ID:

dya-mir-309

 Coordinate:

2R:13623507-13623575 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.9 -14.7 -14.3

Flybase annnotation

pre_miRNA [Dyak\mir-309-RM]; utr3 [utr3_minus_3620]; miRNA [Dyak\miR-309-RA]; pre_miRNA [Dyak\mir-3-RM]; utr3 [utr3_minus_3619]

No Repeatable elements found

Sense Strand Reads

GATGATCCAGCAGTGAAAACAAAAGTATCAAAGCAAAGTTTGGAACAGCAATTATACGACAAACCTTGTTCTGTTTTGCCAATTTCCTAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACCAGCAGCCAAGTGTGAACCATCAAAGGTCCTGATCC

*****************************************.........((((((.(((((((.(((.................(((((......)))))))).))))))).))))))...........*************************************** 		Read size # Mismatch Hit Count Total Norm Total M056

embryo

 V046

embryo

 M043

female body

 GSM1528802

follicle cells		 V058

head

 V052

head

 V120

male body
.............................................................................................GCACTGGGTAAAGTTTGTCCTA...................................................... 22 0 1 1191.00 1191 769 418 3 0 1 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCT....................................................... 21 0 1 1020.00 1020 836 180 2 0 2 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCC....................................................... 21 1 1 228.00 228 227 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCC........................................................ 20 0 1 94.00 94 87 7 0 0 0 0 0
.............................................................................................GGACTGGGTAAAGTTTGTCCT....................................................... 21 1 1 69.00 69 68 1 0 0 0 0 0
.............................................................................................GGACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 37.00 37 36 1 0 0 0 0 0
........................................................CGACAAACCTTGTTCTGTTTTG........................................................................................... 22 0 1 28.00 28 28 0 0 0 0 0 0
.............................................................................................GCATTGGGTAAAGTTTGTCCT....................................................... 21 1 1 20.00 20 20 0 0 0 0 0 0
.............................................................................................GCATTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 20.00 20 20 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGTTTGTCCTA...................................................... 22 1 1 12.00 12 10 2 0 0 0 0 0
.............................................................................................GGACTGGGTAAAGTTTGTCCC....................................................... 21 2 1 11.00 11 11 0 0 0 0 0 0
.............................................................................................GTACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 10.00 10 10 0 0 0 0 0 0
.............................................................................................GCACTGGGTACAGTTTGTCCTA...................................................... 22 1 1 10.00 10 8 2 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTAA..................................................... 23 1 1 8.00 8 3 5 0 0 0 0 0
.............................................................................................GCCCTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 7.00 7 5 2 0 0 0 0 0
.............................................................................................GCATTGGGTAAAGTTTGTCCC....................................................... 21 2 1 7.00 7 7 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGTTTGTCCT....................................................... 21 1 1 7.00 7 7 0 0 0 0 0 0
.............................................................................................TCACTGGGTAAAGTTTGTCCT....................................................... 21 1 1 7.00 7 7 0 0 0 0 0 0
..............................................................................................CACTGGGTAAAGTTTGTCCTA...................................................... 21 0 1 6.00 6 4 0 2 0 0 0 0
........................................................CGACAAACCTTGTTCTGTTTTGCC......................................................................................... 24 0 1 6.00 6 6 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCTGTTTT............................................................................................ 21 0 1 5.00 5 4 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTC......................................................... 19 0 1 5.00 5 2 3 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGTTTGTCCTA...................................................... 22 1 1 5.00 5 2 3 0 0 0 0 0
........................................................CTACAAACCTTGTTCTGTTTTG........................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0
.................................CAAAGGTTGGAAGAGCACTT.................................................................................................................... 20 3 6 4.50 27 0 0 0 27 0 0 0
.............................................................................................GCACTGGGTACAGTTTGTCCT....................................................... 21 1 1 4.00 4 3 1 0 0 0 0 0
.............................................................................................GCACTGTGTAAAGTTTGTCCT....................................................... 21 1 1 4.00 4 3 1 0 0 0 0 0
............................................................................................CGCACTGGGTAAAGTTTGTCCTA...................................................... 23 1 1 4.00 4 3 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTC...................................................... 22 1 1 4.00 4 3 1 0 0 0 0 0
...........................................................................................TCGCACTGGGTAAAGTTTGTCCTA...................................................... 24 2 1 4.00 4 4 0 0 0 0 0 0
.............................................................................................GCACTTGGTAAAGTTTGTCCT....................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTTTCCTA...................................................... 22 1 1 4.00 4 3 1 0 0 0 0 0
.............................................................................................GTACTGGGTAAAGTTTGTCCT....................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
............................................................................................AGCACTGGGTAAAGTTTGTCCT....................................................... 22 0 1 4.00 4 3 1 0 0 0 0 0
.............................................................................................GCACTGTGTAAAGTTTGTCCTA...................................................... 22 1 1 4.00 4 3 1 0 0 0 0 0
............................................................................................CGCACTGGGTAAAGTTTGTCCT....................................................... 22 1 1 3.00 3 2 1 0 0 0 0 0
.............................................................................................TCACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0
....................................................TATACGACAAACCTTGTTCTGT............................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGTTTGTCCC....................................................... 21 2 1 3.00 3 3 0 0 0 0 0 0
.............................................................................................TCACTGGGTAAAGTTTGTCCC....................................................... 21 2 1 3.00 3 3 0 0 0 0 0 0
............................................................................................CTCACTGGGTAAAGTTTGTCCT....................................................... 22 2 1 3.00 3 3 0 0 0 0 0 0
...............................................................................................ACTGGGTAAAGTTTGTCCTA...................................................... 20 0 1 3.00 3 2 1 0 0 0 0 0
.............................................................................................GCACTGGGTAACGTTTGTCCTA...................................................... 22 1 1 3.00 3 0 3 0 0 0 0 0
.............................................................................................GCACTGGGTAGAGTTTGTCCTA...................................................... 22 1 1 3.00 3 0 3 0 0 0 0 0
.....................................................ATACGACAAACCTTGTTCTGTT.............................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTCTCCTA...................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTACTA...................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0
...........................................................................................TCGCACTGGGTAAAGTTTGTCCC....................................................... 23 3 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACTGAGTAAAGTTTGTCCTA...................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0
.............................................................................................GCCCTGGGTAAAGTTTGTCCT....................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCTTA...................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0
...............................................................................................ACTGGGTAAAGTTTGTCCT....................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACCGGGTAAAGTTTGTCCT....................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGGTTGTCCC....................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................TCACTGGGTGAAGTTTGTCGTA...................................................... 22 3 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACTGGCTAAAGTTTGTCCTA...................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGGCCT....................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCTGTTT............................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGTTTGTCC........................................................ 20 1 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGATTGTCCTA...................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGGTTGTCCT....................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAGGTTTGTCCTA...................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0
.......................................................ACGACAAACCTTGTTCTGTTTTGCC......................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACTGAGTAAAGTTTGTCCT....................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTTCT....................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GGACTGGGTAAAGTTTGTCC........................................................ 20 1 1 2.00 2 2 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCTGT............................................................................................... 18 0 1 2.00 2 1 1 0 0 0 0 0
..............................................................................................CACTGGGTAAAGTTTGTCCT....................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0
...............................................................................................ACTGGGTAAAGTTTGTCCC....................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTAGTCCT....................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTT...................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCAA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................ATACGACAAACCTTGTTCTGTC.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
........................................................CTACAAACCTTGTTATGTTTTGCC......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
........................................................CTACAAACCTTGTTCTGTTTT............................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
......................................................TACGACAAACCTTGTTCTGTTTT............................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCG....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCATTGGGTAAAGTTTTTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................TGACTGGGTAAAGTTTGTCCT....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTAC..................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................CAATGGGTAAAGTTTGTCCT....................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTAGGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
