.001100000000362000000
..................................................................................................AGGAACGATCGTTGTGAT......................................................................................................................................18111.0011001100000000000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAAA......................................................................................25110.001000110000220400000
.................................................................................................AAGGAACGATCGTTGTGAT......................................................................................................................................19110.001000900000000100000
................................................................................................AAAGGAACGATCGTTG..........................................................................................................................................16110.001000000000451000000
................................................................................................................................................CAGTGATTTTCCTTTATA........................................................................................1819.00900000000270000000
................................................................................................AAAGGAACGATCGTTGTGATT.....................................................................................................................................2119.00900700000010001000
..................................................................................................................................................GTGATTTTCCTTTATA........................................................................................1618.00800000000620000000
...................................................................................................GGAACGATCGTTGTGATA.....................................................................................................................................1818.00800300000140000000
.................................................................................................................................................AGTGATTTTCCTTTAT.........................................................................................1618.00800000000800000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATC........................................................................................2317.00700000000100600000
..................................................................................................AGGAACGATCGTTGTGATA.....................................................................................................................................1917.00700600000010000000
...............................................................................................AAAAGGAACGATCGTTGTGAT......................................................................................................................................2117.00700600000010000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATT........................................................................................2316.00600000000100500000
...........................................................................A-TTCATCGGGCCATTCGCTA..........................................................................................................................................................2016.00600600000000000000
............................................................................................................................................ATCACAGTGATTTTCCTTTA..........................................................................................2016.00600010100010300000
.............................................................................................................................................TCACAGTGATTTTCCTTTATAA.......................................................................................2216.00600000000320100000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAT.......................................................................................2416.00600000000110400000
................................................................................................AAAGGAACGATCGTTGTGATATGTC.................................................................................................................................2515.00500400000010000000
dm3
CGAGTCAAGAAAT-------T--A---T---GTT--A-AGTG-----------ATCCCCA-A-------------A-TTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TTC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGTTTAA--AGTCCACAACTCATCAA-GGAAAATGAAAG--TCAAA-----GTTGG---------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................2311000024.0010000240000901821884576116301200000040800820100000160193341410313501291331312123283000000000000000000000000310002855254128050921826560333216124120292013211110140114164381100298013111308391201099320100000000317008361651676532916740257211326171960291844303132101170961026570110091106193161172122042757710201068411285361256823090001626134323717341362717439223715962172162713000002114310650822047323056732361729321051383712937514337201744291892317691515232238192625671914625156684134716100361322331910751721781201532184255710251163817812521113750724101643111010240
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................221136122.001361220000315486131818440100000000250023010000010260311018160215434010460270000000000000000000001533014815163157326372793224694121511632119385701311313013500015742061680032000110010000000003200394198921522265396804151118471132010120060021440111024110516225615002207317411000106980310415912522400036201017208122315523134361563139114534652283000044243866322250215214010055801140520547304643522243322164101277101371110118864342137322613504124215441183334523424716910822278146110136123681264828107316111660
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................23147228.004722800002052527178241000000000000001020051101390000000000000002110003000000000000000000010111123512521450726201220810411310400933859031820631091119548845030350003510000700000000000243658749103356300010000000000000000153809429130503015100010310001000000000000000000000510000396512120183961788150110000028718910000000006001021910000000000101001000301100001010146811741140030100001632101010000100002028381101100
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................22117174.00171740000207951181031110000000001000100000001900000002071000100100012000000000000000000431401898770160622711773267760316024722632111711038572041001334423502000011404066000000000010941389921014000000570000000000000153201620816012061152024005901020000000000000000000000001002880215082439626160214000054442602110021026101121400010000000411071402166900203212531649291040130000012420160200002010040910140212220
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................21113538.0013538000000440323900100000000020010000000010160100012301000100300000100000000000000000000100040613918776144002030021001153640052105000121400340000000000000010000000009445885112922130111100305100050010039011000110220001001330110000020013050730000001110102111012650463271019000090551702000000201000026100001211123112118062101421134334332573757329138011204122226418220414030080948370412150
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................20111581.0011581000000000200000000000000001000000086480000000108000002000000000000000000000000001100422016000001000100010000000000002200000000000000000001000000464144381012000032000000003001000202000010000040031012001000000114050500000100096623283512070121700150000146133002200011020301313020003000004000219041100523212213542011614113110024355361072085458714347211103225986731259440
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................2316896.006896000000052000000000000000000000000030001011102010000000000000000000000000000000000885123345641210001000100100000000230106009000000000000000000000000117836878104520011000000000010000010000000010000000121100010000000011003000000000002000100050382020000268811000000000000001110010000010202001020100001000011204318101201010020102020004010050100200780301000
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................2213934.003934000000844174000000000000000000000000400000000000000000000000000000000000000000000009124212142341940012040000013011000122300005940470000000030000000000000001754506012000000000000000000000613000101110000000000500000000002000000000000000000002309041090000000003619000000000000000150000000000000000000000100000000112302611000000000050000000000000000101060000100
.............................................................................TTCATCGGGCCATTCGCTA..........................................................................................................................................................1912959.0029590000000000000000000000000000000000420000000000000000000000000000000000000000000000300132141239201000200200201010000044653004721158000000000000000000000000242209488136230000000000000000000000000000000100100000000000000001000000000000000000000000001010000000037220000001000000000100000000000000000000000000000001560200000000000000000000001000000000010000000
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................2112939.00293900000032014600000000000000000000000090000000000000000000001010000000000000000000000546151331425610001000340072310010062110068100420000000000000000000000001757108356100000000000000000000050210211101050000008000100000000000000000000000000011306237064000100005461000000000010000010000000001000001700030000000100057611000000020000000000001010000000000400000100
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................2312237.0022370000004840000000000000000000000000000000000010000000000000000000000000000000000001075047000000000000000020000000002003000000000000000000000000261771995681010000010000000000000001000000000000000010001000000000000000000001000000000004020000000037260000000000000000100000000000000024000101000000001135812100000210000000000001001010000000520000010
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................2411676.001676000000167000000000000000000000000010000000001000000000000000000000000000000000000371987851001000000002000000000000014107000000000010000000000000413252101000000000000000000000000000000000000000001000000001807000300000000000001010102604000000003935000000000000000010000000000000000014240201000000084033700000100000001021010110130000003060001000
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................2411627.001627000000058100000000000000000000000010000000000100000000000000000000000000000000000631168772000010000001001200000100011401000010000000000000000000732451602000000000000000001000000001100000100000020000000000008010200000000000100040314412810105000055450000100000000000200000000000100022001504001000101755235001001000100020100130200000002049120000000
...............................................................................................AAAAGGAACGATCGTTGTGATATG...................................................................................................................................2411316.001316000020416974000000000000000000000000000000000000000000000000000000000000000000000004651111561757000000000400010040000617000502029000000000000000000000000073000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000027000000000000000000000000000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................2311250.0012500000001819544130000000000000000000000003000000000100000000000000000000000000000000000011348252630000000000000000000018600010101200100000000000000000000011768012000000000000000000000000000000000000000000001000000000000000000000000000000000030600000000191301001000000000000000000000000000030001010000000014204900001101000000023000000010000102210000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................2411108.001108000000041030100000000000000000000002000000000000010000000100000000000000000000000010658159104221000010010041100001018000427080000000000000000000000001248512410000000000000000000000000000000000000000000000000000000000200000000000000120703123500000000141100000000000000002000000000000000000001000000000003071000000000000000000000000000000000000000000
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................2211009.0010090000005361110000000000000000000000001000000000000000000000000000000000000000000000033838821022700000100000000000000870002610100000000000000000000000003442921700000000000000000000000000000000000000000000000000000000000000000000002000021019150000000010900000000001000000000000000000000000000000000000001421500000000000000000000000000000000130000000
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................241768.007680000000000000000000000000000000000400000000000000000000000000000000000000000000001705410000000000010000000000000200000000000000000000000000014567018000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000301600000000000000001000000000000000010000000000010004467300100000000000000000000000000000130100000
...............................................................................................AAAAGGAACGATCGTTGTGATAT....................................................................................................................................231678.00678000000139520000000000000000000000000000000000000000000000000000000000000000000000026651105117130000000100011040000112000203027000000000000000000000000011000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000011000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................231647.0064700000001100000000000000000000000000000000000100000000000000000000000000000000000090861000000000000000000000000020000000000000000000000000003674772461000000000000000000000000000000000000000000000000000000000200000000000000000101020001000013700000000000000001000000000000001000000000000000003263900000000000000000000010001000000130000000
