ID:

dya-mir-286

 Coordinate:

2R:13623763-13623860 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.2 -28.7 -28.7

Flybase annnotation

utr3 [utr3_minus_3618]; pre_miRNA [Dyak\mir-286-RM]; miRNA [Dyak\miR-286-RA]

No Repeatable elements found

Sense Strand Reads

AATCAACAGTAATGCAAAAGAGAAGAGTAAGTGTTATAGGCACTCCAGTTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAAAGAGGTTTCGATCAAGCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCAGTGAAGTTGCAAGTGAAATTAATCAGATACTGGGG

***********************************************((((((((((((....((((.(((((((.(((((.((((.......((....))........)))).))))).)))).))).))))....))))))))))))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M056

embryo

 V046

embryo

 M026

head

 M043

female body

 V058

head

 V052

head

 V120

male body		 SRR1275484

Male prepupae
.................................................................................................................TGACTAGACCGAACACTCGTGCT.............................................................. 23 0 1 1113308.00 1113308 1002770 109753 410 191 107 72 4 1
.................................................................................................................TTACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 269401.00 269401 269390 11 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGCC.............................................................. 23 1 1 264917.00 264917 264606 234 77 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 69710.00 69710 69710 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGC............................................................... 22 0 1 56464.00 56464 52234 4154 57 12 3 4 0 0
.................................................................................................................TGATTAGACCGAACACTCGTGCT.............................................................. 23 1 1 43101.00 43101 43064 37 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGC............................................................... 22 1 1 13712.00 13712 13712 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGCTT............................................................. 24 1 1 12894.00 12894 12291 594 4 1 3 1 0 0
.................................................................................................................TGATTAGACCGAACACTCGTGCC.............................................................. 23 2 1 11061.00 11061 11061 0 0 0 0 0 0 0
.................................................................................................................TTATTAGACCGAACACTCGTGCT.............................................................. 23 2 1 8746.00 8746 8746 0 0 0 0 0 0 0
.................................................................................................................TGCCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 5311.00 5311 5286 25 0 0 0 0 0 0
.................................................................................................................TAACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 5087.00 5087 5021 66 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGAC.............................................................. 23 2 1 4780.00 4780 4776 3 1 0 0 0 0 0
.................................................................................................................TGACTAGACCGACCACTCGTGCT.............................................................. 23 1 1 4621.00 4621 4475 145 0 0 1 0 0 0
.................................................................................................................TCACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 4265.00 4265 4242 23 0 0 0 0 0 0
.................................................................................................................TGACTAGCCCGAACACTCGTGCT.............................................................. 23 1 1 3410.00 3410 3359 51 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGCTT............................................................. 24 2 1 3287.00 3287 3287 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGAT.............................................................. 23 1 1 2875.00 2875 2744 130 0 1 0 0 0 0
.................................................................................................................TGACTATACCGAACACTCGTGCT.............................................................. 23 1 1 2594.00 2594 2569 25 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACATTCGTGCT.............................................................. 23 1 1 2449.00 2449 2423 25 0 0 1 0 0 0
.................................................................................................................TGACTAGACCGAACCCTCGTGCT.............................................................. 23 1 1 2376.00 2376 2173 202 0 0 1 0 0 0
.................................................................................................................TGACTAGACCAAACACTCGTGCT.............................................................. 23 1 1 2302.00 2302 2229 73 0 0 0 0 0 0
.................................................................................................................TGATTAGACCGAACACTCGTGC............................................................... 22 1 1 2275.00 2275 2272 3 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGGGCT.............................................................. 23 1 1 2234.00 2234 2095 137 2 0 0 0 0 0
.................................................................................................................TTATTAGACCGAACACTCGTGCC.............................................................. 23 3 1 2198.00 2198 2198 0 0 0 0 0 0 0
.................................................................................................................TGACTGGACCGAACACTCGTGCT.............................................................. 23 1 1 2184.00 2184 2092 92 0 0 0 0 0 0
..............................................................GGCGAATGTCGGTATGGTCTCT.................................................................................................................. 22 0 1 2118.00 2118 2088 27 2 1 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCTTGCT.............................................................. 23 1 1 2101.00 2101 2081 20 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGCACACTCGTGCT.............................................................. 23 1 1 1878.00 1878 463 1409 0 0 3 3 0 0
.................................................................................................................TTACTAGCCCGAACACTCGTGCT.............................................................. 23 2 1 1837.00 1837 1835 2 0 0 0 0 0 0
.................................................................................................................CGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 1795.00 1795 1663 131 0 1 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGCG.............................................................. 23 1 1 1773.00 1773 1702 54 15 0 1 1 0 0
.................................................................................................................TGACTAGACCGAACACTCGCGCT.............................................................. 23 1 1 1756.00 1756 1349 404 1 0 1 1 0 0
.................................................................................................................TTACTAGACCGACCACTCGTGCT.............................................................. 23 2 1 1731.00 1731 1728 3 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTTCT.............................................................. 23 1 1 1652.00 1652 1608 43 0 0 1 0 0 0
.................................................................................................................GGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 1552.00 1552 1505 46 0 1 0 0 0 0
.................................................................................................................TGACTAGACTGAACACTCGTGCT.............................................................. 23 1 1 1512.00 1512 1373 139 0 0 0 0 0 0
.................................................................................................................TGCCTAGACCGAACACTCGTGCC.............................................................. 23 2 1 1475.00 1475 1473 2 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGCTC............................................................. 24 1 1 1451.00 1451 1425 25 0 0 1 0 0 0
.................................................................................................................TGACTAGAACGAACACTCGTGCT.............................................................. 23 1 1 1440.00 1440 1237 199 0 4 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGAC.............................................................. 23 3 1 1396.00 1396 1396 0 0 0 0 0 0 0
................................................................................................................CTGACTAGACCGAACACTCGTGCT.............................................................. 24 1 1 1342.00 1342 1274 66 2 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTTGTGCT.............................................................. 23 1 1 1250.00 1250 1157 92 1 0 0 0 0 0
.................................................................................................................TAACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 1204.00 1204 1204 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGACCACTCGTGCC.............................................................. 23 2 1 1143.00 1143 1140 3 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGTT.............................................................. 23 1 1 1121.00 1121 986 132 0 0 1 2 0 0
.................................................................................................................TCACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 1110.00 1110 1110 0 0 0 0 0 0 0
.................................................................................................................GTACTAGACCGAACACTCGTGCT.............................................................. 23 2 1 1099.00 1099 1099 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGT............................................................... 22 1 1 1083.00 1083 788 294 1 0 0 0 0 0
.................................................................................................................TTACTATACCGAACACTCGTGCT.............................................................. 23 2 1 1081.00 1081 1081 0 0 0 0 0 0 0
.................................................................................................................TTCCTAGACCGAACACTCGTGCT.............................................................. 23 2 1 1052.00 1052 1052 0 0 0 0 0 0 0
.................................................................................................................CTACTAGACCGAACACTCGTGCT.............................................................. 23 2 1 1049.00 1049 1046 3 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGAT.............................................................. 23 2 1 1028.00 1028 1028 0 0 0 0 0 0 0
.................................................................................................................AGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 974.00 974 935 38 0 1 0 0 0 0
.................................................................................................................TGACTAGACCGAATACTCGTGCT.............................................................. 23 1 1 943.00 943 884 59 0 0 0 0 0 0
.................................................................................................................TGGCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 931.00 931 780 150 0 0 0 1 0 0
.................................................................................................................TGACTAGGCCGAACACTCGTGCT.............................................................. 23 1 1 910.00 910 776 133 1 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTG................................................................ 21 0 1 892.00 892 673 211 3 3 1 1 0 0
.................................................................................................................TGACTAGACCGAACACTCGAGCT.............................................................. 23 1 1 866.00 866 751 113 1 0 1 0 0 0
.................................................................................................................TGACTAGCCCGAACACTCGTGCC.............................................................. 23 2 1 864.00 864 864 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAGCACTCGTGCT.............................................................. 23 1 1 857.00 857 678 178 0 0 0 1 0 0
.................................................................................................................TGACTAGACCGAACACCCGTGCT.............................................................. 23 1 1 809.00 809 648 159 1 0 1 0 0 0
.................................................................................................................TTACTAGACCGAACACTCTTGCT.............................................................. 23 2 1 805.00 805 804 1 0 0 0 0 0 0
.................................................................................................................ATACTAGACCGAACACTCGTGCT.............................................................. 23 2 1 800.00 800 800 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTCCT.............................................................. 23 1 1 741.00 741 708 32 0 0 1 0 0 0
.................................................................................................................TTACTAGACTGAACACTCGTGCT.............................................................. 23 2 1 720.00 720 720 0 0 0 0 0 0 0
.................................................................................................................TGACTATACCGAACACTCGTGCC.............................................................. 23 2 1 716.00 716 715 1 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACCCTCGTGCT.............................................................. 23 2 1 713.00 713 712 1 0 0 0 0 0 0
..............................................................GGCGAATGTCGGTATGGTCTCC.................................................................................................................. 22 1 1 709.00 709 709 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACATTCGTGCT.............................................................. 23 2 1 650.00 650 650 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCTTGCC.............................................................. 23 2 1 616.00 616 616 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACATTCGTGCC.............................................................. 23 2 1 605.00 605 604 1 0 0 0 0 0 0
.................................................................................................................TGACTTGACCGAACACTCGTGCT.............................................................. 23 1 1 604.00 604 587 17 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGCG.............................................................. 23 2 1 596.00 596 595 1 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTACT.............................................................. 23 1 1 594.00 594 519 75 0 0 0 0 0 0
.................................................................................................................TGACTGGACCGAACACTCGTGCC.............................................................. 23 2 1 589.00 589 589 0 0 0 0 0 0 0
.................................................................................................................TGATTAGACCGAACACTCGTGCTT............................................................. 24 2 1 585.00 585 585 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCATGCT.............................................................. 23 1 1 578.00 578 492 86 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGGACACTCGTGCT.............................................................. 23 1 1 570.00 570 284 286 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACGCGTGCT.............................................................. 23 1 1 567.00 567 378 188 0 0 0 1 0 0
..............................................................GTCGAATGTCGGTATGGTCTCT.................................................................................................................. 22 1 1 555.00 555 555 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACCCTCGTGCC.............................................................. 23 2 1 550.00 550 550 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGGGCT.............................................................. 23 2 1 545.00 545 545 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCAAACACTCGTGCT.............................................................. 23 2 1 538.00 538 538 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGCTA............................................................. 24 0 1 530.00 530 464 65 1 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACGCTCGTGCT.............................................................. 23 1 1 522.00 522 409 113 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGGGCC.............................................................. 23 2 1 522.00 522 520 2 0 0 0 0 0 0
.................................................................................................................TGACCAGACCGAACACTCGTGCT.............................................................. 23 1 1 512.00 512 441 71 0 0 0 0 0 0
.................................................................................................................TTACTAGCCCGAACACTCGTGCC.............................................................. 23 3 1 479.00 479 479 0 0 0 0 0 0 0
..................................................................................................................GACTAGACCGAACACTCGTGCT.............................................................. 22 0 1 468.00 468 416 42 0 9 1 0 0 0
.................................................................................................................TGACTAGACCAAACACTCGTGCC.............................................................. 23 2 1 459.00 459 459 0 0 0 0 0 0 0
.................................................................................................................CGACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 457.00 457 457 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGACCACTCGTGCC.............................................................. 23 3 1 455.00 455 455 0 0 0 0 0 0 0
.................................................................................................................GGACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 428.00 428 427 1 0 0 0 0 0 0
.................................................................................................................TTATTAGACCGAACACTCGTGC............................................................... 22 2 1 423.00 423 423 0 0 0 0 0 0 0
.................................................................................................................TGACTAGATCGAACACTCGTGCT.............................................................. 23 1 1 417.00 417 344 71 0 2 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTTCC.............................................................. 23 2 1 400.00 400 400 0 0 0 0 0 0 0
