ID:

dya-mir-308

 Coordinate:

2R:10041147-10041209 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.4 -29.7 -29.7

Flybase annnotation

intron [Dyak\GE12328-in]; pre_miRNA [Dyak\mir-308-RM]; utr3 [utr3_minus_3068]; miRNA [Dyak\miR-308-RA]

No Repeatable elements found

Sense Strand Reads

TGCTTTGCCCGCCATCCGGATGAGATGGGGGGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCCTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTGCCAGCAGCAGAAAGTGACTGACAAGATCTGTATTATAA

*************************************((((.((...((.(((((((((((.(((((((.((((...............)))).))))))).))))))))))).))...))))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total M043

female body

 M056

embryo

 V046

embryo

 V120

male body		 V058

head

 M026

head

 V052

head

 GSM1528802

follicle cells		 SRR1275488

Male larvae
...........................................................................................AATCACAGGATTATACTGTGA................................................... 21 0 1 2843.00 2843 1699 921 95 6 47 8 25 42 0
....................................................CGCAGTATATTTTTGTGTTTTG......................................................................................... 22 0 1 1564.00 1564 348 47 515 314 195 34 111 0 0
...........................................................................................AATCACAGGATTATACTGT..................................................... 19 0 1 398.00 398 75 36 10 47 50 151 29 0 0
...........................................................................................AATCACAGGATTATACTGTGAG.................................................. 22 0 1 158.00 158 103 23 8 0 1 0 0 23 0
...........................................................................................AATCACAGGATTATACTGTG.................................................... 20 0 1 111.00 111 107 2 0 0 1 1 0 0 0
............................................................................................ATCACAGGATTATACTGTGA................................................... 20 0 1 91.00 91 91 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTT.......................................................................................... 21 0 1 87.00 87 29 2 33 7 9 0 7 0 0
...........................................................................................AATCACAGGATTATACTG...................................................... 18 0 1 79.00 79 0 11 1 0 2 63 1 0 1
....................................................CGCAGTATATTTTTGTGTTTTT......................................................................................... 22 1 1 60.00 60 1 1 13 0 12 0 33 0 0
.....................................................GCAGTATATTTTTGTGTTTTG......................................................................................... 21 0 1 48.00 48 36 0 5 2 2 0 3 0 0
...........................................................................................AATCACAGGATTATACTGC..................................................... 19 1 1 46.00 46 0 14 1 0 2 28 1 0 0
...........................................................................................AACCACAGGATTATACTGTGA................................................... 21 1 1 34.00 34 1 33 0 0 0 0 0 0 0
...........................................................................................AATTACAGGATTATACTGTGA................................................... 21 1 1 30.00 30 0 30 0 0 0 0 0 0 0
...........................................................................................AATCACAGAATTATACTGTGA................................................... 21 1 1 28.00 28 27 1 0 0 0 0 0 0 0
...........................................................................................AGTCACAGGATTATACTGTGA................................................... 21 1 1 25.00 25 0 25 0 0 0 0 0 0 0
....................................................CTCAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 17.00 17 0 17 0 0 0 0 0 0 0
...........................................................................................AATCACAGTATTATACTGTGA................................................... 21 1 1 15.00 15 15 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGG..................................................... 19 1 1 14.00 14 0 0 0 0 0 14 0 0 0
..........................................................................................CAATCACAGGATTATACTGTGA................................................... 22 1 1 14.00 14 6 8 0 0 0 0 0 0 0
....................................................CGCAGGATATTTTTGTGTTTTG......................................................................................... 22 1 1 12.00 12 0 1 0 1 9 0 1 0 0
....................................................CGCAGTATCTTTTTGTGTTTTG......................................................................................... 22 1 1 11.00 11 2 0 1 2 4 2 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGT................................................. 23 1 1 11.00 11 5 4 2 0 0 0 0 0 0
...........................................................................................AATCACAGCATTATACTGTGA................................................... 21 1 1 11.00 11 11 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTT............................................................................................ 19 0 1 11.00 11 4 1 5 1 0 0 0 0 0
....................................................CGCAGTATGTTTTTGTGTTTTG......................................................................................... 22 1 2 11.00 22 21 0 1 0 0 0 0 0 0
..........................................................................................AAATCACAGGATTATACTGTGA................................................... 22 0 1 8.00 8 5 3 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTTTTTTG......................................................................................... 22 1 1 7.00 7 0 0 0 0 6 0 1 0 0
...........................................................................................AATCACAGGATTCTACTGTGA................................................... 21 1 1 7.00 7 0 6 1 0 0 0 0 0 0
...........................................................................................ATTCACAGGATTATACTGTGA................................................... 21 1 1 7.00 7 0 7 0 0 0 0 0 0 0
.............................................................................................TCACAGGATTATACTGTGA................................................... 19 0 1 6.00 6 6 0 0 0 0 0 0 0 0
............................................................................................ATCACAGGATTATACTGTGAGA................................................. 22 0 1 6.00 6 6 0 0 0 0 0 0 0 0
.......................................................AGTATATTTTTGTGTTTTG......................................................................................... 19 0 1 6.00 6 5 0 0 1 0 0 0 0 0
....................................................CGAAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 6.00 6 0 2 3 0 1 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGG................................................... 21 1 1 6.00 6 1 3 0 0 0 2 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTGT........................................................................................ 23 0 1 6.00 6 2 2 0 1 0 0 1 0 0
..............................................................................................CACAGGATTATACTGTGAG.................................................. 19 0 1 6.00 6 6 0 0 0 0 0 0 0 0
...........................................................................................GATCACAGGATTATACTGTGA................................................... 21 1 1 6.00 6 3 2 0 1 0 0 0 0 0
............................................................................................ATCACAGGATTATACTGTGAGT................................................. 22 1 1 5.00 5 4 1 0 0 0 0 0 0 0
....................................................CCCAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 5.00 5 0 0 0 4 0 0 1 0 0
....................................................CGCAGTATTTTTTTGTGTTTTG......................................................................................... 22 1 1 5.00 5 3 0 0 1 1 0 0 0 0
....................................................CGCAGTATATTTTTGTGTGTTG......................................................................................... 22 1 1 5.00 5 0 0 2 0 1 0 2 0 0
...........................................................................................AATCACAGGATTATACTGTGAA.................................................. 22 1 1 5.00 5 4 1 0 0 0 0 0 0 0
............................................................................................ATCACAGGATTATACTGTGAG.................................................. 21 0 1 5.00 5 5 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTGA........................................................................................ 23 1 1 5.00 5 1 1 2 0 0 0 1 0 0
...........................................................................................TATCACAGGATTATACTGTGA................................................... 21 1 1 5.00 5 2 3 0 0 0 0 0 0 0
......................................................CAGTATATTTTTGTGTTTTG......................................................................................... 20 0 1 4.00 4 1 2 1 0 0 0 0 0 0
....................................................CGCAGCATATTTTTGTGTTTTG......................................................................................... 22 1 1 4.00 4 0 0 2 0 1 0 1 0 0
...........................................................................................AATCACAGGATTATACTGAG.................................................... 20 1 1 4.00 4 0 4 0 0 0 0 0 0 0
....................................................CGCCGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 4.00 4 0 0 2 0 2 0 0 0 0
....................................................CGCAGTATATTTTTGTGGTTTG......................................................................................... 22 1 1 4.00 4 0 1 1 2 0 0 0 0 0
........................................................................................ATCAATCACAGGATTATACTGTGA................................................... 24 3 1 4.00 4 1 3 0 0 0 0 0 0 0
............................................................................................ATCACAGGATTATACTGTG.................................................... 19 0 1 4.00 4 4 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAC.................................................. 22 1 1 4.00 4 1 3 0 0 0 0 0 0 0
...........................................................................................AATCACAGGTTTATACTGT..................................................... 19 1 1 3.00 3 0 0 0 0 3 0 0 0 0
....................................................CGCAGTATATTTTTGTGCTTTG......................................................................................... 22 1 1 3.00 3 0 0 0 0 2 0 1 0 0
....................................................TGCAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 3.00 3 0 2 1 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTT........................................................................................... 20 0 1 3.00 3 1 0 0 0 0 0 2 0 0
...............................................................................................ACAGGATTATACTGTGAG.................................................. 18 0 1 3.00 3 1 1 0 0 0 0 1 0 0
....................................................CGCTGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 3.00 3 0 1 2 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGGGTTTTG......................................................................................... 22 1 1 3.00 3 1 0 1 1 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTTTGAG.................................................. 22 1 1 3.00 3 0 3 0 0 0 0 0 0 0
....................................................AGCAGGATATTTTTGTGTTTTG......................................................................................... 22 2 1 3.00 3 0 0 2 0 1 0 0 0 0
............................................................................................ATCACAGGATTATACTGT..................................................... 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGCGA................................................... 21 1 1 3.00 3 1 2 0 0 0 0 0 0 0
...........................................................................................AATCACAGCATTATACTGTG.................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATATTGTGA................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0
...........................................................................................AATTACAGGATTATACTGT..................................................... 19 1 1 2.00 2 0 1 0 1 0 0 0 0 0
....................................................CGCAGGATATTTTTGTGTGTTG......................................................................................... 22 2 1 2.00 2 0 0 1 0 1 0 0 0 0
...........................................................................................AATCACACGATTATACTGTGA................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0
....................................................CGCGGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 2.00 2 0 0 1 0 1 0 0 0 0
....................................................CGCAGTATATTTTTTTGTTTTG......................................................................................... 22 1 1 2.00 2 0 0 0 0 2 0 0 0 0
...........................................................................................AATCACAGGATTATACTGA..................................................... 19 1 1 2.00 2 1 1 0 0 0 0 0 0 0
............................................................................................ATCACAGGGTTATACTGTGA................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0
....................................................TGGAGTATATTTTTGTGTTTTG......................................................................................... 22 2 1 2.00 2 0 1 1 0 0 0 0 0 0
.....................................................GCAGTATATTTTTGTGTTTT.......................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTA.................................................... 20 1 1 2.00 2 0 0 0 0 0 2 0 0 0
...........................................................................................AATTACAGGATTATACTGTGAG.................................................. 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0
....................................................GGCAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 2.00 2 1 0 0 0 0 0 1 0 0
...........................................................................................AATCACGGGATTATACTGTGA................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATGCTGTGA................................................... 21 1 1 2.00 2 1 0 1 0 0 0 0 0 0
...................................................TCGCAGTATATTTTTGTGTTTTG......................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................AATCGCAGGATTATACTGT..................................................... 19 1 1 2.00 2 0 0 0 0 0 2 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTA......................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0
..........................................................................................TAATCACAGGATTATACTGTGA................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0
....................................................CGCAGTATATCTTTGTGTTTTG......................................................................................... 22 1 1 2.00 2 0 0 1 0 0 0 1 0 0
..........................................................................TTTCCTTTTGCAACTCAAA...................................................................... 19 0 1 2.00 2 1 1 0 0 0 0 0 0 0
.............................................................................................TCACAGGATTATACTGTGAG.................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGC................................................. 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTTTGA................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGA................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...................................................ACGCAGTATATTTTTGTGTTTTG......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATGCTGT..................................................... 19 1 1 2.00 2 0 0 0 0 2 0 0 0 0
....................................................CGCCGTATATTTTTGTGTTTTT......................................................................................... 22 2 1 2.00 2 0 0 1 0 0 0 1 0 0
...................................................CCGCAGTATATTTTTGTGTTTTG......................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0 0 0 0
...........................................................................................AATCACGGGATTATACTGTG.................................................... 20 1 1 2.00 2 1 0 0 0 0 0 1 0 0
...........................................................................................GATCACAGGATTATACTGT..................................................... 19 1 1 2.00 2 1 0 0 0 0 0 1 0 0
....................................................CGCAGTATATTTTTGAGTTTTT......................................................................................... 22 2 1 2.00 2 0 0 1 0 1 0 0 0 0
...................................................TCGCAGTATATTTTTGTGTTTT.......................................................................................... 22 0 1 2.00 2 1 0 1 0 0 0 0 0 0
....................................................CGCAGGATATTTTTGTGTTTT.......................................................................................... 21 1 1 2.00 2 0 0 1 0 1 0 0 0 0
....................................................CGCAGTGTATTTTTGTGTTTTG......................................................................................... 22 1 2 1.50 3 0 1 2 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTTT................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................................................................ATCACACGATTATACTGTGA................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CGCAGTCTATTTTTGCGTTTTA......................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 1 0 0
...........................................................................................AATCACAGGATCATACTGTGA................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATAACAGGTTTATACTGTGA................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTATTGTG......................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................TGCCAGCAGCAGAAAGTGACT................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...........................................................................................AATCACAGGATTATACTGGGA................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................ACAATCACAGGATTATACTGTGAG.................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CGCAGGATATTTTTGTTTTTTG......................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTCTATTTTTGTGGTTTG......................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTGAA....................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGATT................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCGCAGGATTATACTGTGA................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGTATTATACTGTGAA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................ACTCACAGGATTATACTGTGA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0
....................................................CGCAGTAGATTTTTGTGTTTTG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCTCAGGATTATACTGTGAGA................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACGGTGA................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................CAATCACAGGATTATACTGA..................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTAGACTTTGAG.................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 1 0