........................................................CCACAAACCTTGTTCTGTTTTG........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGCCAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GTACTGGTTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCGCTGGGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCCCTGGGTAACGTTTGTCCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGGAATGTTTGTCCT....................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................ACACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCTGTTTTCCC......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCCTTGGGTAAAGTTTGTCC........................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GAACTGGGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................ACGTCAAACCTTGTTCTGTTTT............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................GTAAAGTTTGTCCTATAATCC................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GGACTGGGTAAAGTTTGTCCTAT..................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................AGAACTGGGTAAAGTTTGTCCT....................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................CCACTGGGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................ACTGGGGAAAGTTTGTCC........................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGTTTTTTCTA...................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTCC..................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTCGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTGAAGTTTGTCTTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTCTGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTCTCCC....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
........................................................CGATAAACCTTGTTCTGTTTTG........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCAATGGGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
........................................................CTACAAACCTTGTTCTGTTTTGCCA........................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTACAGTTTGTCCC....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTAT..................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1
.............................................................................................GCACTGGGTTAAGTTTGTCCGA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
........................................................CGATAAACCTTGTTCTGTTTTGCC......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTTCC....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................ATCGCACTGGGTAAAGTTTGTCCT....................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTTT..................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................TGCACTGGGTAAAGTTTGTCCTA...................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................TCACTGGGTAAAGTTTGTCC........................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................TCACTGGGTAAAGTTTCTCCT....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................ACACTGGGTAAAGTTTGTTCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................CCACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GAACTGAGTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAATTTTGTCCTA...................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCGCTGGGTAAAGTTTGCCCT....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................TAATCCCGAAACGACGACCAGCAGC............................. 25 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCCCTGGGGAAACTTTGTCCTA...................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0
........................................................TGACAAACCTTGTTCTGTTTTG........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTACAGTTTGTCA........................................................ 20 2 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTTC........................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTG...................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0
......................................................TACGACAAACCTTGTTCTGTTTTGC.......................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................GATCGCACTGGGTAAAGTTTGTCCTA...................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCGA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................AACCATCAAAGGTCCTGATCC 21 0 1 1.00 1 1 0 0 0 0 0 0
........................................................CTACAAACCTTTTTCTGTTTTGCC......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GGACTGGGTAAAGTTTTTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGTTTGTCCC....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTTAAGTTTGTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................TAGCCAGCACTGGGTAAAGTTTGTCCTA...................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTGAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
........................................................CTACAAACCTTGTTCTGTTTTGCC......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTAGGTAAAGTTTGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................AGACGACAAACCTTGTTCTGTT.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................TATACGACAAACCTTGTTCTGC............................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGCTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
........................................................CTACAAACCTTGTTCTGTTT............................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTGGTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................ACACTTGGTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GTACTGGGTAAAGTTTGTCCC....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCATTGGGTAAAGTTTGTCCTC...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
........................................................TTACAAACCTTGTTCTGTTTTG........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGGTTGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTACCGTTTGTCCTT...................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0
........................................................CGACAAACCTTGTTCTGTTTTGT.......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................CACCGGGTAAAGTTTGTCCTA...................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................TCAATTGGTAAAGTTTGTCCTA...................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GAACTGGGTCAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
..........................................................AGAAACCTTGTTCTGTTTTGC.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCTCTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCATTGGGCAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................CAGCACTGGGTAAAGTTTGTCCC....................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCGCTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGCTAAAGTTTGTCCC....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
................................................................................................CTGGGTAAAGTTTGTCCTA...................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCTGTTTTGC.......................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...................................................TGATACGACAAACCTTGTTCTGT............................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGATAAAGTTTGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................CACTGGGTAAAGTTTGTCCC....................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTCTGTCCT....................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
........................................................CGACAAACCTTGTTCTGCTTTG........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GGACTGGGGAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCACTGTGTAAAGTTGGTCCT....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GTACTGGGTAAAGTTTGTCC........................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGCTTGTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTTGGTAAAGTTTGTCCC....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTGCTA...................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................TGGGTAAAGTTTGTCCTA...................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTTTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTAGGTAAAGTTTGTCACA...................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GGACTGTGTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................TCACTGGGTGAAGTTTGTCTTA...................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAACTTTGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACGGGGTTAAGTTTGTCCT....................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
......................................................TACGACAAATCTTGTTCTGTTTTGCC......................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTATAGTGTGTCCTT...................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTTTCCTC...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAGGTTTGTCCT....................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0
.............................................................................................GCACTGGGTAAAGATTGTCCT....................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GGACTTGGTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTTAAGCTTGTCCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGTTAAGTTTGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGCGTATAGTTTGTCCT....................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................ACCGGGTAAAGTTTGTCCTA...................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTACAGTTTGTCC........................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTCAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGGTCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................CATCAAAGGTCCTGATCC 18 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GGACTGGGCAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GGACTGTGTAAAGTTTGTCCC....................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0
..........................................................................ATTGCCAATATCCTAGCCGGC.......................................................................... 21 3 3 0.67 2 0 0 2 0 0 0 0
.............................................................................................GCACTAAGTAATGTTTGTCCTA...................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0
..............................................................................................CAGTGGGTAAAGTTTGTCCC....................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGCACAGTTTGTCCT....................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGCTCGCCCT....................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTTGCC........................................................ 20 2 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTGAAGTTTGTCTT....................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGGAACAGTTTGTTCTA...................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGTGTGTCC........................................................ 20 2 5 0.40 2 2 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCTGC............................................................................................... 18 1 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................GCATTGGGTGAAGTTTGTCTTA...................................................... 22 3 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................TCACTGGGTGAAGTTTGTCG........................................................ 20 3 4 0.25 1 1 0 0 0 0 0 0
.............................................................................................GCACTGGTGAAAGTTTGTCCC....................................................... 21 3 6 0.17 1 0 0 0 0 1 0 0
.............................................................................................GCACTGGGTATAGTTTGTTAT....................................................... 21 3 6 0.17 1 0 1 0 0 0 0 0
.............................................................................................GCACTGGGAAAAGATTGTC......................................................... 19 2 10 0.10 1 0 1 0 0 0 0 0