.................................................................................................................TGATTATACCGAACACTCGTGCT.............................................................. 23 2 1 391.00 391 391 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTTGTGCT.............................................................. 23 2 1 388.00 388 388 0 0 0 0 0 0 0
.................................................................................................................TGACTAAACCGAACACTCGTGCT.............................................................. 23 1 1 386.00 386 343 43 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTTCT.............................................................. 23 2 1 384.00 384 383 1 0 0 0 0 0 0
.................................................................................................................TGACTAGACCCAACACTCGTGCT.............................................................. 23 1 1 383.00 383 291 92 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGCGCC.............................................................. 23 2 1 375.00 375 370 5 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGCGCT.............................................................. 23 2 1 375.00 375 375 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGCTC............................................................. 24 2 1 373.00 373 372 1 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTAC............................................................... 22 1 1 363.00 363 359 3 1 0 0 0 0 0
.................................................................................................................TGACTAGACTGAACACTCGTGCC.............................................................. 23 2 1 350.00 350 348 2 0 0 0 0 0 0
.................................................................................................................TGACTACACCGAACACTCGTGCT.............................................................. 23 1 1 347.00 347 330 17 0 0 0 0 0 0
.................................................................................................................TGCTTAGACCGAACACTCGTGCT.............................................................. 23 2 1 329.00 329 329 0 0 0 0 0 0 0
.................................................................................................................TGACTAGAACGAACACTCGTGCC.............................................................. 23 2 1 329.00 329 326 3 0 0 0 0 0 0
................................................................................................................CTGACTAGACCGAACACTCGTGCC.............................................................. 24 2 1 322.00 322 322 0 0 0 0 0 0 0
.................................................................................................................TGCCTAGACCGAACACTCGTGC............................................................... 22 1 1 313.00 313 313 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGTT.............................................................. 23 2 1 306.00 306 306 0 0 0 0 0 0 0
.................................................................................................................TGACTAGCCCGAACACGCGTGCT.............................................................. 23 2 1 300.00 300 300 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACAATCGTGCT.............................................................. 23 1 1 299.00 299 42 257 0 0 0 0 0 0
.................................................................................................................GTACTAGACCGAACACTCGTGCC.............................................................. 23 3 1 297.00 297 297 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGACCACTCGTGAT.............................................................. 23 2 1 287.00 287 284 3 0 0 0 0 0 0
.................................................................................................................TTACTAGAACGAACACTCGTGCT.............................................................. 23 2 1 287.00 287 287 0 0 0 0 0 0 0
.................................................................................................................TGACAAGACCGAACACTCGTGCT.............................................................. 23 1 1 281.00 281 268 13 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTAGTGCT.............................................................. 23 1 1 280.00 280 115 164 0 0 1 0 0 0
.................................................................................................................TTCCTAGACCGAACACTCGTGCC.............................................................. 23 3 1 271.00 271 271 0 0 0 0 0 0 0
.................................................................................................................TTACTGGACCGAACACTCGTGCT.............................................................. 23 2 1 271.00 271 270 1 0 0 0 0 0 0
.................................................................................................................TTACTATACCGAACACTCGTGCC.............................................................. 23 3 1 270.00 270 270 0 0 0 0 0 0 0
.................................................................................................................TAACTAGACCGAACACTCGTGC............................................................... 22 1 1 270.00 270 268 2 0 0 0 0 0 0
.................................................................................................................TGATTAGCCCGAACACTCGTGCT.............................................................. 23 2 1 265.00 265 265 0 0 0 0 0 0 0
.................................................................................................................AGACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 261.00 261 260 1 0 0 0 0 0 0
.................................................................................................................CTACTAGACCGAACACTCGTGCC.............................................................. 23 3 1 258.00 258 258 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACGCGTGAT.............................................................. 23 2 1 257.00 257 253 4 0 0 0 0 0 0
.................................................................................................................TGACTAGCCCGAACACTCGTGAT.............................................................. 23 2 1 249.00 249 248 1 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTTGTGCC.............................................................. 23 2 1 248.00 248 248 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCCTGCT.............................................................. 23 1 1 245.00 245 205 39 0 0 0 1 0 0
.................................................................................................................TTACTAGACCGAACACTCGAGCT.............................................................. 23 2 1 236.00 236 236 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGAGCC.............................................................. 23 2 1 229.00 229 229 0 0 0 0 0 0 0
.................................................................................................................TCACTAGACCGAACACTCGTGC............................................................... 22 1 1 227.00 227 226 1 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACACGTGCT.............................................................. 23 1 1 227.00 227 138 89 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCTTGCC.............................................................. 23 3 1 225.00 225 225 0 0 0 0 0 0 0
.................................................................................................................TGATTAGACCGAACACTCGTGAC.............................................................. 23 3 1 224.00 224 224 0 0 0 0 0 0 0
.................................................................................................................TTACTAGGCCGAACACTCGTGCT.............................................................. 23 2 1 223.00 223 223 0 0 0 0 0 0 0
.................................................................................................................TGATTAGACCGAACACTCTTGCT.............................................................. 23 2 1 222.00 222 222 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAAAACTCGTGCT.............................................................. 23 1 1 219.00 219 126 93 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGACCACTCGTGC............................................................... 22 1 1 217.00 217 215 2 0 0 0 0 0 0
.................................................................................................................TGGCTAGACCGAACACTCGTGCC.............................................................. 23 2 1 217.00 217 217 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACAGAACACTCGTGCT.............................................................. 23 1 1 216.00 216 133 83 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGTC.............................................................. 23 2 1 213.00 213 212 1 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGA............................................................... 22 1 1 203.00 203 195 8 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAATACTCGTGCC.............................................................. 23 2 1 202.00 202 202 0 0 0 0 0 0 0
.................................................................................................................TGACTAGGCCGAACACTCGTGCC.............................................................. 23 2 1 199.00 199 199 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGTACACTCGTGCT.............................................................. 23 1 1 198.00 198 31 167 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGACCCCTCGTGCT.............................................................. 23 2 1 198.00 198 184 14 0 0 0 0 0 0
..............................................................GTCGAATGTCGGTATGGTCTCC.................................................................................................................. 22 2 1 198.00 198 198 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAATACTCGTGCT.............................................................. 23 2 1 197.00 197 197 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACTGAACACTCGTGCC.............................................................. 23 3 1 197.00 197 197 0 0 0 0 0 0 0
.................................................................................................................TGATTAGACCGAACACTCGTGCG.............................................................. 23 2 1 196.00 196 196 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCG.................................................................. 19 0 1 195.00 195 189 2 4 0 0 0 0 0
.................................................................................................................TGACTAGACCGACCACTCGTTCT.............................................................. 23 2 1 188.00 188 187 1 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGT............................................................... 22 2 1 187.00 187 187 0 0 0 0 0 0 0
.................................................................................................................ATACTAGACCGAACACTCGTGCC.............................................................. 23 3 1 187.00 187 187 0 0 0 0 0 0 0
.................................................................................................................TGACTAGCCCGAACACTCGTGC............................................................... 22 1 1 185.00 185 183 2 0 0 0 0 0 0
................................................................................................................CGGACTAGACCGAACACTCGTGCT.............................................................. 24 2 1 184.00 184 184 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACCCTCGTGCC.............................................................. 23 3 1 183.00 183 183 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTG................................................................ 21 1 1 183.00 183 183 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGGT.............................................................. 23 1 1 178.00 178 132 45 0 1 0 0 0 0
.................................................................................................................TGACGAGACCGAACACTCGTGCT.............................................................. 23 1 1 176.00 176 161 14 0 0 1 0 0 0
.................................................................................................................TTACTAGACCGAACATTCGTGCC.............................................................. 23 3 1 176.00 176 176 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACCCGTGCT.............................................................. 23 2 1 175.00 175 175 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAGCACTCGTGCC.............................................................. 23 2 1 175.00 175 175 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAGCACTCGTGCT.............................................................. 23 2 1 175.00 175 175 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTCCC.............................................................. 23 2 1 172.00 172 172 0 0 0 0 0 0 0
.................................................................................................................TTGCTAGACCGAACACTCGTGCT.............................................................. 23 2 1 171.00 171 170 1 0 0 0 0 0 0
.................................................................................................................TGACTTGACCGAACACTCGTGCC.............................................................. 23 2 1 171.00 171 170 1 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGCACACTCGTGCT.............................................................. 23 2 1 170.00 170 168 2 0 0 0 0 0 0
..............................................................GGCGAATGTCGGTATGGTCTC................................................................................................................... 21 0 1 169.00 169 165 4 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGCA.............................................................. 23 1 1 168.00 168 146 19 0 2 0 1 0 0
.................................................................................................................TTACTAGACCGAACACTCGTCCT.............................................................. 23 2 1 166.00 166 166 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACCCGTGCC.............................................................. 23 2 1 151.00 151 150 1 0 0 0 0 0 0
.................................................................................................................TTACTAGACCAAACACTCGTGCC.............................................................. 23 3 1 150.00 150 150 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGGGCC.............................................................. 23 3 1 149.00 149 149 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGATCACTCGTGCT.............................................................. 23 1 1 147.00 147 47 100 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTACT.............................................................. 23 2 1 147.00 147 147 0 0 0 0 0 0 0
.................................................................................................................TGACTATACCGAACACTCGTGC............................................................... 22 1 1 144.00 144 144 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTGGTGCT.............................................................. 23 1 1 142.00 142 126 16 0 0 0 0 0 0
................................................................................................................GTGACTAGACCGAACACTCGTGCT.............................................................. 24 0 1 136.00 136 134 2 0 0 0 0 0 0
.................................................................................................................TGATTAGAACGAACACTCGTGCT.............................................................. 23 2 1 136.00 136 136 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACATTCGTGC............................................................... 22 1 1 134.00 134 132 2 0 0 0 0 0 0
.................................................................................................................TGACTAGACCTAACACTCGTGCT.............................................................. 23 1 1 134.00 134 119 15 0 0 0 0 0 0
.................................................................................................................TGACCAGACCGAACACTCGTGCC.............................................................. 23 2 1 133.00 133 133 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCATGCT.............................................................. 23 2 1 130.00 130 130 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGCTA............................................................. 24 1 1 129.00 129 129 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACGCTCGTGCC.............................................................. 23 2 1 129.00 129 129 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCATGCC.............................................................. 23 2 1 126.00 126 126 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCAAACACTCGTGC............................................................... 22 1 1 124.00 124 118 6 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTACC.............................................................. 23 2 1 121.00 121 121 0 0 0 0 0 0 0
.................................................................................................................TTACCAGACCGAACACTCGTGCT.............................................................. 23 2 1 120.00 120 120 0 0 0 0 0 0 0
.................................................................................................................TGATTAGACCGACCACTCGTGCT.............................................................. 23 2 1 119.00 119 117 2 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGT................................................................. 20 0 1 118.00 118 87 30 1 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTTGTGCC.............................................................. 23 3 1 117.00 117 117 0 0 0 0 0 0 0
.................................................................................................................TGATTAGACCGAACACTCGTGAT.............................................................. 23 2 1 116.00 116 116 0 0 0 0 0 0 0
.................................................................................................................TGATTATACCGAACACTCGTGCC.............................................................. 23 3 1 116.00 116 116 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACCCTCGTGC............................................................... 22 1 1 116.00 116 109 7 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTCT............................................................... 22 2 1 115.00 115 115 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGGGC............................................................... 22 1 1 114.00 114 105 9 0 0 0 0 0 0
.................................................................................................................TTATTAGCCCGAACACTCGTGCT.............................................................. 23 3 1 113.00 113 113 0 0 0 0 0 0 0