...........................................................................................AATCACAGGACTATACTGTGA................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCTCAGGATTATACTGTGG................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACAGGATTTTACTGTGA................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AACTACAGGATTATACTGTGA................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................CAATCACAGGATTATACTGT..................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................ATAATCACAGGATTATACTGTGA................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AGTCACAGGATTCTACTGTGA................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCCCAGGATTATACTGT..................................................... 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTGTTTCCT................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACATTGA................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................................................................ATCACAGGATTATACTGTGAGG................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................ACAATCACAGGATTATACTGTGA................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTTA................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................ACTCACAGGATTATACTGTGAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTTTGAGTA................................................ 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGCGTATTG......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCACAAGATTATACTGTGAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0
....................................................CGCAGTATATTTTTGTGTTCTG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................TGCAACTCAAATCACAGGATTATACTG...................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AACCATAGGATTATACTGTGA................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................CTAATCACAGGATTATACTGTGA................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................AAATCACAGGATTATACTG...................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGTATTGTACTGTGA................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AACCACAGGATTATACTGTGAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................ATCACAGGTTTATACTGTGA................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................TGTCACAGGATTATACTGTGA................................................... 21 2 1 1.00 1 0 0 0 0 0 0 1 0 0
.................................................................................TTGCAACTCAAATCACAGGATTATAC........................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATTACAGGATTATACTG...................................................... 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................AAATCACAGGATTGTACTGTGAG.................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0
...........................................................................................AACCACAGGATTATACTGTGAGT................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCACGGGATTATACTGTGAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................ACATCAATCACAGGATTATACTGT..................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................CAGGATTATACTGTGAGA................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGCTTATACTGTGA................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTATATTTTTGTATTTTG......................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTCAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................CGGAGTATATTTTTGTATTTTG......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGAGTTTTG......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................CGCAGGATATTTTTGTGTTTTT......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................CGCCGTATATTTTTGTGTTTT.......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTCTTTTG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................TCAATCACAGGATTATACTGTGA................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................CGCGGTATATTTTTGTGTTTT.......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCATAGGATTATACTGTGA................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................CGCCGTCTATTTTTGTGTTTTG......................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0
..........................................................................................GAATCACAGGATTATACTGTGA................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................AGCACAGGATTATACTGTGAGT................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGGGAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGGGTTATACTGTGT................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0
..............................GGAATCACACGTCTCGACGCCT............................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................ATCACAGGATTATACTGTGAT.................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CTCAGTATATTTTTGTGTTTTGA........................................................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCAAAGGATTATACTGTGAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0
...........................................................................................AAGCACAGGGTTATACTGGGA................................................... 21 3 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACAGGATCATACTGT..................................................... 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................CGCAGTATATTTTTGTTTTTTT......................................................................................... 22 2 3 1.00 3 0 0 0 0 0 0 3 0 0
....................................................CGTAGTATATTTTTGTGTTTT.......................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACAGGATTGTACTGT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AGTCACAGGATTATACTGCGA................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGCATTATACTGTGAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGAGT................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................CACAGGATTATACTGTGA................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACATGATTATACTGT..................................................... 19 1 1 1.00 1 0 0 0 0 0 0 1 0 0
....................................................CGAAGTATATTTTTGTGTTTT.......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................CAATCACATGATTATACTGTGA................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CGCACTATATTTTTGTGTTTTG......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.............................................................................................TCACAGGACTATACTGTGAGT................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATCCTGTG.................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATTACAGGATTATACTGTGAC.................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................CGCTGTATATTTTTGCGTTTTG......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................CATCCAATCACAGGATTATACTGTGA................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CGGAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATAACAGGATTATACTGTGA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0
...........................................................................................AATCACAGGATTATACTCTGAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................AGCAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCACAGGACTATACTGT..................................................... 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0
........................................................GTATATTTTTGTGTTTTG......................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................ATGGGGGGAATCACACGTCTCGACGCCT............................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................GCAGTATATTTTTGTGTTTTC......................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................AATCACAGGGTTATACTG...................................................... 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATTACAGGATTATACTGGGAG.................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................TGCAGTATATTTTTGTGTTTT.......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................ATCACAGGGTTATACTGTGAGA................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................TATCACAGGATTATACTGC..................................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................CGCAGGAGATTTTTGTGTTTTG......................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACAGGATTATTCTGTGA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGT................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0
....................................................CGCAGTATATTTTTGTGTTTGG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................CAATCACAGGATTATACTGGGA................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................CGCAGTATATTCTTGTGTTTTG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCACCGGCTTATACTGT..................................................... 19 2 1 1.00 1 0 0 0 0 0 0 1 0 0
..........................................................................................CAATCACAGGGTTATACTGTGA................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................ATCACAGGATTATACTGTGAA.................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................ATTCACAGGATTATACTGTGAGT................................................. 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATCGCAGGATTATACTGTGAGT................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTAAACTGTGA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0
.....................................................GCAGTATATTTTTGTGTT............................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................GGAATCACAGGATTATACTGTGA................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGAGA................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................TATCACAGGATTATACTGTGAGT................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATTACAGGATTAAACTGTGA................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTAGACTGCGA................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 1 0
...........................................................................................AATCACAAGATTATACTGTG.................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CGCAGTATACTTTTGTGTTTTG......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0
....................................................CGCATTATATTTTTGTGTTTTT......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 1 0 0
....................................................CGCAGTCTATTTTTGTGTTTTG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGCGAGT................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATTACAGGTTTATACTGTGA................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTACACTAT..................................................... 19 2 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAT.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................ATTCACAGGATTATACTGT..................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTGTG......................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACAGGATTAGACTGTGA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0
...........................................................................................CATCACAGGATTATACTGTGA................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGGCTTATACTGT..................................................... 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACAGGATTATACTCTGA................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0
.....................................................GCAGTATAGTTTTGTGTTTTG......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CGCAGCATATTTTTGTGTTTT.......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGAT................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................GGGGGAATCACACGTCTCGACGCCT............................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................GAATCACACGTCTCGACGCCT............................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGACA................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CGCTGTATATTTGTGTGTTTTG......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCACATGATTATACTGTGA................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................GGGGGGAATCACACGTCTCGACGCCT............................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................GCAGTATACTTTTGTGTTTTG......................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0
....................................................CGCAGTAGATTTTTGCGTTTTG......................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATGACTGGATTATACTGTGA................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTATATTTTAGTTTTTTG......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 1 0 0
....................................................CGCAGTATATTTTTGTGTCTTT......................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTAA........................................................................................ 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCAGAGGATTATACTGTGA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTGC........................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTCCTTTC......................................................................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTATATTTTTATGTTTTG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTC......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTCGTGTTTTG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................CGCAGTATGTTTTTGTGGTTTG......................................................................................... 22 2 2 0.50 1 0 0 0 0 0 0 1 0 0
...........................................................................................AATCACAGGATGATACTGG..................................................... 19 2 2 0.50 1 0 0 0 0 1 0 0 0 0
....................................................CTAAGTATATTTTTGTGTTTTG......................................................................................... 22 2 2 0.50 1 0 0 1 0 0 0 0 0 0
....................................................CGCAGTATTTTTTTGTGTTTTT......................................................................................... 22 2 4 0.50 2 0 0 1 0 0 0 1 0 0
....................................................CGCAGTATCTTTTTGTGTTTTA......................................................................................... 22 2 2 0.50 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTATCTTTTTGTGTTTTC......................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTTGA.................................................... 20 3 6 0.50 3 0 3 0 0 0 0 0 0 0
...................................................TCGCAGTATGTTTTTGTGTTTTG......................................................................................... 23 1 2 0.50 1 0 0 1 0 0 0 0 0 0
..........................................................................TTTCCTTTTGCAACTCAAG...................................................................... 19 1 2 0.50 1 0 1 0 0 0 0 0 0 0
....................................................CGCAGGGTATTTTTGTGTTTTG......................................................................................... 22 2 2 0.50 1 0 0 1 0 0 0 0 0 0
....................................................CGCAGTATGTTTTTGTGTTTTT......................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTTTACTGTC.................................................... 20 2 2 0.50 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTATGTTTTTGTGTTTTGA........................................................................................ 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0
....................................................TGCCGTATATTTTTGTGTTTTG......................................................................................... 22 2 2 0.50 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTGTAATTTTGTGTTTAG......................................................................................... 22 3 3 0.33 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATTACAGGATTATACTGC..................................................... 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0
....................................................CTCTGTATATTTTTGTGTTTTG......................................................................................... 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0
....................................................TGCAGTATCTTTTTGTGTTTTG......................................................................................... 22 2 3 0.33 1 0 0 0 1 0 0 0 0 0
....................................................CGACGGATATTTTTGTGTTTTG......................................................................................... 22 3 4 0.25 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGCATATGTTTGTGGTTTG......................................................................................... 22 3 4 0.25 1 0 0 0 0 1 0 0 0 0
....................................................CTGAGTATATTTTTGTGTTTT.......................................................................................... 21 2 4 0.25 1 0 1 0 0 0 0 0 0 0
....................................................CGCAGCATATTTTTGTGTTTCT......................................................................................... 22 3 4 0.25 1 0 0 0 0 1 0 0 0 0
....................................................CGGAGTGTATTTTTGTGTTTTG......................................................................................... 22 2 4 0.25 1 0 0 1 0 0 0 0 0 0
....................................................CACAGTATTTTTTCGTGTTTTG......................................................................................... 22 3 4 0.25 1 0 0 1 0 0 0 0 0 0
...........................................................................................AATCACAGTCTTCTACTGTGA................................................... 21 3 6 0.17 1 0 0 0 0 1 0 0 0 0
....................................................CGCTGCATACTTTTGTGTTTTG......................................................................................... 22 3 6 0.17 1 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACAGGATTATGCTGC..................................................... 19 2 6 0.17 1 0 0 0 0 0 1 0 0 0
...........................................................................................AATCACAGGGTTTTACTGTGT................................................... 21 3 7 0.14 1 0 0 0 0 1 0 0 0 0
....................................................CGGAGTGTATTTTTGTGTTGTG......................................................................................... 22 3 7 0.14 1 0 0 0 0 1 0 0 0 0
....................................................CGCCGGATTTTTTTGTGTTTTG......................................................................................... 22 3 8 0.13 1 0 0 0 0 1 0 0 0 0
....................................................TACAGTATATTTTTCTGTTTTG......................................................................................... 22 3 9 0.11 1 0 0 1 0 0 0 0 0 0
....................................................CGCGGTTGATTTTTGTGTTTTG......................................................................................... 22 3 9 0.11 1 0 0 0 0 1 0 0 0 0
...........................................................................................AAGCACAGGGTTCTACTGT..................................................... 19 3 10 0.10 1 0 0 0 0 1 0 0 0 0
....................................................CGCAGTTTATTTTTGTGTTTGT......................................................................................... 22 3 11 0.09 1 0 0 0 0 1 0 0 0 0
....................................................TTCAGCATATTTTTGTGTTTTG......................................................................................... 22 3 12 0.08 1 0 0 0 0 1 0 0 0 0
....................................................CGCGGTATTTTTGTGTGTTTTG......................................................................................... 22 3 15 0.07 1 0 0 1 0 0 0 0 0 0
....................................................CGCAGTATATTTGTGTTTTG........................................................................................... 20 3 20 0.05 1 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

