ID:

dya-mir-285

 Coordinate:

3L:11984790-11984887 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.4 -30.0 -30.0

Flybase annnotation

utr3 [utr3_minus_5513]; pre_miRNA [Dyak\mir-285-RM]; miRNA [Dyak\miR-285-RA]

No Repeatable elements found

Sense Strand Reads

TCCAAAGGGTGCAGGATCGGAATCAGGAGCTACCTTCTTGCCCTACCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAAGACAACCCACTCAATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTCAAATCGAAGCGAACTTCACATGTGCTGTTAAATA

***********************************************..(((..(((((((.(((((..((((.((((((.((((..........................)))))))))).))))..)))))..)))))))..)))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total V058

head

 V052

head

 M026

head

 V120

male body		 M043

female body

 GSM1528802

follicle cells		 M056

embryo

 V046

embryo

 SRR1275484

Male prepupae
.................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................. 23 0 1 53153.00 53153 37994 15009 37 74 38 0 1 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGC............................................................... 22 0 1 20144.00 20144 11870 7002 1157 40 58 0 16 1 0
..............................................................ACTGAGATCGATTGGTGCATAGA................................................................................................................. 23 0 1 15960.00 15960 464 204 15248 36 5 0 2 1 0
.................................................................................................................TAGCACCATTCGAAATCAGTGT............................................................... 22 1 1 6190.00 6190 4376 1745 8 58 2 0 1 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTG................................................................ 21 0 1 3383.00 3383 2137 1027 185 9 25 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCAT.................................................................................................................... 20 0 1 3134.00 3134 85 45 2989 15 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAG.................................................................................................................. 22 0 1 2968.00 2968 136 67 2744 15 5 0 0 0 1
.................................................................................................................TAGCACCATTCGAAATCAGT................................................................. 20 0 1 2824.00 2824 1986 783 12 42 0 0 0 1 0
..............................................................ACTGAGATCGATTGGTGCATAGG................................................................................................................. 23 1 1 1757.00 1757 1 0 1756 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGTT.............................................................. 23 1 1 1408.00 1408 1038 354 0 15 1 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGTGCT.............................................................. 23 1 1 819.00 819 756 63 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGTGCT.............................................................. 23 1 1 755.00 755 637 118 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATA................................................................................................................... 21 0 1 661.00 661 26 9 622 2 0 0 0 0 2
..............................................................ACTGAGATCGATTGGTGCATAGT................................................................................................................. 23 1 1 503.00 503 12 5 485 1 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................. 23 1 1 503.00 503 339 161 0 0 3 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGTGCT.............................................................. 23 1 1 493.00 493 382 111 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGA............................................................... 22 1 1 445.00 445 319 121 3 2 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGCGCT.............................................................. 23 1 1 414.00 414 347 67 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAGAA................................................................................................................ 24 1 1 295.00 295 7 1 284 2 0 0 1 0 0
.............................................................AACTGAGATCGATTGGTGCAT.................................................................................................................... 21 0 1 290.00 290 4 1 284 1 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCA..................................................................................................................... 19 0 1 264.00 264 6 4 254 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAG.................................................................. 19 0 1 264.00 264 179 75 7 0 3 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGTGC............................................................... 22 1 1 250.00 250 220 30 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGTGC............................................................... 22 1 1 214.00 214 161 53 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGCGC............................................................... 22 1 1 211.00 211 168 40 2 1 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCAC.................................................................................................................... 20 1 1 182.00 182 1 0 181 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................. 23 1 1 176.00 176 114 52 9 0 0 0 1 0 0
.................................................................................................................TAGCACCGTTCGAAATCAGTGCT.............................................................. 23 1 1 172.00 172 136 36 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGGGCATAGA................................................................................................................. 23 1 1 170.00 170 2 0 168 0 0 0 0 0 0
.................................................................................................................TAGCACCATGCGAAATCAGTGCT.............................................................. 23 1 1 162.00 162 139 23 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTTCT.............................................................. 23 1 1 152.00 152 113 39 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGTGC............................................................... 22 1 1 141.00 141 103 37 1 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCCGTGCT.............................................................. 23 1 1 136.00 136 114 22 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGGAATCAGTGCT.............................................................. 23 1 1 129.00 129 95 34 0 0 0 0 0 0 0
.............................................................AACTGAGATCGATTGGTGCATAGA................................................................................................................. 24 0 1 124.00 124 5 4 114 0 0 0 0 1 0
.................................................................................................................TAGCACCATTCGAAATCAGGGCT.............................................................. 23 1 1 124.00 124 107 17 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATT................................................................................................................... 21 1 1 120.00 120 1 0 119 0 0 0 0 0 0
.................................................................................................................TAGCACCCTTCGAAATCAGTGCT.............................................................. 23 1 1 112.00 112 85 26 0 1 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAGTCAGTGCT.............................................................. 23 1 1 111.00 111 95 16 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGACATCAGTGCT.............................................................. 23 1 1 110.00 110 93 17 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTAGAAATCAGTGCT.............................................................. 23 1 1 106.00 106 83 23 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................. 24 0 1 106.00 106 82 22 0 1 1 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTTC............................................................... 22 1 1 106.00 106 55 51 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCATTGCT.............................................................. 23 1 1 106.00 106 98 8 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGTGT............................................................... 22 2 1 101.00 101 92 9 0 0 0 0 0 0 0
.................................................................................................................TAGCGCCATTCGAAATCAGTGCT.............................................................. 23 1 1 97.00 97 77 20 0 0 0 0 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGTGCT.............................................................. 23 1 1 95.00 95 76 19 0 0 0 0 0 0 0
.................................................................................................................TAGCACCAGTCGAAATCAGTGCT.............................................................. 23 1 1 95.00 95 84 7 0 0 4 0 0 0 0
.................................................................................................................TGGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 90.00 90 64 26 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGTGT............................................................... 22 2 1 89.00 89 70 19 0 0 0 0 0 0 0