...........................................................................A-TTCATCGGGCCATTCGCTA..........................................................................................................................................................201592.00592000010110000000000000000000000000024000000000000000000000000000000000000000000000031009000010000000000000000100000000000000000000000000000002891138321100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000220000000000000000000000000000000000000000000000000242000000000000000002000000000000000010000000
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................221531.0053100000011071000000000000000000000000020000000000000000010000000000000000000000000000441123161000001000001000100000000040040000000000000000000000001030252200001000000000010000000000000000010000000000000000000000000000000000010010110010010030000111400000000000000000000000000000000000100020100000002404000000000000000100000011000000000100000000
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................191512.00512000000000000000000000000000000000021000000000010000000000000000000000000000000000006000000000000000000100000000000001000000000000000000000000313170050000000000000030000001000000000100000000100000000000000000000000000000000000030110000000261500000000000000000000000000000001010011000200010126810400100000000111010108000000000400120000000
.................................................................................................AAGGAACGATCGTTGTGATAT....................................................................................................................................211401.00401000000186400000000000000000000000020000000000000000000000000000000000000000000000138136468170000000000011020000023000203040000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000102014030000000010000000000000000000000000000000000000000000001000016300000000000000000000000000000000000000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................211354.003540000001313000000000000000000100000300000000000000000000000000000000000000000010004527263250000100000021000000004000231040000000010100000000000001083800000000000000000000000000100011100000001010000000000000000000000000000010040009021110100001013100000000000000010000010000000000000000000100100052800000000000040000100000000000000200000000
.............................................................................TTCATCGGGCCATTCGCTAC.........................................................................................................................................................201345.0034500000000000000000000000000000000003450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AAAGGAACGATCGTTGTG........................................................................................................................................181290.0029000000000000000000000000000000000000000000000100000000000000000000000000000000000010003000000000000000000000000000000000000000000001030000002721280220000000000000000000000000000000100000000000000000000000000000000000000000000000000000000191200000000000000000000000000001000000000000000000001243600000000000211000000000000001000101100000
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................211284.002840000000300000000000000000000000000000000000000000000000000000000000000000000000009131472260000000000000200000004000160013000000000000000000000000011700000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000020000000000000000000000000000000034000000000000000000000000000000000000000000
..............................................................................................TAAAAGGAACGATCGTTGTGATA.....................................................................................................................................231237.00237000000011000000000000000000000000010000000000000000000000000000000000000000000000472081210000000000000000000000000110000000000000000000000000008910800000000000000000000000000000000000000000000000000000000000000000000000000000000030000000064000000000000000000000000000000000000000000000000084300000000000000000000000000000000000000000
.....................................................................................................AACGATCGTTGTGATATG...................................................................................................................................181163.001630000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000131150000000000000000000000000000000000000000000000000000000050200000000000000000000000000000000650000000000000000000000000000000000000001000000000105900000000000000000000000000000000000000000
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................191154.001540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129242300000000000000000000000100000000000000000000000000000000000000000000000000000001030000000032000000000000000010000000000000000000000000000000065100000000000000000000000000000000000000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATC........................................................................................231151.00151000000000000000000000000000000000000000000000000000000000000000000000000000000000200340000000000000000000000000001010000000000000000000000000201100000000000000000000001000000000000000000100000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000104200000000000000000000000000000000000000000
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................211148.0014800000002000000000000000000000000000000000000000000000000000000000000000000000000048226121200000000000000000000020004004000000000000000000001000301020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041000000000000000000000000000000000000000000000000019500000000000000000000000000000000000000000
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................201145.0014500000000110000000000000000000000004700000000030000010000000000000000000000000000004224000000000000000000000000001300010000000000020000000000112000000000000000000000000202000000000100000010000000000000000000000000000000090005040001000055001000005000000120000000010000000000000001010000012700000000000000000000000000000200000000010
....................................................................................................GAACGATCGTTGTGATATG...................................................................................................................................191133.0013300000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000010000000000000000000000000006965000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000105000000000000000000000000000000001000000000000000077700000000000000000000000000000000000000000
..............................................................................................TAAAAGGAACGATCGTTGTGAT......................................................................................................................................221127.00127000000001000000000000000000000000000000000000000000000000000000000000000000000000407200000000000000000000000000210700000000000000000000000010220400000000000000000000000000000000000000010000000000000000000000000000000000100000000000000860000000000000000000000000000000000000000000000000312700000000000000000000000010000001540000000
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................231125.001250000000102000000000000000000000000100000000000000000000000000000000000000000000001772613700000000000000000000000001008000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000005080000000011000000000000000000000000000000000000000000000000025000000000000000000000000000000000000000000
.............................................................................TTCATCGGGCCATTCGCTACTG.......................................................................................................................................................221117.0011700000000000000000000000000000000001170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................221108.00108000000522109000000000000000000000000000000000000000000000000000000000000000000000009143100000000000001010000010000100000000000000000000000000010101000000000000000000000000000000000000000000000000000000000000000001000000000002012001000033000000000000000000000000000000000000000000000000016500000001000000000000010000000100000000000
..........................................................................................................................................ATATCACAGTGATTTTCCTTTATA........................................................................................241107.001070000000010000000000000000000000000000000000000000000000000000000000000000000000003041511200000000000000000000100001001000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000037000000000000000000000000000000000000000000
...............................................................................................................................................ACAGTGATTTTCCTTTAT.........................................................................................181100.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317317400000000000000000000000000000010000000000000000000000000000000000000000000001010300000000470000000000000000000000000000100000000000000000000101000000000000000000000000000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATATGATC................................................................................................................................26194.009400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATC.....................................................................................................................................21176.007600000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000342000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000120000000000000000000000000000000000000000000000000362000000000000000000000000000000000000000000
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................20176.0076000000001000000000000000000000000000000000000000000000000000000000000000000000000210721301000000000000000000020001010000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000112000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000
droEug1
TCAAG-------C-------C--A---A---GTT--A-AGTG-----------TTACCAA-A-------------A-CTACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTCT-TTT----GTTACATATCACAGTGATTTTCCTTTGTAACGCATGTCTAA--TGCCCACTATTCATCAA-GGTTATTAA---------------ACTAA---------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CAAGCCA-TAAAT-------C--A---A---TTT--G-AGTG-----------ATCCCCA-C-------------G-TATCTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----GTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCATGA--AGCCCAAAGCTCATCAA-GGGAAATACCAT--CCGAA-----ATTAC---------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CAAGCCAGTGAAT-------T--A---A---GTT--G-AGTG-----------ATCCCAG-C-------------A-TAACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----GTTACATATCACAGTGATTTTCCTTTATAACGCATGTCTTA--AGCCCCAAAAACATCAA-GGGATATA------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CAAGCCAATACAA-------A--A---A---GTT--G-AGTG-----------AACCCCG-C-------------T-TACTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TCC----TTAACATATCACAGTGATTTTCCTTTATAGCGCATGTCT-G--AGCCCAAAACTCATCGATGGGAAATACAAT--CCAAA-----AACAG---------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAATTCAATAAAA-------C--A---A---GTT--G-AGTG-----------ATCCCTA-C-------------A-TTTTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TCC----GTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT-G--AGCCCAATACTCATCGA-GGGAAATAAGAT--TCGAA-----ATTAT---------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
A----------AT-------A--A---A---GTT--T-AGTG-----------ATTCCTA-A-------------A-GTACACGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TTA----GTTACATATCACAGTGATTTTCCTTTATAACGCATGTCG-T--TGTCCAAAGCTCATCAA-AGGAAAAAACATACTTAAA-----GTTAC---------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TA-TTCAGGATAT-------G--TCCTAA--ACC--A-AGTG-----------ATATCTCAA-------------GCTAACCAGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTT-TCC--CCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTTC-A--AGTCCAAGATTCAACGA-TTG--ATCAGTT--CTAAG-----GTT-----------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CTATTCGAAAAAA-------A--A---T---GTA--A-AATA-----------------------------------TTCTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TCC-CTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGCAG-T--TGTCCAAAATGCATCAA-AAATAACGAGT------TA-----GGTGA---------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................2313433.0034331402558681212013
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................2211891.001891331648199128
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................2211454.00145431114125271013
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................231721.007214059387001
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................211243.00243221720031
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................201154.001542105264116
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................211147.00147512813001
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................221117.0011701170000