ACGAAACGGGCGGTAGGCCTACTCTACCCCCCTTAGTGTGCAGAGCTGCGGAGCGTCATATAAAAACACAAAACAAAGGAAAACGTTGAGTTTAGTGTCCTAATATGACACTCTACTGGTCGCACGGTCGTCGTCTTTCACTGACTGTTCTAGACATAATATT

************************************((((.((...((.(((((((((((.(((((((.((((...............)))).))))))).))))))))))).))...))))))..************************************* 		Read size # Mismatch Hit Count Total Norm Total V120

male body		 M056

embryo
......CGGGCGGTAGGCCTACTCTAC........................................................................................................................................ 21 0 1 1.00 1 1 0
...................................................................................................................................CGACCTTCACTGACTGTGCTA........... 21 3 4 0.25 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droYak3 2R:10041097-10041259 - dya-mir-308 Known_mirbase TGC-------------TTTGCC----------------------------------CGCCATCCGGATGAGA---TGGGG----GGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCCT-TTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGT----GC---CAGC---------AGCAGA------AAGTGACTGACA-AG------ATCTG---------------------TATTATAA
droEre2 scaffold_4845:15739200-15739365 + der-mir-308 Known_mirbase TGC-------------TTTGCC----------------------------------CGCCGTCCGGATGATA---TGGGG----GGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGT-TTTGCAAATCAAATCACAGGATTATACTGTGAGATGACCAGCGT----GCCGCCAGC---------AGCAGA------AAGTGACTGACC-AG------ATTTG---------------------TATTATAT
droSec2 scaffold_1:7611653-7611801 - dse-mir-308 Known_mirbase TGG-------------TGGGG--------------------------------------GATGGT-----------GGGG----GGAA--TCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGT-TTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGT----GC---CAGC---------AGCAAA------AAGCGAATGATA-TT------ATATC---------------------AATTATAT
droSim2 2r:10806875-10807023 - dsi-mir-308 Known_mirbase TGG-------------TGGG----------------------------------------ATGGT-----------GGGG----GGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGT-TTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGT----GC---CAGC---------AGCAGA------AAGCGAATGATA-TG------ATATC---------------------AATAATAT
dm3 chr2R:10103257-10103422 - dme-mir-308 Known_mirbase TGC-------------TATGCC----------------------------------CGCCATCCGGATGAGATGGCGGGG----TTAATAACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGT-TTTGCAATCCAAATCACAGGATTATACTGTGAGATGACCAGCGT----GC---CAGC---------AGCGAA------AAGCGACTGATA-TG------ATATC---------------------AATTATAT
droEug1 scf7180000409462:2740180-2740331 + TGT-------------TTTTTC----------------------------------TCCAACCCA-----------GAAG----TG-ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTT-AT-TTTGTAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGT----GC---CAGC---------AGCGAA------TAATGAATAAAA-AG-------TGTA---------------------AATTATTC
droBia1 scf7180000301506:3161422-3161573 + TGT-------------TATGCC----------------------------------CCCCATCCAGA---------GAAG----AG-AACCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTAG-GC-TTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGT----GC---CAGC---------AGCAGA------AAGGGATTGAAG-CG-------------------------TATT---TAT--TAA
droTak1 scf7180000414111:5696-5842 - TGC-------------TTCC--------------------------------------------------------GAAGTCATCG-ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTG-GT-TCTGAAACTCAAATCACAGGATTATACTGTGAGCTGACCAGCGT----GC---CAGC---------AGCAAG------AAGTTTATAGGATGG------ATTTG---------------------AATTATAT
droEle1 scf7180000491349:772086-772234 + TGT-------------TTGCC---------------------------------------ATCCC-----------GGAG----AG-ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTT-GT-TTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGT----GC---CAGC---------AGCCAA------GAGTGAATGGAACTG------GTTTG---------------------AGCAACAT
droRho1 scf7180000777200:420716-420858 - TGT-------------GTTCC---------------------------------------GTTCT-----------GGAG----AG-ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTC-GT-TTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGT----GC---CAGC---------AGCGAA------GAGTTTATGAAA------------TT---------------------GGTTCTAG
droFic1 scf7180000453948:328418-328567 + TGT-------------TATCCA-------------------------------------CATCCC-----------GAAG----AG-AACCCACGTCTCGACGACTCGCAGTATATTTTTGTGTTTTGTTG-GT-TTTGGAACTCAAATCACAGGATTATACTGTGAGCTGACAAGCGT----GC---CAGC---------AACCAA------AGAAATCTAAAA-CG------GTTTGG--------------------AAT-TAAA
droKik1 scf7180000302385:233907-234052 - TGC-------------TTCCTC---------------------------------------TCC------------GA------AG-AACCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTG-TGTTTGAAAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGT----GC---CAGC---------AACAGC------AGCAGCATAATT-AG------CCTTT---------------------AATTATAG
droAna3 scaffold_13266:5819944-5820084 + dan-mir-308 Known_mirbase CAC-------------TCTACC----------------------------------A--------------------------------TCCATGTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTT-GG-TTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGT----GT---CAGC---------AGCTGA------AACAGTGCA-----------------TAATTAAAGAAT-------CCTATTTGCC
droBip1 scf7180000396372:434900-435065 + GAACTAAACAAGGTGATATCAC----------------------------------TCCTAC--------------------------ATCCATGTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTT-GT-TTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGT----GT---CAGC---------AGCCGA------ATATCAGCAATT-CAATATCTAATAT-AT----------------CTAATTATAC
dp5 3:16336949-16337108 - dps-mir-308 Known_mirbase TGT-------------TTTCCT----------------------------------AGGTGTGCC-----------G-AA----AG-AAGCGGCGTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTG-TG-TCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGT----GC---TATC---------AAGAGAGTGTGAACGGAACCCA------------------------AG--TGTATTTTGTATTTCAT
droPer2 scaffold_4:426229-426387 + dpe-mir-308 Known_mirbase TGT-------------TTTCCT----------------------------------AGGTGTGCC-----------G-AA----AG-AATCGGCGTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTG-TG-TCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGT----GC---TATC---------AGAGAG-TGTGAAAGGAACCCA------------------------AG--TGTATTTTGTATTTCAT
droWil2 scf2_1100000004513:1860914-1861069 + dwi-mir-308 Known_mirbase GCT-------------CTCGTC----------------------------------GACCA------------------C----AG-A---CTATTCTTG-CGTCTCGCAGTATATTTTTGTGTTTTGTTC-AATTTGTCAACTCAAATCACAGGATTATACTGTGAGCTGCGAAATGGAAATCC---ACGC---------AACCA-----------TTTTAAAA------TCAAATTG-ACTTA--AA--TGTCTT---CTCCATAC
droVir3 scaffold_12875:17605281-17605422 + dvi-mir-308 Known_mirbase TAA-------------TTTGTA----------------------------------GCCAA------------------------------CGCA-TTCGATGTCTCGCAGTATACTTTTGTGTTTTGTTT-AT-TTTGAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGT----AG---CAAC---------AACAAA------AATCCATTT-----------------TAGACACAAAGC-------TTTATATGAG
droMoj3 scaffold_6496:11229037-11229167 + dmo-mir-308 Known_mirbase GAT-------------TTTAAT----------------------------------T------T------------GAATTATTTG-A--ACACA-TTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTT-AT-TATAAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGA----AA---CAAC---------AACAAA-----------------------------TTG---------------------AATTAAAA
droGri2 scaffold_15245:14076216-14076371 - dgr-mir-308 Known_mirbase TGT-------------TTTCAATTTGATATACATATATAGATAGATCTGTTAAGCCCAC--------------------------------CAC-TGTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTTATT-TTTGAAAATCAAATCACAGGATTATACTGTGAGTTATC----------GC---CAGCAGCAAGGACAACCAA---------------------------ATTTT---------------------AAT----T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TGC-------------TTTGCC----------------------------------CGCCATCCGGATGAGA---TGGGG----GGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCCT-TTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGT----GC---CAGC---------AGCAGA------AAGTGACTGACA-AG------ATCTG---------------------TATTATAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................2112843.00284381699921952547600042
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................2211564.00156434348475151111953140000
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................191398.003981517536102950470000
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................221158.00158010323801000023
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................201111.001111107200100000
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................20191.0091091000000000
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................21187.00870292337970000
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................18179.00796301111201000
..........................................................................................................CGCAGTATATTTTTGTGTTTTT............................................................................................................................................22160.006001113331200000
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................21148.0048036053220000
..................................................................................................................................................AATCACAGGATTATACTGC.......................................................................................................19146.00462801411200000
..................................................................................................................................................AATCACAGGATTATACTGG.......................................................................................................19114.0014140000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................23111.001105420000000
..........................................................................................................CGCAGTATATTTTTGTGTT...............................................................................................................................................19111.001104150010000
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................2218.00805300000000
....................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................................................1916.00606000000000
...................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................................................2216.00606000000000
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................1916.00605000010000
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................2116.00621300000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGT...........................................................................................................................................2316.00602201010000
.....................................................................................................................................................CACAGGATTATACTGTGAG....................................................................................................1916.00606000000000
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................2215.00504100000000
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................2215.00504100000000
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................2115.00505000000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGA...........................................................................................................................................2315.00501121000000
............................................................................................................CAGTATATTTTTGTGTTTTG............................................................................................................................................2014.00401210000000
...................................................................................................................................................ATCACAGGATTATACTGTG......................................................................................................1914.00404000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................................................2214.00401300000000
..........................................................................................................CGCAGTATATTTTTGTGTTT..............................................................................................................................................2013.00301002000000
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................1813.00301101000000
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................1813.00303000000000
..................................................................................................................................................AATCACAGGATTATACTGA.......................................................................................................1912.00201100000000
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................2012.00202000000000
..................................................................................................................................................AATCACAGGATTATACTGTA......................................................................................................2012.00220000000000
.........................................................................................................TCGCAGTATATTTTTGTGTTTTG............................................................................................................................................2312.00202000000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTA............................................................................................................................................2212.00201010000000
................................................................................................................................TTTCCT-TTTGCAACTCAAA........................................................................................................................1912.00201100000000
....................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................................................2012.00202000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................................................2312.00200200000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................................................2312.00202000000000
.........................................................................................................TCGCAGTATATTTTTGTGTTTT.............................................................................................................................................2212.00201010000000
..................................................................................................................................................AATCACAGGATTATACTGTTT.....................................................................................................2111.00100000100000
..................................................................................................................................................................................T----GC---CAGC---------AGCAGA------AAGTGACT...............................................2111.00110000000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGAA..........................................................................................................................................2411.00100010000000
..................................................................................................................................................AATCACAGGATTATACTGTGATT...................................................................................................2311.00101000000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTTTCCT-.....................................................................................................................................2811.00101000000000
...................................................................................................................................................ATCACAGGATTATACTGTGAGG...................................................................................................2211.00101000000000
.........................................................................................................................................TGCAACTCAAATCACAGGATTATACTG........................................................................................................2711.00101000000000
.................................................................................................................................................AAATCACAGGATTATACTG........................................................................................................1911.00101000000000
........................................................................................................................................TTGCAACTCAAATCACAGGATTATAC..........................................................................................................2611.00101000000000
.......................................................................................................................................................CAGGATTATACTGTGAGA...................................................................................................1811.00101000000000
....................................................................................GGAATCACACGTCTCGACGCCT..................................................................................................................................................................2211.00101000000000
...................................................................................................................................................ATCACAGGATTATACTGTGAT....................................................................................................2111.00101000000000
.....................................................................................................................................................CACAGGATTATACTGTGA.....................................................................................................1811.00101000000000
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................1811.00101000000000
.......................................................................A---TGGGG----GGAATCACACGTCTCGACGCCT..................................................................................................................................................................2811.00100100000000
...........................................................................................................GCAGTATATTTTTGTGTTTTC............................................................................................................................................2111.00100000010000
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................2111.00100001000000
...................................................................................................................................................ATCACAGGATTATACTGTGAA....................................................................................................2111.00101000000000
...........................................................................................................GCAGTATATTTTTGTGTT...............................................................................................................................................1811.00101000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2211.00101000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGAT..................................................................................................2411.00100100000000
.............................................................................GGG----GGAATCACACGTCTCGACGCCT..................................................................................................................................................................2511.00100100000000
.....................................................................................GAATCACACGTCTCGACGCCT..................................................................................................................................................................2111.00101000000000
............................................................................GGGG----GGAATCACACGTCTCGACGCCT..................................................................................................................................................................2611.00100100000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTAA...........................................................................................................................................2311.00100010000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGC...........................................................................................................................................2311.00100100000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTC............................................................................................................................................2211.00101000000000
..................................................................................................................................................AATCACAGGATTATACTTGA......................................................................................................2060.50300300000000
................................................................................................................................TTTCCT-TTTGCAACTCAAG........................................................................................................................1920.50100100000000
droEre2
TGC-------------TTTGCC----------------------------------CGCCGTCCGGATGATA---TGGGG----GGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGT-TTTGCAAATCAAATCACAGGATTATACTGTGAGATGACCAGCGT----GCCGCCAGC---------AGCAGA------AAGTGACTGACC-AG------ATTTG---------------------TATTATATSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................2218615.0086159407586156185450639
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................2111217.0012176906246484030130
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................191506.005061351521261501590
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................211399.003998741715672090
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................211143.001439103024250
..........................................................................................................CGCAGTATATTTTTGTGTTTTT............................................................................................................................................221120.001204053490140
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................221115.001158210141413
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTT..........................................................................................................................................241105.0010540013691
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................20183.0083540402221
..........................................................................................................CGCAGTATATTTTTGTGTTT..............................................................................................................................................20167.00671213214350
..........................................................................................................CGCAGTATATTTTTGTGTTTTGT...........................................................................................................................................23154.005420208537
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................23142.004230012531
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................20135.003535000000
..........................................................................................................CGCAGTATATTTTTGTGTT...............................................................................................................................................19127.002720239110
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................19122.00229011650
..........................................................................................................CGCAGTATATTTTTGTGTTTTGA...........................................................................................................................................23121.00212020278
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................18119.001952000120
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTTT.........................................................................................................................................25114.001400000113
................................................................................................................................................CAAATCACAGGATTATACTGTGA.....................................................................................................23113.00137301020
............................................................................................................CAGTATATTTTTGTGTTTTG............................................................................................................................................20112.00125000250
..........................................................................................................CGCAGTATATTTTTGTGT................................................................................................................................................18111.00110000290
..................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................................................23111.001110000010
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................22111.001110000010
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................20110.00108010010
..................................................................................................................................................AATCACAGGATTATACTGA.......................................................................................................1919.0097000020
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................2118.0088000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTA............................................................................................................................................2218.0083000230
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................2217.0073001030
..........................................................................................................CGCAGTATATTTTTGTGTTG..............................................................................................................................................2017.0070000250
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................2117.0070000160
..........................................................................................................CGCAGTATATTTTTGTGTTTTTG...........................................................................................................................................2316.0060000150
...................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................................................2216.0065000010
..........................................................................................................CGCAGTATATTTTTGTGTTTG.............................................................................................................................................2116.0061000320
..................................................................................................................................................AATCACAGGATTATACTGC.......................................................................................................1916.0060510000
...................................................................................................................................................ATCACAGGATTATACTGTG......................................................................................................1916.0065000010
.........................................................................................................TCGCAGTATATTTTTGTGTTTTG............................................................................................................................................2316.0061010040
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................1815.0051000220
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................2214.0043100000
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2214.0044000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTC............................................................................................................................................2214.0042002000
................................................................................................................................................CAAATCACAGGATTATACTGTG......................................................................................................2214.0044000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGG...........................................................................................................................................2313.0032000010
....................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................................................1913.0033000000
....................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................................................2113.0033000000
......................................................................................AATCACACGTCTCGACGCCT..................................................................................................................................................................2013.0030100110
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................1813.0033000000
..................................................................................................................................................AATCACAGGATTATACTGTT......................................................................................................2013.0031000020
............................................................................................................CAGTATATTTTTGTGTTTTGTT..........................................................................................................................................2213.0032000100
..................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................................................2313.0030000003
.......................................................................................................................................................CAGGATTATACTGTGAG....................................................................................................1712.0020000002
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................1812.0021000010
...........................................................................................................GCAGTATATTTTTGTGTTT..............................................................................................................................................1912.0021000010
.....................................................................................GAATCACACGTCTCGACGCCT..................................................................................................................................................................2112.0021100000
...........................................................................................................GCAGTATATTTTTGTGTTTTT............................................................................................................................................2112.0020001010
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................2112.0021000010
...............................................................................G----GGAATCACACGTCTCGACGCCT..................................................................................................................................................................2311.0011000000
..................................................................................................................................................AATCACAGGATTATACTTGA......................................................................................................20101.00108000020
...........................................................................................................GCAGTATATTTTTGTGTTTTGC...........................................................................................................................................2211.0011000000
..................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................................................2211.0011000000
....................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................................................2011.0011000000
........................................................................................................................................................................ATGACCAGCGT----GCCGCCAGC---------AGC................................................................2311.0010000010
.......................................................................................ATCACACGTCTCGACGCCT..................................................................................................................................................................1911.0010000100
.................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................................................2111.0011000000
.................................................................................................................................................AAATCACAGGATTATACTGT.......................................................................................................2011.0010100000
................................................................................................................................................CAAATCACAGGATTATACTGT.......................................................................................................2111.0010000100
....................................................................................................................................................TCACAGGATTATACTGTGAGT...................................................................................................2111.0011000000
..............................................................................................................GTATATTTTTGTGTTTTGT...........................................................................................................................................1911.0010000100
...............................................................................................................................................TCAAATCACAGGATTATACTG........................................................................................................2111.0010010000
..................................................................................................................................................AATCACAGGATTATACTT........................................................................................................1811.0010000010
..................................................................................................................................................AATCACAGGATTATACTGTA......................................................................................................2011.0010000100
.....................................................................................................................................................CACAGGATTATACTGTGAG....................................................................................................1911.0010000010
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTTTC........................................................................................................................................2611.0010001000
...................................................................................................................................................ATCACAGGATTATACTGTGAA....................................................................................................2111.0011000000
..................................................................................................................................................AATCACAGGATTATACTGTTG.....................................................................................................2111.0011000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGC...........................................................................................................................................2311.0011000000
.............................................................................................................AGTATATTTTTGTGTTTT.............................................................................................................................................1811.0010000010
...................................................................................................................................................ATCACAGGATTATACTGTGTT....................................................................................................2111.0011000000