.................................................................................................................TGACTGGACCGAACACTCGTGC............................................................... 22 1 1 112.00 112 110 2 0 0 0 0 0 0
.............................................................................................................GATCTGACTAGACCGAACACTCGTGCT.............................................................. 27 2 1 110.00 110 110 0 0 0 0 0 0 0
.................................................................................................................TGATTAGACTGAACACTCGTGCT.............................................................. 23 2 1 110.00 110 110 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGCACACTCGTGCC.............................................................. 23 2 1 109.00 109 105 4 0 0 0 0 0 0
.................................................................................................................TTACAAGACCGAACACTCGTGCT.............................................................. 23 2 1 107.00 107 106 1 0 0 0 0 0 0
.................................................................................................................TTACTAGCCCGAACACTCGTGC............................................................... 22 2 1 106.00 106 106 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGACCACTCGTGAC.............................................................. 23 3 1 106.00 106 106 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACGCGTGCC.............................................................. 23 2 1 104.00 104 103 1 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGCGCC.............................................................. 23 3 1 102.00 102 102 0 0 0 0 0 0 0
.................................................................................................................TTATTAGACCGAACACTCGTGCTT............................................................. 24 3 1 101.00 101 101 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGACCACTCGTGC............................................................... 22 2 1 100.00 100 100 0 0 0 0 0 0 0
...............................................................................................................TCTGACTAGACCGAACACTCGTGCT.............................................................. 25 2 1 100.00 100 100 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTTCC.............................................................. 23 3 1 99.00 99 99 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGGACACTCGTGCC.............................................................. 23 2 1 99.00 99 93 4 2 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCTTGC............................................................... 22 1 1 98.00 98 98 0 0 0 0 0 0 0
.................................................................................................................TTACTACACCGAACACTCGTGCT.............................................................. 23 2 1 98.00 98 98 0 0 0 0 0 0 0
.................................................................................................................TGACTAGAGCGAACACTCGTGCT.............................................................. 23 1 1 98.00 98 78 18 0 2 0 0 0 0
.................................................................................................................TGACTAGCCCGAACACGCGTGAT.............................................................. 23 3 1 96.00 96 96 0 0 0 0 0 0 0
.................................................................................................................CGACTAGACCGAACACTCGTGC............................................................... 22 1 1 95.00 95 89 6 0 0 0 0 0 0
..................................................................................................................GACTAGACCGAACACTCGTGCC.............................................................. 22 1 1 95.00 95 95 0 0 0 0 0 0 0
.................................................................................................................TGACTAGATCGAACACTCGTGCC.............................................................. 23 2 1 94.00 94 93 1 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACGCTCGTGCT.............................................................. 23 2 1 93.00 93 93 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTAC............................................................... 22 2 1 92.00 92 92 0 0 0 0 0 0 0
.................................................................................................................TTACTTGACCGAACACTCGTGCT.............................................................. 23 2 1 92.00 92 92 0 0 0 0 0 0 0
.................................................................................................................TGACTATCCCGACCACTCGTGCT.............................................................. 23 3 1 91.00 91 91 0 0 0 0 0 0 0
.................................................................................................................TGATTAGACCGAACATTCGTGCT.............................................................. 23 2 1 90.00 90 90 0 0 0 0 0 0 0
.................................................................................................................TGACTAAACCGAACACTCGTGCC.............................................................. 23 2 1 90.00 90 90 0 0 0 0 0 0 0
.................................................................................................................GGACTAGACCGAACACTCGTGC............................................................... 22 1 1 90.00 90 87 3 0 0 0 0 0 0
..............................................................GGAGAATGTCGGTATGGTCTCT.................................................................................................................. 22 1 1 89.00 89 89 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACCCTCGGGCT.............................................................. 23 2 1 89.00 89 88 1 0 0 0 0 0 0
.................................................................................................................TGAATAGACCGAACACTCGTGCT.............................................................. 23 1 1 88.00 88 28 60 0 0 0 0 0 0
.................................................................................................................TTACTAAACCGAACACTCGTGCT.............................................................. 23 2 1 87.00 87 87 0 0 0 0 0 0 0
.................................................................................................................TTATTATACCGAACACTCGTGCT.............................................................. 23 3 1 86.00 86 86 0 0 0 0 0 0 0
.................................................................................................................TGACTACACCGAACACTCGTGCC.............................................................. 23 2 1 85.00 85 85 0 0 0 0 0 0 0
.................................................................................................................TGATTAGACCAAACACTCGTGCT.............................................................. 23 2 1 85.00 85 85 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGCGC............................................................... 22 1 1 83.00 83 63 20 0 0 0 0 0 0
.................................................................................................................TGACTAGCCCGAACACTCGTGAC.............................................................. 23 3 1 83.00 83 83 0 0 0 0 0 0 0
.................................................................................................................TGACTAGCACGAACACTCGTGCT.............................................................. 23 2 1 83.00 83 81 2 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACCCTCGGGCT.............................................................. 23 3 1 82.00 82 82 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGCTTT............................................................ 25 1 1 82.00 82 75 6 1 0 0 0 0 0
.................................................................................................................TGCTTAGACCGAACACTCGTGCC.............................................................. 23 3 1 80.00 80 80 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAAGACTCGTGCT.............................................................. 23 1 1 80.00 80 71 9 0 0 0 0 0 0
.................................................................................................................TGACTAGTCCGAACACTCGTGCT.............................................................. 23 1 1 80.00 80 62 18 0 0 0 0 0 0
.................................................................................................................TTACTAGCCCGAACACTCGTGAT.............................................................. 23 3 1 79.00 79 79 0 0 0 0 0 0 0
.................................................................................................................TGAGTAGACCGAACACTCGTGCT.............................................................. 23 1 1 79.00 79 61 18 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACGCGTGAC.............................................................. 23 3 1 78.00 78 78 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGCCT............................................................. 24 2 1 77.00 77 71 6 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGACCACTCGTTAT.............................................................. 23 3 1 77.00 77 77 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCCAACACTCGTGCT.............................................................. 23 2 1 76.00 76 75 1 0 0 0 0 0 0
.................................................................................................................TGTCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 76.00 76 65 11 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTTGTGC............................................................... 22 1 1 75.00 75 72 3 0 0 0 0 0 0
.................................................................................................................TGACTAGAACGAACACTCGTGC............................................................... 22 1 1 75.00 75 68 7 0 0 0 0 0 0
.................................................................................................................TTACTAGCCCGAACACGCGTGCT.............................................................. 23 3 1 75.00 75 75 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCCAACACTCGTGCC.............................................................. 23 2 1 75.00 75 74 1 0 0 0 0 0 0
.....................................................................................................................TAGACCGAACACTCGTGCT.............................................................. 19 0 1 75.00 75 59 15 0 0 1 0 0 0
.................................................................................................................TGACTAGCCCGAACCCTCGTGCT.............................................................. 23 2 1 75.00 75 70 5 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACTCTCGTGCT.............................................................. 23 1 1 74.00 74 47 27 0 0 0 0 0 0
.................................................................................................................TGACTAGCCCGAACACGCGTGCC.............................................................. 23 3 1 74.00 74 74 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGACCCCTCGTGCT.............................................................. 23 3 1 74.00 74 74 0 0 0 0 0 0 0
.................................................................................................................TGACTAGCCCGACCACTCGTGCT.............................................................. 23 2 1 73.00 73 69 4 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGACCACTCGTTCT.............................................................. 23 3 1 72.00 72 72 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGCACCCTCGTGCT.............................................................. 23 2 1 72.00 72 16 56 0 0 0 0 0 0
.................................................................................................................TTACTAGATCGAACACTCGTGCT.............................................................. 23 2 1 72.00 72 72 0 0 0 0 0 0 0
.................................................................................................................TGACAAGACCGAACACTCGTGCC.............................................................. 23 2 1 71.00 71 71 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGGACACTCGTGCT.............................................................. 23 2 1 70.00 70 70 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGA............................................................... 22 2 1 70.00 70 70 0 0 0 0 0 0 0
.................................................................................................................TGATTAGACCGAACACTCGTGCTC............................................................. 24 2 1 70.00 70 70 0 0 0 0 0 0 0
.................................................................................................................TTACTAGAACGAACACTCGTGCC.............................................................. 23 3 1 69.00 69 69 0 0 0 0 0 0 0
.................................................................................................................TTACTGGACCGAACACTCGTGCC.............................................................. 23 3 1 69.00 69 69 0 0 0 0 0 0 0
...................................................................................................................ACTAGACCGAACACTCGTGCT.............................................................. 21 0 1 68.00 68 47 20 0 0 0 1 0 0
.................................................................................................................TGACTAGACTGAACACTCGTGC............................................................... 22 1 1 67.00 67 62 5 0 0 0 0 0 0
.................................................................................................................TTACTAGACAGAACACTCGTGCT.............................................................. 23 2 1 67.00 67 66 1 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGCACACTCGTGC............................................................... 22 1 1 66.00 66 24 42 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACCCTCGCGCT.............................................................. 23 2 1 65.00 65 52 12 0 0 1 0 0 0
.................................................................................................................TGCCTAGACCGCACACTCGTGCT.............................................................. 23 2 1 64.00 64 58 6 0 0 0 0 0 0
.................................................................................................................TGATTAGCCCGAACACTCGTGCC.............................................................. 23 3 1 63.00 63 63 0 0 0 0 0 0 0
.................................................................................................................TGACTCGACCGAACACTCGTGCT.............................................................. 23 1 1 63.00 63 24 38 0 0 0 1 0 0
.................................................................................................................TTACTAGACCGAACACTCGTGTC.............................................................. 23 3 1 63.00 63 63 0 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACTGGTGCT.............................................................. 23 2 1 62.00 62 62 0 0 0 0 0 0 0
................................................................................................................CTGACTAGACCGAACACTCGTGC............................................................... 23 1 1 62.00 62 60 2 0 0 0 0 0 0
.................................................................................................................TTACGAGACCGAACACTCGTGCT.............................................................. 23 2 1 60.00 60 60 0 0 0 0 0 0 0
.................................................................................................................TCACTAGACCGAACACTCGTGCTT............................................................. 24 2 1 60.00 60 60 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTTC............................................................... 22 1 1 58.00 58 57 1 0 0 0 0 0 0
.................................................................................................................TAACTAGACCGAACACTCGTGCTT............................................................. 24 2 1 58.00 58 58 0 0 0 0 0 0 0
.................................................................................................................TGCCTAGACCGAACACTCGTGCTT............................................................. 24 2 1 57.00 57 56 1 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGCTAT............................................................ 25 0 1 57.00 57 28 27 0 1 1 0 0 0
.................................................................................................................TGACTAGACCGAACACTCCTGCC.............................................................. 23 2 1 57.00 57 55 2 0 0 0 0 0 0
.................................................................................................................TGATTAGACCGAACACTCTTGCC.............................................................. 23 3 1 56.00 56 56 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTCGTGGC.............................................................. 23 2 1 55.00 55 55 0 0 0 0 0 0 0
................................................................................................................CTCACTAGACCGAACACTCGTGCT.............................................................. 24 2 1 55.00 55 55 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACACTTGCT................................................................ 21 3 1 55.00 55 55 0 0 0 0 0 0 0
.................................................................................................................TTACTAGCACGAACACTCGTGCT.............................................................. 23 3 1 54.00 54 54 0 0 0 0 0 0 0
....................................................................................................................CTAGACCGAACACTCGTGCT.............................................................. 20 0 1 54.00 54 48 6 0 0 0 0 0 0
.................................................................................................................TTACTAGACCGAACACGCGTGCT.............................................................. 23 2 1 54.00 54 54 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACATTCTTGCT.............................................................. 23 2 1 53.00 53 53 0 0 0 0 0 0 0
.................................................................................................................CTACTAGACCGAACACTCGTGC............................................................... 22 2 1 52.00 52 52 0 0 0 0 0 0 0
.................................................................................................................TTACTATACCGAACACTCGTGC............................................................... 22 2 1 52.00 52 52 0 0 0 0 0 0 0
.................................................................................................................TGACTAGACCGAACATTCGTGAT.............................................................. 23 2 1 52.00 52 52 0 0 0 0 0 0 0
.................................................................................................................TGCCTAGACCGACCACTCGTGCT.............................................................. 23 2 1 52.00 52 51 1 0 0 0 0 0 0