...........................................................................................................................................TATCACAGTGATTTTCCTTTAC.........................................................................................221110.0011001100000
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................21164.00640613000
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................23164.006412139003
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................24164.00642556100
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................22154.00546435000
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................20123.0023299003
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................24123.00230194000
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................24119.00190190000
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................24117.00170133010
................................................................................................AAAGGAACGATCGTTGTGAC......................................................................................................................................20116.00160160000
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................22113.00131030000
............................................................................................................................................ATCACAGTGATTTTCCTTTAC.........................................................................................21110.00100100000
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................1919.009072000
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................2318.008071000
................................................................................................AAAGGAACGATCGTTGTGATATGTT.................................................................................................................................2517.007043000
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................2117.007160000
.................................................................................................AAGGAACGATCGTTGTGATAT....................................................................................................................................2117.007430000
.............................................................................TTCTAAGGACCATTCGCTA..........................................................................................................................................................1916.006051000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATT........................................................................................2316.006060000
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................2016.006060000
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................2315.005041000
................................................................................................AAAGGAACGATCGTTGTG........................................................................................................................................1815.005031001
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................2115.005230000
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................1914.004031000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATC........................................................................................2314.004040000
...........................................................................................................................................TATCACAGTGATTTTCCTTTAA.........................................................................................2214.004040000
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................2314.004040000
..............................................................................................................................................CACAGTGATTTTCCTTTAT.........................................................................................1914.004040000
...........................................................................................................................................TATCACAGTGATTTTCCTTC...........................................................................................2013.003030000
...........................................................................................................................................TATCACAGTGATTTTCCTT............................................................................................1913.003012000
..................................................................................................AGGAACGATCGTTGTGATAT....................................................................................................................................2013.003030000
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................2313.003021000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAT.......................................................................................2413.003030000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATG........................................................................................2312.002020000
..............................................................................................................................................CACAGTGATTTTCCTTTATA........................................................................................2012.002020000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAC.......................................................................................2412.002020000
................................................................................................AAAGGAACGATCGTTGTGATATGTTA................................................................................................................................2612.002002000
............................................................................................................................................ATCACAGTGATTTTCCTTTA..........................................................................................2012.002011000
................................................................................................AAAGGAACGATCGTTGTGATATTA..................................................................................................................................2412.002002000
................................................................................................AAAGGAACGATCGTTGTGATAG....................................................................................................................................2212.002002000
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................2212.002020000
.....................................................................................................AACGATCGTTGTGATATG...................................................................................................................................1812.002002000
................................................................................................AAAGGAACGATCGTTGTGATATGAT.................................................................................................................................2512.002000002
..............................................................................................TAAAAGGAACGATCGTTGTGAT......................................................................................................................................2212.002011000
............................................................................................................................................ATCACAGTGATTTTCCTTT...........................................................................................1912.002110000
.............................................................................................................................................TCACAGTGATTTTCCTTTATAA.......................................................................................2212.002020000
...........................................................................................................................................TATCACAGTGATTTTCCTTTGC.........................................................................................2211.001010000
................................................................................................AAAGGAACGATCGTTGTGATT.....................................................................................................................................2111.001000100
............................................................................................................................................ATCACAGTGATTTTCCTTTATATT......................................................................................2411.001010000
........................................TA-----------------------------------TTCTAAGGACCATTCGCTA..........................................................................................................................................................2111.001010000
............................................................................................................................................ATCACAGTGATTTTCCTTTATT........................................................................................2211.001010000
...........................................................................................................................................TATCACAGTGATTTTCCTTTC..........................................................................................2111.001001000
droBip1
AAATTTAAAAAAT-------T--A---AATAAAA--A-AGTG-----------AA------A-------------TATCCTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TCC-CTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGTCA-T--TGTCCAAAATTCATCAG-AGAT-----------C-GAGTT-AG-TGACTTGA---------A-----GGAGTCGSizeHit CountTotal NormTotal
No Reads
dp5
CCCACCCTCACAT-------C--C---A---TCC--C-AGTGTCATTGATTAGTTCCC-A-A-------------CTTCCTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TTC-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT-G--CGCCCACAGCCACACAT-GGGAAACGAAACGCTCAGC--G--GTGGA---------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................23120861.00208612264210780287312423808
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................22111323.0011323041978584304100010
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................23110758.0010758041884614187200030
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................2217060.00706017084499201796050238
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................2111461.0014610928840454000292
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................221783.00783055589113800000
...........................................................................................................................................TATCACAGTGATTTTCCTTTAC.........................................................................................221780.00780007770300000
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................211762.00762041524019600001
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................221640.00640016342300000
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................201598.005982262740265170149
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................241570.0057008938319500020
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................221268.002680236250300040
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................241260.0026001615808500010
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................231224.0022411012318800010
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................211202.0020201415313200020
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................241139.001390012201700000
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................241113.001130177002500010
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................231107.00107018001801070
.................................................................................................AAGGAACGATCGTTGTGATAT....................................................................................................................................21182.008207650100000
..............................................................................................TAAAAGGAACGATCGTTGTGAT......................................................................................................................................22178.0078024303300000
................................................................................................AAAGGAACGATCGTTGTGAC......................................................................................................................................20164.006400640000000
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................20160.006002805000000
............................................................................................................................................ATCACAGTGATTTTCCTTTAC.........................................................................................21160.006000590100000
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................21159.0059054101300000
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................19142.0042022101300033