droSec2
TGG-------------TGGGG--------------------------------------GATGGT-----------GGGG----GGAA--TCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGT-TTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGT----GC---CAGC---------AGCAAA------AAGCGAATGATA-TT------ATATC---------------------AATTATATSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................22136133.0036133164311915299519580
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................211638.0063827225135206
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................191530.0053014318187182
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................211375.00375857151168
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................211334.003341347819103
..........................................................................................................CGCAGTATATTTTTGTGTTT..............................................................................................................................................201150.001509401091
..........................................................................................................CGCAGTATATTTTTGTGTT...............................................................................................................................................19171.0071633230
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................22163.0063461106
..........................................................................................................CGCAGTATATTTTTGTGTTTTGT...........................................................................................................................................23156.0056829415
..........................................................................................................CGCAGTATATTTTTGTGTTTG.............................................................................................................................................21144.0044281123
..........................................................................................................CGCAGTATATTTTTGTGTTTTGA...........................................................................................................................................23143.0043517813
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................20142.0042270114
..........................................................................................................CGCAGTATATTTTTGTGT................................................................................................................................................18129.002910523
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................18125.002530148
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................19122.002211533
............................................................................................................CAGTATATTTTTGTGTTTTG............................................................................................................................................20122.002211515
..........................................................................................................CGCAGTATATTTTTGTGTTTTT............................................................................................................................................22121.002154210
..........................................................................................................CGCAGTATATTTTTGTGTTG..............................................................................................................................................20121.002124312
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................20120.002020000
..........................................................................................................CGCAGTATATTTTTGTGTTTTA............................................................................................................................................22117.001705111
..........................................................................................................CGCAGTATATTTTTGTGTTTTTG...........................................................................................................................................23114.00143326
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................18112.001212000
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................23111.00110137
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................18111.00112225
..........................................................................................................CGCAGTATATTTTTGTGTTTTC............................................................................................................................................22110.00100406
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................20110.00107102
..................................................................................................................................................AATCACAGGATTATACTGA.......................................................................................................1919.0094113
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................2216.0063021
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................2216.0066000
....................................................................................GGAA--TCACGTCTCGACGCCT..................................................................................................................................................................2016.0066000
.........................................................................................................TCGCAGTATATTTTTGTGTTTTG............................................................................................................................................2315.0051013
...................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................................................2215.0055000
.......................................................................................................................................................CAGGATTATACTGTGAGA...................................................................................................1815.0053020
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................2114.0040103
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................1814.0042020
.....................................................................................................................................................CACAGGATTATACTGTGAG....................................................................................................1914.0043010
..................................................................................................................................................AATCACAGGATTATACTGTT......................................................................................................2013.0031002
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................2113.0032010
...........................................................................................................GCAGTATATTTTTGTGTTTTGA...........................................................................................................................................2212.0021001
.........................................................................................................TCGCAGTATATTTTTGTGTTTT.............................................................................................................................................2212.0021001
..........................................................................................................CGCAGTATATTTTTGTGTTTC.............................................................................................................................................2112.0021001
...........................................................................................................GCAGTATATTTTTGTGTTTTT............................................................................................................................................2112.0022000
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2212.0022000
................................................................................................................................TTTCGT-TTTGCAACTCAAA........................................................................................................................1912.0020020
..................................................................................................................................................AATCACAGGATTATACTT........................................................................................................1812.0020002
....................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................................................2112.0022000
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................2112.0022000
............................................................................GGGG----GGAA--TCACGTCTCGACGCCT..................................................................................................................................................................2412.0022000
...........................................................................................................GCAGTATATTTTTGTGTTT..............................................................................................................................................1912.0021001
................................................................T-----------GGGG----GGAA--TCACGTCTCGACGCCT..................................................................................................................................................................2512.0022000
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................2212.0021010
.........................................................................................................TCGCAGTATATTTTTGTGTTTTGTTTC........................................................................................................................................2711.0010100
..........................................................................................................CGCAGTATATTTTTGTGC................................................................................................................................................1811.0010001
...................................................................................................................................................ATCACAGGATTATACTGTGAGG...................................................................................................2211.0011000
..................................................................................................................................................AATCACAGGATTATACTGG.......................................................................................................1911.0011000
........................................................................................................................................................................ATGACCAGCGT----GC---CAGC---------AGCAA..............................................................2211.0011000
...........................................................................................................GCAGTATATTTTTGTGTT...............................................................................................................................................1811.0011000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTT..........................................................................................................................................2411.0010100
.......................................................................................................................................TTTGCAACTCAAATCACAGGAT...............................................................................................................2211.0011000
..........................................................................................................CGCAGTATATTTTTGTGTG...............................................................................................................................................1911.0010100
....................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................................................1911.0011000
...........................................................................................................GCAGTATATTTTTGTGTTTTTG...........................................................................................................................................2221.0022000
..................................................................................................................................................AATCACAGGATTATACTGTAGA....................................................................................................2211.0010010
..........................................................................................................CGCAGTATATTTTTGTGTTTTGG...........................................................................................................................................2311.0011000
..................................................................................................................................................AATCACAGGATTATACTGTGTT....................................................................................................2211.0010001
..........................................................................................................CGCAGTATATTTTTGTGTTTTTGA..........................................................................................................................................2411.0011000
..............................................................................GG----GGAA--TCACGTCTCGACGCCT..................................................................................................................................................................2211.0011000
..................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................................................2311.0011000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGC...........................................................................................................................................2311.0011000
..................................................................................................................................................AATCACAGGATTATACTGTA......................................................................................................2011.0010001
................................................................................................................................TTTCGT-TTTGCAACTCAAAA.......................................................................................................................2011.0011000
..................................................................................................................................................AATCACAGGATTATACTGC.......................................................................................................1911.0010010
...........................................................................................................GCAGTATATTTTTGTGTTG..............................................................................................................................................1911.0010010
..........................................................................................................CGCAGTATATTTTTGTGTTA..............................................................................................................................................2011.0010001
...............................................................................G----GGAA--TCACGTCTCGACGCCT..................................................................................................................................................................2111.0011000
......................................................................................................................................................ACAGGATTATACTGTGAGT...................................................................................................1911.0010001
..........................................................................................................CGCAGTATATTTTTGTGTC...............................................................................................................................................1911.0010100
............................................................................................................CAGTATATTTTTGTGTTT..............................................................................................................................................1811.0011000
................................................................................................................................................CAAATCACAGGATTATACTGTG......................................................................................................2211.0011000
............................................................................................................CAGTATATTTTTGTGTTTTGTTTC........................................................................................................................................2411.0010010
..................................................................................................................................................AATCACAGGATTATACTGTGAGG...................................................................................................2311.0010010
......................................................................................................................................................ACAGGATTATACTGTGAGC...................................................................................................1911.0011000
........................................................................................................................................TTGCAACTCAAATCACAGGATTATACTGT.......................................................................................................2911.0010100
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTTTC........................................................................................................................................2611.0010010
...................................................................................................................................................ATCACAGGATTATACTGTGAGC...................................................................................................2211.0011000
droSim2
TGG-------------TGGG----------------------------------------ATGGT-----------GGGG----GGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGT-TTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGT----GC---CAGC---------AGCAGA------AAGCGAATGATA-TG------ATATC---------------------AATAATATSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................2219252.009252514191202396127486214610558937038157321045001
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................2116064.00606483536253215765822451122374510700000
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................1812799.0027991005010015712706000000
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................1912483.0024831003341207244501318761800000
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................2211611.0016111011923138392204955922000
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................1811024.00102451411318519112123182100000
.......................................................................................................................................................CAGGATTATACTGTGAG....................................................................................................171733.00733000000331627684000000
..........................................................................................................CGCAGTATATTTTTGTGTTT..............................................................................................................................................201703.007034112316274002890500000
..........................................................................................................CGCAGTATATTTTTGTGTT...............................................................................................................................................191614.0061400002762291002105100000
..........................................................................................................CGCAGTATATTTTTGTGT................................................................................................................................................181558.005580000275217101062200000
..................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................................................231558.0055800020044252832004000000
........................................................................................................................................................AGGATTATACTGTGAG....................................................................................................161530.00530000000514417695164000000
..................................................................................................................................................AATCACAGGATTATACT.........................................................................................................171529.0052900000015956103346000000
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................211503.00503100245250242150431934050000
......................................................................................................................................................ACAGGATTATACTGTGA.....................................................................................................171448.00448000000121246387000000
......................................................................................................................................................ACAGGATTATACTGT.......................................................................................................151392.003920000000000392000000
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................182325.006500000200010646100000
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................231314.003140001001465294210000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGA...........................................................................................................................................231271.002710002002932118755307000
................................................................................................................................TTTCGT-TTTGCAACTCAAA........................................................................................................................191245.00245003100514387573000000
.....................................................................................................................................................CACAGGATTATACTGTGAG....................................................................................................191203.002030002000021198000000
..................................................................................................................................................AATCACAGGATTATACTGC.......................................................................................................191198.00198136292700000005100000
..................................................................................................................................................AATCACAGGATTATACTGG.......................................................................................................191191.00191104434300000001000000
...................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................................................221146.00146000300394432253000000
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................211113.0011300017010001831100000
................................................................................................................................TTTCGT-TTTGCAACT............................................................................................................................153100.00300000000864991560000000
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................20189.0089141016320110535200000
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................22183.008310040020402015100000
..........................................................................................................CGCAGTATATTTTTGT..................................................................................................................................................16177.0077000000000077000000
.........................................................................................................................................................GGATTATACTGTGAG....................................................................................................15177.00770000000372443000000
.......................................................................................................................................................CAGGATTATACTGTGA.....................................................................................................16171.0071000000017360000000
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................22162.0062010000000061000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGT...........................................................................................................................................23157.00570013191710624013000
................................................................................................................................TTTCGT-TTTGCAACTCAAAA.......................................................................................................................20155.005500100014323112100000
.....................................................................................................................................................CACAGGATTATACTGT.......................................................................................................16147.0047000000000047000000
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................19245.5091000200000089000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTT............................................................................................................................................22141.0041000100001043500000
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................21139.00392021030000202000000
........................................................................................................................................................AGGATTATACTGTGA.....................................................................................................15137.0037000000261946000000
......................................................................................................................................................ACAGGATTATACTGTGAGT...................................................................................................19136.0036000000000234000000
....................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................................................21134.003410000099951000000
..................................................................................................................................................AATCACAGGATTATA...........................................................................................................15131.0031000000100030000000
................................................................................................................................TTTCGT-TTTGCAACTCAA.........................................................................................................................18228.505700000019127181000000
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................18127.0027000200000025000000
................................................................................................................................TTTCGT-TTTGCAACTCAAAAA......................................................................................................................21426.001040000007952342000000
................................................................................................................................TTTCGT-TTTGCAACTCA..........................................................................................................................17225.00500000002223221000000
......................................................................................................................................................ACAGGATTATACTGTGAGA...................................................................................................19121.0021000000003711000000
......................................................................................................................................................ACAGGATTATACTGTGAA....................................................................................................18120.0020000000000119000000
.....................................................................................................................................................CACAGGATTATACTGTGA.....................................................................................................18120.0020000100002314000000
..........................................................................................................CGCAGTATATTTTTGTG.................................................................................................................................................17119.0019000000010018000000
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................20119.0019000170001100000000
..............................................................................................................GTATATTTTTGTGTTTT.............................................................................................................................................17217.0034000000000034000000
......................................................................................AATCACACGTCTCGACGCCT..................................................................................................................................................................20113.001342000000007000000
............................................................................................................CAGTATATTTTTGTGTTTTG............................................................................................................................................20113.001300041000106100000
........................................................................................................................................................AGGATTATACTGTGAGA...................................................................................................17112.001200000012900000000
......................................................................................................................................................ACAGGATTATACTGTGAGC...................................................................................................19112.0012000000000012000000
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................21111.001100010000505000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTA............................................................................................................................................22111.001100000001208000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGAA..........................................................................................................................................24111.001100000012430001000
...............................................................................................................TATATTTTTGTGTTTTG............................................................................................................................................17510.2051000000000051000000
..................................................................................................................................................AATCACAGGATTATACTGA.......................................................................................................19110.001010000002511000000
................................................................................................................ATATTTTTGTGTTTTG............................................................................................................................................1689.3875000000000174000000
.......................................................................................................................................................CAGGATTATACTGTGAGA...................................................................................................1819.00901100000124000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTT..........................................................................................................................................2419.00900006110010000000
......................................................................................................................................................ACAGGATTATACTGTGAT....................................................................................................1819.00900000000108000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGAAA.........................................................................................................................................2519.00900000000710001000
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................2018.00800020000006000000
.........................................................................................................TCGCAGTATATTTTTGTGTTTTG............................................................................................................................................2318.00800011310002000000
..................................................................................................................................................AATCACAGGATTATACTGTA......................................................................................................2018.00821300000110000000
......................................................................................................................................................ACAGGATTATACTGTG......................................................................................................1617.00700000000016000000
.................................................................................................................TATTTTTGTGTTTTG............................................................................................................................................1586.7554000000000054000000
.........................................................................................................TCGCAGTATATTTTTGTGTTT..............................................................................................................................................2116.00600004200000000000
......................................................................................................................................................ACAGGATTATACTGTGAGGG..................................................................................................2016.00600000000006000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................................................2316.00600000000114000000
..................................................................................................................................................AATCACAGGATTATACTTGA......................................................................................................2095.67510000001062861000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTAA...........................................................................................................................................2325.501100000000550100000
.......................................................................................ATCACACGTCTCGACGCCT..................................................................................................................................................................1915.00521000000002000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGAA..................................................................................................2415.00500000001220000000
..................................................................................................................................................AATCACAGGATTATACTA........................................................................................................1815.00500000002021000000
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................2215.00500000001202000000
........................................................................................TCACACGTCTCGACGCCT..................................................................................................................................................................1815.00510400000000000000