Anti-sense strand reads

TTAGTTGTCATTACGTTTTCTCTTCTCATTCACAATATCCGTGAGGTCAAAATTTTAACTTACCGCTTACAGCCATACCAGAGAAAAAGTTTTCTCCAAAGCTAGTTCGCTTCACTGATCTGGCTTGTGAGCACGATATTAAAATTTTATAAGTTGTACGAGTCACTTCAACGTTCACTTTAATTAGTCTATGACCCC

***********************************************((((((((((((....((((.(((((((.(((((.((((.......((....))........)))).))))).)))).))).))))....))))))))))))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M043

female body
......................ATCTCATACACAGTATCCGT............................................................................................................................................................ 20 3 5 0.20 1 1
..............................................................................................................TTCATTGAACTGGCTCGTG..................................................................... 19 3 13 0.08 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droYak3 2R:13623713-13623910 + dya-mir-286 Known_mirbase AATCAAC--A----G----T-AATG-----------------------------------------------------------CAAAAGAGAAGAGTAAGTGTTA-------------------------------------------T-AGGCACTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAAA-G-A-------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA---------------------------GTGAAGTT-GCAAGTGAAATT-AA--TCAG-----------------------------------------------ATAC---T--GGGG
droEre2 scaffold_4845:9749129-9749320 - der-mir-286 Known_mirbase AATCAAC--A----A----CAAATG-------------------------------------------------------------------CAGAGTAAGTGTTA-------------------------------------------T-AGGCACTGCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAAG-A-A-------GGTT----TCGATCGA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCACA----------CT---------------GTGAAGTT-GCGAGTGAAAAC--------------------------AAA-----------------------A--GATAC---T--GTAG
droSec2 scaffold_1:13063607-13063803 - dse-mir-286 Known_mirbase AATCAAC--A----A--T------C-----------------------------------------------------------AAAAAATCAAGAGTAAGTTATA--T----------------------------------------T-GGGCACTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAT-AAA-------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA---------------------------GTGAAGTT-GCAAGTGAAACT-----TCAA-------------------------------------------A--TATTC---T--GTGG
droSim2 2r:16196149-16196346 - dsi-mir-286 Known_mirbase AATCAAC--A----A--T------C-----------------------------------------------------------CAAAAAGCAAGAGTAAGTGATA--T----------------------------------------T-GGGCACTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAAGAAA-------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA---------------------------GTGAAGTT-GCAAGTGAAACT-----TCAA-------------------------------------------A--TATTC---T--GTGG
dm3 chr2R:15548878-15549076 - dme-mir-286 Known_mirbase AATCAAT--T--AAA--T------C-----------------------------------------------------------AAAAAATCAAGAGTAAGTGATA--T----------------------------------------T-GGGCACTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAAG-AAA-------GGTT----TCGATTAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA---------------------------GTAAAGTT-GCGAGTGAAAAT-----TAAA-------------------------------------------A--TATTA---T--GGAG
droEug1 scf7180000409474:2396808-2396991 + AATCATC--A----A----GA-CTT-----------------------------------------------------------T-AAACTGAAAAGTAAGTGATA--A----------------------------------------T-TGGCAATCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTCAAAC-----------G------------------------ACTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATAATCAACAAGCTAA---------------------------GTGAA-------AGTTAAAAA-----GCAA-AAA-------------TAA-----------------------A--GA-TC---T--AAAA
droBia1 scf7180000302143:3059780-3059966 - ACTGAAA--A----A----TACGTG------------------------------------------------------------------CCAAAGTAAGTGAGA--A-------------------------------------------GGGCCTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAA----C-------GGTG----ACGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATACTCAACAAGCGAA---------------------------GTGAAGTT-AAAGGTGCAAGT------GGG-------------------------------------------C--CA-TC---A--AACT
droTak1 scf7180000415384:84006-84190 + GAAATA----------------ATC------------------------------------------------------------------TCAAAGTAAGTGATA--C----------------------------------------C-AGGCTCTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAA----C-------GATT----ACCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTTA---------------------------GTGAAGTT-A-AAGTTAAAGTTAA--TGTG-----------------------------------------------AATG---T--AGGC
droEle1 scf7180000491201:2013963-2014141 - ATACAAA-------G--C-C-AATA------------------------------------------------------------------CAAAAGTAAGTGATA--A----------------------------------------T-CGGTGCTCCA--GTTTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTAAAA----T-------GGTT----TCGACCAA---------GCGTAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCCAA---------------------------GTGATGTTTTTTAGTGAAA--------------------------------------------------------------------GAGG
droRho1 scf7180000780066:73613-73803 + ACCATAT--A---AA--TAC-AATA------------------------------------------------------------------CAAAAGTAAGTGATA--A----------------------------------------T-TGGCACTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTAATA----C-------GGTT----CCGACCAA---------GCTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAGTTTTCAACTTGCCTA---------------------------GTGAAATT-ATTAGTGAAAAG------AAG-------------------------------------------A--CA-TC---C--AAGA
droFic1 scf7180000454039:848011-848184 - AACAAAC--C----A--A-T-AATC-----------------------------------------------------------C----------AACAAGTGAAC--T----------------------------------------TAAGGCTCATCA--G-TTTTAAAATTAAATGGCGATTGTCGGTATAGTCGCTTTTACAAA----C-------ATTT----CCTTTCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACAGACAAG---------------------------GTGAAGTT-ACCAGTGAAAA----------------------------------------------------------------------A
droKik1 scf7180000302679:89323-89527 - CCAAGAA--AGTAAAGTT------C-----------------------------------------------------------CAAAAGTGAAAAGAAACAGCTA--A----------------------------------------T------TACCA--G-TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTGAAAC-C-A-------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGTTAGGGGATAAA-------------------GTGCAGTT-GTAA-----------------------------------------------------CAAGTTAATATATCCAAAC--AAGG
droAna3 scaffold_13266:9731322-9731511 + dan-mir-286 Known_mirbase ATTCATC--A----------------------------------------------------------------------------------AATTGTAAGTGATT--T----------------------------------------T-TAGCATCAGA--A-TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCACAA-AAAAATT---GGTT----ACCAACAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTAA--------------------A------GTG-ACTT-GGAAATGTAAAG-TT--TCAA-----------------------------------------------ATAA---T--ATAC
droBip1 scf7180000396427:874304-874479 + AGTCATC-------------------------------------------------------------------------------------AAATGTAAGTGGTT--A----------------------------------------T-TAGCATCAGA--A-TTTTAGAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTTCACAAAAG-------GGTT----TCCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCTAA--------------------A------GTG---TT------------------TCAA--A--------------TA-----GT--------------------GTTTC---T--TAAA
dp5 3:12677502-12677730 - dps-mir-286 Known_mirbase AGAATG--GC------------------------GATAAAG-----------------------------TGTGTGTGTCGCAG---------------------------------A---------------------------AAAA----GAAGACAA--A-TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACCA----G-------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA--------ACCAGTGACGA-----------AAG--------TGA-------CA----AAAGTGAAAAAAGTGACAAAGTTTGTGTACACTCCACGAGTTGA--TACCT---T--ATTG
droPer2 scaffold_2:8905936-8906164 + dpe-mir-286 Known_mirbase AGAATG--GC------------------------GATAAAG-----------------------------TGTGTGTGTCGCAG---------------------------------A---------------------------AAAA----GAAGACAA--A-TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACCA----G-------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA--------ACCAGTGACGG-----------AAG--------TGA-------CA----AAAGTGAAAAAAGTGACAAAGTGTGTGTACACTCCACGAGTTGA--TACCT---T--ATTG
droWil2 scf2_1100000004514:1651691-1651912 - dwi-mir-286 Known_mirbase AAAAGTTAGC--C-A--A------C-----------------------------------------------------------CAAAC----TTAGTGAGTGACT--ATG------C---------------------------AA--T-TGAA--ATTA--C-TTTTAAAATTGAATGGCGATTGTCGGTATAGTCTCTTTTTCCAAA-A-ATCTTGTTTGTTTTTGCCAATCTA------ATAAGAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCAAC--------------------A------ACCAACAA-GCTAGTGAGAA-----------GAATTA-----------------------------------ACTTTAACCAAATGGCGGG
droVir3 scaffold_12875:4112060-4112309 + dvi-mir-286 Known_mirbase ATATTCC--A--------------------------------------------GTGTTT--CAG-----TG-------------------------------TGACAGTGTTCCAGTATTCCAGTGTTTCAATTCC---------------AATATTCCAGTA-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTTCAAAC-A-A-------TATA----CCATT-AT-----CTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACGTATATA--------A---AAAGCACAA-----------G--------TTC-------TC----GATTTGATAACCGTCGCAATATATATATATA---TATATATCTA--TATCA---T--ATAG
droMoj3 scaffold_6496:20936711-20936980 - dmo-mir-286 Known_mirbase AGCACA--AA------------------------GGAGGAGTGTTTCAGTTCCAGTGTTT--CAC-----TA-------------------------------T--CAGTGTTTCACT--TTCAGTGTTTCATTTCCAGTGTTCGAAAA----TTA-TAAA--A-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCTCTTTTTCAACA-T-A-------T--------ACACCAAACATTCTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAATTTCAATT------------------------ATAAAATT-TCTAGTGCATGG--T--TC--AAACTTAAAAAGAAAACAAAA-------------------TCTA--TATCG---T--ATAG
droGri2 scaffold_5621:2742-2979 + dgr-mir-286-2 Known_mirbase AAGAAAA--T--A---------ATATAAAATGGCAATT-----T-----TTGCAGTGTTTTGCAGTGTTTTGTGTGTGTTGCAG---------------------------------T---------------------------CAAA----CCCAGCCAGTA-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTGAACCT-AAACTCT---ATAT----ACAATA--------TATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACATAGGCA--------AC----------AGTTTTGGTTAAA--------TAA--T-------AAA------------------------------------TCGATCTA--TGTTT---T--ATAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
AATCAAC--A----G----T-AATG-----------------------------------------------------------CAAAAGAGAAGAGTAAGTGTTA-------------------------------------------T-AGGCACTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAAA-G-A-------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA---------------------------GTGAAGTT-GCAAGTGAAATT-AA--TCAG-----------------------------------------------ATAC---T--GGGGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................2311113308.00111330841019110027701097537210740010
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................231264917.002649177702646062340000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................22156464.005646457125223441544300000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................24112894.001289441122915941300000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.................................................................................................................................................2314780.00478010477630000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCT...........................................................................................................................................................................................................................2212118.002118212088270000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................2311773.0017731501702541100000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................2411451.001451001425250100000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................2211083.001083107882940000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................211892.00892336732111100000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCC...........................................................................................................................................................................................................................221709.007090070900000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................241530.0053010464650000000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................221468.0046809416420100000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.................................................................................................................................................231213.002130021210000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................221203.002030019580000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................191195.001954018920000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTC............................................................................................................................................................................................................................211169.001690016540000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................231168.0016802146191000000
...........................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT.................................................................................................................................................241136.001360013420000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................201118.001181087300000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..................................................................................................................................................221115.001150011500000000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC.................................................................................................................................................22195.0095009500000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT................................................................................................................................................24177.0077007160000000
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.................................................................................................................................................19175.00750059150100000
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................21168.00680047201000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT...............................................................................................................................................25157.00570128270100000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGC.................................................................................................................................................23155.0055005500000000
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.................................................................................................................................................20154.0054004860000000
droEre2
AATCAAC--A----A----CAAATG-------------------------------------------------------------------CAGAGTAAGTGTTA-------------------------------------------T-AGGCACTGCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAAG-A-A-------GGTT----TCGATCGA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCACA----------CT---------------GTGAAGTT-GCGAGTGAAAAC--------------------------AAA-----------------------A--GATAC---T--GTAGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................231107629.001076293537544691495304817
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................23110737.001073719105590158010
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................2219280.0092801836142029420130
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................2411090.001090457390302130
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................211930.00930534500427000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................221335.0033528225028000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................221287.002872750210000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.................................................................................................................................................231157.00157015700000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................231150.00150067083000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................201142.001421230116020
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCT...........................................................................................................................................................................................................................22193.0093206409000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................24185.00851351021000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................24183.0083161021000
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................21154.0054926019000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................22137.0037126010000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................23131.0031216011020
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCC...........................................................................................................................................................................................................................22125.002502500000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................19124.002401806000
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.................................................................................................................................................20120.00207508000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.................................................................................................................................................23117.001701403000
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.................................................................................................................................................19116.001621013000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..................................................................................................................................................21114.00149401000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT...............................................................................................................................................25112.00121209000
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC..................................................................................................................................................20111.00113305000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..................................................................................................................................................2219.0093600000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG................................................................................................................................................2419.0095202000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT................................................................................................................................................2417.0070304000
droSec2
AATCAAC--A----A--T------C-----------------------------------------------------------AAAAAATCAAGAGTAAGTTATA--T----------------------------------------T-GGGCACTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAT-AAA-------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA---------------------------GTGAAGTT-GCAAGTGAAACT-----TCAA-------------------------------------------A--TATTC---T--GTGGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................231271567.002715671362212640486136
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................22110716.001071666310498149
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................2412288.00228873225523
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................2111158.001158102112818
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................231482.004824046612
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................221440.00440114326
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................241333.00333603189
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................221204.002041030992
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT...............................................................................................................................................251192.00192201873
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................201140.00140221333
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................23188.008841785
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................21173.007340681
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................23152.005210510
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................24148.004800471
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..................................................................................................................................................22145.004540392
.........................................................................................................................................................................................................TTTTCCAAT-AAA-------GGTT----TCGATCAA---------GCG...........................................................................................................................................................................27134.003420311
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCT...........................................................................................................................................................................................................................22132.003250270
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................22122.002202182
.................................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT.................................................................................................................................................18121.002100210
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.................................................................................................................................................20121.002110200
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.................................................................................................................................................19120.002010190
.........................................................................................................................................................................................................TTTTCCAAT-AAA-------GGTT----TCGATCAA---------GC............................................................................................................................................................................26118.001800180
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTC......................................................................................................................................................18116.001630130
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................19116.001610150
.........................................................................................................................................................................................................TTTTCCAAT-AAA-------GGTT----TCGATCAA---------G.............................................................................................................................................................................25112.001200120
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT....................................................................................................................................................2219.0090090