Anti-sense strand reads

CTACTAGGTCGTCACTTTTGTTTTCATAGTTTCGTTTCAAACCTTGTCGTTAATATGCTGTTTGGAACAAGACAAAACGGTTAAAGGATCGGTCGTGACCCATTTCAAACAGGATATTAGGGCTTTGCTGCTGGTCGTCGGTTCACACTTGGTAGTTTCCAGGACTAGG

***************************************.........((((((.(((((((.(((.................(((((......)))))))).))))))).))))))...........***************************************** 		Read size # Mismatch Hit Count Total Norm Total M043

female body

 V120

male body		 M056

embryo
......................................................................................................................AGGGTTCTGCTGCTGGTCGTC.............................. 21 2 1 1.00 1 1 0 0
.....................................................................................................................CAGGGTTCTGCTGCTGGTCGTC.............................. 22 3 1 1.00 1 1 0 0
........................................................................................................................GGATTTGCTGCAGGTCGTC.............................. 19 2 3 0.33 1 0 1 0
.........................................CCTTCTCGTTAACAGGCTGT............................................................................................................ 20 3 5 0.20 1 0 0 1
.....................................................................................................................CAGGGTTCTGCTGCTGGTCG................................ 20 3 7 0.14 1 1 0 0
..........................................................................................................................TTTTGCTGTTGGTCGTCG............................. 18 2 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droYak3 2R:13623457-13623625 + dya-mir-309 Known_mirbase GATGATCCAGCAGTGAAA-----------ACAAA---------------------A----GTATCAAAGC--------------AA--AGTTTG---GAACA-GCAATTATACGACAAACCTTGTTCTGTTTTGCC----------------AATTTCCT-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-AC--GACGACCAGC---A--G----C-------------------------CAAGTGTGAACC------------ATC-AA--------AGGTCCTGATCC
droEre2 scaffold_4845:9749408-9749568 - der-mir-309 Known_mirbase GAGGATCCCGCAGTGAAA-----------AGTAA---------------------A----GTA----------TAC-----------GAGTTTG---GAACA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-AC--GACGACCAGC---C--A--------------------------------ATTGTGAACC------------CAC-CA--------AGGTCCTGATCC
droSec2 scaffold_1:13063891-13064051 - dse-mir-309 Known_mirbase GAGCATCCAGCAGTGAAA-----------AGCAA---------------------T----GTC-------------------TTAA--AGTTTG---GAACA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-AC--GACGACCAGC---T--A--------------------------------ATTGTGAATC------------ACC-AA--------AGGTCCCGATCC
droSim2 2r:16196434-16196593 - dsi-mir-309 Known_mirbase GAGGATCTAGTAGTGCAA-----------AGC-A---------------------A----GTC-------------------TTAA--AGTTTG---GAACA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-AC--GACGACCAGC---T--A--------------------------------ATTGTGAACC------------ACC-AA--------AGGTCCCGATCC
dm3 chr2R:15549164-15549324 - dme-mir-309 Known_mirbase AAGGATCCCGCAGTGAGA-----------AGCGA---------------------A----GTC-------------------TTAA--AGTTTG---GAATA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-AC--GACGACCAGC---T--A--------------------------------ATTGTGAGCC------------ACC-TA--------AGGTCCCGATCC
droEug1 scf7180000409474:2396578-2396736 + GAAGATCAAGCAGTGAAA-----------ACA-A---------------------------------------AAT-----------CAGTTCG---GAACA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTGCT-------AGTCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAT-AA--TACAACCAGC---T--A--------------------------------ATAGTGAATC------------TACCAAA------ACGGTCCCGATCC
droBia1 scf7180000302143:3060054-3060211 - GACGATCCAGCAGTGAAA--------------GA---------------------A----GTA----------AAT-----------CAGCTCG---GGACA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAA-AA--GACGACCAGC---A--A--------------------------------AGTGTGAAGC------------ACCCGA--------AGGTCCCGATCC
droTak1 scf7180000415384:83764-83922 + GAGGATCCAGCAGTGAAA-----------A--AA---------------------A----GTA----------AAA-----------CAGTTCG---GAACA-GTAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAA-AA--GACGACCAGC---T--T--------------------------------ATTGTGAACC------------AACCAA--------AGGTCTCGATCT
droEle1 scf7180000491201:2014227-2014399 - GAGGATCCAGCAGTGAAA-----------CATAG---------------------A----TCA---AAGCAGCAAGCAAC--TCGA--A----G---GAAAA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAA-AA--GACGACCATC---TCGA--------------------------------ACAGTGAATT------------ATCGAA--------AGGCCCCGATCT
droRho1 scf7180000780066:73366-73525 + GAGGATCCAGCAGTGAAC-----------CAAAA---------------------A----GTA----------AAT-----------AAGCTCG---GAAAA-GCAATTATACGACAAACCTTGTTCGGTTTTGCA----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTTGAA-AA--GACGACCAGC---T--A--------------------------------ACTGTGATCA------------AAC-AA--------AGGCCTCGATAT
droFic1 scf7180000454039:848270-848427 - GAAGATCAAAGAGTGAAC--------------AA---------------------A----TAC-------------------TAGA--AGCTCC---GAAAA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAG-AA--GACGACCAGT---A--A--------------------------------AGTGTTAACT------------ACCAAA--------AGGTCCCGATCC
droKik1 scf7180000302679:89628-89775 - GAGGT-AA---------------------GGCAA---------------------A----GTG----------AAG-------------CTTCG---GCAAA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCAAA-AC--GACGACCAGC---A--A----T---------------------------CCAGTGAACC------------AGC-AA--------AGGTCCCGAACT
droAna3 scaffold_13266:9731084-9731230 + dan-mir-309 Known_mirbase GAAGAGCCGCGAGTTAC---------------AA---------------------A----GTG------------------------------------AAG-ATCATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTATAA-AAAAGCCGTCCAGA---C--A--------------------------------TCTGTGAGCC------------CCCAAC--------TGGCTACGATCT
droBip1 scf7180000396427:874063-874212 + GAAGAGCCGCGAGTTAC---------------AA---------------------A----GTG------------------------------------AAA-GCCATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAA-AATGAACGTCCAGA---A--A--------------------------------TCTGTGAATC------------CTCCGC-----TCCGGGTCACGATCT
dp5 3:12677823-12678009 - dps-mir-309 Known_mirbase GAGGTGCCCGAAGTGAAG-----------GAGAA----AAA------GAAAGAAAA----ACA----------AAC-----------TATCTCG---GAA----CTATTATACGATAAACTTTGTTCAGTTTTGCC----------------AACTTGCT-------TG-CAGCACTGGGTGAAGTTTGTCTTATAATCCCACAGTA--AGCGATCAGC---G--A------------------GCGTCTCAGCGCACATTGTGAACG------------ACGA-----TACCGAGGCAACGATCC
droPer2 scaffold_2:8905651-8905843 + dpe-mir-309 Known_mirbase GAGGTGCCCGAAGTGAAG-----------GAGAA----AAAGAAAAAGAAAAAAAA----ACG----------AAC-----------TATCTCG---GAA----CTATTATACGATAAACTTTGTTCAGTTTTGCC----------------AACTTGCT-------TG-CAGCACTGGGTGAAGTTTGTCTTATAATCCCACAGTA--AGCGATCAGC---G--A------------------GCGTCTCAGCGCACATTGTGAACG------------ACGA-----TACCGAGGCAACGATCC
droWil2 scf2_1100000004514:1652006-1652213 - dwi-mir-3 Known_mirbase CAGT--GTAACAGTGAATAGTTCATCTAAGAAAA---------------------A----CTC----------AAT-----------CATTTCA----TATA--ATATTATATGATAAACTTTGTTCAGTTTTGCAATCAAAAAATCAAGAAAATTCCTT-------AG-CATCACTGGGTGAAGTTTGTCTTATAATCTTTAA-AC--TACAATCAAAATAC--A--------------ATTGGAGTGTTAAAAAAAAAGGAGAGTA------------ATCG-----AATTTAGACCATGATTT
droVir3 scaffold_12875:4111771-4111961 + dvi-mir-309 Known_mirbase AAGGAACCGGCGCAAAGA-----------AGA-A--------------------------GCC------------C-----------AAT---A---TAACA-AATATTATATGGTAAACTTTGTTCAGTTTTGCC----------------AGGCTCTT-TTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCGCAAA-AA--GAACAGCAAAA--A--AAA-ATAAAAATAAAACA-------------ATATTATTAA--ATAAAAAT----ACC-AG-AATCTCATAGCTCTGCTTT
droMoj3 scaffold_6496:20937058-20937242 - dmo-mir-309 Known_mirbase AAGGATCG--GAGTGGCA---------------CAGTGCA---------------TATATATA-------------------------TATATACAAGAACAGAATATTATAAGGTAAACTTTGTTCAGTTTTGCC----------------GGGTTCTATGTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCGAAAC-GA--AACAGCAAGG---A--AAAAGT-----------------CC-A--GTCAATT------C------------AAC-GGAACTCTCGCAGCTCTACTTT
droGri2 scaffold_5621:2477-2662 + dgr-mir-309-2 Known_mirbase AAGGATCGCTTAGAGTAA-----------CAGAA--------------------------A--------------T-AAGTCTAAAA-AATATA---TAATT--ACATTATATGGCAAACCTTGTTCAGTTTTGAC----------------AACTTTGTTTCTGTGCATCATCACTGGGTGAAGTTTGTCGTATAATC--GAA-AT--G--GATCAGC---T--A--------------------------------AAAGTTGTACATAAAAATGCTTGCC-AA-ATTTTCATAGCTCTGCTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
GATGATCCAGCAGTGAAA-----------ACAAA---------------------A----GTATCAAAGC--------------AA--AGTTTG---GAACA-GCAATTATACGACAAACCTTGTTCTGTTTTGCC----------------AATTTCCT-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-AC--GACGACCAGC---A--G----C-------------------------CAAGTGTGAACC------------ATC-AA--------AGGTCCTGATCCSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA................................................................................................................2211191.001191037694180100000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT.................................................................................................................2111020.001020028361800200000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC.................................................................................................................211228.002280022710000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC..................................................................................................................20194.0094008770000000
................................................................................................................CGACAAACCTTGTTCTGTTTTG............................................................................................................................................................................22128.0028002800000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAA...............................................................................................................2318.00800350000000
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA................................................................................................................2116.00602400000000
................................................................................................................CGACAAACCTTGTTCTGTTTTGCC----------------..........................................................................................................................................................2416.00600600000000
................................................................................................................CGACAAACCTTGTTCTGTTTT.............................................................................................................................................................................2115.00500410000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTC...................................................................................................................1915.00500230000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTC................................................................................................................2214.00400310000000
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCT.................................................................................................................2214.00400310000000
............................................................................................................TATACGACAAACCTTGTTCTGT................................................................................................................................................................................2213.00300300000000
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCCTA................................................................................................................2013.00300210000000
.............................................................................................................ATACGACAAACCTTGTTCTGTT...............................................................................................................................................................................2212.00200200000000
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCCT.................................................................................................................1912.00200200000000
................................................................................................................CGACAAACCTTGTTCTGTTT..............................................................................................................................................................................2012.00200200000000
...............................................................................................................ACGACAAACCTTGTTCTGTTTTGCC----------------..........................................................................................................................................................2512.00200200000000
................................................................................................................CGACAAACCTTGTTCTGT................................................................................................................................................................................1812.00200110000000
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCT.................................................................................................................2012.00200200000000
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCCC.................................................................................................................1912.00200200000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT................................................................................................................2212.00200110000000
.............................................................................................................ATACGACAAACCTTGTTCTGTC...............................................................................................................................................................................2211.00100100000000
..............................................................................................................TACGACAAACCTTGTTCTGTTTT.............................................................................................................................................................................2311.00100100000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCG.................................................................................................................2111.00100100000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAC...............................................................................................................2311.00100100000000
...................................................................................................................................................................................GTAAAGTTTGTCCTATAATCC..........................................................................................................2111.00100100000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTCC...............................................................................................................2311.00100100000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT...............................................................................................................2311.00100000010000
..................................................................................................................................................................................................TAATCCCGAA-AC--GACGACCAGC---A--G----C-------------------------..................................................2511.00100100000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTG................................................................................................................2211.00100010000000
..............................................................................................................TACGACAAACCTTGTTCTGTTTTGC...........................................................................................................................................................................2511.00100100000000
........................................................................................................................................................................................................................................................................AACC------------ATC-AA--------AGGTCCTGATCC2111.00100100000000
...............................................................................................................................................................T-------AGCCAGCACTGGGTAAAGTTTGTCCTA................................................................................................................2811.00100100000000
............................................................................................................TATACGACAAACCTTGTTCTGC................................................................................................................................................................................2211.00100100000000
................................................................................................................CGACAAACCTTGTTCTGTTTTGT...........................................................................................................................................................................2311.00100100000000
..........................................................................................................................................................................CAGCACTGGGTAAAGTTTGTCCC.................................................................................................................2311.00100100000000
...............................................................................................................................................................................CTGGGTAAAGTTTGTCCTA................................................................................................................1911.00100100000000
................................................................................................................CGACAAACCTTGTTCTGTTTTGC...........................................................................................................................................................................2311.00100100000000
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCC.................................................................................................................2011.00100100000000
................................................................................................................................................................................TGGGTAAAGTTTGTCCTA................................................................................................................1811.00100100000000
...........................................................................................................................................................................................................................................................................C------------ATC-AA--------AGGTCCTGATCC1811.00100100000000
................................................................................................................CGACAAACCTTGTTCTGC................................................................................................................................................................................1830.33100100000000
droEre2
GAGGATCCCGCAGTGAAA-----------AGTAA---------------------A----GTA----------TAC-----------GAGTTTG---GAACA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-AC--GACGACCAGC---C--A--------------------------------ATTGTGAACC------------CAC-CA--------AGGTCCTGATCCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA................................................................................................................221612.00612141850384110
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT.................................................................................................................211280.0028021710187100
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC..................................................................................................................20119.00195806000
................................................................................................................CGACAAACCTTGTTCGGTTTTG............................................................................................................................................................................22114.00145207000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC.................................................................................................................21114.001401400000