................................................................................................................................TTTCGT-TTTGCAACTC...........................................................................................................................1624.50900000023220000000
.......................................................................................................................................................CAGGATTATACTGTGAGGG..................................................................................................1914.00400000000004000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTTG...........................................................................................................................................2314.00400000000004000000
.....................................................................................................................................................CACAGGATTATACTG........................................................................................................1514.00400000000004000000
..........................................................................................................CGCAGTATATTTTTGTGTTAA.............................................................................................................................................2114.00400000000310000000
.....................................................................................................................................................CACAGGATTATACTGTGAGA...................................................................................................2014.00400000000400000000
............................................................................................................CAGTATATTTTTGTGTTTT.............................................................................................................................................1914.00400000000004000000
.......................................................................................................................................................CAGGATTATACTGTGAGT...................................................................................................1814.00401000010002000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTC..................................................................................................2414.00400000000004000000
.........................................................................................................TCGCAGTATATTTTTGTG.................................................................................................................................................1814.00400001300000000000
.........................................................................................................TCGCAGTATATTTTTGTGT................................................................................................................................................1914.00400002000002000000
.......................................................................................................................................................CAGGATTATACTGTGAGC...................................................................................................1814.00400000000004000000
.........................................................................................................TCGCAGTATATTTTTGTGTTTT.............................................................................................................................................2214.00400000000102100000
..........................................................................................................CGCAGTATATTTTTGTGTTG..............................................................................................................................................2013.00320000000001000000
.....................................................................................GAATCACACGTCTCGACGCCT..................................................................................................................................................................2113.00300100010001000000
..........................................................................................................CGCAGTATATTTTTGTGTTTG.............................................................................................................................................2113.00300000000003000000
..................................................................................................................................................AATCACAGGATTATACTT........................................................................................................1813.00310000000002000000
....................................................................................................................................................TCACAGGATTATACTGT.......................................................................................................1713.00300000000003000000
...........................................................................................................GCAGTATATTTTTGTGTT...............................................................................................................................................1813.00300002000001000000
.............................................................................................................AGTATATTTTTGTGTTTT.............................................................................................................................................1822.50500000000005000000
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2212.00210000000001000000
...........................................................................................................GCAGTATATTTTTGTG.................................................................................................................................................1612.00200000000002000000
...................................................................................................................................................ATCACAGGATTATACTG........................................................................................................1712.00200000000002000000
...................................................................................................................................................ATCACAGGATTATACT.........................................................................................................1612.00200000000002000000
.......................................................................................................................................................CAGGATTATACTGTG......................................................................................................1512.00200000000011000000
........................................................................................................................................................AGGATTATACTGTGAGT...................................................................................................1722.00400000000121000000
.........................................................................................................TCGCAGTATATTTTTGTGTT...............................................................................................................................................2012.00200001000001000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTTT.........................................................................................................................................2512.00200001100000000000
......................................................................................................................................................ACAGGATTATACTGTGAGGA..................................................................................................2012.00200000000002000000
.........................................................................................................................................................GGATTATACTGTGAGA...................................................................................................1612.00200000000110000000
.......................................................................................................................................................CAGGATTATACTGTGAT....................................................................................................1712.00200000000002000000
..................................................................................................................................................AATCACAGGATTATACTAC.......................................................................................................1912.00220000000000000000
..................................................................................................................................................AATCACAGGATTATAC..........................................................................................................1612.00200000000002000000
..........................................................................................................................................................GATTATACTGTGAGA...................................................................................................1512.00200000001001000000
..................................................................................................................................TCGT-TTTGCAACTCAAATCACAGGATT..............................................................................................................2712.00220000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................2112.00200000000002000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGG...........................................................................................................................................2312.00200020000000000000
..................................................................................................................................................AATCACAGGATTATACTGGA......................................................................................................2012.00200000011000000000
..........................................................................................................CGCAGTATATTTTTGTGA................................................................................................................................................1812.00200010001000000000
dm3
TGC-------------TATGCC----------------------------------CGCCATCCGGATGAGATGGCGGGG----TTAATAACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGT-TTTGCAATCCAAATCACAGGATTATACTGTGAGATGACCAGCGT----GC---CAGC---------AGCGAA------AAGCGACTGATA-TG------ATATC---------------------AATTATATSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................221669373.00669373000012868526431751211200177200178217691823313093013583918555574124268047422764145282676299781742980910581185280035694116148273415001925424000000000000000001892191692051128035142104215334528572720092134912422520917786193271325064736985171742715561822410120121081140204115131452365450531015316216931251881168887641622589239922351892269334424402399600000419418337155550105188406153403145648988397310333812104609213568189786631756621263901388261382211130879327223205000004741575813461110442834452141165138828276482475995414462458813313635742552957000052426415321527314837922295188575615334241887148126023634315251747272240048661487325132212941264139330723195119532724237430011292149971162771189182710544129171723187107464563459511246983074731140817790199898623032322261348523511867161237631068425824749814518542604996501440572211519843164232027062136839213187334766374176158701852132132832724326565911076699101203726547864
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................221454236.004542360000541562914013519108500000014220100230211261410122141418102573736113357192169373770000000000000000000000092945103274691701101371092706250713968762532511581817110625179224248204376916812241862354128318710679587156499679503172632913670500001100301001011771172590494733112231273558542717323350000117916816813921041357607610200175114041431236120622320065307000001046300000244700000000079297371210361276561019196684401431000011521024141385157529353421108122142046191814114118526119362391910467233243407235401331237415001099771723532301101101121012228131027355
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................211245631.00245631000062101915118816947200000303213041704468331303976910557741205284581391515446129301038122011913052000000000000000000000002616128543194632874717940612010929938253858444221351622614368218421011257649620784827051847396839263857884125106621443309111817120235240274815426902825525300658353268272415460640533743539166475335000001882202564750625182185802034101456990494598353954687881049217808324213025825335201006121363000006613600210010171428027222711862547519237545680002678000053326132242681122684815018311814358798983614766537513655212486354148478243272196147163113114577720814476852685346299405497994992252352624333213769252326531881581834449210460633422051857066610109111424691591172201911
..........................................................................................................CGCAGTATATTTTTGTGTTTTT............................................................................................................................................22120240.002024000000001000000000000164510091572450000000033414935369358914024622934316225136201092622341390000000000000000000000043251262250510295010460201300221281213106400000412510000000401150010000000494265201118187753660503454401362441121001008161021111025230131440580016021173802014364417911217200000933300220003530101001201000101100000672270764183299215186771547712919712621203794209495718463319512012713922202155623116199776333300081656021870321216419011311538130919122572300801120100112520300253551
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................21118844.0018844000000000011100000006420318334611620412334335293334198130291139234682140219552700092000000000000000000334125570800117181221722215811106351101716235951813170210102000011100000000004389612527510836137286416018423131100000295732604556410421407244421913196117518119239152211958514100019051400000135800200015799856711914412104677751905814400001791882501562361203014552650501634441167568285231959552175316712557610849110438227790518263130591158702622861221331652071035171413239313693245517634109812103656571116662866932717312113910256127144328324121315414140637
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................1919015.009015000000000000000000009192002840259445098110811565191456131113131416512000000000000000000000001249223305153560011002523421431531522282200403201100000000715610346470039742627372894243739292940751510000004608114961540224014661352314015130710150722250200040550000092600000055342837617120016140009222580000133371952429616910542211281242816373732361623927128411286266392111873086480957535745385322592317989719814765216208816178152644392015829033657615311213191215211132121483524244379113325739
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................2317230.007230000010000000010000003500001000000011500401218415182181655000000000000000000000008479486089800294529961101152120011160555215589161810307180500000000010000000031101561200111210760004400000111500591280130018615070140054005029000000005000001511000000000141001212463481812363296001420000101111068532744021012110201049131101096308403349523914275135100040721130100018380012200003300310111286813980
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................2116341.006341000000000000000000002210066214300000061315412733271972027658464125170000000000000000000000022230000021000000000000010000000001000002000000000060000000000022539351216383032232030225257000004091100177010411711144031777370500423103416309012000000300200050442511381064215123232713210000341361928131683298820526165321341125213019219206730171881493181592136827642831845938811001883331627133929722162223277254431111023191174282180729151011919426544731200
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................1815223.00522300000000000000000000518000000000000002020300011309430530000000000000000000000015061468124254900000000100000000410020003110000001000000000000000000000000003350013444100000000000004020010021120401000020029050000010000000047000000000150210075000100000000030000000000000000000000000041004201046001802013000000000000000000000070010000000000000000000010013
...................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................................................2214862.004862000000000000020000000120000020000000100000000202010110000010000000000000000059861244854801000222100100000000280653314434001030280101020201020140000202041003002834321040000006686004132032006143356339112130010002370000000000000000110000000000000401011176001974450247500000020010000000003000100000013270010061216010240200014000111112120010714801000000000000000000000012
..........................................................................................................CGCAGTATATTTTTGTGTTT..............................................................................................................................................2014573.0045730000000000000000000031601778101000001613620421812553913115400030126000000000000000001710816000001760010033650003100168225000000000000000010100000000000151520802128961316231938000005011400102190723140133503624125161433031932300402300000060010003244289251220233000105510000217111669371691243112292116113241131533261641247924171283531805733105037753620010749296163118332612143863732164902876885535106478124324311115717112719213213842611435
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................2013559.0035590000110000000000010000000010086157215226631201035103111610000000000000000000000000731016265202012210010003230002319111724230120020230110100082380000000000104300410524211002000002221412918131125042101352497175811701722019004860000000000900000200000000002010002100035000310000411004134113413695220003023411326723111756735512134262862304911184000114131003308340425000011000006011002117116179
..................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................................................2312958.002958000000012000010000000000002020000000000000000100000000000000000000000000000032737023734611213861000000001100011013987419761000350291000201031360000231090100000410001020000005700110141111040002366237239010750280082000000000060000000000000000000051233840012914600920000000000000000000000000000000000110023000112000000000000000010000000100000000000000000000100000245
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................2212917.0029170000303661010400000001000000000000000101020000001200000000000000000000000000545567363639848108134711132215103451033440213988489202171324030000000000100000000010041000020100000000005010002617090019605025033100000410100000000100000010000000001000002301082003100000100200011000000000000000010000001412030100203000001000100000000011100000000000000000000000023
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................2212858.00285800000000000001000000517000300000000663192311307205744400000000000000000000000336367225380000050200001001100001100261642520210101100000000001013000001005015400217216751210000000001838112050012170170306100000471200000000000000450000001006210003655300258600760000011221464120200020112145000372627754351037462835241101021200001011193201116352236300020000020001020114601099
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................2112468.0024680000002030010200000000000010000000000001000001010001000000100000000000000000208220148234118251612101100010101400320100155702848641801608240000000000000000000000000000001000000000000000002120000023010000000000400000000000000000100000000000000164000880050000000001000000000000000000000001000000010105120000000000000010000000810000000000000000000000100801
..........................................................................................................CGCAGTATATTTTTGTGTTTTGT...........................................................................................................................................2312223.00222300000000000000000000013101410000000010001411031113712320004210000000000000000013230400010100210010010006030700000001000001000000050000000000005401131271235993170000010020062606101061430135241107022311020003000000001100000020843101021153211315551800000524415119403443483117163512780412445132514216447493175532263710538281441246313227185311347273516524343119111411314411250763523571291337131013460
.................................................................................................................................................AAATCACAGGATTATACTGTGAG....................................................................................................2311694.0016940000100100010000000000000000000000000000002000001020000000000000000000000000321392231369010031131001100210000910171537402310100700000000000000000000000020000120100002000000000000310200580103020000001600000000010000000000000000000001038000820010000000000000000000200000000000001000010000212111010000100010020000000001000000000000000000000000125
..........................................................................................................CGCAGTATATTTTTGTGTT...............................................................................................................................................1911439.0014390000000000000000000012200241100000002001002320122652100002100000000000000000088111100000001300000011000000331300000000000000000000100022000000105021350042352000002003304790222027002400013011901111100300000000010000005678103410420001213000005342618462011669315130081086811926111369573700210473663941161217354311964302620252143157218396133600170132411711131328351318470
..................................................................................................................................................AATCACAGGATTATACTGTGATG...................................................................................................2311275.00127500000000000000000000000000000000000000000000000000000000000000000000000000003383532293540000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTC............................................................................................................................................2211141.001141000000000000000000000000010000000000000109000000013220000000000000000000000001000000000000010000000000000000000000000000000000000000000000112903467866731215000001082004103350010017020100000000200001000000010000000001012000000010000000000211223105110021430117320032429352161715210370176112384745300025274723400604012110000112110022001213086120
..................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................................................2211049.00104900000001000000000000000000100000000000000000000000000000000000000000000000002302661803080110110000020000000000122641000000100000000001000000000000001000010000000000000000000100300110000010000002000000000000000001000000000000000300001100000000010010001000000110000000010011000030000000010000010000000100000002000000000000000000000000006
..........................................................................................................CGCAGTATATTTTTGTGTTTTGA...........................................................................................................................................2311022.00102200000000000001000000000000000000000002011412020105322000000000000000000000002211030001110000000000000000010100000000000000000202000010001000446150222015266000002000004601320030121350000101010000000000000037000000170011061811532260301010000003652101205272100503103110920213533336945826111811191396121672009321365944001151438851153410019115104013321114583415
..........................................................................................................CGCAGTATATTTTTGTGT................................................................................................................................................181901.0090100000000000000110000010000002002000011030102010120001000201000000000000000001813111400000110001000000000100012001000001000000000003000014000001122003531350000000004209000120010020022310060136006422002000000000000000019211727850010000000000000125011000000020230027362770341435186100101242391116281149192412613241278221551163541211040060101342431024142234
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................181893.0089300000000000000000000030005010140300001003210010122003000000000000000000000000000000000000000000000000000000000000000000000000001000000000000281040118613109300100000000500110241051500020400013071810150030200000003002000481823241315000110014000000000500010000012002001100001057171823321010717510441654593015324512051022011063303002400100010110122250
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................181888.008880000000000000000010038000000155112224000311000102012001200000000000000000000000352515035323001000100010191713231523002018040000000001000117220000102444001104434000000010000000718061002261118142490402051000000000000000030000002001303200100000107110000201422010022031156151230013136151910133125231262973301462114712811200226002000073000000000000000000000012134
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................221775.00775000000010000020000000010001000000000120100000100020000000000000000000000000084105671950323523050102000100000110141820111100000700000000002001001100000010000113030000200000234213321010030020102002000000000000001000002100000000000000002000040020000006000000010000001000100000011000000111100020000000100010130100005512000000000000001000000000023
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................221639.006390000100000001000000000000000000000010010024100110503100000000000000000000000414670000011100020010100000181171625000026030000000010100000000000100300130313210210000067030015160130033160120170150000009401000000000000001400000000030000181000010700032000000200020110001000100010000153201121204270302407010001001031110000071000000000000000000100010015
..................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................................................211598.005980000000000000000000000000000000000000000085000006410000000000000000000000000212412311010311000000060100011159301000000101010000000035416350000000000200010110001002000000010100663601800200301801100100031000000000000000000000000000000000000000100100000000060311100011010001000010010000220303020020100002000002100010018000000000000000000000000004
............................................................................................................CAGTATATTTTTGTGTTTTG............................................................................................................................................201559.00559000000000000000000000000021340000000120000000002112210000000000000000000000000000000000000000000000000000000000100500000000000000000000000001301050111100300000404104000112303210523001440010031120000000000003000000124512000001000110000000000000000000010110020111100222021031200040511502125139400111200301002552102410003000301112100232350
..........................................................................................................CGCAGTATATTTTTGTGTTTTA............................................................................................................................................221519.0051900000000100020000000001001000000000101020221101103413000000000000000000000002001020000100001000010100004100000001000000000000000000000000000061106511121310000000000022028240671012100010000100300100000000020000003011421001000040000000011111131202121032003212751012805310500130013107867111000121162121101403144142022140021063120025210100
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................211494.0049400000000000012000000000000100000000200000011001060100000000000000000000000001921947110012010100600200000115358390000000208010000001407500000000001210000003000000000000002081470230011002030600110052000000000000000000000000000000000000000200000000000030101301020000000000002030200101220000200200000000010000000012000100000000000000010002111
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................211440.00440000011010002010000000000000000000000000010100000200000000000000000000000000013791521000112000100110000151525130300000105000000003023000000000001000001000000000000000000653301400760702804000010074000000000000000010000000000100000000000900600000000040300000001010000100001010100121101000210100003000200001000001000000100000000000000000101
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................191410.004100000000000000000000001000701200000000000010000011120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111700413200200000001001002101510070200000200101600300000000000000000007104001010530001000000000000000000001100000030110004171120360103081272022102210000141002001901112601001200000100010042000
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................201394.0039400002100000111000000000000000000000000000000000000000000000000000000000000001016615224035720000021110021534239134330260020100000000000000000000000100000000000000000000006010026000041117010220000013000000000000000000000000000000001103000111000000000000000000000000000000000000000000000010000000000010000001000000010000000000000000000000000035
....................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................................................211341.003410000000000000000000000000000000000000001000000000000000000000000000000000000116000000000000000000000400106381202000030000010101000000000000000000000000010200000010000703100001301000020020011000000000000000000000000000100000100000970110700000000010000000000100000000000010000000000000110000000000000000000014100000000000000000000000001
....................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................................................201335.00335000000000000000000000000000000000000000000000000000000000000000000000000000011774060203120010032110018205820761613001069000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000079
..................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................................................231310.003100000001000000000000000000000000000000000000000000010000000000000000000000000296134321700021000000000000002037172120000000700000000100000000000000000000000000000000000000032010012000100000100400000000000000001000000000000000061900010110013000000000000000000000000000000000100000201000200100000010000000000000100000000000000000000000000015
..........................................................................................................CGCAGTATATTTTTGTGTTTG.............................................................................................................................................211290.00290000000100000000000000000000000000000000000100000000000000000000000000000000000010000001000000001000000001101000000000000000000000000000000001101132301006100000107100240224806334113000100000120000000000000002000000414210000210003000000000000001100000010000000000000010100000010000222317711000111011002002701004000203213035200303226150
.....................................................................................................................................................CACAGGATTATACTGTGAG....................................................................................................191254.002540000000000000000000036000000000000200000010000010100000000000000000000000000241050500102100000000021108201837810100000410000000000000000000010000000000001000000000000010042050002000004000000150100000000000000010000003000000000000000000000020000000000000000000000000010000004140200010100000000000000000000001000000000000000000000000006
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................201175.001750000000000000000000000000200000000100200010111001120100000000000000000000000101000000000000000000000000000000000000000000000000000000000000000040301020071000000001000120000025103300000000000100000000000000000000020120000201001001000000000040100000000000000020200260010070104210011050103010011313000100122500010210000100000000020040
..................................................................................................................................................AATCACAGGATTATACTGA.......................................................................................................191170.0017000000000000000000000000000000000000000000000000000000000000000000000000000008219200000010000100020000000021110000100100000000001000000000000000000000012000000000000015214070001301301050010003000000000000000001000000000000000510001000000000000000000000000000000000001000000141303001200001110000010200010000000000100000000000000000000
.....................................................................................TAATAACACGTCTCGACGCCT..................................................................................................................................................................211160.001600000000000000000000000100000000000000110001000011001100000000000000000000000000001000010000000000000000000000000000000000000000200000001000000002001000001000000000000000000000000000000000000000100000000000000000204011126131943131001000001100011100001040002101002110103120000000000401000000000081410100010200100202000101000000200230
...........................................................................................................GCAGTATATTTTTGTGTTTTT............................................................................................................................................211157.0015700000000000000000000001008000000000311124201044000107000000000000000000000000100000000000000000000000000000000000000000000000000000000000001030018248000100000010000000000000000000000000000002000000000000200000000000000000000000000000001302121030020243012373013011502400000000001000001300000010000000110000000000000000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGAA..................................................................................................241157.0015700000000000001000000000000000000000000000000000000000000000000000000000000002927203100000000000000000000000603000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039
.........................................................................................................TCGCAGTATATTTTTGTGTTTT.............................................................................................................................................221146.00146000001000000000000000001000000000002000000000100011200000000000000000000000011020000000000000100000300000001100001000000000000010000000000000000051000101100000000000100030022100100000000010000000000000000000000001160001140003000000000000000100000000010001100000343212016001141150000210010000002303000001200000010200000000000011020
..................................................................................................................................................AATCACAGGATTATACTGTGAGG...................................................................................................231138.0013800000000000000000000000000000000000000000000000000000000000000000000000000002020526000000000000000000000001010000000000000000000000000000000500000000000000000000000000022020010000103000000500000000000000000000000000000000042000131100300000000000000000000000000000000000000000100000020000000000000000000000000000000000000000000000008
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTT..........................................................................................................................................241136.0013600000000000000000000001000000000000010000000100010100000611000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010010000000600001020000000000000010000000000000000000000000030110001012100100000000003000300000000000001009002047010000000300301142021100000001131200221003211030501110000000010010
.........................................................................................................TCGCAGTATATTTTTGTGTTTTG............................................................................................................................................231114.0011400000000000000000000000000100000000010000130110221211000000000000000000000000000000001000000000000000000000000000000000000000001000000000000010002020300100000000000000000001010000000000000000000000000000000000000202001011100100000000000001001101000000000020010301122011014011241120010000100004100000031011200000101000000000000050
......................................................................................AATAACACGTCTCGACGCCT..................................................................................................................................................................201100.00100000000000000000000000000000000000000000000100000000010000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000130000000000000000000000000000001000000000000000000000000000000000000100011324195140001000010200000000001011000002100003211000000000000001000000000011001000000102010300001000000000000120