.................................................................................................................................................................................ATGGCGAATGTCGGTATGGTC..............................................................................................................................................................................................................................2119.0090081
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG................................................................................................................................................2419.0091080
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..................................................................................................................................................2117.0072050
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA.................................................................................................................................................2316.0060060
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCTCT...................................................................................................................................................2116.0061041
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.................................................................................................................................................2315.0050050
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGGCT..................................................................................................................................................2214.0040040
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT...................................................................................................................................................2113.0030030
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGCCT..................................................................................................................................................2213.0030030
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT................................................................................................................................................2413.0030030
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCAT................................................................................................................................................2413.0030021
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCT.............................................................................................................................................................................................................................2013.0030030
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAA...............................................................................................................................................2513.0030030
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG...................................................................................................................................................2313.0030030
.........................................................................................................................................................................................................TTTTCCAAT-AAA-------GGTT----TCGATCAA---------GCGA..........................................................................................................................................................................2812.0020020
.........................................................................................................................................................................................................TTTTCCAAT-AAA-------GGTT----TCGATCA........................................................................................................................................................................................2312.0020020
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCTT................................................................................................................................................2212.0020020
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTT................................................................................................................................................2312.0020020
droSim2
AATCAAC--A----A--T------C-----------------------------------------------------------CAAAAAGCAAGAGTAAGTGATA--T----------------------------------------T-GGGCACTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAAGAAA-------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA---------------------------GTGAAGTT-GCAAGTGAAACT-----TCAA-------------------------------------------A--TATTC---T--GTGGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................2311382795.001382795251910879609732122304085121213235111035311169942314100
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................231113758.001137583351081128210003113785026800000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................22169704.00697042838646695171922272860658882781634000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................23154047.00540478652537391002160016000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................1914915.0049151994845135008191500000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................2414724.0047241210225250015101138742053901000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................2114456.004456281325101132410844582143900000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG..................................................................................................................................................2213354.00335495333800000000200000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................2412731.00273141978000211386276119000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.................................................................................................................................................2311653.00165341164700000000100000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT...............................................................................................................................................2511566.00156611701006065875207700000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................2211150.0011508278700000119033102000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCT...........................................................................................................................................................................................................................221976.009761147610014324822201000000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................221722.0072211557150010343407900000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................201603.00603813100315511057817501000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................231478.004781132200063635902300000
.........................................................................................................................................................................................................TTTTCCAAAGAAA-------GGTT----TCGATCA........................................................................................................................................................................................241299.002990029010000340100000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTC......................................................................................................................................................181266.00266002070325008230000000
.........................................................................................................................................................................................................TTTTCCAAAGAAA-------GGTT----TCGATCAA---------G.............................................................................................................................................................................261171.001710016000000370100000
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................211170.001700010100000251403000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................241137.00137017700010191502400000
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.................................................................................................................................................201124.00124007300000201201900000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................221121.001218285000116501300000
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.................................................................................................................................................19196.0096002500010191603500000
.................................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT.................................................................................................................................................18181.008110370000019143700000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG................................................................................................................................................24174.0074006400000350200000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC.................................................................................................................................................22167.0067006700000000000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTC............................................................................................................................................................................................................................21159.00590029001201590300000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCC...........................................................................................................................................................................................................................22158.0058005800000000000000
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG...................................................................................................................................................23149.004900130000021150000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..................................................................................................................................................22145.00451060000024140000000
...........................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT.................................................................................................................................................24145.0045004100000200200000
.........................................................................................................................................................................................................TTTTCCAAAGAAA-------GGTT----TCGATCAA---------GCG...........................................................................................................................................................................28137.0037003000010510000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG.................................................................................................................................................23136.00360020000000001600000
.........................................................................................................................................................................................................TTTTCCAAAGAAA-------GGTT----TCGAT..........................................................................................................................................................................................22136.0036003300000110100000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGG....................................................................................................................................................20136.0036003600000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT................................................................................................................................................24135.0035003000000110300000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACT.......................................................................................................................................................17134.0034000000108250000000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..................................................................................................................................................21133.0033002400000410400000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCG.................................................................................................................................................22132.0032003200000000000000
.................................................................................................................................................................................ATGGCGAATGTCGGTATGGTC..............................................................................................................................................................................................................................21129.00290015000000101300000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.................................................................................................................................................23127.0027002400000000300000
...................................................................................................................................................................................................................................................................ACCGAACACTCGTGCT.................................................................................................................................................16127.0027000000001980000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACAC........................................................................................................................................................16125.00250000000010150000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCT.............................................................................................................................................................................................................................20115.001500900010220100000
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT....................................................................................................................................................22115.0015001000000000500000
dm3
AATCAAT--T--AAA--T------C-----------------------------------------------------------AAAAAATCAAGAGTAAGTGATA--T----------------------------------------T-GGGCACTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAAG-AAA-------GGTT----TCGATTAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA---------------------------GTAAAGTT-GCGAGTGAAAAT-----TAAA-------------------------------------------A--TATTA---T--GGAGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................231525385.0052538500001844492491179644580310000000150094021181100107123122121319641123116271130002830000000000000000005431528573130591871321553705829104251310212210513823417245933700554163110617284194130431747304473416410201311974721110000025110098522175144797567043979747361422316330970102650415035101026004113118241811147801225711590005072102102163170000003013724244844828281448487482623146306000009401128001087726728710417412145254925398772141225101851011117538195281574923038250128161353514111720659313929815573919202151438155920102739133268554211331714564181459243861062591524831801441731980
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCT...........................................................................................................................................................................................................................22145803.00458030000402895253516000000000000000000000000300000000000000000100000000000000000000000101001034815757615729812144401600421422010331029142114211860260073055191024000000000000100000000000821058116736470100010000000000000100020200000100000000000000000000000805000200000000000010011170110010000073640000000000000000010001000000210000000402000000110132524201400000000000120011000100000001120200000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................22124186.00241860000011391136811100000000001001000000005101021032032000072100080000000000000000000000004322323887804500116400111249610618631623104540229093013000212000000000000100167215993818229020524100041644630005000901600003202001200051012120300010000801113000000100651166972611652730641412190000101512350132129120205601381851042161310029210313420221015011525132512316541150020200006031210912053023942225444886747254531310
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................2118414.0084140000001314120000000000000000000000003493000000010111000110000010000000000000000000000003935381311100001202100311820001040006751016001000000010000000000000270331549243927000140000000000000101000001001000100001021000000000000000500000000000101116100421220002000024833800100001002000031601000110200130202701211028010413111162952010300113202001110100702014013112911102143130
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................2415866.0058660000003201770000000000000000000000000000000000400100000000000000000000000000000000034318415528240000210001013302600301411000149342340100001010001000000000001263267255063040001000000000000000000010010010100000010120010000000000000100000000000011112056020300200001052070010001010400000110000000101021021221116132100030102035247004000010010031004042112300001259150112270
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCT.............................................................................................................................................................................................................................2015774.0057740000000410000000000000000000000000540200000000000000000000000000000000000000000000006012270000000010000000000001000400000000000000000000000000017191464000000040000000000000000000000000000000000000000000000000000000000000000000000000000000003400000000000000000000000000000000000000000000000002303200000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................2014804.004804000000000000000000000000000000000025930000001003000000000000000000000000000000000000517200000100000010000000000000120000000000000000000000000010157119889250000000000000040610000000000000000000020100000000000000002100200000000030500070300000000809200100100000001021000000000000600026010103010010021937465501011000010000018219130124034160721141421150
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................2313154.00315400000015513810000000000000000000000000000000000000000000000000000000000000000000000002491499814136003002000001001700009170008112043000000001000000000000000961593422562200000000000000000000000000000000000000000200000000000000000000000000000000001036110000000003568000000000020000250000000000000000201150300000000110517700000000000101000100000010000001040001020
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTC............................................................................................................................................................................................................................2112028.00202800000069220000000000000000000000001000000010000000000000000000000000000000000000016027216720200000200000000000200273300028103000000000100000000000000013789732410000000000000000000000000000000000000000000000000000020000000000000010000000010200000000138000000000000000000000010000000000000100000000000111192400600001000000000000000000010000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................2411874.0018740000006192100000000000000010000000000200000000000000000004000000000000000000000000152111487625000002002000000000008700059502700000000000000000000000057151359108181000020030000000000000000000000000000000000000000000000000000000000000000131317321620001100305200000000000000021000000000000101110415040000000103812000000000000000000010000010000000150001000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT...............................................................................................................................................2511018.0010180000002102000000000000000000000000000000000000000000000000000000000000000000000000926825491600000000100000000000010003100400000000000000000000000014356519200000100000000000000000000000000000000000200000000000000002000000000000000403070023100010002419000000000000000000000000000000000000010000000000038433000020000000000000000000000000000120000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................231501.005010000101478517000000000000000000000000001000000000000000000000000000000000000000000003877108001000000000100100001400082032001000000000000000000000317423740000000000000010000000100000000000100000000000000000000000000000000000000000008011001000069000000000000000000000000000000002200001600000100073900000000000000000000000001000000000001000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................191419.0041900000000000000000000000000000000001650100000000000000000002000000000000000000000000500000000000010000100000020000410700000000000000000000000011715120300000000000000000000000000000000000000000000000000000000000000000030000001000300000000008220000000000000000100000000000000000020000000000000845410000000000000000100000000000100100000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................231390.00390000010299100000000000000000000000000000000000000000000000000000000000000000000000101212170000000000000000000054000261031000000000000000000000000926397840000000000000000000000000000000000100000020000000000000000000000000000000000000010000000036000000000010000010001000000000000000000000000000065200000000000000000000000000000000010000100
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................221359.003590000001420000000000000000000000000000000000000000000000000000000000000000000000003125162010000000000000000000000000170090010000000000000000000003818160000000000000000000000230000000100000000006000000000000000000000000000000000000210800000000470000000000000000200000000000000000000300000000000121900000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................221268.0026800000002340000000000000000000000000000000000000000000000000000000000000000000000074131300000010000011000000000000720000000000000000000000000011317304100000000000000000000010000000000010000000000000000000000000000000000000000000303000100001390000000000100001700001000000000000010000000000000741400000000000000000000000020000100800011100
.........................................................................................................................................................................................................TTTTCAAAG-AAA-------GGTT----TCGATTAA---------GCG...........................................................................................................................................................................271195.0019500000000000000000000000000000000000000000000000000000000000000000000000000000000080500000000000000000000000000000000000000000000000000000000436010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000110000000000000000000000000000000000000000000000000163200000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................241188.00188000000020000000000000000000000000000000000000000000000000000000000000000000000000121183020000000000000000000001000100000000000000000000000000006824900000000000000000000000000000000000000000002000000000000000000000000000000010001010000000026000000000000000000000000000000000001000000010000043600000000000000000001000000000000000000000