.............................................................................TCCTAGGGGCCATACGCTA..........................................................................................................................................................19140.004004403200000
...............................................................................................................................................ACAGTGATTTTCCTTTAT.........................................................................................18138.003800203600000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAC.......................................................................................24137.003700370000000
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................23136.0036002101500000
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................20135.0035041601500000
.............................................................................................................................................TCACAGTGATTTTCCTTTATAA.......................................................................................22131.0031021701200000
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................21130.003002370000000
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................23129.002902180900000
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................23128.002803170800000
..............................................................................................TAAAAGGAACGATCGTTGTGATA.....................................................................................................................................23126.0026021101300000
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................19126.002600402200000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAT.......................................................................................24124.0024021101100000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATT........................................................................................23121.002100180300000
............................................................................................................................................ATCACAGTGATTTTCCTTTA..........................................................................................20117.001704130000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATC........................................................................................23115.001501101300000
............................................................................TTCCTAGGGGCCATACGCTA..........................................................................................................................................................20115.001500101400000
.................................................................................................AAGGAACGATCGTTGTGATA.....................................................................................................................................20114.001401130000000
................................................................................................AAAGGAACGATCGTTGTGATATGTT.................................................................................................................................25114.00140040800020
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................22112.00120150300030
.................................................................................................AAGGAACGATCGTTGTGATATGT..................................................................................................................................23111.00110920000000
...................................................................................................GGAACGATCGTTGTGATATG...................................................................................................................................20110.00100820000000
..............................................................................................TAAAAGGAACGATCGTTGTGAC......................................................................................................................................22110.001000100000000
................................................................................................AAAGGAACGATCGTTGTGATT.....................................................................................................................................21110.00100160300000
...............................................................................................AAAAGGAACGATCGTTGTGATAT....................................................................................................................................2319.0090450000000
...........................................................................................................................................TATCACAGTGATTTTCCTT............................................................................................1919.0090070200000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAAA......................................................................................2519.0090270000000
.............................................................................................................................................TCACAGTGATTTTCCTTTATAGC......................................................................................2318.0080050300000
...........................................................................................................................................TATCACAGTGATTTTCCT.............................................................................................1818.0080030500000
.....................................................................................................................TGCGTTAA-TTC-ACCGTTACATA.............................................................................................................2217.0070030400000
................................................................................................................................................CAGTGATTTTCCTTTATA........................................................................................1817.0070060100000
..............................................................................................................................................CACAGTGATTTTCCTTTAT.........................................................................................1917.0070300400000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATG........................................................................................2317.0070050200000
................................................................................................AAAGGAACGATCGTTGTG........................................................................................................................................1816.0060110400000
..................................................................................................AGGAACGATCGTTGTGATAT....................................................................................................................................2016.0060420000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTAA.........................................................................................2216.0060040200000
..............................................................................................................................................CACAGTGATTTTCCTTTATA........................................................................................2016.0060050100000
................................................................................................AAAGGAACGATCGTTGTGATG.....................................................................................................................................2115.0050040100000
................................................................................................AAAGGAACGATCGTTGTGATATGTC.................................................................................................................................2515.0050120100010
................................................................................................AAAGGAACGATCGTTGTGATATGG..................................................................................................................................2415.0050140000000
................................................................................................AAAGGAACGATCGTTGTGATATTT..................................................................................................................................2415.0050020300000
droPer2
CCCACCCTCACAT-------C--C---A---TCC--C-AGTGTCATTGATTAGCTCCC-A-A-------------CTTCCTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TTC-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT-G--CGCCCACAGCCACACAT-GGGAAACGAAACACTCAGC-----GATGG--------------A------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................2217491.00749169693540826611
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................2316462.006462464568164528517
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................2116180.0061806099371133
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................2013284.00328431951613222
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................221721.007212247648121
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................241371.00371347418020
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................231353.00353641306000
..............................................................................................TAAAAGGAACGATCGTTGTGAT......................................................................................................................................221164.0016416003010
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................241161.0016115506000
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................191125.0012511608001
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................22170.00706811000
................................................................................................AAAGGAACGATCGTTGTGAC......................................................................................................................................20167.00676700000
................................................................................................AAAGGAACGATCGTTGTGATATGG..................................................................................................................................24163.00636300000
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................23158.005842013012
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................23151.00515001000
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................21146.00463340000
..............................................................................................TAAAAGGAACGATCGTTGTGATA.....................................................................................................................................23142.00423704010
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................24139.00393602010
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................22127.00270522000
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................22127.00272142000
................................................................................................AAAGGAACGATCGTTGTGATG.....................................................................................................................................21124.00242400000
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................22123.00232300000
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................23121.00211505010
................................................................................................AAAGGAACGATCGTTGTGG.......................................................................................................................................19120.00202000000
................................................................................................AAAGGAACGATCGTTGTGATAG....................................................................................................................................22120.00202000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................21116.0016448000
................................................................................................AAAGGAACGATCGTTGTGATATGTT.................................................................................................................................25116.00161501000
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................20115.00150015000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................24111.0011037010
................................................................................................AAAGGAACGATCGTTGTGAG......................................................................................................................................20111.00111100000
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................23110.0010901000
..................................................................................................AGGAACGATCGTTGTGATAT....................................................................................................................................2019.009900000
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................2119.009801000