......................................................................................................................................................ACAGGATTATACTGTGA.....................................................................................................17199.0099000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000480000000000000000000000000000000000000000000000030100027401015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................................................19185.00850000000000000000000000000010000000000000000000000000000000000000000000000000404202001140000000011000110151870200102000000000000000000000000000000000000000000000000000100000330400000000008000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
....................................................................................................................................................TCACAGGATTATACTGTGAGT...................................................................................................21184.008400000000000000000000000000100000000000000000010000100000000000000000000000006440000000000000000000000008413000000010000000000000000000000000001000000000000000003000000000000001000000000000000000000000000000000000400000000000006001400000000000000000000000000000000010011010000000030000000000001000000001000000200000000000000000010
..........................................................................................................CGCAGTATATTTTTGTGTTTTGC...........................................................................................................................................23182.00820000000000000000000000100000000000000000000000000010100000000000000000000000000100000110000100000000100001000000000000000000000000000000000000000101000031000000001001000110000002000000000000000000000000000000000000000000010030010000000000201000002021001101201000120100001000000022302000000043000000160000000100001000000000011010
droEug1
TGT-------------TTTTTC----------------------------------TCCAACCCA-----------GAAG----TG-ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTT-AT-TTTGTAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGT----GC---CAGC---------AGCGAA------TAATGAATAAAA-AG-------TGTA---------------------AATTATTCSizeHit CountTotal NormTotal
No Reads
droBia1
TGT-------------TATGCC----------------------------------CCCCATCCAGA---------GAAG----AG-AACCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTAG-GC-TTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGT----GC---CAGC---------AGCAGA------AAGGGATTGAAG-CG-------------------------TATT---TAT--TAASizeHit CountTotal NormTotal
No Reads
droTak1
TGC-------------TTCC--------------------------------------------------------GAAGTCATCG-ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTG-GT-TCTGAAACTCAAATCACAGGATTATACTGTGAGCTGACCAGCGT----GC---CAGC---------AGCAAG------AAGTTTATAGGATGG------ATTTG---------------------AATTATATSizeHit CountTotal NormTotal
No Reads
droEle1
TGT-------------TTGCC---------------------------------------ATCCC-----------GGAG----AG-ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTT-GT-TTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGT----GC---CAGC---------AGCCAA------GAGTGAATGGAACTG------GTTTG---------------------AGCAACATSizeHit CountTotal NormTotal
No Reads
droRho1
TGT-------------GTTCC---------------------------------------GTTCT-----------GGAG----AG-ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTC-GT-TTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGT----GC---CAGC---------AGCGAA------GAGTTTATGAAA------------TT---------------------GGTTCTAGSizeHit CountTotal NormTotal
No Reads
droFic1
TGT-------------TATCCA-------------------------------------CATCCC-----------GAAG----AG-AACCCACGTCTCGACGACTCGCAGTATATTTTTGTGTTTTGTTG-GT-TTTGGAACTCAAATCACAGGATTATACTGTGAGCTGACAAGCGT----GC---CAGC---------AACCAA------AGAAATCTAAAA-CG------GTTTGG--------------------AAT-TAAASizeHit CountTotal NormTotal
No Reads
droKik1
TGC-------------TTCCTC---------------------------------------TCC------------GA------AG-AACCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTG-TGTTTGAAAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGT----GC---CAGC---------AACAGC------AGCAGCATAATT-AG------CCTTT---------------------AATTATAGSizeHit CountTotal NormTotal
No Reads
droAna3
CAC-------------TCTACC----------------------------------A--------------------------------TCCATGTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTT-GG-TTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGT----GT---CAGC---------AGCTGA------AACAGTGCA-----------------TAATTAAAGAAT-------CCTATTTGCCSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................2218324.008324232457492524294619
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................2111480.00148010191278568325
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................191280.002803643146819100
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................211134.0013451810171569
..........................................................................................................CGCAGTATATTTTTGTGTTTTT............................................................................................................................................221110.001102021321243
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................21159.0059190111325
..........................................................................................................CGCAGTATATTTTTGTGTTT..............................................................................................................................................20158.005833071530
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................20138.003810024121
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................22135.003510255013
..........................................................................................................CGCAGTATATTTTTGTGTT...............................................................................................................................................19125.00251005811
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................18118.00182120202
..........................................................................................................CGCAGTATATTTTTGTGTTTTGT...........................................................................................................................................23116.0016220093
..................................................................................................................................................AATCACAGGATTATACTGC.......................................................................................................19114.00140140000
..................................................................................................................................................AATCACAGGATTATACTGA.......................................................................................................19110.0010311005
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................22110.0010370000
..........................................................................................................CGCAGTATATTTTTGTGT................................................................................................................................................18110.0010000127
..........................................................................................................CGCAGTATATTTTTGTGTTTTGA...........................................................................................................................................2319.009120105
............................................................................................................CAGTATATTTTTGTGTTTTG............................................................................................................................................2017.007100015
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................2317.007011104
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................1817.007200140
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................2115.005031001
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................2115.005000203
..........................................................................................................CGCAGTATATTTTTGTGTTTTA............................................................................................................................................2215.005000122
..........................................................................................................CGCAGTATATTTTTGTGTTTG.............................................................................................................................................2115.005000014
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................1815.005500000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGC...........................................................................................................................................2315.005041000
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................2015.005410000
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................2214.004020101
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................2014.004200002
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................1914.004000121
.........................................................................................................TCGCAGTATATTTTTGTGTTTTG............................................................................................................................................2313.003010101
..........................................................................................................CGCAGTATATTTTTGTGTTTTC............................................................................................................................................2213.003010101
..........................................................................................................CGCAGTATATTTTTGTGTTG..............................................................................................................................................2013.003000012
...................ACC----------------------------------A--------------------------------TCCATGTCTCGTCGCCT..................................................................................................................................................................2113.003020001
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................1812.002000002
...............................................................................................................................................TCAAATCACAGGATTATACTGT.......................................................................................................2212.002000011
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2212.002001010
..........................................................................................................CGCAGTATATTTTTGTGTTC..............................................................................................................................................2012.002020000
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................2212.002101000
..................................................................................................................................................AATCACAGGATTATACTGTT......................................................................................................2012.002100001
.....................C----------------------------------A--------------------------------TCCATGTCTCGTCGCCT..................................................................................................................................................................1911.001100000
.............................................................................................................AGTATATTTTTGTGTTTTGTT..........................................................................................................................................2111.001100000
...............................................................................................................................................TCAAATCACAGGATTATACTGG.......................................................................................................2211.001000100
.................CTACC----------------------------------A--------------------------------TCCATGTCTCGTCGCCT..................................................................................................................................................................2311.001100000
..................................................................................................................................................AATCACAGGATTATACTGGA......................................................................................................2011.001000001
..........................................................................................................CGCAGTATATTTTTGTGTTTAT............................................................................................................................................2211.001000001
.................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................................................2111.001100000
...........................................................................................................GCAGTATATTTTTGTGTTTTC............................................................................................................................................2111.001000001
.........................................................................................................TCGCAGTATATTTTTGTGTTTT.............................................................................................................................................2211.001000001
..................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................................................2111.001000001
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTTT-G.......................................................................................................................................2611.001001000
.................................................................................................................................................AAATCACAGGATTATACTGTGAT....................................................................................................2311.001010000
.............................................................................................................AGTATATTTTTGTGTTTT.............................................................................................................................................1811.001010000
...................................................................................................................................................ATCACAGGATTATACTGA.......................................................................................................1811.001100000
.......................................................................................................................................................CAGGATTATACTGTGAGT...................................................................................................1811.001100000
..................................................................................................................................................AATCACAGGATTATACT.........................................................................................................1711.001000100
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTT..........................................................................................................................................2411.001000010
........................................................................................................................................TTGAAACTCAAATCACAGGATT..............................................................................................................2211.001010000
........................................................................................................................................TTGAAACTCAAATCACAGGATTATACT.........................................................................................................2711.001010000
droBip1
GAACTAAACAAGGTGATATCAC----------------------------------TCCTAC--------------------------ATCCATGTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTT-GT-TTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGT----GT---CAGC---------AGCCGA------ATATCAGCAATT-CAATATCTAATAT-AT----------------CTAATTATACSizeHit CountTotal NormTotal
No Reads
dp5
TGT-------------TTTCCT----------------------------------AGGTGTGCC-----------G-AA----AG-AAGCGGCGTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTG-TG-TCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGT----GC---TATC---------AAGAGAGTGTGAACGGAACCCA------------------------AG--TGTATTTTGTATTTCATSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................2112481.00248112034113192655913400
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................2212302.002302359333546047266531319
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................191391.00391927417138448000
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................201264.002640248040111000
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................221162.001620102114504540
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................201110.00110011000000000
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................21189.008901831202420012
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................21166.006605200635000
..........................................................................................................CGCAGTATATTTTTGTGTTT..............................................................................................................................................20146.0046018104518000
..........................................................................................................CGCAGTATATTTTTGTGTTTTT............................................................................................................................................22135.0035010022120000
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................22130.003002063100000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGT...........................................................................................................................................23128.002801520224030
..........................................................................................................CGCAGTATATTTTTGTGTT...............................................................................................................................................19124.00240900726000
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................23124.002403101201430
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................18122.002202200000000
.....................................................................................................................................................CACAGGATTATACTGTGAG....................................................................................................19119.001901900000000
...................................................................................................................................................ATCACAGGATTATACTGTG......................................................................................................19118.001801800000000
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................18118.00188143110000
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................21114.001401400000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGA...........................................................................................................................................23112.00120110611200
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................22110.001001000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................................................2319.0090100000710
.................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................................................2118.0080800000000
..................................................................................................................................................AATCACAGGATTATACTGC.......................................................................................................1918.0081052000000
...................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................................................2218.0080800000000
............................................................................................................CAGTATATTTTTGTGTTTTG............................................................................................................................................2017.0070400102000
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................1917.0070700000000
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................1816.0060600000000
....................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................................................2016.0060600000000
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................2015.0050400010000
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................2214.0040211000000
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................2114.0040211000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTTG-........................................................................................................................................2514.0040100110010
....................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................................................2114.0040400000000
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................2113.0030200010000
..................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................................................2213.0030300000000
.................................................................................................................................................AAATCACAGGATTATACTGT.......................................................................................................2013.0030200100000
.................................................................................................................................................AAATCACAGGATTATACTG........................................................................................................1912.0021000010000
..................................................................................................................................................AATCACAGGATTATACTGTGTT....................................................................................................2212.0020200000000
.........................................................................................................TCGCAGTATATTTTTGTGTTTTG............................................................................................................................................2312.0020100010000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTT..........................................................................................................................................2412.0020000002000
...........................................................................................................GCAGTATATTTTTGTGTTT..............................................................................................................................................1912.0020200000000
....................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................................................1912.0020200000000
...........................................................................................................GCAGTATATTTTTGTGTT...............................................................................................................................................1812.0020100010000
...................................................................................................................................................ATCACAGGATTATACTGTGAA....................................................................................................2111.0010100000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTC............................................................................................................................................2211.0010000010000
..................................................................................................................................................AATCACAGGATTATACTGTGAGAA..................................................................................................2411.0010000000100
..................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................................................2111.0010100000000
..........................................................................................................CGCAGTATATTTTTGTGTTTTA............................................................................................................................................2211.0010000010000
....................................................................................................................................................TCACAGGATTATACTGTGAGT...................................................................................................2111.0010100000000
.......................................................................................................................................................CAGGATTATACTGTGAGA...................................................................................................1811.0010010000000
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2211.0010100000000
..................................................................................................................................................AATCACAGGATTATACTGTGATT...................................................................................................2311.0010100000000
..................................................................................................................................................AATCACAGGATTATACTGA.......................................................................................................1911.0010100000000
...........................................................................................................GCAGTATATTTTTGTGTTTTGTTG-........................................................................................................................................2411.0010100000000
....................................................................................................................................................TCACAGGATTATACTGTG......................................................................................................1811.0010100000000
..................................................................................................................................................AATCACAGGATTATACTGTT......................................................................................................2011.0010000001000
...................................................................................................................................................ATCACAGGATTATACTGTGAGC...................................................................................................2211.0010100000000
..................................................................................................................................................AATCACAGGATTATACTGTGACC...................................................................................................2311.0010100000000
...........................................................................................................................................AAACGCAAATCACAGGATTATACTGTGA.....................................................................................................2811.0010100000000
...............................................................................A----AG-AAGCGGCGTCTTGACGCCT..................................................................................................................................................................2211.0010100000000
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................1811.0010100000000
.................................................................................................................................................AAATCACAGGATTATACTGTGAG....................................................................................................2311.0010100000000
..................................................................................................................................................AATCACAGGATTATACTGTA......................................................................................................2011.0010100000000
...........................................................................................................GCAGTATATTTTTGTGTTTTGT...........................................................................................................................................2211.0010100000000
..........................................................................................................CGCAGTATATTTTTGTGT................................................................................................................................................1811.0010000010000
.................................................................................................................................................AAATCACAGGATTATACTGTGAGT...................................................................................................2411.0010100000000
...........................................................................................................GCAGTATATTTTTGTGTTTTT............................................................................................................................................2111.0010100000000
.....................................................................................................................................................CACAGGATTATACTGTGA.....................................................................................................1811.0010100000000
..........................................................................................................CGCAGTATATTTTTGT..................................................................................................................................................1611.0010000000010
..........................................................................................................CGCAGTATATTTTTGTGTTTTGC...........................................................................................................................................2311.0010010000000
........................................................................................................................................................................ATGCTGGGCGT----GC---TATC---------AAGAGA.............................................................2311.0010000100000
.................................................................................................................................................AAATCACAGGATTATACTGTGG.....................................................................................................2211.0010100000000
..............................................................................................................GTATATTTTTGTGTTTTGT...........................................................................................................................................1911.0010100000000
..........................................................................................................CGCAGTATATTTTTGTGTTTA.............................................................................................................................................2111.0010100000000
...................................................................................................................................................ATCACAGGATTATACTGTA......................................................................................................1911.0010100000000
.....................................................................................................................................................CACAGGATTATACTGTGAGA...................................................................................................2011.0010100000000
..........................................................................................................CGCAGTATATTTTTGTGTAA..............................................................................................................................................2020.5010000100000
................................................................................................................................TTG-TG-TCTGAAACGCAAAG.......................................................................................................................1920.5010100000000
........................................................................................................................................................AGGATTATACTGTGAGAA..................................................................................................1830.3310100000000
................................................................................................................................TTG-TG-TCTGAAACGCAAAAA......................................................................................................................2060.1710100000000
droPer2
TGT-------------TTTCCT----------------------------------AGGTGTGCC-----------G-AA----AG-AATCGGCGTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTG-TG-TCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGT----GC---TATC---------AGAGAG-TGTGAAAGGAACCCA------------------------AG--TGTATTTTGTATTTCATSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................1911558.001558126846100341064
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................2211235.00123540150195263148439
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................211410.00410818735561204
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................181236.0023622500470
..................................................................................................................................................AATCACAGGATTATACTGG.......................................................................................................191176.0017617501000
..................................................................................................................................................AATCACAGGATTATACTGC.......................................................................................................191117.0011711600100
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................21149.00490947722
..........................................................................................................CGCAGTATATTTTTGTGTTT..............................................................................................................................................20130.00300447213
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................22129.00290192350
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................20127.00270160830
..........................................................................................................CGCAGTATATTTTTGTGTT...............................................................................................................................................19125.00250213019
..........................................................................................................CGCAGTATATTTTTGTGTTTTT............................................................................................................................................22125.00250112381
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................21118.0018073116
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................18111.0011830000
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................20110.00100100000
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................2317.007012121
..........................................................................................................CGCAGTATATTTTTGTGTTTTGA...........................................................................................................................................2316.006021003
.....................................................................................................................................................CACAGGATTATACTGTGAG....................................................................................................1913.003030000
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................2213.003030000
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................2113.003030000
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................2213.003030000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGT...........................................................................................................................................2312.002010010