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA................................................................................................................2116.0066000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTC................................................................................................................2215.0050104000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTC...................................................................................................................1915.0050104000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAA...............................................................................................................2314.0043001000
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCT.................................................................................................................2014.0044000000
................................................................................................................CGACAAACCTTGTTCGGTTTT.............................................................................................................................................................................2114.0041101010
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT................................................................................................................2213.0031002000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAC...............................................................................................................2312.0021100000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAG...............................................................................................................2312.0021001000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCA.................................................................................................................2112.0020101000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT...............................................................................................................2312.0020002000
...............................................................................................................................................................................CTGGGTAAAGTTTGTCCT.................................................................................................................1811.0010100000
............................................................................................................................................................................GCACTGGGTAAAGTTTGT....................................................................................................................1811.0011000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTATT..............................................................................................................2411.0010001000
................................................................................................................CGACAAACCTTGTTCGGTTTTGT...........................................................................................................................................................................2311.0010001000
..............................................................................................................TACGACAAACCTTGTTCGGTTT..............................................................................................................................................................................2211.0010100000
..............................................................................................................TACGACAAACCTTGTTCGGTTTTG............................................................................................................................................................................2411.0010001000
................................................................................................................CGACAAACCTTGTTCGGTTTTT............................................................................................................................................................................2211.0010001000
...........................................................................................................................................................................................................................................................................C------------CAC-CA--------AGGTCCTGATCC1811.0010100000
................................................................................................................CGACAAACCTTGTTCGGTTT..............................................................................................................................................................................2011.0011000000
....................................................................................................................................................................................TAAAGTTTGTCCTATAATCCCG........................................................................................................2211.0010001000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTG................................................................................................................2211.0011000000
droSec2
GAGCATCCAGCAGTGAAA-----------AGCAA---------------------T----GTC-------------------TTAA--AGTTTG---GAACA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-AC--GACGACCAGC---T--A--------------------------------ATTGTGAATC------------ACC-AA--------AGGTCCCGATCCSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA................................................................................................................2217841.0078416357493280
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT.................................................................................................................2112496.0024961722371106
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC..................................................................................................................201146.00146001433
................................................................................................................CGACAAACCTTGTTCGGTTTTG............................................................................................................................................................................221106.00106201031
............................................................................................................................................................................GCACTGGGTAAAGTTTGTC...................................................................................................................19151.005101491
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAA...............................................................................................................23133.003300321
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT...............................................................................................................23124.002400240
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCT.................................................................................................................22112.001200120
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCCTA................................................................................................................20111.001100110
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAC...............................................................................................................23110.001000100
................................................................................................................CGACAAACCTTGTTCGGTTTT.............................................................................................................................................................................2118.0080080
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTG................................................................................................................2217.0070070
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA................................................................................................................2114.0043010
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC.................................................................................................................2114.0040040
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT................................................................................................................2213.0030030
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTC................................................................................................................2213.0030030
..........................................................................................................................................................................CAGCACTGGGTAAAGTTTGTCCT.................................................................................................................2313.0030030
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGTCC..................................................................................................................2113.0030030
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCCT.................................................................................................................1913.0030030
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCT.................................................................................................................2013.0030030
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCG.................................................................................................................2113.0031020
................................................................................................................CGACAAACCTTGTTCGGTTTTGT...........................................................................................................................................................................2312.0020020
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCA..................................................................................................................2012.0020020
................................................................................................................CGACAAACCTTGTTCGGTT...............................................................................................................................................................................1912.0020020
................................................................................................................................................................................TGGGTAAAGTTTGTCCTA................................................................................................................1812.0020020
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCA.................................................................................................................2112.0020020
..........................................................................................................................................................................CAGCACTGGGTAAAGTTTGTCC..................................................................................................................2211.0010010
................................................................................................................CGACAAACCTTGTTCGGTTTTGC...........................................................................................................................................................................2311.0010010
................................................................................................................CGACAAACCTTGTTCGGT................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................CCAGCACTGGGTAAAGTTTGT....................................................................................................................2111.0010010
.................................................................................................................GACAAACCTTGTTCGGTTTTG............................................................................................................................................................................2111.0010010
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTAA...............................................................................................................2211.0010010
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCTA.................................................................................................................2121.0020020
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCTC................................................................................................................2311.0010010
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCC..................................................................................................................1811.0010010
...............................................................................................................................................................................CTGGGTAAAGTTTGTCCTA................................................................................................................1911.0010010
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCC..................................................................................................................1911.0010010
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGT....................................................................................................................1911.0010010
............................................................................................................................................................................GCACTGGGTAAAGTTTGT....................................................................................................................1811.0010010
droSim2
GAGGATCTAGTAGTGCAA-----------AGC-A---------------------A----GTC-------------------TTAA--AGTTTG---GAACA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-AC--GACGACCAGC---T--A--------------------------------ATTGTGAACC------------ACC-AA--------AGGTCCCGATCCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA................................................................................................................22137772.00377721042115128481930317295197400000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT.................................................................................................................2111373.001373001100374401339260600000
................................................................................................................CGACAAACCTTGTTCGGTTTTG............................................................................................................................................................................221406.0040610380100001302000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAA...............................................................................................................23148.00480000000018250500000
.................................................................................................................................................................................GGGTAAAGTTTGTCCTA................................................................................................................17137.0037000000006310000000
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCCTA................................................................................................................20136.0036000000002780100000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC..................................................................................................................20133.0033000000002502600000
...............................................................................................................................................................................CTGGGTAAAGTTTGTCCTA................................................................................................................19130.00300000000011190000000
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA................................................................................................................21126.0026000100001690000000
..................................................................................................................................................................................GGTAAAGTTTGTCCTA................................................................................................................16123.0023000000007160000000
................................................................................................................CGACAAACCTTGTTCGGTTTT.............................................................................................................................................................................21118.001800000000850500000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTC................................................................................................................22114.001400000000670100000
...................................................................................................................................................................................GTAAAGTTTGTCCTA................................................................................................................15113.0013000000003100000000
................................................................................................................................................................................TGGGTAAAGTTTGTCCTA................................................................................................................18112.001200000000570000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTC...................................................................................................................19111.0011000001000001000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTG................................................................................................................2218.00800000000340100000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT................................................................................................................2218.00800000000410300000
..........................................................................................................................................................................CAGCACTGGGTAAAGTTTGTCCT.................................................................................................................2318.00800200000140100000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT...............................................................................................................2316.00600000000040200000
............................................................................................................................................................................GCACTGGGTAAAGTTTGT....................................................................................................................1816.00600000000420000000
.........................................................................................................................................................................CCAGCACTGGGTAAAGTTTGTC...................................................................................................................2215.00500000000410000000
................................................................................................................CGACAAACCTTGTTCGGTTTTGT...........................................................................................................................................................................2314.00400200000000200000
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCCT.................................................................................................................1914.00400000000210100000
.........................................................................................................................................................................CCAGCACTGGGTAAAGTTTGTCCTA................................................................................................................2514.00400000000310000000
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCTA................................................................................................................2314.00400000000310000000
..................................................................................................................................................................................GGTAAAGTTTGTCCT.................................................................................................................1513.00300000000120000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC.................................................................................................................2113.00300000000100200000