...............................................................................................................................................ACAGTGATTTTCCTTTAT.........................................................................................1819.009009000
....................................................................................................GAACGATCGTTGTGATAT....................................................................................................................................1819.009900000
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................2018.008026000
..................................................................................................AGGAACGATCGTTGTGAT......................................................................................................................................1818.008800000
...................................................................................................GGAACGATCGTTGTGATATG...................................................................................................................................2018.008800000
.............................................................................TCCTAGGGGCCATACGCTA..........................................................................................................................................................1917.007007000
.................................................................................................AAGGAACGATCGTTGTGATAT....................................................................................................................................2116.006330000
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................1916.006006000
.................................................................................................AAGGAACGATCGTTGTGATA.....................................................................................................................................2016.006600000
...............................................................................................AAAAGGAACGATCGTTGTGATAT....................................................................................................................................2316.006501000
.....................................................................................................AACGATCGTTGTGATATG...................................................................................................................................1815.005410000
..............................................................................................TAAAAGGAACGATCGTTGTGATAA....................................................................................................................................2415.005500000
...............................................................................................AAAAGGAACGATCGTTGTGAT......................................................................................................................................2115.005500000
...................................................................................................GGAACGATCGTTGTGATAT....................................................................................................................................1914.004400000
...............................................................................................AAAAGGAACGATCGTTGTGATA.....................................................................................................................................2214.004301000
................................................................................................AAAGGAACGATCGTTGTGATT.....................................................................................................................................2113.003200001
..................................................................................................AGGAACGATCGTTGTGATA.....................................................................................................................................1913.003300000
..............................................................................................TAAAAGGAACGATCGTTGTGA.......................................................................................................................................2113.003201000
................................................................................................AAAGGAACGATCGTTGTGATATAA..................................................................................................................................2413.003300000
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................2312.002002000
...........................................................................................................................................TATCACAGTGATTTTCCTT............................................................................................1912.002002000
................................................................................................AAAGGAACGATCGTTGTGATATGAAA................................................................................................................................2612.002200000
.................................................................................................AAGGAACGATCGTTGTGATATGG..................................................................................................................................2312.002200000
.............................................................................................................................................TCACAGTGATTTTCCTTTATAT.......................................................................................2212.002002000
...................................................................................................GGAACGATCGTTGTGATA.....................................................................................................................................1812.002200000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAG.......................................................................................2412.002011000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATT........................................................................................2312.002011000
..................................................................................................AGGAACGATCGTTGTGATATC...................................................................................................................................2112.002200000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAT.......................................................................................2412.002011000
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................2112.002002000
................................................................................................AAAGGAACGATCGTTGTGATATGAT.................................................................................................................................2512.002200000
................................................................................................AAAGGAACGATCGTTGTGATACT...................................................................................................................................2312.002200000
.................................................................................................AAGGAACGATCGTTGTGAT......................................................................................................................................1912.002200000
............................................................................................................................................ATCACAGTGATTTTCCTTT...........................................................................................1911.001001000
................................................................................................AAAGGAACGATCGTTGTGATC.....................................................................................................................................2111.001100000
droWil2
GGAC-------ATCAATAGCA--A---A---GTT--C-A----------------------AGTTTCATCGTCGTTTTTTTCTGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAGATTC-ACCGTTATATATCACAGTGATTTTCCTTTATAGCGCATGCATGTTCTGTCCAATA--TATCAA-CAAT-AT-------CCAGC--AAAGT------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................23151810.005181038332351336101
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................22123023.002302356158722698104
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................22111546.0011546019601130842
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................2314116.00411601150399110
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................2112328.00232841100226413
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................2011803.0018038868166536
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................2111381.001381030013465
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................221408.0040801603911
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................231351.003511013490
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................241283.0028301002730
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................241276.002761602690
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................241275.002750502700
.............................................................................TTTTCTGGGCCATTCGCTA..........................................................................................................................................................191181.001810401770
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................201140.001400101390
...........................................................................................................................................TATCACAGTGATTTTCCT.............................................................................................181117.001170001161
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................23182.0082110800
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................22179.00790370420
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................21175.0075020721
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................23162.0062010610
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................19149.0049100480
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................24148.0048000480
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................22147.0047001460
................................................................................................AAAGGAACGATCGTTGTG........................................................................................................................................18146.0046010450
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAT.......................................................................................24144.0044010430
.................................................................................................AAGGAACGATCGTTGTGATAT....................................................................................................................................21131.00310150151
..............................................................................................TAAAAGGAACGATCGTTGTGAT......................................................................................................................................22130.0030000300
...........................................................................................................................................TATCACAGTGATTTTCCTTTATT........................................................................................23127.0027000270
................................................................................................AAAGGAACGATCGTTGTGATATGTT.................................................................................................................................25126.0026000260
...............................................................................................................................................ACAGTGATTTTCCTTTAT.........................................................................................18124.0024000240
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................20122.0022010210
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................21120.0020020180
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAAA......................................................................................25119.0019000190
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................22114.0014000140
...........................................................................................................................................TATCACAGTGATTTTCCTTTAC.........................................................................................22114.0014000140
.............................................................................................................................................TCACAGTGATTTTCCTTTATAA.......................................................................................22113.0013010120
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................23113.0013000130
............................................................................TTTTTCTGGGCCATTCGCTA..........................................................................................................................................................20113.0013000130