.......................................................................................................................................................CAGGATTATACTGTGAGT...................................................................................................1812.002110000
..........................................................................................................CGCAGTATATTTTTGTGT................................................................................................................................................1812.002002000
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................2112.002200000
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................2112.002000110
..........................................................................................................CGCAGTATATTTTTGTGTTTTC............................................................................................................................................2212.002000011
..................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................................................2312.002020000
.......................................................................................................................................................CAGGATTATACTGTGAGA...................................................................................................1812.002110000
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2211.001010000
...................................................................................................................................................ATCACAGGATTATACTGC.......................................................................................................1811.001100000
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................2211.001010000
..................................................................................................................................................AATCACAGGATTATACTAC.......................................................................................................1911.001100000
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................2011.001010000
..........................................................................................................CGCAGTATATTTTTGTGTTTA.............................................................................................................................................2111.001010000
..................................................................................................................................................AATCACAGGATTATACTGGA......................................................................................................2011.001010000
..................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................................................2211.001000010
....................................................................................................................................................TCACAGGATTATACTGTGAGT...................................................................................................2111.001000100
............................................................................................................................................AACGCAAATCACAGGATTATAC..........................................................................................................2211.001010000
......................................................................................................................................................ACAGGATTATACTGTGAGT...................................................................................................1911.001010000
.................................................................................................................................................AAATCACAGGATTATACTGTGAGA...................................................................................................2411.001010000
........................................................................................................................................................................ATGCTGGGCGT----GC---TATC---------AGAGAG-TGTGA.......................................................2811.001000001
............................................................................................................CAGTATATTTTTGTGTTTTG............................................................................................................................................2011.001010000
..................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................................................2111.001000010
.....................................................................................................................................................CACAGGATTATACTGTGA.....................................................................................................1811.001010000
...............................................................................................................................GTTG-TG-TCTGAAACGCAAA........................................................................................................................1911.001000001
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................1911.001001000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTTG-........................................................................................................................................2511.001000100
..........................................................................................................CGCAGTATATTTTTGTGTTTTGG...........................................................................................................................................2311.001010000
...................................................................................................................................................ATCACAGGATTATACTGTG......................................................................................................1911.001010000
.................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................................................2111.001010000
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................1811.001000001
...................................................................................................................................................ATCACAGGATTATACTGG.......................................................................................................1811.001100000
...................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................................................2211.001010000
....................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................................................2111.001010000
..........................................................................................................CGCAGTATATTTTTGTGTTTTTA...........................................................................................................................................2311.001001000
..........................................................................................................CGCAGTATATTTTTGTGC................................................................................................................................................1820.501100000
..................................................................................................................................................AATCACAGGATTATACTGCCT.....................................................................................................2120.501000010
droWil2
GCT-------------CTCGTC----------------------------------GACCA------------------C----AG-A---CTATTCTTG-CGTCTCGCAGTATATTTTTGTGTTTTGTTC-AATTTGTCAACTCAAATCACAGGATTATACTGTGAGCTGCGAAATGGAAATCC---ACGC---------AACCA-----------TTTTAAAA------TCAAATTG-ACTTA--AA--TGTCTT---CTCCATACSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................2215015.00501546158623999750
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................211981.00981495224264142
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................191782.007823171774817862
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................181202.0020218060142
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................211201.0020108015142
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................221162.0016201230345
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................20166.00663440415
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................21145.00450160227
..................................................................................................................................................AATCACAGGATTATACTGC.......................................................................................................19136.0036360000
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................20131.0031031000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGA...........................................................................................................................................23128.0028000280
..................................................................................................................................................AATCACAGGATTATACTGG.......................................................................................................19219.0038380000
..........................................................................................................CGCAGTATATTTTTGTGTT...............................................................................................................................................19119.0019000154
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................18116.0016016000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGT...........................................................................................................................................23114.001424071
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................21112.0012101001
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................21111.0011011000
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................23111.001101091
..........................................................................................................CGCAGTATATTTTTGTGTTTTT............................................................................................................................................22111.0011000101
..........................................................................................................CGCAGTATATTTTTGTGTTT..............................................................................................................................................20110.001000091
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................1819.00906021
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................2218.00802033
.....................................................................................................................................................CACAGGATTATACTGTGAG....................................................................................................1917.00704012
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................2217.00706010
..........................................................................................................CGCAGTATATTTTTGTGTTTTA............................................................................................................................................2217.00700061
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................2216.00603030
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................1915.00503020
..........................................................................................................CGCAGTATATTTTTGTGTTTTTG...........................................................................................................................................2315.00501031
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................1815.00502030
.......................................................................................................................................................CAGGATTATACTGTGAGA...................................................................................................1814.00404000
...........................................................CA------------------C----AG-A---CTATTCTTG-CGTCT..................................................................................................................................................................2014.00400040
..........................................................................................................CGCAGTATATTTTTGTGT................................................................................................................................................1814.00400040
..................................................................................................................................................AATCACAGGATTATACTGTGAAA...................................................................................................2314.00402020
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................2014.00401012
............................................................................................................CAGTATATTTTTGTGTTTTG............................................................................................................................................2014.00401021
.......................................................................................................................................................CAGGATTATACTGTGAGT...................................................................................................1814.00413000
..........................................................................................................CGCAGTATATTTTTGTGTTTG.............................................................................................................................................2114.00400031
...................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................................................2213.00303000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTT..........................................................................................................................................2413.00300030
..................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................................................2213.00303000
..........................................................................................................CGCAGTATATTTTTGTGTTTTC............................................................................................................................................2213.00300021
..................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................................................2312.00202000
..................................................................................................................................................AATCACAGGATTATACTGA.......................................................................................................1912.00201010
.........................................................ACCA------------------C----AG-A---CTATTCTTG-CGTCT..................................................................................................................................................................2212.00200020
..........................................................................................................CGCAGTATATTTTTGTGTTG..............................................................................................................................................2012.00200020
....................TC----------------------------------GACCA------------------C----AG-A---CTATTCTTG-CGT....................................................................................................................................................................2312.00200002
.....................................................................................................................................................CACAGGATTATACTGTGAGA...................................................................................................2011.00101000
....................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................................................2011.00101000
..........................................................................................................CGCAGTATATTTTTGTGTTTTAA...........................................................................................................................................2311.00100010
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2211.00101000
........................................................................................................................................TGTCAACTCAAATCACAGGATT..............................................................................................................2211.00101000
.................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................................................2111.00101000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGAA..........................................................................................................................................2411.00100010
..................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................................................2111.00100010
.................................................................................................................................................AAATCACAGGATTATACTGT.......................................................................................................2011.00101000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGAAA-........................................................................................................................................2511.00100010
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................2111.00100010
.......................................................................................................................................................CAGGATTATACTGTGAGG...................................................................................................1811.00100010
................................................................................................................................TTC-AATTTGTCAACTCAAATCACAGGATT..............................................................................................................2911.00110000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTTC-AATT....................................................................................................................................2911.00101000
...................................................................................................................................................ATCACAGGATTATACTGTG......................................................................................................1911.00101000
........................................................................................................................................TGTCAACTCAAATCACAGGATTATACT.........................................................................................................2711.00101000
..................................................................................................................................................AATCACAGGATTATACTGGA......................................................................................................2030.67200002
..................................................................................................................................................AATCACAGGATTATACTGAC......................................................................................................2020.50101000
droVir3
TAA-------------TTTGTA----------------------------------GCCAA------------------------------CGCA-TTCGATGTCTCGCAGTATACTTTTGTGTTTTGTTT-AT-TTTGAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGT----AG---CAAC---------AACAAA------AATCCATTT-----------------TAGACACAAAGC-------TTTATATGAGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................CGCAGTATACTTTTGTGTTTTG............................................................................................................................................22134514.0034514446910936736211327129168428020961971197746994533343511723272658513331179446360142393187221962663242142029711010223242632201311301122251025428956544574514297524554551411040252
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................2118519.00851963132521418654511340103391661101717883221634613704723613879359416726914311351287000000000000000000102999651623113097715167551210000
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................2215754.0057540019703120801102088533650261914690510851252204411414213364410142371011000000000000000000003113901173155700002010000000
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................1911620.001620493261354496103139130023315314592615132332141427593131653737010000000021000441093311621223013176658964808110000
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................2311157.0011570070303110400032281516613024276402093785338160114423148700000000000000000000308829221200000000300000
..................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................................................231890.0089000600010000010011110001000200000000131100000000000000000000000649436900000000000000
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................181599.0059947140151000000000100011302131231614131411210151012012001105101110100121320239523944535350013
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................201498.0049806287001001000002188125120171817310265124024522400000000000000000000101201725111000020000
..........................................................................................................CGCAGTATACTTTTGTGTTTT.............................................................................................................................................211497.0049700630735041313107561155110121243158411422724213818221130000000000000000000034903130030000000010
..................................................................................................................................................AATCACAGGATTATACTGTGAAA...................................................................................................231365.003650028000001000000000000000511000000203171000000000000000000000000019910700000000000000
...........................................................................................................GCAGTATACTTTTGTGTTTTG............................................................................................................................................211250.002500010000430200113110010000042873102100200210000000000000000000301065000171371682400000
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................221220.002200012230200010006302121247910342410109072617861000100000000000000001212100006031100000
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................221202.0020200290000000000042322001003072100160239200000000000000000000000015387000000000000000
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................201201.002010018900000100000000000000000010000000000000000000000000000000000100000000000000000
..................................................................................................................................................AATCACAGGATTATACT.........................................................................................................171175.00175000000000000000000000000000000000000000000010000000000022010002033261945000000350036
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................181174.0017400001010100000614314344119016910013042204100000000000000000000100264100410020210000
..........................................................................................................CGCAGTATACTTTTGTGTTTTT............................................................................................................................................221142.00142001000053241435138133271000002000030000210000000000000000000591300000032000000000
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................211120.001200013000000000000001000000000000000100100000000000000000000000001040000000000000000
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................22199.00990041600000000002110120030234100001002110000000000000000000000000121310000000100000
..........................................................................................................CGCAGTATACTTTTGTGTTTTGA...........................................................................................................................................23194.0094005100001000012201100010326923034021213140000000000000000000030204600000000000000
..........................................................................................................CGCAGTATACTTTTGTGTTTTGT...........................................................................................................................................23193.009301139330000000110401001361108332341222152000001000000000000000100100020002000000
..............................................................................................................GTATACTTTTGTGTTTTG............................................................................................................................................18185.0085004012121737011100000100112210000000000200000000000000000000000001000757311100000
.........................................................................................................TCGCAGTATACTTTTGTGTTTT.............................................................................................................................................22173.007300800000000002141200012121611130810241200000000000000000000000005400000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGG...................................................................................................23168.0068005000000000000000000000000000000001000000000000000000000000000352700000000000000
..................................................................................................................................................AATCACAGGATTATACTGG.......................................................................................................19167.0067105500000000000000000000000000000000000000000000000000000000001000000001000000000
........................................................GCCAA------------------------------CGCA-TTCGATGTCT..................................................................................................................................................................19154.005400600040200000001000000271134111300101001000000000000000000003000000001001000000
..................................................................................................................................................AATCACAGGATTATACTGTGAAAA..................................................................................................24153.0053005000000000000000000000000000000010000000000000000000000000000182900000000000000
.................................................................................................................................................AAATCACAGGATTATACTGTGAG....................................................................................................23153.0053006000000000001110000000004100004021110000000000000000000000004161000000000000000
.........................................................................................................TCGCAGTATACTTTTGTGTTTTG............................................................................................................................................23149.00490021011000000000000000100133031010002011000000000000000000001103000038226100000
..........................................................................................................CGCAGTATACTTTTGTGTTTTC............................................................................................................................................22144.00440022101000000012020212000000742900000001000000000000000000013000000000001000000
..........................................................................................................CGCAGTATACTTTTGTGTTT..............................................................................................................................................20143.00430040021000000011000210000023330000121002000000000000000000001200000024300200000
..................................................................................................................................................AATCACAGGATTATACTGTGAGAA..................................................................................................24137.0037001000000000000000000000000000000000000000000000000000000000000191700000000000000
..........................................................................................................CGCAGTATACTTTTGTGT................................................................................................................................................18136.00360010429000100000000000091100100001000041000000000000000000010000000000000000000
...................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................................................22134.003400150000000000100000000000021000000000000000000000000000000000033900000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTT..................................................................................................24133.003300100000000000000000000000000000000000000000000000000000000000720500000000000000
..................................................................................................................................................AATCACAGGATTATACTGC.......................................................................................................19228.005673909000000000000000000000000000000000000000000000000000000000000100000000000000
.......................................................................................................................................................CAGGATTATACTGTGAG....................................................................................................17127.00270000000000000000000000000000000000000000000000000000000000000010057400000090001
..................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................................................23125.00250060000000000014000001201020200000000000000000000000000000000042000000000000000
......................................................................................................................................................ACAGGATTATACTGTGAGT...................................................................................................19125.002500000000000000000000001001010000100101000000000000000000000000014400001000000000
..........................................................................................................CGCAGTATACTTTTGTGTTTG.............................................................................................................................................21125.00250010000000100000000000021141110100110000000000000000000000000001000002104100000
...................................................................................................................................................ATCACAGGATTATACTGTG......................................................................................................19124.002400240000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CAGTATACTTTTGTGTTTTG............................................................................................................................................20121.00210090000010000000000000000021000100003000000000000000000000000000300000100000000
..................................................................................................................................................AATCACAGGATTATACTC........................................................................................................18220.00406800000000000000000000000000000000000000011000000011000000000000000042443500000
..........................................................................................................CGCAGTATACTTTTGTGTTTTGAA..........................................................................................................................................24120.00200010100000000000000000000120000000162220000000000000000000000000001000000000001
.............................................................................................................AGTATACTTTTGTGTTTTG............................................................................................................................................19118.00180071001100000000000000002000000000001000000000000000000000001002200000000000000
........................................................................................................................................................................TTATCGGCTGT----AG---CAAC---------AAC................................................................20117.00170000000000000000000000000000000000000000000000000000000000000000010063006100000
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................21117.00174220000000000000000000000000000000001000000000000001000000000010100010001300000
..........................................................................................................CGCAGTATACTTTTGTGTT...............................................................................................................................................19116.00160051000000000010010000110010010000100100000000000000000000020000000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTTT.................................................................................................25116.001600000000000000000000000000000000000000000000000000000000000000412000000000000000
...........................................................................................................GCAGTATACTTTTGTGTTTT.............................................................................................................................................20116.00160090010000000000010000000001000101002000000000000000000000000000000000000000000
......................................................................................................................................................ACAGGATTATACTGTGA.....................................................................................................17114.001400000000000000000000000000000000000000000000000000000000000010001201000000000000
..........................................................................................................CGCAGTATACTTTTGTGTTTTGAAA-........................................................................................................................................25114.00140000000000002200000000000010000010001000000000000000000000020001001100000000011
.....................................................................................................................................................CACAGGATTATACTGTGAG....................................................................................................19114.00140050000000000000300000004101000000000000000000000000000000000000000000000000000
..........................................................................................................CGCAGTATACTTTTGTGTTTTA............................................................................................................................................22114.00140000100000000010000000011012010000100000000000000000000000010001000001020000000
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................21114.00140000000000000011010100000110100000000001000000000000000000003030000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTC..................................................................................................24114.00140000000000000010000100100000000000000001000000000000000000000142300000000000000
..........................................................................................................CGCAGTATACTTTTGTGTTTTGTC..........................................................................................................................................24113.00130000000000000000000000000000010200000020000000000000000000000040000011000200000
..........................................................................................................CGCAGTATACTTTTGTGTTTTAA...........................................................................................................................................23111.00110000000000000000000000000020010020201000000000000000000000000003000000000000000
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................18111.001100110000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................................................19111.001100100000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTCC.....................................................................................................21111.00110040000000000000000010010001100100000010000000000000000000000000000000000000001