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................211160.0016000000000100000000000000000000000000000000000000000000000000000000000000000000000090372000000000000200000000000021030000000000000000000000005491000000000000000000000000000000000000000000100000000000000000000000000000001000000300000000670000000000000000300000000000000002000000000000000701600000000000000000000000000000000020000000
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.................................................................................................................................................191141.00141000000000000000000000000000000000000000000000000000000000000000000000000000000000130161000000000010012010000000000400000000000000000000000000031620800000000000000000000000000000100000000000000000000000000100000000000000000000000000000000055000000000000000000000000000000000000000000000000033100000000000000000000000000000000000000000
.................................................................................................................................................................................ATGGCGAATGTCGGTATGGTC..............................................................................................................................................................................................................................211125.001250000000000000000000000000000000000000000000000000000000000000000000000000000000006032000000000000000000000000000000000000000000000000000000152840000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000080900000000000000000000000000000000020000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCC...........................................................................................................................................................................................................................221123.00123000000461100000000000000000000000000000000000000000000000000000000000000000000000309032000000100000000000000140000002000000000000000000000000014600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000029000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.................................................................................................................................................201121.001210000000110000000000000000000000000200000000000000000000000000000000000000000000001128410000000000000010000000000400300000000000000000000000011591170000000000000000000000000000000000000000000000000000000000000000000000000000001000000000036000000000000000000000000000000000000000000000000026400000000000000000000000000000000000000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTC..............................................................................................................................................................................................................................191113.001130000000000000000000000000000000000240000000000000000000000000000000000000000000000300020000000000000000000000000000000000000000000000000000040157000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000019200000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT.................................................................................................................................................18197.00970000000000000000000000000000000000000000000001000000000000000000000000000000000001034110000000000014110000000000010000000000000000000000000081025010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000000000000000000000000000000000200000000000000016200000000000000000000000000000000000000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGT...............................................................................................................................................................................................................................18193.009300000000000000000000000000000000000000000000000000000000000000000000000000000000050001000000000000000000000000010000000000000000000000000001752000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000059100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTATC..............................................................................................................................................26190.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................22180.0080000000111117000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000001000000000000000000000000000213500000000000000000000000000000000000000000000000000000000000000000000000000000001010000000053000000000000000000000000000000000000000000000000021200000000000000000000010000000000000000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCTT..........................................................................................................................................................................................................................23176.0076000000000000000000000000000000000000000000000000000000000000000000000000000000000118161160000000000000001000002000100100000000000000000000000005400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000
..................................................................................................................................................................................TGGCGAATGTCGGTATGGTCTCT...........................................................................................................................................................................................................................23165.006500000001000000000000000000000000000000000000000000000000000000000000000000000000016001600000000000000000000800000006000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000023100000000000000000000000000000000000000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCA...........................................................................................................................................................................................................................22157.005700000061011000000000000000000000000000000000000000000000000000000000000000000000001910020000000000000004000005000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCTA..........................................................................................................................................................................................................................23156.005600000001000000000000000000000000000000000000000000000000000000000000000000000000075001100000000000000000000400000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTTTCAAAG-AAA-------GGTT----TCGATTAA---------G.............................................................................................................................................................................25155.00550000000000000000000000000000000000100000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000223001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000035600000000000000000000000000000000000000000
....................................................................................................................................................................................GCGAATGTCGGTATGGTCTCT...........................................................................................................................................................................................................................21154.005400000002000000000000000000000000000000000000000000000000000000000000000000000000080101100000000000010000000040001006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTC......................................................................................................................................................18146.00460000000000000000000000000000000000000000000010000000000000000000000000000000000007010000000000000000000000000001004000000000000000020000000111001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000091300000000000000000000000000000000000000000
.....................................................................................................................................................................................CGAATGTCGGTATGGTCTCT...........................................................................................................................................................................................................................20141.0041000000100000000000000000000000000020000000000000000000000000000000000000000000000620170000000000000000000014000100300000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTTTCAAAG-AAA-------GGTT----TCGATTAA---------GCGA..........................................................................................................................................................................28135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000017000000000000000000000000000000000000000000
..................................................................................................................................................................................TGGCGAATGTCGGTATGGTCTC............................................................................................................................................................................................................................22135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000001081000000000000010000000000000004000000000000000000000000001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.................................................................................................................................................23134.00340000002000000000000000000000000000000000000000000000000000000000000000000000000002113000000100000000000000000000001000000000000000000000000102300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000014100000000000000000000000000000000100000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCG...........................................................................................................................................................................................................................22134.003400000003000000000000000000000000000000000000000000000000000000000000000000000000010011200000000000000010000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG................................................................................................................................................24134.0034000000010000000000000000000000000020000000000000000000000000000000000000000000000901000000000000000000000000000000000000000000000000000000002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005100000000000000000000000000000000000000000001000006200000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTTTCAAAG-AAA-------GGTT----TCGATTAA---------GC............................................................................................................................................................................26132.00320000000000000000000000000000000000000000000000000010000000000000000000000000000000051000000000000000000000000000000000000000000000000000000039000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAA...............................................................................................................................................25129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000203100000000000000000000002000100000000000000000000000000001200100000000000000000000000000000000000000000000000000000000000000000000000001000904000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................GAATGTCGGTATGGTCTCT...........................................................................................................................................................................................................................19127.00270000000000000000000000000000000000100000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000155000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG...................................................................................................................................................23127.0027000000030200000000000000000000000000000000000000000000000000000000000000000000000221700000000000000000000000000320000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
...................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCTC..........................................................................................................................................................................................................................23125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000005080000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droEug1
AATCATC--A----A----GA-CTT-----------------------------------------------------------T-AAACTGAAAAGTAAGTGATA--A----------------------------------------T-TGGCAATCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTCAAAC-----------G------------------------ACTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATAATCAACAAGCTAA---------------------------GTGAA-------AGTTAAAAA-----GCAA-AAA-------------TAA-----------------------A--GA-TC---T--AAAASizeHit CountTotal NormTotal
No Reads
droBia1
ACTGAAA--A----A----TACGTG------------------------------------------------------------------CCAAAGTAAGTGAGA--A-------------------------------------------GGGCCTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAA----C-------GGTG----ACGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATACTCAACAAGCGAA---------------------------GTGAAGTT-AAAGGTGCAAGT------GGG-------------------------------------------C--CA-TC---A--AACTSizeHit CountTotal NormTotal
No Reads
droTak1
GAAATA----------------ATC------------------------------------------------------------------TCAAAGTAAGTGATA--C----------------------------------------C-AGGCTCTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAAA----C-------GATT----ACCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTTA---------------------------GTGAAGTT-A-AAGTTAAAGTTAA--TGTG-----------------------------------------------AATG---T--AGGCSizeHit CountTotal NormTotal
No Reads
droEle1
ATACAAA-------G--C-C-AATA------------------------------------------------------------------CAAAAGTAAGTGATA--A----------------------------------------T-CGGTGCTCCA--GTTTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTAAAA----T-------GGTT----TCGACCAA---------GCGTAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCCAA---------------------------GTGATGTTTTTTAGTGAAA--------------------------------------------------------------------GAGGSizeHit CountTotal NormTotal
No Reads
droRho1
ACCATAT--A---AA--TAC-AATA------------------------------------------------------------------CAAAAGTAAGTGATA--A----------------------------------------T-TGGCACTCCA--G-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTAATA----C-------GGTT----CCGACCAA---------GCTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAGTTTTCAACTTGCCTA---------------------------GTGAAATT-ATTAGTGAAAAG------AAG-------------------------------------------A--CA-TC---C--AAGASizeHit CountTotal NormTotal
No Reads
droFic1
AACAAAC--C----A--A-T-AATC-----------------------------------------------------------C----------AACAAGTGAAC--T----------------------------------------TAAGGCTCATCA--G-TTTTAAAATTAAATGGCGATTGTCGGTATAGTCGCTTTTACAAA----C-------ATTT----CCTTTCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACAGACAAG---------------------------GTGAAGTT-ACCAGTGAAAA----------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droKik1
CCAAGAA--AGTAAAGTT------C-----------------------------------------------------------CAAAAGTGAAAAGAAACAGCTA--A----------------------------------------T------TACCA--G-TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTGAAAC-C-A-------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGTTAGGGGATAAA-------------------GTGCAGTT-GTAA-----------------------------------------------------CAAGTTAATATATCCAAAC--AAGGSizeHit CountTotal NormTotal
No Reads
droAna3
ATTCATC--A----------------------------------------------------------------------------------AATTGTAAGTGATT--T----------------------------------------T-TAGCATCAGA--A-TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCACAA-AAAAATT---GGTT----ACCAACAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTAA--------------------A------GTG-ACTT-GGAAATGTAAAG-TT--TCAA-----------------------------------------------ATAA---T--ATACSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................23141249.004124961228095121135643330
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................2317839.0078391780729002
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................2214133.0041336732298071326
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................241568.0056819431111214
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................211376.003762225189509
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.................................................................................................................................................231134.0013401340000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................22170.007003633001
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................20170.007012336055
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................22170.007049147000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................23167.006704621000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................24160.00601509000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................24145.00452358000
...................................................................................................................................................................................GGCGATTGTCGGTATGGTCGCT...........................................................................................................................................................................................................................22138.00381343000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................19133.00331311000
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................21132.00324197002
...................................................................................................................................................................................GGCGATTGTCGGTATGGTCGC............................................................................................................................................................................................................................21128.00281260001
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................22122.00220201001
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................23122.00220165100
...................................................................................................................................................................................GGCGATTGTCGGTATGGTCGCC...........................................................................................................................................................................................................................22117.00170170000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..................................................................................................................................................21115.00151131000
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.................................................................................................................................................20111.0011065000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.................................................................................................................................................2318.008062000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..................................................................................................................................................2217.007070000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTC......................................................................................................................................................1816.006051000
..................................................................................................................................................................................TGGCGATTGTCGGTATGGTCGC............................................................................................................................................................................................................................2215.005041000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT...............................................................................................................................................2515.005014000
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.................................................................................................................................................1915.005050000
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC..................................................................................................................................................1815.005041000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG...................................................................................................................................................2014.004310000
.........................................................................................................................................................................................................TTTTCACAA-AAAAATT---GGTT----ACCAAC.........................................................................................................................................................................................2614.004040000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC.................................................................................................................................................2214.004040000
.........................................................................................................................................................................................................TTTTCACAA-AAAAATT---GGTT----ACCA...........................................................................................................................................................................................2414.004040000
.........................................................................................................................................................................................................TTTTCACAA-AAAAATT---GGTT----ACC............................................................................................................................................................................................2314.004040000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGC.................................................................................................................................................2314.004040000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT...................................................................................................................................................2114.004002011
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCC.................................................................................................................................................2114.004040000
droBip1
AGTCATC-------------------------------------------------------------------------------------AAATGTAAGTGGTT--A----------------------------------------T-TAGCATCAGA--A-TTTTAGAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTTCACAAAAG-------GGTT----TCCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCTAA--------------------A------GTG---TT------------------TCAA--A--------------TA-----GT--------------------GTTTC---T--TAAASizeHit CountTotal NormTotal
No Reads
dp5