................................................................................................AAAGGAACGATCGTTGTGATATGAA.................................................................................................................................25112.0012000120
.............................................................................................................................................TCACAGTGATTTTCCTTTATAT.......................................................................................22112.0012000120
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................23111.0011000110
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................21110.001005050
...........................................................................................................................................TATCACAGTGATTTTCCTTTT..........................................................................................21110.0010000100
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................1919.00900090
............................................................................................................................................ATCACAGTGATTTTCCTTT...........................................................................................1918.00800080
...........................................................................................................................................TATCACAGTGATTTTCCTT............................................................................................1917.00700070
................................................................................................AAAGGAACGATCGTTGTGATATGG..................................................................................................................................2416.00600060
.......................................................................................................................CGTTAGATTC-ACCGTTATA...............................................................................................................1916.00600060
................................................................................................AAAGGAACGATCGTTGTGATG.....................................................................................................................................2116.00600060
.....................................................................................................AACGATCGTTGTGATATG...................................................................................................................................1815.00501040
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAG.......................................................................................2415.00500050
................................................................................................AAAGGAACGATCGTTGTGAC......................................................................................................................................2015.00520021
................................................................................................................................................CAGTGATTTTCCTTTATA........................................................................................1815.00500050
...........................................................................................................................................TATCACAGTGATTTTCCTTTAA.........................................................................................2215.00502030
...........................................................................................................................................TATCACAGTGATTTTCCTTAT..........................................................................................2115.00501040
............................................................................................................................................ATCACAGTGATTTTCCTTTATAT.......................................................................................2314.00400040
............................................................................................................................................ATCACAGTGATTTTCCTTTA..........................................................................................2014.00400040
................................................................................................AAAGGAACGATCGTTGTGATATGTA.................................................................................................................................2514.00400040
................................................................................................AAAGGAACGATCGTTGTGATATGTC.................................................................................................................................2514.00400040
..............................................................................................TAAAAGGAACGATCGTTGTGATA.....................................................................................................................................2313.00300030
................................................................................................AAAGGAACGATCGTTGTT........................................................................................................................................1813.00300030
................................................................................................AAAGGAACGATCGTTGTGT.......................................................................................................................................1913.00300030
...........................................................................TTTTTTCTGGGCCATTCGCTA..........................................................................................................................................................2113.00300030
...........................................................................................................................................TATCACAGTGATTTTCCTTTATG........................................................................................2313.00300030
................................................................................................AAAGGAACGATCGTTGTGATTG....................................................................................................................................2213.00300030
................................................................................................AAAGGAACGATCGTTGTGATC.....................................................................................................................................2113.00310020
...................................................................................................GGAACGATCGTTGTGATATG...................................................................................................................................2012.00211000
................................................................................................AAAGGAACGATCGTTGTGATATAA..................................................................................................................................2412.00200020
droVir3
TCTGACCATATAT-------A--T---A---TCTGAT-ATTCTCGTATACTATA-------T-------------A-TAAATTGGGTCATGCTCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TTA-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCA------GCCCGTAAAGCAACAC-CACATACGA---------T-----CTA-------TATCCATGTCTATATA----GASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................23166177.006617729701213801360121122029101040251241043292641675411536188215704310102704298290939452967244945032170358719711171144510649120298932204764024104312426155914761861585499280327
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................22111567.0011567325653522350012011143104024643023141196041071963021921134131971283362382664222975734023183462591101269500211101010312332432512529816216389128
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................2116493.00649323341737010000000400001000100110001061122017220016374252943973263004942765173462302811922109077120000302413273242313141343953
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................2014656.0046561135214900030620011000001000000010010002220152129282498819116320833136820730624417132183466130001615190011121748396671
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................2312561.00256100592200000000070000000020010011118401122474072520000224820262030162912121160002220900001532000000015111231
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................2212463.00246302910290000000001732551141140103115442781871478800001148172013292145241726170001212341000151013340000003553421011
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................2411002.0010021102540000000001000000000000000000004111450020019123335376144805134383600012218000004911000220141118810
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................231460.00460000113000000000100000000000000000000137200000810101711310237686000121660000041400000043200
..............................................................................................TAAAAGGAACGATCGTTGTGAT......................................................................................................................................221295.00295000100000000000000000000000000000000000000006216710251432281525220007630000000000000001102
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................221282.00282000279000000000000000000000000000000010000000000000000000000020000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................241257.00257200590000000000000000001000000000201361000005110106183141248800024600000541300000075946
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................211173.001730018600000000011000000000000000001062479000001001102124100004120000000100000041110
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................241164.001640001700000000000000100100000000001101725291600000301111220111000370000020500000007513
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................221129.00129000460000000010000000000000010000305111719000002000110100000000140000000500000020000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATC........................................................................................231129.00129000730000000000000000000000000100000000000002000033732430002530000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................231127.0012701032010000001000000000000000000000112200000516455311412200019160100000100000000000
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................211105.001050001200000000000000000000000000000000140001414106246173140000230000000800000062211
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................21197.0097000360000000000000000001000000000102132000006550320344110002150000000000000000000
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................19178.007802070000000000000000000000001000001100000104662152335431001340000010200000000000
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................23177.0077020130000000000000000000000000000201252000002252411112211000730200001300000000000
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................24175.007500057000000000100000000000000000000100300000001000002110000170000000000000000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTAC.........................................................................................22157.005700056000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................AAAAGGAACGATCGTTGTGATATG...................................................................................................................................24145.004500000000000000000000000000000000000000000003508113152203000200000000000000000000
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................22140.004000015000000000100000000000000000000233200000002102200200000110000001100000001000
................................................................................................AAAGGAACGATCGTTGTGAC......................................................................................................................................20138.003812027000000000000000000000000000000000000000000001102001010200000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATATGTT.................................................................................................................................25134.00340003000000000000000000000000000000002000000012233321130000420000000000000011000
..............................................................................................TAAAAGGAACGATCGTTGTGATA.....................................................................................................................................23131.00310002000000000000000000000000000000010000000202210130210000110000000800000021100
................................................................................................AAAGGAACGATCGTTGTGATATGTC.................................................................................................................................25128.00280005000000000000000000000000000001000000000101002223110000360000000000000000000
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................20125.002500011000000000000000001100010000000102300000000000000000000050000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATC.....................................................................................................................................21122.00220104000000000000000000000000000000000000000100220202001000520000000000000000000