.....................A----------------------------------GCCAA------------------------------CGCA-TTCGATGTCT..................................................................................................................................................................20110.00100000000000000000000000001032000000000000000000000000000000000000000000103000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTA..................................................................................................24110.00100010000000000000000000000010000000000000000000000000000000000006200000000000000
..................................................................................................................................................AATCACAGGATTATACTGTA......................................................................................................20110.00100110000000000000000000000001000010001100000000000000000000000000000000000400000
....................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................................................2019.0090050000000000000000000000000000000000000000000000000000000000040000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................................................2119.0090000000000000000010002110000000000000001000000000000000000000030000000000000000
..................................................................................................................................................AATCACAGGATTATACTGA.......................................................................................................1919.0090020001000000000000000000010000010001001000000000000000000000000001000000010000
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2219.0090060000000000000000000000021000000000000000000000000000000000000000000000000000
......................................................................................................................................................ACAGGATTATACTGTGAGA...................................................................................................1919.0090010000000000000000000001000000000000000000000000000000000000003100100000020000
...............................................................................................................................................TCAAATCACAGGATTATACTGT.......................................................................................................2219.0090000000000000000000100000001000000000000000000000000000000000000000020010400000
.......................................................................................................................................................CAGGATTATACTGTGAGA...................................................................................................1818.0081001000000000000001000000000000000010000000000000000000000000000012100000000000
..........................................................................................................CGCAGTATACTTTTGTGTTTTGC...........................................................................................................................................2317.0070030100000000000000000010000000000000000000000000000000000000002000000000000000
.................TTGTA----------------------------------GCCAA------------------------------CGCA-TTCGATGTCT..................................................................................................................................................................2417.0070000001000000000000000000000000000000000000000100000000000000000100000202000000
...............................................................................................................................................TCAAATCACAGGATTATACTG........................................................................................................2117.0070100000000000000000000000000001000000000000000000000000000000000002012000000000
.....................................................................................................................................................CACAGGATTATACTGTGA.....................................................................................................1817.0070120000000000000000000000000000000000000000000000000000000000000000003000100000
.........................................................................................................TCGCAGTATACTTTTGTGTTT..............................................................................................................................................2117.0070000020000000000000000000010012100000000000000000000000000000000000000000000000
..........................................................................................................CGCAGTATACTTTTGTGTTTTCC...........................................................................................................................................2315.0050000000000000000000100000000011000000000000000000000000000001100000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTT......................................................................................................2015.0050010000000000010101000000000000000000000000000000000000000001000000000000000000
.................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................................................2115.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAAG...................................................................................................2314.0040000000000000000000000000010000000000000000000000000000000000003000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTTA.................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000003100000000000000
..........................................................................................................CGCAGTATACTTTTGTGTTTTGTT..........................................................................................................................................2414.0040000000000000000000000001001001000000000000000000000000000000010000000000000000
...................................................................................................................................................ATCACAGGATTATACTGTGAA....................................................................................................2114.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................ACAGGATTATACTGTGAA....................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000400000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTCCA................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000040000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTCT.................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000004000000000000000
.................................................................................................................................................AAATCACAGGATTATACTGTGAGT...................................................................................................2414.0040000000000000000000000001001000010000000000000000000000000000010000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTTAAA...............................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000004000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGCA..................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000400000000000000
......................................................................................................................................................ACAGGATTATACTGTGAAA...................................................................................................1923.5070000000000000001000000000000000000000000000000000000000000000004200000000000000
.........................................................................................................TCGCAGTATACTTTTGTGTTTTC............................................................................................................................................2313.0030000000000000000000000000010000000000000000000000000000000000000200000000000000
.................................................................................................................................................AAATCACAGGATTATACTGTGAA....................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000003000000000000000
........................................................................................................................................................AGGATTATACTGTGAG....................................................................................................1613.0030000000000000000000000000000000000000000000000000000000030000000000000000000000
.........................................................................................................TCGCAGTATACTTTTGTGTTTTT............................................................................................................................................2313.0030000000000000000000001000001000000000010000000000000000000000000000000000000000
..........................................................................................................CGCAGTATACTTTTGTGTTTTTG...........................................................................................................................................2313.0030000000000000000000000000000001000000000000000000000000000000000000001100000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGGA..................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000001200000000000000
...................................................................................................................................................ATCACAGGATTATACTGTGAGC...................................................................................................2213.0030001000000000000000000000000000000020000000000000000000000000000000000000000000
....................................................................................................................................................TCACAGGATTATACT.........................................................................................................1513.0030000000000000000000000000000000000000000000000000000000111000000000000000000000
...........................................................................................................GCAGTATACTTTTGTGTTTTC............................................................................................................................................2113.0030020000000000000000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTTAA................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000002100000000000000
..................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................................................2213.0030020000000000000010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................AGGATTATACTGTGAGA...................................................................................................1722.5050000000000000000000000000000000000000000000000000000000000000000000100000030001
..................TGTA----------------------------------GCCAA------------------------------CGCA-TTCGATGT....................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000200000000000000
.................................................................................................................................................AAATCACAGGATTATACTGTGAGA...................................................................................................2412.0020010000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................TCGCAGTATACTTTTGTGTTTTAA...........................................................................................................................................2412.0020000000000000000000000000000000000001000000000000000000000010000000000000000000
....................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
GAT-------------TTTAAT----------------------------------T------T------------GAATTATTTG-A--ACACA-TTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTT-AT-TATAAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGA----AA---CAAC---------AACAAA-----------------------------TTG---------------------AATTAAAASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................2115405.005405260416381116241526
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................2211392.00139225338811916753412
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................191950.00950667484942081
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................201201.0020118237090
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................221179.00179136213352
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................201127.0012712500020
..........................................................................................................CGCAGTATATTTTTGTGTTTTT............................................................................................................................................22151.005102123700
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................18140.00404000000
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................22137.00378000290
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................21132.00322420015
..................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................................................22127.00272200050
..................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................................................23126.00262400020
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................21120.0020485111
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................22118.00181210050
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................18116.00161014100
..................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................................................23113.0013700060
..........................................................................................................CGCAGTATATTTTTGTGTTT..............................................................................................................................................20111.0011312014
..................................................................................................................................................AATCACAGGATTATACTGC.......................................................................................................19110.0010001180
.....................................................................................................................................................CACAGGATTATACTGTGAG....................................................................................................1919.009900000
....................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................................................1919.009900000
..................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................................................2318.008600110
..........................................................................................................CGCAGTATATTTTTGTGTT...............................................................................................................................................1918.008100205
..................................................................................................................................................AATCACAGGATTATACTGTGAAA...................................................................................................2317.007700000
....................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................................................2017.007700000
...................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................................................2217.007700000
...................................................................................................................................................ATCACAGGATTATACTGTG......................................................................................................1917.007700000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGT...........................................................................................................................................2315.005120002
..................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................................................2115.005101210
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................1815.005500000
............................................................................................................CAGTATATTTTTGTGTTTTG............................................................................................................................................2014.004300010
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2214.004400000
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................2114.004400000
..................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................................................2114.004120100
..................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................................................2214.004000040
..........................................................................................................CGCAGTATATTTTTGTGTTTTGC...........................................................................................................................................2314.004300001
..................................................................................................................................................AATCACAGGATTATACTGA.......................................................................................................1914.004400000
..................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................................................2113.003100020
..........................................................................................................CGCAGTATATTTTTGTGT................................................................................................................................................1813.003001101
.....................................................................................................................................................CACAGGATTATACTGTGA.....................................................................................................1813.003300000
..........................................................................................................CGCAGTATATTTTTGTGTTTC.............................................................................................................................................2113.003110001
..........................................................................................................CGCAGTATATTTTTGTGTTTCC............................................................................................................................................2213.003000012
..........................................................................................................CGCAGTATATTTTTGTGTTTTGA...........................................................................................................................................2312.002100001
..................................................................................................................................................AATCACAGGATTATACTCC.......................................................................................................1912.002200000
..............................................................................................................................................ATCAAATCACAGGATTATACTGTGA.....................................................................................................2512.002000020
..................................................................................................................................................AATCACAGGATTATACTGG.......................................................................................................1912.002001100
...................................................................................................................................................ATCACAGGATTATACTGTGAGC...................................................................................................2212.002200000
.........................................................................................................TCGCAGTATATTTTTGTGTTTT.............................................................................................................................................2212.002101000
......................................................................................................................................................ACAGGATTATACTGTGAGA...................................................................................................1912.002200000
..................................................................................................................................................AATCACAGGATTATACTGTA......................................................................................................2012.002100010
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTC..........................................................................................................................................2412.002000002
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................1812.002100001
....................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................................................2112.002100010
................................................................................................................................................CAAATCACAGGATTATACTGTGA.....................................................................................................2311.001000010
...........................................................................................................GCAGTATATTTTTGTGTTTTC............................................................................................................................................2111.001100000
...........................................................................................................GCAGTATATTTTTGTGTTT..............................................................................................................................................1911.001100000
..................................................................................................................................................AATCACAGGATTATACTGTGAGTC..................................................................................................2411.001100000
..............................................................................................................................................ATCAAATCACAGGATTATACTGTGG.....................................................................................................2511.001000010
........................................................................................................................................................AGGATTATACTGTGAGTT..................................................................................................1811.001100000
...................................................................................TTG-A--ACACA-TTCGATGTCT..................................................................................................................................................................1911.001000010
..........................................................................................................CGCAGTATATTTTTGTGTTTTA............................................................................................................................................2211.001010000
..........................................................................................................CGCAGTATATTTTTGTGTTTTC............................................................................................................................................2211.001100000
....................................................................................................................................................TCACAGGATTATACTGTG......................................................................................................1811.001100000
..................................................................................TTTG-A--ACACA-TTCGATGTCT..................................................................................................................................................................2011.001000010
..................................................................................................................................................AATCACAGGATTATACTAC.......................................................................................................1921.002000020
....................................................................................................................................................TCACAGGATTATACTGTGAGT...................................................................................................2111.001100000
..................................................................................................................................................AATCACAGGATTATACTA........................................................................................................1811.001100000
..................................................................................................................................................AATCACAGGATTATACTGTGTA....................................................................................................2211.001001000
..................................................................................................................................................AATCACAGGATTATACTGTGAGCC..................................................................................................2411.001100000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGG...........................................................................................................................................2311.001100000
.................................................................................................................................................AAATCACAGGATTATACTGTGAG....................................................................................................2311.001100000
...........................................................................................................GCAGTATATTTTTGTGTTTTGTTT-........................................................................................................................................2411.001100000
..........................................................................................................CGCAGTATATTTTTGTGTTTTGCC..........................................................................................................................................2411.001010000
...................................................................................................................................................ATCACAGGATTATACTGTGAGAA..................................................................................................2311.001100000
..................................................................................................................................................AATCACAGGATTATACTGTT......................................................................................................2011.001000100
..................................................................................................................................................AATCACAGGATTATACTGTGAAAA..................................................................................................2411.001100000
....................................................................................TG-A--ACACA-TTCGATGTCT..................................................................................................................................................................1811.001000010
.........................................................................................................TCGCAGTATATTTTTGTGTTTTG............................................................................................................................................2311.001100000
..........................................................................................................CGCAGTATATTTTTGTGTC...............................................................................................................................................1911.001000001
..........................................................................................................CGCAGTATATTTTTGTGTTC..............................................................................................................................................2011.001000001
..................................................................................................................................................AATCACAGGATTATACTTC.......................................................................................................1921.002100010
.........................................................................................................TCGCAGTATATTTTTGTGTTT..............................................................................................................................................2111.001010000
.......................................................................................................................................................CAGGATTATACTGTGAGA...................................................................................................1811.001100000
.......................................................................................................................................................CAGGATTATACTGTGAGT...................................................................................................1811.001100000
.............................................................................AATTATTTG-A--ACACA-TTCGATGTCT..................................................................................................................................................................2511.001000010
.......................................................................................................................................................CAGGATTATACTGTGAGC...................................................................................................1811.001100000
.................................................................................................................................................AAATCACAGGATTATACTGT.......................................................................................................2011.001100000
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................1911.001100000
..........................................................................................................CGCAGTATATTTTTGTGTTTTCC...........................................................................................................................................2311.001100000
.....................................................................................................................................................CACAGGATTATACTGTGAGA...................................................................................................2011.001100000
.....................................................................................................................................................CACAGGATTATACTGTGAC....................................................................................................1911.001000010
..........................................................................................................CGCAGTATATTTTTGTGTTTTGTT..........................................................................................................................................2411.001100000
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................2011.001100000
droGri2
TGT-------------TTTCAATTTGATATACATATATAGATAGATCTGTTAAGCCCAC--------------------------------CAC-TGTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTTATT-TTTGAAAATCAAATCACAGGATTATACTGTGAGTTATC----------GC---CAGCAGCAAGGACAACCAA---------------------------ATTTT---------------------AAT----TSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................................................211155.001551532
..........................................................................................................CGCAGTATATTTTTGTGTTTTG............................................................................................................................................221142.001426181
..................................................................................................................................................AATCACAGGATTATACTGTG......................................................................................................20120.0020200
..................................................................................................................................................AATCACAGGATTATACTGT.......................................................................................................19119.0019145
...........................................................................................................GCAGTATATTTTTGTGTTTTG............................................................................................................................................2119.00981
...................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................................................2017.00770
..........................................................................................................CGCAGTATATTTTTGTGTTTT.............................................................................................................................................2117.00743
..................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................................................2213.00330
...........................................................................................................GCAGTATATTTTTGTGTTTT.............................................................................................................................................2013.00330
..................................................................................................................................................AATCACAGGATTATACTG........................................................................................................1813.00330
..................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................................................2221.50330
...................................................................................................................................................ATCACAGGATTATACTGTG......................................................................................................1911.00110
......................................................CCCAC--------------------------------CAC-TGTCGATGTCT..................................................................................................................................................................1911.00110
.............................................................................................................AGTATATTTTTGTGTTTTG............................................................................................................................................1911.00110
...................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................................................2111.00110
.................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................................................2211.00110
...................................................................................................................................................ATCACAGGATTATACTGT.......................................................................................................1811.00110
......................................................................................................................................................ACAGGATTATACTGTGAG....................................................................................................1811.00110
...................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................................................2211.00110
..................................................................................................................................................AATCACAGGATTATACTGTGATA...................................................................................................2320.50110
..............................................................................................................GTATATTTTTGTGTTTTG............................................................................................................................................1820.50110

Generated: 10/20/2015 at 07:31 PM