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCT.................................................................................................................2213.00300000000020100000
...............................................................................................................ACGACAAACCTTGTTCGGTTTT.............................................................................................................................................................................2212.00200200000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCA.................................................................................................................2112.00200000000110000000
................................................................................................................CGACAAACCTTGTTCGGTTTTA............................................................................................................................................................................2211.00100100000000000000
............................................................................................................................................................................GCACTGGGTAAAGTT.......................................................................................................................1511.00100000000100000000
................................................................................................................................................................................TGGGTAAAGTTTGTCCT.................................................................................................................1711.00100000000100000000
..........................................................................................................................................................................CAGCACTGGGTAAAGTTTGTC...................................................................................................................2111.00100000000100000000
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTAT...............................................................................................................2211.00100000000010000000
................................................................................................................CGACAAACCTTGTTCGGT................................................................................................................................................................................1811.00100000000010000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCG.................................................................................................................2111.00100100000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCTA.................................................................................................................2121.00200000000200000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAC...............................................................................................................2311.00100000000000100000
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCT.................................................................................................................2011.00100000000000100000
................................................................................................................CGACAAACCTTGTTC...................................................................................................................................................................................1530.33100000000010000000
dm3
AAGGATCCCGCAGTGAGA-----------AGCGA---------------------A----GTC-------------------TTAA--AGTTTG---GAATA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-AC--GACGACCAGC---T--A--------------------------------ATTGTGAGCC------------ACC-TA--------AGGTCCCGATCCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA................................................................................................................221372749.00372749000021172564461000000000000000060051440225181200010300040114040001000000000000000000000001184695024209914266539433475110189032812180016712949112661014102914117105000021300023000000000015031688119323100979702362411111562200000000040311805003514501002803008006210000003000001622020002001212040704401020010000442923611010100100110000166000010001301000019345311151486000007006272737500840231263190101165111022133522114311733139942011030
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT.................................................................................................................21186538.00865380000104392300000000000000001000000001074110100010800000130000200000000000000000000100086338059669620000000520800203140001394230023041750000000000000000000000007035092644536441714010131132010000020000004010010010000000010100150002001000000910040000001104041303505100000001020699201000001011000523100011014016100124441674435803221322162622379142700241431300101815611847212021341151138313002230
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC..................................................................................................................2015469.0054690000000000000000000000100000000000389700000003060000000000000000000000000000000000004105000000000000000000000000002000000000000000000000000000471291791398900000000000000000000000000000000000000000002100000000000020000000000000102000100000000003629000010000000100201001010000000001800351201010000085524004001000000021002210000300022231280000300
................................................................................................................CGACAAACCTTGTTCGGTTTTG............................................................................................................................................................................2214921.00492100000021342000000000000000000012000116000000000000000000000000000000000000000001100074521860626150001020000003103704105812250067926000000000000000000000000050269311301555501000100000000000000007030000201100300000000000000000010001000000000000000000010522126300003728100000000000000000000000000010001000000000000000082600000000000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAA...............................................................................................................2311848.00184800000015200000000000000000000000003600000000010000000100000000000000000000000000001516762414100000100300000000000128500170120000000000000000000000000182112482900010020000000000000000100000000000000000000000000000000000200000000000000000001010000000018100100000000000000000000000000000001020201000000000814100100000000100100000000000000000060000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTC................................................................................................................2211533.001533000000010000000000000000000000000060000000000000000000000000000000000000000000000143126000000000000000000000300000010000000000000100000000007345359110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010900000000000000000000000000000000000100000000000001311000000000000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTC...................................................................................................................1911527.001527000000000000000000000000000000000045500000001000000000000000000000000000000000000008034400000000000000000000040003000000000000000000000000000288475129134000000000000000000000000000000000000000000000000000000000000000000000000000001000000000041400000000000001000000000000000000002000000000000000605600600000000000010010010010000000060000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT...............................................................................................................231970.00970000000240000000000000000000000000014000000000000000000000000000000000000000000000056105940100000000000000000000001000141020000000000000000000000005118128180100000000000000000000000000000000000000000000000000000000000000000100000000000000000000008100000000000000000000000000000000000000000000000000463200000000000000000000000000000000030000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTACTG.............................................................................................................251741.0074100000000000000000000000000000000007390000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTG................................................................................................................221516.005160000001310000000000000000000000000800000000000000000000000000000000000000000000004952214000000000000010000002100020020000000000000000000000001131471000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001210000000000000000000000000000000000000000000000000373100000000000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT................................................................................................................221438.004380000003310000000000000000000000000000000000000000000000000000000000000000000000002315235000004000000000000002300000010000000000000000000000006625823310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000520000000000000000000000000000000011000001000000000201400000000000000000000000000100100020000010
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAC...............................................................................................................231426.0042600000000100000000000000000000000002200000000000000000000000000000000000000000000002737176000000001100000000221200020020000000000000000000000004353226400000000000000000000000000000000000000000000000000000000001000000000000000000000000000000760000000000000000000000000000000000000000000000000211100000000000000000000000000000000030000000
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCCTA................................................................................................................201360.00360000000000000000000000000000000000010000000000000000000000000000000000000000000000058004000000000000000000000000000000000000000000000000000003362328100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000850000000000000000000000000000000000000000000000000227000000000000000000000000000000000020000000
................................................................................................................CGACAAACCTTGTTCGGTTTT.............................................................................................................................................................................211334.00334000000000000000000000000000000000010000000000000000000000000000000000000000000000403010000000000000000000000300000070000000000000000000000004910013707100000000000000000000100000000000100000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC.................................................................................................................211189.001890000000100000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000411137000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000148000000000000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCA..................................................................................................................201178.0017800000000000000000000000000000000001770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................CTGGGTAAAGTTTGTCCTA................................................................................................................19192.0092000000000000000000000000000000000000000000000000000000000000000000000000000000000990030000000000000000000000000000000000000000000000000000011412000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000041000000000000000000000000000000000000000000
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCCT.................................................................................................................19190.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011114000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000011000000000000000000000000000000000000000000000000061000000000000000000000000000000000000000000
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA................................................................................................................21189.008900000000000000000000000000000000000000000000000000000000000000000000000000000000013102500000000000000000000430002000000000000000000000000000173000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000
................................................................................................................CGACAAACCTTGTTCGGTTTTT............................................................................................................................................................................22188.008800000010000000000000000000000000000000000000000000000000000000000000000000000000074401200000000000000000000000000000000000000000000000000000981300000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCT.................................................................................................................22172.00720000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000003700000000000000000000000000000000000000000000000000000000000000000000000000000002000000000002000000000000000000000000000000000002000000000000052200000001000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGT....................................................................................................................18170.0070000000000000000000000000000000000000000000000000000000000000000000000000000000010116100100000000000000000000000001000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000032110000000000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAG...............................................................................................................23168.006800000000000000000000000000000000000000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000002410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000100000000044100000000000000000000000010000000000000000
.................................................................................................................GACAAACCTTGTTCGGTTTTG............................................................................................................................................................................21163.0063000000020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000061124105000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................CCAGCACTGGGTAAAGTTTGTC...................................................................................................................22160.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000700010000000000000000000000000000000000000000000000000000011313000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000022100000000000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTATT..............................................................................................................24149.0049000000000000000000000000000000000000000000000000000000000000000000000000000000000103000000000000000000000000000000000000000000000000000000001210500000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000017000000000000000000000000000000000000000000
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCTA................................................................................................................23149.004900000001000000000000000000000000000000000000000000000000000000000000000000000000011003300000000000000000000300001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026000000000000000000000000000000000000000000
................................................................................................................CGACAAACCTTGTTCGGTTT..............................................................................................................................................................................20148.00480000000000000000000000000000000000420000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTG...................................................................................................................19138.00380000000000000000000000000000000000380000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCA.................................................................................................................21137.003700000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000010000000
................................................................................................................................................................................TGGGTAAAGTTTGTCCTA................................................................................................................18135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000003060100000000000000000000020000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000019000000000000000000000000000000000000000000
droEug1
GAAGATCAAGCAGTGAAA-----------ACA-A---------------------------------------AAT-----------CAGTTCG---GAACA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTGCT-------AGTCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAT-AA--TACAACCAGC---T--A--------------------------------ATAGTGAATC------------TACCAAA------ACGGTCCCGATCCSizeHit CountTotal NormTotal
No Reads
droBia1
GACGATCCAGCAGTGAAA--------------GA---------------------A----GTA----------AAT-----------CAGCTCG---GGACA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAA-AA--GACGACCAGC---A--A--------------------------------AGTGTGAAGC------------ACCCGA--------AGGTCCCGATCCSizeHit CountTotal NormTotal
No Reads
droTak1
GAGGATCCAGCAGTGAAA-----------A--AA---------------------A----GTA----------AAA-----------CAGTTCG---GAACA-GTAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAA-AA--GACGACCAGC---T--T--------------------------------ATTGTGAACC------------AACCAA--------AGGTCTCGATCTSizeHit CountTotal NormTotal
No Reads
droEle1
GAGGATCCAGCAGTGAAA-----------CATAG---------------------A----TCA---AAGCAGCAAGCAAC--TCGA--A----G---GAAAA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAA-AA--GACGACCATC---TCGA--------------------------------ACAGTGAATT------------ATCGAA--------AGGCCCCGATCTSizeHit CountTotal NormTotal
No Reads
droRho1
GAGGATCCAGCAGTGAAC-----------CAAAA---------------------A----GTA----------AAT-----------AAGCTCG---GAAAA-GCAATTATACGACAAACCTTGTTCGGTTTTGCA----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTTGAA-AA--GACGACCAGC---T--A--------------------------------ACTGTGATCA------------AAC-AA--------AGGCCTCGATATSizeHit CountTotal NormTotal
No Reads
droFic1
GAAGATCAAAGAGTGAAC--------------AA---------------------A----TAC-------------------TAGA--AGCTCC---GAAAA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAG-AA--GACGACCAGT---A--A--------------------------------AGTGTTAACT------------ACCAAA--------AGGTCCCGATCCSizeHit CountTotal NormTotal
No Reads
droKik1
GAGGT-AA---------------------GGCAA---------------------A----GTG----------AAG-------------CTTCG---GCAAA-GCAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCAAA-AC--GACGACCAGC---A--A----T---------------------------CCAGTGAACC------------AGC-AA--------AGGTCCCGAACTSizeHit CountTotal NormTotal
No Reads
droAna3
GAAGAGCCGCGAGTTAC---------------AA---------------------A----GTG------------------------------------AAG-ATCATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTATAA-AAAAGCCGTCCAGA---C--A--------------------------------TCTGTGAGCC------------CCCAAC--------TGGCTACGATCTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA................................................................................................................221207.002072492741025
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT.................................................................................................................211150.00150157948512
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC.................................................................................................................21119.00190190000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC..................................................................................................................20115.00150132000
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCT.................................................................................................................2217.007051100
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA................................................................................................................2114.004310000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT...............................................................................................................2313.003012000
...................................................................................................................CAAACCTTGTTCGGTTTTGC...........................................................................................................................................................................2012.002010100