AGAATG--GC------------------------GATAAAG-----------------------------TGTGTGTGTCGCAG---------------------------------A---------------------------AAAA----GAAGACAA--A-TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACCA----G-------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA--------ACCAGTGACGA-----------AAG--------TGA-------CA----AAAGTGAAAAAAGTGACAAAGTTTGTGTACACTCCACGAGTTGA--TACCT---T--ATTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................231197384.00197384133833115522589773971221015
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................22199256.009925622251671405629785011218
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................23129723.00297230172935012922700000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................21113749.00137490106060060667701050
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................2214474.00447408615280285900001
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................2412419.0024190801631670100010
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................201946.00946028163075401000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.................................................................................................................................................231781.00781007801000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................221425.0042501032109400000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................221385.0038503113703700000
...................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGCT...........................................................................................................................................................................................................................221347.0034701626306800000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................231324.0032402122118100000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................231287.002870119868200000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................241287.002870325412801000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................241273.00273013152010800000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..................................................................................................................................................211239.0023902042001500000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................191206.002060615414500000
...................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGC............................................................................................................................................................................................................................211163.001637211902504060
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.................................................................................................................................................231124.001240110901400000
...................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGCC...........................................................................................................................................................................................................................221106.00106001050100000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG...................................................................................................................................................20193.009308820300000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG..................................................................................................................................................22145.004502803500000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC...................................................................................................................................................21142.004200360600000
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................21138.0038091701200000
.........................................................................................................................................................................................................TTTTACCA----G-------GGTT----CCGATCAA---------GCGAAG........................................................................................................................................................................27134.003400300400000
...................................................................................................................................................................................GGCGATTGTCGGTTTGGTCG.............................................................................................................................................................................................................................20131.003113901215000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGC....................................................................................................................................................20129.002900260300000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA...................................................................................................................................................21129.002900200900000
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC..................................................................................................................................................20121.002109201000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA.................................................................................................................................................23120.0020001001000000
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC..................................................................................................................................................18120.002002101700000
droPer2
AGAATG--GC------------------------GATAAAG-----------------------------TGTGTGTGTCGCAG---------------------------------A---------------------------AAAA----GAAGACAA--A-TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACCA----G-------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA--------ACCAGTGACGG-----------AAG--------TGA-------CA----AAAGTGAAAAAAGTGACAAAGTGTGTGTACACTCCACGAGTTGA--TACCT---T--ATTGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................231112653.0011265392737218192824220192
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................22137199.0037199307858362931316
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................2317731.0077317692038010
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................2116311.00631149963412270486
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................2313635.0036353609024020
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG..................................................................................................................................................2212076.002076206907000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................2211969.00196913842583000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................241665.006655104143080
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................191653.0065364417010
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................201533.005333821146031
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................221378.00378363213000
...................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGC............................................................................................................................................................................................................................211160.00160134040022
...................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGCT...........................................................................................................................................................................................................................221109.0010998011000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................22194.009461248010
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.................................................................................................................................................23187.00878601000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................24186.008669017000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................23182.008254025030
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTC......................................................................................................................................................18165.00656500000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT................................................................................................................................................24146.00464204000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGG....................................................................................................................................................20141.00414100000
...................................................................................................................................................................................GGCGATTGTCGGTTTGGTCG.............................................................................................................................................................................................................................20135.00353003002
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................21133.00332229000
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.................................................................................................................................................20124.00242301000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..................................................................................................................................................21123.00231364000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................24119.00191306000
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.................................................................................................................................................19113.0013508000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA.................................................................................................................................................23112.00121200000
...................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGCC...........................................................................................................................................................................................................................22110.00101000000
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC..................................................................................................................................................1819.009009000
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC..................................................................................................................................................2018.008602000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG...................................................................................................................................................2018.008431000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA...................................................................................................................................................2118.008602000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA.................................................................................................................................................2317.007403000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCG................................................................................................................................................2416.006600000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGC....................................................................................................................................................2016.006600000
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC.................................................................................................................................................2215.005500000
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGC..................................................................................................................................................1915.005302000
.................................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT.................................................................................................................................................1814.004301000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCT.....................................................................................................................................................1914.004400000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC...................................................................................................................................................2114.004103000
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG...................................................................................................................................................2313.003012000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGG.................................................................................................................................................2313.003300000
...................................................................................................................................................................................GGCGATTGTCGGTTTGGTC..............................................................................................................................................................................................................................1913.003200001
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCG.................................................................................................................................................2213.003300000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCC................................................................................................................................................2413.003300000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG................................................................................................................................................2413.003300000
droWil2
AAAAGTTAGC--C-A--A------C-----------------------------------------------------------CAAAC----TTAGTGAGTGACT--ATG------C---------------------------AA--T-TGAA--ATTA--C-TTTTAAAATTGAATGGCGATTGTCGGTATAGTCTCTTTTTCCAAA-A-ATCTTGTTTGTTTTTGCCAATCTA------ATAAGAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCAAC--------------------A------ACCAACAA-GCTAGTGAGAA-----------GAATTA-----------------------------------ACTTTAACCAAATGGCGGGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................231463839.00463839674107864596932388
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................22146657.0046657142175046072268
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................2215681.0056818100564617
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................2415244.0052444211520414
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................2115172.00517221320510118
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................2411257.001257016012392
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................231683.0068376106006
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................201590.005901015799
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................231568.005680705592
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................221367.0036719202731
...................................................................................................................................................................................GGCGATTGTCGGTATAGTCTCT...........................................................................................................................................................................................................................221292.002920002911
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA.................................................................................................................................................231143.001430001430
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................231114.001142200920
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................241100.00100110980
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................22196.0096110940
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..................................................................................................................................................22192.0092000920
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT....................................................................................................................................................22187.0087000870
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................21172.0072030690
...................................................................................................................................................................................GGCGATTGTCGGTATAGTCTC............................................................................................................................................................................................................................21172.0072000720
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG...................................................................................................................................................23153.0053010520
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT...............................................................................................................................................25152.0052000520
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..................................................................................................................................................21137.00370140230
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG................................................................................................................................................24137.0037010360
.................................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT.................................................................................................................................................18128.0028000271
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCAT................................................................................................................................................24126.0026010250
................................................................................................................................................................................AATGGCGATTGTCGGTATAGTC..............................................................................................................................................................................................................................22124.0024000240
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.................................................................................................................................................19123.0023000221
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................19122.0022410170
.....................................................................................................................................................................................CGATTGTCGGTATAGTCTCTTT.........................................................................................................................................................................................................................22120.0020000200
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.................................................................................................................................................20119.0019000190
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.................................................................................................................................................23118.0018000180
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG..................................................................................................................................................22117.0017100070
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTA................................................................................................................................................23117.0017030140
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTT................................................................................................................................................23115.0015030120
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC...................................................................................................................................................21114.0014000140
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCTGC...................................................................................................................................................21113.0013000130
................................................................................................................................................................................AATGGCGATTGTCGGTATAGT...............................................................................................................................................................................................................................21111.0011000110
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT................................................................................................................................................24111.0011000110
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC..................................................................................................................................................20110.001001090
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT...................................................................................................................................................21110.0010000100
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGC..................................................................................................................................................1919.00901080
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTAT..................................................................................................................................................2218.00800080
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG.................................................................................................................................................2318.00800080
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTTT..................................................................................................................................................2218.00800080
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCG.....................................................................................................................................................2117.00700070
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCGT................................................................................................................................................2416.00600060