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................21117.00170005000000000000000000000000000020021000000000000000110000000000000300000020000
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................20116.00160016000000000000000000000000010010001100000000000000000000010000001000000001110
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAT.......................................................................................24116.00160001000000000000000000000000000010042300000001001010000000010000000000000000100
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAC.......................................................................................24113.00130006000000000000000000000000000000000000000000000111000000400000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATATGAT.................................................................................................................................25113.00130000000000000000000000000000000000000000000001001121210000200000000000000100100
................................................................................................AAAGGAACGATCGTTGTGATATGTCC................................................................................................................................26112.00120000000000000000000000000000000000000000000000200002011000600000000000000000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAAA......................................................................................25112.00120003000000000000000000000000000000121100000000000000001000000000001000000002000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATCC.......................................................................................24112.00120016000000000000000000000000000000000000000000000001100000300000000000000000000
................................................................................................AAAGGAACGATCGTTGTGG.......................................................................................................................................19111.00110100000000000000000000000000000000000000000101100002010000400000000000000000000
............................................................................................................................................ATCACAGTGATTTTCCTTTAC.........................................................................................21111.00110009000000000000000000000000000000101000000000000000000000000000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................23110.00100003000000000000000000000000000000000000000011001110000000000000000000000000101
................................................................................................AAAGGAACGATCGTTG..........................................................................................................................................16110.00100000000000000000000000000000000000000000000012011000011000300000000000000000000
..................................................................................................AGGAACGATCGTTGTGATA.....................................................................................................................................19110.00100000000000000000000000000000000000000000000110100000103000010000010000000010000
...........................................................................................................................................TATCACAGTGATTTTCCTT............................................................................................19110.00100000000000000000000000000000000000013100000001000201100000000000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................2219.0090001000000000000000000000000000000000000000000100001000000310000000000000011000
.............................................................................TAAATTGGGTCATGCTCTA..........................................................................................................................................................1919.0090000000000000000000000000000000000000000001120001000000000000000000100000020010
................................................................................................AAAGGAACGATCGTTGTGATT.....................................................................................................................................2118.0080001000000000000000000000000000000000000000001010010000000310000000000000000000
...............................................................................................AAAAGGAACGATCGTTGTGAT......................................................................................................................................2118.0080000000000000000000000000000000000000000000000001041100000100000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATATGAA.................................................................................................................................2518.0080000000000000000000000000000000000001000000000001010000000020000000000000011100
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................1918.0080002000000000000000000000000000000003100000000000000000000020000000000000000000
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................2318.0080000000000000100000000000000000000002200000010100000000000000000000000000001000
................................................................................................AAAGGAACGATCGTTGTG........................................................................................................................................1818.0080003010000000000000000000000000000000100000000000000000000020000000100000000000
..................................................................................................AGGAACGATCGTTGTGAT......................................................................................................................................1817.0070000000000000000000000000000000000100000001011001000000000000000000000000000101
...............................................................................................AAAAGGAACGATCGTTGTGATA.....................................................................................................................................2217.0070000000000000000000000000000000000000000000001001112100000000000000000000000000
.............................................................................................................................................TCACAGTGATTTTCCTTTATAA.......................................................................................2217.0070003000000000000000000000000000000000000000000000000000000010000000100000011000
................................................................................................AAAGGAACGATCGTTGTGATATGG..................................................................................................................................2417.0070004000000000000000000000000000000000000000000000000011000100000000000000000000
.......................................................................................................................CGTTCA-TTA-ACCGTTACA...............................................................................................................1816.0060000000000000000000000000000000010111000000000000000000000020000000000000000000
...............................................................................................AAAAGGAACGATCGTTGTGATAT....................................................................................................................................2316.0060000000000000000000000000000000000000000000001201010001000000000000000000000000
...........................................................................................................................................TATCACAGTGATTTTCCTTTATT........................................................................................2316.0060004000000000000000000000000000000000000000001000000000000100000000000000000000
............................................................................................................................................ATCACAGTGATTTTCCTTTATC........................................................................................2216.0060006000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................ACAGTGATTTTCCTTTAT.........................................................................................1816.0060000000000000100000000000000000000110000000000001000000000110000000000000000000
....................................................................................................GAACGATCGTTGTGATATG...................................................................................................................................1915.0050000000000000000000000000000000000001000000000000000000000100000000000000011010
................................................................................................AAAGGAACGATCGTTGTGATATTT..................................................................................................................................2415.0050002000000000000000000000000000000000000000000000000000000120000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATG.....................................................................................................................................2115.0050002000000000000000000000000000000000000000000001001000000000000000000000010000
..................................................................................................AGGAACGATCGTTGTGATATGT..................................................................................................................................2215.0050003000000000000000000000000000000000000000000010010000000000000000000000000000
............................................................................................................................................ATCACAGTGATTTTCCTTTA..........................................................................................2015.0050000000000000000000000000000000000010100000010001000010000000000000000000000000
...................................................................................................GGAACGATCGTTGTGATATG...................................................................................................................................2014.0040001000000000000000000000000000000000000000110000000000000000000000000000010000
..............................................................................................................................................CACAGTGATTTTCCTTTATA........................................................................................2014.0040002000000000000000000000000000000011000000000000000000000000000000000000000000
................................................................................................AAAGGAACGATCGTTGTGATATGTTC................................................................................................................................2614.0040002000000000000000000000000000000000000000000000000000000200000000000000000000
droMoj3
TATATATATACAT-------C--T---A---TGA--AAAGTTTTTATGA-AAGTTCA----AAATGCAAACTCG---ATGAATGGGCCATGCGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TCG-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCA------GTCCCCCAGACTACAA-T----ATGAATG--TGAAT-----ATT-------TATAAGTGTATATATA----TTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................231103385.00103385208896689444411
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................22163878.006387823480521590461
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................22162994.006299462770316020410
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................23157007.00570076209100549100
................................................................................................AAAGGAACGATCGTTGTGATA.....................................................................................................................................2117688.00768803760173110
............................................................................................................................................ATCACAGTGATTTTCCTTTAT.........................................................................................2115487.00548712900051960
............................................................................................................................................ATCACAGTGATTTTCCTTTATA........................................................................................2214838.00483801060047320
................................................................................................AAAGGAACGATCGTTGTGATAC....................................................................................................................................2214143.004143030041400
...........................................................................................................................................TATCACAGTGATTTTCCTTTAC.........................................................................................2213555.0035550100035450
...........................................................................................................................................TATCACAGTGATTTTCCTTTATC........................................................................................2311942.0019422240019160
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................2411743.0017430810016620
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................2011261.00126122270210228