.............................................................................................................................................................................CACTGGGTAAAGTTTGTCCT.................................................................................................................2012.002200000
............................................................................................................................................................................GCACTGGGTAAAGTTTGT....................................................................................................................1811.001010000
................................................................................................................CGACAAACCTTGTTCGGTTTT.............................................................................................................................................................................2111.001001000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT................................................................................................................2211.001001000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAG...............................................................................................................2311.001010000
...........................................................................................................................................................................AGCACTGGGTAAAGTTTGTCC..................................................................................................................2111.001001000
................................................................................................................CGACAAACCTTGTTCGGTTTTT............................................................................................................................................................................2211.001001000
.............................................................................................................ATACGACAAACCTTGTTCGGTT...............................................................................................................................................................................2211.001010000
............................................................................................................................................................................GCACTGGGTAAAGTTTGC....................................................................................................................1811.001010000
..............................................................................................................................................................................ACTGGGTAAAGTTTGTCCT.................................................................................................................1911.001010000
............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCG.................................................................................................................2111.001010000
................................................................................................................CGACAAACCTTGTTCGGTTTTG............................................................................................................................................................................2211.001000001
...............................................................................................................ACGACAAACCTTGTTCGGTTT..............................................................................................................................................................................2111.001010000
droBip1
GAAGAGCCGCGAGTTAC---------------AA---------------------A----GTG------------------------------------AAA-GCCATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAA-AATGAACGTCCAGA---A--A--------------------------------TCTGTGAATC------------CTCCGC-----TCCGGGTCACGATCTSizeHit CountTotal NormTotal
No Reads
dp5
GAGGTGCCCGAAGTGAAG-----------GAGAA----AAA------GAAAGAAAA----ACA----------AAC-----------TATCTCG---GAA----CTATTATACGATAAACTTTGTTCAGTTTTGCC----------------AACTTGCT-------TG-CAGCACTGGGTGAAGTTTGTCTTATAATCCCACAGTA--AGCGATCAGC---G--A------------------GCGTCTCAGCGCACATTGTGAACG------------ACGA-----TACCGAGGCAACGATCCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTA................................................................................................................2212449.00244907712400113200000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTT.................................................................................................................211480.00480025295015901000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAA...............................................................................................................231166.00166075909802000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCT..................................................................................................................20139.003906290400000
...........................................................................................................................................................................AGCACTGGGTGAAGTTTGTCTT.................................................................................................................22135.003501260800000
...........................................................................................................................................................................AGCACTGGGTGAAGTTTGTCTTA................................................................................................................23117.00170280700000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTC.................................................................................................................21116.001600150100000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTT................................................................................................................22113.00130130900000
................................................................................................................CGATAAACTTTGTTCAGTTTTG............................................................................................................................................................................22112.00120350400000
...........................................................................................................................................................................AGCACTGGGTGAAGTTTGTCT..................................................................................................................21111.00110170300000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAT...............................................................................................................23110.00100140500000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAC...............................................................................................................2319.0090030600000
.............................................................................................................................................................................CACTGGGTGAAGTTTGTCTTA................................................................................................................2118.0080710000000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCC..................................................................................................................2018.0080080000000
...............................................................................................................ACGATAAACTTTGTTCAGTTTT.............................................................................................................................................................................2217.0070150100000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTC................................................................................................................2216.0060060000000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTG................................................................................................................2215.0050000500000
................................................................................................................CGATAAACTTTGTTCAGTTTT.............................................................................................................................................................................2115.0050030200000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTC...................................................................................................................1914.0040040000000
..............................................................................................................TACGATAAACTTTGTTCAGTTTT.............................................................................................................................................................................2313.0030030000000
.............................................................................................................................................................................CACTGGGTGAAGTTTGTCTT.................................................................................................................2013.0030210000000
...............................................................................................................ACGATAAACTTTGTTCAGTTTC.............................................................................................................................................................................2212.0020020000000
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCTTA................................................................................................................2012.0020020000000
.............................................................................................................................................................................CACTGGGTGAAGTTTGTCTTAT...............................................................................................................2212.0020010100000
...........................................................................................................................................................................AGCACTGGGTGAAGTTTGTCC..................................................................................................................2112.0020020000000
...............................................................................................................................................................................CTGGGTGAAGTTTGTCTTA................................................................................................................1911.0010100000000
..............................................................................................................TACGATAAACTTTGTTCAGTTT..............................................................................................................................................................................2211.0010010000000
...........................................................................................................................................................................AGCACTGGGTGAAGTTTGTC...................................................................................................................2011.0010010000000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAAG..............................................................................................................2411.0010010000000
................................................................................................................CGATAAACTTTGTTCAGTTT..............................................................................................................................................................................2011.0010000000010
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTCA...............................................................................................................2311.0010000100000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTATT..............................................................................................................2411.0010010000000
...........................................................................................................................................................................AGCACTGGGTGAAGTTTGTCTTT................................................................................................................2311.0010010000000
................................................................................................................CGATAAACTTTGTTCAGTTTTGT...........................................................................................................................................................................2311.0010010000000
...............................................................................................................................................................................CTGGGTGAAGTTTGTCTTAA...............................................................................................................2011.0010010000000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTG.................................................................................................................2111.0010010000000
.................................................................................................................GATAAACTTTGTTCAGTTTTG............................................................................................................................................................................2111.0010100000000
................................................................................................................CGATAAACTTTGTTCAGTTTTGC...........................................................................................................................................................................2311.0010010000000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTCC...............................................................................................................2311.0010000100000
droPer2
GAGGTGCCCGAAGTGAAG-----------GAGAA----AAAGAAAAAGAAAAAAAA----ACG----------AAC-----------TATCTCG---GAA----CTATTATACGATAAACTTTGTTCAGTTTTGCC----------------AACTTGCT-------TG-CAGCACTGGGTGAAGTTTGTCTTATAATCCCACAGTA--AGCGATCAGC---G--A------------------GCGTCTCAGCGCACATTGTGAACG------------ACGA-----TACCGAGGCAACGATCCSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTA................................................................................................................221207.0020715101710101
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTT.................................................................................................................21148.00486138021
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAA...............................................................................................................23123.00230218021
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCT..................................................................................................................2015.005102020
...........................................................................................................................................................................AGCACTGGGTGAAGTTTGTCTT.................................................................................................................2215.005113000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTT................................................................................................................2212.002002000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAT...............................................................................................................2312.002001010
................................................................................................................CGATAAACTTTGTTCAGTTTTG............................................................................................................................................................................2212.002002000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTC...................................................................................................................1911.001001000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTA.................................................................................................................2111.001001000
...........................................................................................................................................................................AGCACTGGGTGAAGTTTGTCT..................................................................................................................2111.001001000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTG................................................................................................................2211.001001000
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCTTA................................................................................................................2011.001001000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCC..................................................................................................................2011.001100000
................................................................................................................CGATAAACTTTGTTCAGTTTT.............................................................................................................................................................................2111.001100000
............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTC................................................................................................................2211.001000010
droWil2
CAGT--GTAACAGTGAATAGTTCATCTAAGAAAA---------------------A----CTC----------AAT-----------CATTTCA----TATA--ATATTATATGATAAACTTTGTTCAGTTTTGCAATCAAAAAATCAAGAAAATTCCTT-------AG-CATCACTGGGTGAAGTTTGTCTTATAATCTTTAA-AC--TACAATCAAAATAC--A--------------ATTGGAGTGTTAAAAAAAAAGGAGAGTA------------ATCG-----AATTTAGACCATGATTTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTA................................................................................................................22112777.001277712601273515
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAA...............................................................................................................2313479.00347904034705
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTT.................................................................................................................2111173.00117308011650
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCTTA................................................................................................................20191.0091000910
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAT...............................................................................................................23172.0072010710
............................................................................................................................................................CCTT-------AG-CATCACTGGGTGAAG.........................................................................................................................21147.0047000470
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTT................................................................................................................22135.0035000350
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCTTAA...............................................................................................................21126.0026000260
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAC...............................................................................................................23123.0023000230
...............................................................................................................................................................T-------AG-CATCACTGGGTGAAGTTTG.....................................................................................................................22120.0020000200
.............................................................................................................................................................................CACTGGGTGAAGTTTGTCTTA................................................................................................................21119.0019040150
............................................................................................................................................................CCTT-------AG-CATCACTGGGTGAAGT........................................................................................................................22118.0018000180