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGCCT..................................................................................................................................................2216.00600060
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTC......................................................................................................................................................1815.00503020
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC..................................................................................................................................................1815.00501040
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGT..................................................................................................................................................2115.00502030
...........................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT.................................................................................................................................................2415.00502030
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG...................................................................................................................................................2014.00402020
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTAT................................................................................................................................................2414.00400040
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCC................................................................................................................................................2414.00420020
...........................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTG...................................................................................................................................................2214.00401030
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTGA..................................................................................................................................................2414.00400040
..........................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTT...................................................................................................................................................2314.00400040
...................................................................................................................................................................................GGCGATTGTCGGTATAGTCTCTT..........................................................................................................................................................................................................................2314.00400040
.........................................................................................................................................................................................................................................................AAGTGACTAGACCGAACACTCGT....................................................................................................................................................2314.00400040
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGGCT..................................................................................................................................................2214.00400040
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA...................................................................................................................................................2113.00300030
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA.................................................................................................................................................2313.00300030
droVir3
ATATTCC--A--------------------------------------------GTGTTT--CAG-----TG-------------------------------TGACAGTGTTCCAGTATTCCAGTGTTTCAATTCC---------------AATATTCCAGTA-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTTCAAAC-A-A-------TATA----CCATT-AT-----CTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACGTATATA--------A---AAAGCACAA-----------G--------TTC-------TC----GATTTGATAACCGTCGCAATATATATATATA---TATATATCTA--TATCA---T--ATAGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................2312436012.00243601271716461968720113010036335842141414210542562106931859116038191995114939761017122119616719622587918222315371629890114230826462312211078624908047251036028924173063299209540014372398629064112856946104861788420453227931018411169
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................22144003.0044003821106656200000000291001000300010000031601927674200524154305922253161255121084079211638541863125013859859203038146600000156176742101366911669614593334379
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................23116543.001654370226013539000000000000000000000000000000104200001526115424918216127315224310749767200014966000002010296300000921933712
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................19115114.00151148802100000000000000000000000000000000310037741456115514601137993208996718768185196005514501218100000710350011012118201610
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................23110567.0010567546501370000000001000000000000000000000010003545904655102284053810405631125703416623503420119647100001435000001971322
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................2217294.0072943307400000000001000000000000000001007812120145833623253742336563540677831123223017820059149800000252313014100310114512076106
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................2416460.00646041116800000000012000100010000000000190297813254100092322133002432384542434072401631751591004154871200020281203022009467693336
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................2415195.005195020107500000000000000000010000012001003150003262732244013071643192684752621611791441005631830200013142740002116273357
...................................................................................................................................................................................GGCGATTGTCGGTATGGTCGCT...........................................................................................................................................................................................................................2212134.00213400085000000001700000000000000000060641232585990000201601021142712011100014400000404516200203011853587578
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................2411732.00173201118900000000000001010000000010002502267118100000071038910990721285510048302821000316200000148600422103535391419
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................2111460.00146010140294000000000100010020000000442122410148010063942475747575079403038280008618910000612462130433840432824
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................2311130.001130000830000000000000000000000000000405422600002442864502355275231283715010723000000362818700000110224332313
...................................................................................................................................................................................GGCGATTGTCGGTATGGTCGC............................................................................................................................................................................................................................211676.00676100240000000000000000000000000000001003000017127105493325512846161911120001630000035112001001016141215
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................221635.0063510060000000000000000000000000000000001000000403544442271287018181616000229000004820000000152526913
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG..................................................................................................................................................221558.0055847050000000000000000000000000000000000000023425595023513563312246240006330000000101000013230
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.................................................................................................................................................231533.0053300013900000000000000000000000000000000000000127233340163022423721291700026260000000200000000200
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.................................................................................................................................................231409.0040906025700000000000000000000000000000000100000071942931671211000110000010400000030000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT................................................................................................................................................241393.0039300050000000000000000000000000000000010000011516303219532158281729180004400000000200000010021
...........................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT.................................................................................................................................................241315.0031500070000000000000000000000000000000002000004962182183683064360009000000118000000128763
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAG.................................................................................................................................................231151.001510006000000000000000000000000000000000000614899152257217678000250000000200000000100
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................201145.00145000120100000001000000010000000000020200000006243394620110009440000003800002075313
..................................................................................................................................................................................TGGCGATTGTCGGTATGGTCGC............................................................................................................................................................................................................................221141.00141000400000000000000000000000000000000010000018766101661842640001050000011500000021431
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................221126.001261013100000000000000000000000000000000100000076624163123200031200000102000001171534
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTC......................................................................................................................................................181110.00110000300000000000000000000000000000000000001116811931241341640001200000000200000000000
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG................................................................................................................................................241105.001050001300000000000000000000000000001000000000078443123133752000740000010100000020311
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA.................................................................................................................................................23187.008700040000000000000000000000000000000110000019373413331164000100000000600000134710
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA.................................................................................................................................................23170.007000017000000000000000000000000000010013000000332333231020000290000010300000024110
............................................................................................................................................................................................................................................................TGACTAGACCGAACACT.......................................................................................................................................................17167.0067000000000000000000000000000000000000000000131100212002001000000001121000000201153
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................21154.005400022000000000100000000000000000000001000000011015132111000660000001000000000000
...................................................................................................................................................................................GGCGATTGTCGGTATGGTCG.............................................................................................................................................................................................................................20153.005300010000000001000000000000000000000000000000000000000000000600000318000000306123
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG.................................................................................................................................................23145.00450001000000000000000000000000000000001000010111445352223000010000000300000011300
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTTT..................................................................................................................................................22142.00420003000000000000000000000000000000000000001116046252020000330000000100000001010
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT...............................................................................................................................................25136.00360006000000000000000000000000000000058400000110202011000000032000000000000000000
...................................................................................................................................................................................GGCGATTGTCGGTATGGTCGCC...........................................................................................................................................................................................................................22135.003500033000000000000000000000000000000000000000100000000000000000000000100000000000
..................................................................................................................................................................................TGGCGATTGTCGGTATGGTCGCT...........................................................................................................................................................................................................................23131.00310001000000000000000000000000000000101500001111011000000000000000040400000012132
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTGT................................................................................................................................................24128.00280002000000000000000000000000000000000000000120141040421000220000000000000000101
...........................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGC..................................................................................................................................................23128.00280007000000000000000000000000000000000000000040001000000000000000003500000031112
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.................................................................................................................................................20126.00260002000000000000000000000000000000000000000220036041002100120000000000000000000
droMoj3
AGCACA--AA------------------------GGAGGAGTGTTTCAGTTCCAGTGTTT--CAC-----TA-------------------------------T--CAGTGTTTCACT--TTCAGTGTTTCATTTCCAGTGTTCGAAAA----TTA-TAAA--A-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCTCTTTTTCAACA-T-A-------T--------ACACCAAACATTCTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAATTTCAATT------------------------ATAAAATT-TCTAGTGCATGG--T--TC--AAACTTAAAAAGAAAACAAAA-------------------TCTA--TATCG---T--ATAGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................2311201864.00120186419135541225106626611
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.................................................................................................................................................231229220.002292200225002289950
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................221172966.00172966913735201592200
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................24124007.00240070144610225591
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................22110104.0010104026050074990
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC................................................................................................................................................2416588.00658812340063521
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................2114274.00427427120035600
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.................................................................................................................................................2313832.003832020038300
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA................................................................................................................................................2413555.00355513610031930
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.................................................................................................................................................2311832.0018320840017480
...................................................................................................................................................................................GGCGATTGTCGGTATGGTCTCT...........................................................................................................................................................................................................................2211086.0010860100010760
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................2311020.001020075009450
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.................................................................................................................................................221930.00930358008690
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..................................................................................................................................................221776.00776027017480
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.................................................................................................................................................231494.0049409004850
...................................................................................................................................................................................GGCGATTGTCGGTATGGTCTCC...........................................................................................................................................................................................................................221382.0038200003820
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.....................................................................................................................................................191325.0032507003180
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTTC...............................................................................................................................................251277.00277010002670
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT...............................................................................................................................................251241.00241072001690
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................201237.00237296001390
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC.................................................................................................................................................221217.0021700002170
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..................................................................................................................................................221170.0017001001690
................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.................................................................................................................................................191159.00159047001120
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG................................................................................................................................................241136.00136014001220
..............................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.................................................................................................................................................211136.00136013001230
...................................................................................................................................................................................GGCGATTGTCGGTATGGTCTC............................................................................................................................................................................................................................211118.0011804001140
.............................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..................................................................................................................................................211116.0011608001080
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTCC...............................................................................................................................................251103.001030500980
...............................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.................................................................................................................................................20198.009801100870
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT................................................................................................................................................24180.00800700730
droGri2
AAGAAAA--T--A---------ATATAAAATGGCAATT-----T-----TTGCAGTGTTTTGCAGTGTTTTGTGTGTGTTGCAG---------------------------------T---------------------------CAAA----CCCAGCCAGTA-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTGAACCT-AAACTCT---ATAT----ACAATA--------TATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACATAGGCA--------AC----------AGTTTTGGTTAAA--------TAA--T-------AAA------------------------------------TCGATCTA--TGTTT---T--ATAGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.................................................................................................................................................23219.0038533
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..................................................................................................................................................2221.50321
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...................................................................................................................................................2121.00220
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..................................................................................................................................................2220.50110
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.................................................................................................................................................2320.50101
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT....................................................................................................................................................2020.50101
............................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT................................................................................................................................................2420.50101

Generated: 10/20/2015 at 07:33 PM