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................2111095.0010951300010640
................................................................................................AAAGGAACGATCGTTGTGATATT...................................................................................................................................2311093.0010930811010110
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAA.......................................................................................2411051.0010511108009420
................................................................................................AAAGGAACGATCGTTGTGATATGC..................................................................................................................................241829.00829097007284
................................................................................................AAAGGAACGATCGTTGTGATATGA..................................................................................................................................241578.00578038105390
................................................................................................AAAGGAACGATCGTTGTGATATC...................................................................................................................................231468.00468029004390
............................................................................................................................................ATCACAGTGATTTTCCTTTAC.........................................................................................211292.0029200002920
.............................................................................................................................................TCACAGTGATTTTCCTTTATA........................................................................................211260.00260011002490
.................................................................................................AAGGAACGATCGTTGTGATATG...................................................................................................................................221256.0025614002510
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAT.......................................................................................241188.00188027001610
...........................................................................................................................................TATCACAGTGATTTTCCTTTATT........................................................................................231177.0017705001720
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAC.......................................................................................241173.0017301001720
.............................................................................................................................................TCACAGTGATTTTCCTTTAT.........................................................................................201173.00173016001570
............................................................................................................................................ATCACAGTGATTTTCCTTTATC........................................................................................221160.0016010001590
.................................................................................................AAGGAACGATCGTTGTGATAT....................................................................................................................................211142.0014200001420
...............................................................................................................................................ACAGTGATTTTCCTTTAT.........................................................................................181132.0013205700750
................................................................................................AAAGGAACGATCGTTGTGATATA...................................................................................................................................231130.00130013001170
................................................................................................AAAGGAACGATCGTTGTGAC......................................................................................................................................201130.0013000001300
................................................................................................AAAGGAACGATCGTTGTGATATGTC.................................................................................................................................251113.0011313200800
............................................................................................................................................ATCACAGTGATTTTCCTTTATAA.......................................................................................231110.0011005001050
..............................................................................................................................................CACAGTGATTTTCCTTTAT.........................................................................................191108.0010801001070
..............................................................................................................................................CACAGTGATTTTCCTTTATA........................................................................................201103.0010300001030
...........................................................................................................................................TATCACAGTGATTTTCCTTT...........................................................................................201101.0010134000580
...............................................................................................................................................ACAGTGATTTTCCTTTATA........................................................................................19195.009502700680
................................................................................................AAAGGAACGATCGTTGTGA.......................................................................................................................................19181.00810210780
................................................................................................................................................CAGTGATTTTCCTTTATA........................................................................................18179.00790000790
............................................................................................................................................ATCACAGTGATTTTCCTTTA..........................................................................................20179.00790300760
...........................................................................................................................................TATCACAGTGATTTTCCTTTATG........................................................................................23153.00530100520
.............................................................................................................................................TCACAGTGATTTTCCTTTATAA.......................................................................................22152.00520300490
................................................................................................AAAGGAACGATCGTTGTGATATGTT.................................................................................................................................25147.004702600210
...........................................................................................................................................TATCACAGTGATTTTCCTTTATAAA......................................................................................25145.00450300420
................................................................................................AAAGGAACGATCGTTGTGATAA....................................................................................................................................22140.00400100390
...........................................................................................................................................TATCACAGTGATTTTCCTTTATCC.......................................................................................24136.00360000360
..................................................................................................AGGAACGATCGTTGTGATATG...................................................................................................................................21133.00331000320
............................................................................................................................................ATCACAGTGATTTTCCTTTATT........................................................................................22130.00300000300
............................................................................................................................................ATCACAGTGATTTTCCTTTATAC.......................................................................................23129.00290000290
............................................................................................................................................ATCACAGTGATTTTCCTTTATAT.......................................................................................23128.00280300250
...........................................................................................................................................TATCACAGTGATTTTCCTTTAA.........................................................................................22128.00280000280
................................................................................................AAAGGAACGATCGTTGTGATACC...................................................................................................................................23127.00270100260
................................................................................................AAAGGAACGATCGTTGTGATATGG..................................................................................................................................24125.00250100240
...........................................................................................................................................TATCACAGTGATTTTCCTT............................................................................................19124.00240100230
.................................................................................................AAGGAACGATCGTTGTGATA.....................................................................................................................................20121.00210000210
................................................................................................AAAGGAACGATCGTTGTGATT.....................................................................................................................................21121.00211100190
.............................................................................ATGAATGGGCCATGCGCTA..........................................................................................................................................................19121.00210500160
droGri2
TAGTGTA-TATAA-------TATTCCTGA--TAT--A-TGTG-----------TT----AAA-------------GTCGTTATGGGTCACTCGCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TTAAATCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCTC----TGCCCAAAACTCAACTA------------A--CCAGT-----GTTGA--------------A------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
................................................................................................AAAGGAACGATCGTTGTGATATG...................................................................................................................................2325.001055
...........................................................................................................................................TATCACAGTGATTTTCCTTTAT.........................................................................................2222.00440
................................................................................................AAAGGAACGATCGTTGTGATAT....................................................................................................................................2221.50321
...........................................................................................................................................TATCACAGTGATTTTCCTTTA..........................................................................................2121.50330
................................................................................................AAAGGAACGATCGTTGTGAT......................................................................................................................................2020.50101
................................................................................................AAAGGAACGATCGTTGTGATT.....................................................................................................................................2120.50101
................................................................................................AAAGGAACGATCGTTGTGATATGT..................................................................................................................................2420.50101
...........................................................................................................................................TATCACAGTGATTTTCCTTTATA........................................................................................2320.50110

Generated: 10/20/2015 at 07:33 PM