................................................................................................................TGATAAACTTTGTTCAGTTTT.............................................................................................................................................................................21114.0014000140
....................................................................................................................AAACTTTGTTCAGTTTTGCAA.........................................................................................................................................................................21113.0013000130
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAG...............................................................................................................23112.0012000120
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTG................................................................................................................22112.0012000120
...............................................................................................................................................................T-------AG-CATCACTGGGTGAAGTTTGC....................................................................................................................23110.0010000100
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAAT..............................................................................................................24110.0010000100
...............................................................................................................................................................T-------AG-CATCACTGGGTGAAGTTTGT....................................................................................................................2319.00901080
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCT..................................................................................................................2018.00800080
....................................................................................................................AAACTTTGTTCAGTTTTGCAAT........................................................................................................................................................................2218.00800080
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTA.................................................................................................................2117.00700070
...................................................................................................................TAAACTTTGTTCAGTTTTGCAA.........................................................................................................................................................................2217.00700070
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCTT.................................................................................................................1917.00700070
..............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTTTG.....................................................................................................................2317.00700070
................................................................................................................TGATAAACTTTGTTCAGTTTTG............................................................................................................................................................................2216.00601050
.............................................................................................................................................................................CACTGGGTGAAGTTTGTCTTAA...............................................................................................................2216.00600060
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCT..................................................................................................................2115.00500050
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTATA..............................................................................................................2415.00500050
...................................................................................................................TAAACTTTGTTCAGTTTTGCA..........................................................................................................................................................................2114.00401030
..............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTTTGT....................................................................................................................2414.00400040
..............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTT.......................................................................................................................2114.00400040
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAAG..............................................................................................................2414.00400040
........................................................................................................................TTTGTTCAGTTTTGCAATCAAA....................................................................................................................................................................2213.00300030
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAAC..............................................................................................................2413.00300030
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCTT.................................................................................................................2213.00300030
....................................................................................................................AAACTTTGTTCAGTTTTGCAATC.......................................................................................................................................................................2313.00300030
.......................................................................................................................................................................AG-CATCACTGGGTGAAGTTTG.....................................................................................................................2113.00300030
...............................................................................................................................................................................CTGGGTGAAGTTTGTCTTAA...............................................................................................................2013.00300030
........................................................................................................................TTTGTTCAGTTTTGCAATCAA.....................................................................................................................................................................2113.00301020
............................................................................................................................................................................TCACTGGGTGAAGTTTGTC...................................................................................................................1913.00300030
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTTA...............................................................................................................2312.00200020
...............................................................................................................ATGATAAACTTTGTTCAGTTTT.............................................................................................................................................................................2212.00200020
................................................................................................................TGATAAACTTTGTTCAGTTTTGT...........................................................................................................................................................................2312.00200020
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTGA...............................................................................................................2312.00200020
................................................................................................................................................................................TGGGTGAAGTTTGTCTTA................................................................................................................1812.00200020
...........................................................................................................................................................TCCTT-------AG-CATCACTGGGTGAAGT........................................................................................................................2312.00200020
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCTTT................................................................................................................2311.00100010
...............................................................................................................................................................T-------AG-CATCACTGGGTGAAGT........................................................................................................................1911.00100010
..............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTTTGA....................................................................................................................2411.00100010
........................................................................................................................TTTGTTCAGTTTTGCAATCAAAAA..................................................................................................................................................................2411.00100010
.............................................................................................................................................................................CACTGGGTGAAGTTTGTCTT.................................................................................................................2011.00101000
......................................................................................................................................CAATCAAAAAATCAAGAAAATTCCTT-------...........................................................................................................................................2611.00100010
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTC................................................................................................................2211.00100010
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAGC..............................................................................................................2411.00100010
............................................................................................................................................................................TCACTGGGTGAAGTTTGA....................................................................................................................1811.00100010
.......................................................................................................................CTTTGTTCAGTTTTGCAATCA......................................................................................................................................................................2111.00100010
....................................................................................................................................................AGAAAATTCCTT-------AG-CATCACTGGGTGA...........................................................................................................................2711.00100010
.......................................................................................................................................................................AG-CATCACTGGGTGAAGTTTGTC...................................................................................................................2311.00100010
..............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTTTGC....................................................................................................................2411.00100010
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTC...................................................................................................................2011.00100010
...........................................................................................................................................................TCCTT-------AG-CATCACTGGGTGAAGTTTGTC...................................................................................................................2811.00100010
........................................................................................................................................ATCAAAAAATCAAGAAAATTCCTT-------AG-C.......................................................................................................................................2711.00100010
............................................................................................................................................................................TCACTGGGTGAAGTTTGT....................................................................................................................1811.00100010
.............................................................................................................................................................CTT-------AG-CATCACTGGGTGAAG.........................................................................................................................2011.00100010
...............................................................................................................................................................T-------AG-CATCACTGGGTGAAGTT.......................................................................................................................2011.00100010
............................................................................................................................................................CCTT-------AG-CATCACTGGGTGA...........................................................................................................................1911.00100010
........................................................................................................................TTTGTTCAGTTTTGCAATC.......................................................................................................................................................................1911.00100010
..............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTTT......................................................................................................................2211.00100010
...............................................................................................................................................................T-------AG-CATCACTGGGTGAAGTTT......................................................................................................................2111.00100010
........................................................................................................................TTTGTTCAGTTTTGCAAT........................................................................................................................................................................1811.00100010
............................................................................................................................................................CCTT-------AG-CATCACTGGGTGAA..........................................................................................................................2011.00100010
....................................................................................................................AAACTTTGTTCAGTTTTGCA..........................................................................................................................................................................2011.00100010
............................................................................................................................................................................TCACTGGGTGAAGTTTGTTA..................................................................................................................2020.50100010
droVir3
AAGGAACCGGCGCAAAGA-----------AGA-A--------------------------GCC------------C-----------AAT---A---TAACA-AATATTATATGGTAAACTTTGTTCAGTTTTGCC----------------AGGCTCTT-TTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCGCAAA-AA--GAACAGCAAAA--A--AAA-ATAAAAATAAAACA-------------ATATTATTAA--ATAAAAAT----ACC-AG-AATCTCATAGCTCTGCTTTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTA................................................................................................................22119425.0019425004546600000002110664110000000101102202289043365814141185202058906690320287108226365931121816110282947130001491511117300100789374377225251
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGT.................................................................................................................2111582.001582001437000000001300000000000000100115131345133000002118352916335181064400042311300010675010000611501494835
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAA...............................................................................................................2311459.001459201135000000001200000000000010000003906068195960000373567147457272210757000529500000432900000125162288
................................................................................................................TGGTAAACTTTGTTCAGTTTTG............................................................................................................................................................................221454.004540002000000000000000000000000000046020671041490000313601001000000001100000221200000074058
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAT...............................................................................................................231247.002470019100000000000000000000000000000066122000006677711427230000424000001240000008111030
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTC................................................................................................................221239.00239100380000000001000000100000001000000030000001562427614177435000193100000321000001090000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCG..................................................................................................................20176.007600023000000000000000000000000000100414200000541322011000000070000200200000014402
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGC.................................................................................................................21165.006500062000000000000000000000000000000200000000000000000000000000000000100000000000
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCGTA................................................................................................................20157.0057000500000000050000000000000000001046105000000000000000000000200000000000000010000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATT..............................................................................................................24149.004900015000000000000000000000000000000010000000328743100200000000000001000000000110
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAC...............................................................................................................23146.004600027000000000000000000000000000000000000000053501101000000020000000000000000001
......................................................................................................................................CC----------------AGGCTCTT-TTTGTGCG-CA......................................................................................................................................20129.00290000000000000000000000000000000040239800000010000000000000010000000000100000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTT................................................................................................................22129.00290009000000000000000000000000000000100100000012202311010000020000000200000000010
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGTA................................................................................................................23121.002100010000000000000000000000000000000100100000111000000001000020000000100000010001
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGT.................................................................................................................22120.00200005000000000000000000000000000010002100000100101000000000030000010100000030000
......................................................................................................................................CC----------------AGGCTCTT-TTTGTGCG-CATCACTGGGTGAAGTTTGTCGTA................................................................................................................42117.001700000000000000000000000000000000000000000001160000000000000000000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTG................................................................................................................22117.00170002000000001000000000000000000000111000000100100001000000070000000000000000010
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAG...............................................................................................................23112.00120003000000000000000000000000000000101000000100111000000000010000000100000000001
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATA..............................................................................................................24112.00120001000000000000000000000000000000020000000130001000000000110000000100000000001
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAAC..............................................................................................................2418.0080000000000000000000000000000000000000000001210111000100000000000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTCA...............................................................................................................2318.0080000000000000000000000000000000000003000000010000000000000040000000000000000000
................................................................................................................TGGTAAACTTTGTTCAGTTTT.............................................................................................................................................................................2118.0080000000000000000000000000000000000033100000000000000000000000000000000000010000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATC..............................................................................................................2418.0080002000000000000000000000000000000000000000000130010000000010000000000000000000
.............................................................................................................................................................................CACTGGGTGAAGTTTGTCGTA................................................................................................................2117.0070002000000000100000000000000000000101100000000000000000000010000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAAT..............................................................................................................2417.0070002000000000000000000000000000000001000000001000000000000020000001000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAAG..............................................................................................................2417.0070001000000000000000000000000000000001100000111000000000000000000000000000000100
............................................................................................................................................................................TCACTGGGTGAAGTTTGTC...................................................................................................................1917.0070000000000000000000000000000000000110000000100110010000000000000000000000010000
................................................................................................................TGGTAAACTTTGTTCAGTTTTGC...........................................................................................................................................................................2315.0050003000000000000000000000000000000000000001100000000000000000000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATTT.............................................................................................................2515.0050000000000000000000000000000000000000000000010001010000000110000000000000000000
................................................................................................................................................................................TGGGTGAAGTTTGTCGTA................................................................................................................1815.0050001000000000000000000000000000010001000000000000000000000020000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATAA.............................................................................................................2515.0050000000000000000000000000000000000000000000020010001000000010000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGG.................................................................................................................2115.0050004000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................TGGTAAACTTTGTTCAGTTT..............................................................................................................................................................................2014.0040000000000000000000000000000000000001000000110000000000000000000000000000000010
............................................................................................................................................................................TCACTGGGTGAAGTTTGT....................................................................................................................1814.0040000000000000000000000000000000000010100000020000000000000000000000000000000000
................................................................................................................TGGTAAACTTTGTTCAGTTTTGCC----------------..........................................................................................................................................................2413.0030001000000000000000000000000000000000000000100001000000000000000000000000000000
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCGTAA...............................................................................................................2113.0030000000000000000000000000000000000101000000000000000000000010000000000000000000
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCG..................................................................................................................2113.0030001000000000000000000000000000000000000000000000000000000010000000000000000001
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTCC...............................................................................................................2312.0020000000000000000000000000000000000000000000100000000000000010000000000000000000
..................................................................................................................................................................................................................................................................................................CTCATAGCTCTGCTTT1612.0020000000000000000000000000000000000000000000110000000000000000000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAACC.............................................................................................................2512.0020000000000000000000000000000000000000000000001100000000000000000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAATC.............................................................................................................2512.0020000000000000000000000000000000000000000000000200000000000000000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATG..............................................................................................................2412.0020001000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................CTGGGTGAAGTTTGTCGTA................................................................................................................1912.0020000000000000000000000000000000000010100000000000000000000000000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTTA...............................................................................................................2311.0010000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGAC................................................................................................................2211.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AGA-A--------------------------GCC------------C-----------AAT---A---TAACA-AAT........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................AGGCTCTT-TTTGTGCG-CA......................................................................................................................................1811.0010000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCT..................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTGC...............................................................................................................2311.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
AAGGATCG--GAGTGGCA---------------CAGTGCA---------------TATATATA-------------------------TATATACAAGAACAGAATATTATAAGGTAAACTTTGTTCAGTTTTGCC----------------GGGTTCTATGTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCGAAAC-GA--AACAGCAAGG---A--AAAAGT-----------------CC-A--GTCAATT------C------------AAC-GGAACTCTCGCAGCTCTACTTTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTA................................................................................................................22116785.00167855234933144214
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGT.................................................................................................................2113875.00387572912235685
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTC................................................................................................................221620.00620240105770
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGC.................................................................................................................211584.0058400005840
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAA...............................................................................................................231540.005400162003771
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAT...............................................................................................................231347.00347020003270
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCG..................................................................................................................201153.00153128111220
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAC...............................................................................................................23177.00770100760
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTT................................................................................................................22164.00640500590
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCGTA................................................................................................................20148.004803000180
..................................................................................................................GTAAACTTTGTTCAGTTTTGCC----------------..........................................................................................................................................................22134.00340000340
.............................................................................................................................................................................CACTGGGTGAAGTTTGTCGTA................................................................................................................21123.00230000230
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGT.................................................................................................................22121.00210100200
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGG.................................................................................................................21111.00110000110
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATT..............................................................................................................24111.00110000110
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCG..................................................................................................................21110.0010020080
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCGT.................................................................................................................19110.0010040060
..................................................................................................................GTAAACTTTGTTCAGTTTTGC...........................................................................................................................................................................2119.009000090
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATC..............................................................................................................2419.009000090
............................................................................................................................................................................TCACTGGGTGAAGTTTGTC...................................................................................................................1919.009010080
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGC.................................................................................................................2219.009000090
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTG................................................................................................................2218.008040040
......................................................................................................................................CC----------------GGGTTCTATGTTGTGCG-CA......................................................................................................................................2118.008050030
...............................................................................................................................................................................CTGGGTGAAGTTTGTCGTA................................................................................................................1917.007000070
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGA.................................................................................................................2117.007000070
................................................................................................................................................................................TGGGTGAAGTTTGTCGTA................................................................................................................1817.007020050
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATA..............................................................................................................2416.006010050
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGAC................................................................................................................2215.005000050
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAG...............................................................................................................2315.005030020
......................................................................................................................................CC----------------GGGTTCTATGTTGTGCG-C.......................................................................................................................................2015.005000050
................................................................................................................AGGTAAACTTTGTTCAGTTTTG............................................................................................................................................................................2215.005030020
................................................................................................................AGGTAAACTTTGTTCAGTTTT.............................................................................................................................................................................2114.004020020
.............................................................................................................................................................................CACTGGGTGAAGTTTGTCGT.................................................................................................................2014.004000040
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTC.................................................................................................................2113.003010020
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAAT..............................................................................................................2413.003010020
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTCA...............................................................................................................2313.003030000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGGC................................................................................................................2213.003010020
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGTC................................................................................................................2313.003000030
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGTA................................................................................................................2313.003010020
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCGTC................................................................................................................2012.002020000
...............................................................................................................AAGGTAAACTTTGTTCAGTTTT.............................................................................................................................................................................2212.002020000
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTA.................................................................................................................2112.002000020
...........................................................................................................................................................................ATCACTGGGTGAAGTTTGTCT..................................................................................................................2112.002000020
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCAC.................................................................................................................2112.002000020
.............................................................................................................................................................................CACTGGGTGAAGTTTGTCGTC................................................................................................................2112.002100010
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTTA...............................................................................................................2312.002020000
............................................................................................................................................................................TCACTGGGTGAAGTTTGT....................................................................................................................1812.002000020
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCC..................................................................................................................2012.002000020
............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATG..............................................................................................................2412.002000020
................................................................................................................AGGTAAACTTTGTTCAGTTTTGC...........................................................................................................................................................................2311.001000010
..............................................................................................................................................................................ACTGGGTGAAGTTTGTCGTAA...............................................................................................................2111.001010000
droGri2
AAGGATCGCTTAGAGTAA-----------CAGAA--------------------------A--------------T-AAGTCTAAAA-AATATA---TAATT--ACATTATATGGCAAACCTTGTTCAGTTTTGAC----------------AACTTTGTTTCTGTGCATCATCACTGGGTGAAGTTTGTCGTATAATC--GAA-AT--G--GATCAGC---T--A--------------------------------AAAGTTGTACATAAAAATGCTTGCC-AA-ATTTTCATAGCTCTGCTTTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads

Generated: 10/20/2015 at 11:25 PM