.................................................................................................................CAGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 86.00 86 67 19 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGAGCT.............................................................. 23 1 1 84.00 84 58 26 0 0 0 0 0 0 0
...............................................................CTGAGATCGATTGGTGCATAGA................................................................................................................. 22 0 1 84.00 84 5 2 77 0 0 0 0 0 0
.................................................................................................................TAGCACCATGCGTAATCAGTGCT.............................................................. 23 2 1 79.00 79 64 15 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCACTGCT.............................................................. 23 1 1 78.00 78 71 7 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGGGC............................................................... 22 1 1 78.00 78 62 15 1 0 0 0 0 0 0
.................................................................................................................TAGCACCATCCGAAATCAGTGCT.............................................................. 23 1 1 78.00 78 59 19 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAGAT................................................................................................................ 24 0 1 77.00 77 2 0 75 0 0 0 0 0 0
.................................................................................................................TAGCACCACTCGAAATCAGTGCT.............................................................. 23 1 1 75.00 75 55 19 0 0 1 0 0 0 0
.................................................................................................................TAACACCATTCGAAATCAGTGCT.............................................................. 23 1 1 73.00 73 55 18 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCCAAATCAGTGCT.............................................................. 23 1 1 69.00 69 48 21 0 0 0 0 0 0 0
................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................. 24 0 1 69.00 69 46 23 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCGGTGCT.............................................................. 23 1 1 69.00 69 54 15 0 0 0 0 0 0 0
.................................................................................................................TAGCACCGTTCGAAATCAGTGC............................................................... 22 1 1 68.00 68 54 14 0 0 0 0 0 0 0
.................................................................................................................AAGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 68.00 68 52 16 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATAAGTGCT.............................................................. 23 1 1 68.00 68 56 12 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCACTCAGTGCT.............................................................. 23 2 1 68.00 68 60 8 0 0 0 0 0 0 0
.................................................................................................................TAGCAACATTCGAAATCAGTGCT.............................................................. 23 1 1 68.00 68 54 14 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGTTCT.............................................................. 23 2 1 67.00 67 43 24 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATGG.................................................................................................................. 22 1 1 67.00 67 0 0 67 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAAGCAGTGCT.............................................................. 23 1 1 65.00 65 54 11 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAACCAGTGCT.............................................................. 23 1 1 64.00 64 50 14 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................. 23 1 1 63.00 63 41 21 1 0 0 0 0 0 0
.................................................................................................................TAGCACCGTTCGTAATCAGTGCT.............................................................. 23 2 1 62.00 62 45 17 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGGGCAT.................................................................................................................... 20 1 1 59.00 59 0 0 58 1 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTCCT.............................................................. 23 1 1 58.00 58 53 4 0 1 0 0 0 0 0
.................................................................................................................TATCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 57.00 57 40 13 3 1 0 0 0 0 0
.................................................................................................................TAGCACCATTCAAAATCAGTGCT.............................................................. 23 1 1 56.00 56 31 25 0 0 0 0 0 0 0
.............................................................AACTGAGATCGATTGGTGCATAG.................................................................................................................. 23 0 1 56.00 56 7 1 48 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGTG................................................................ 21 1 1 55.00 55 47 8 0 0 0 0 0 0 0
.................................................................................................................TAGCACTATTCGAAATCAGTGCT.............................................................. 23 1 1 55.00 55 41 14 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCTAAATCAGTGCT.............................................................. 23 1 1 54.00 54 45 9 0 0 0 0 0 0 0
.................................................................................................................TAGCAGCATTCGAAATCAGTGCT.............................................................. 23 1 1 54.00 54 48 6 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGAT.............................................................. 23 1 1 54.00 54 37 16 0 0 1 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCACTGC............................................................... 22 1 1 52.00 52 46 6 0 0 0 0 0 0 0
..................................................................................................................AGCACCATTCGAAATCAGTGC............................................................... 21 0 1 50.00 50 28 9 7 0 6 0 0 0 0
..................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................. 22 0 1 49.00 49 37 12 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................. 23 2 1 49.00 49 36 13 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAGC................................................................................................................. 23 1 1 49.00 49 10 0 39 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCATTGC............................................................... 22 1 1 48.00 48 40 8 0 0 0 0 0 0 0
.................................................................................................................TCGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 48.00 48 41 7 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGTGT............................................................... 22 2 2 47.00 94 77 17 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGGGCATAG.................................................................................................................. 22 1 1 47.00 47 0 0 47 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGT................................................................. 20 1 1 46.00 46 43 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAGATCAGTGCT.............................................................. 23 1 1 45.00 45 29 16 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCAG.................................................................................................................... 20 1 1 44.00 44 1 0 43 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAATTCAGTGCT.............................................................. 23 1 1 44.00 44 44 0 0 0 0 0 0 0 0
................................................................................................................CTAGCACCATTCGAAATCAGTGC............................................................... 23 0 1 43.00 43 35 6 2 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGTG................................................................ 21 1 1 42.00 42 30 12 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGAGC............................................................... 22 1 1 42.00 42 29 10 3 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCCTAGA................................................................................................................. 23 1 1 41.00 41 2 1 38 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTACT.............................................................. 23 1 1 41.00 41 28 13 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATTT.................................................................................................................. 22 2 1 41.00 41 3 0 38 0 0 0 0 0 0
.................................................................................................................TAGAACCATTCGAAATCAGTGCT.............................................................. 23 1 1 41.00 41 38 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCCGTGC............................................................... 22 1 1 40.00 40 26 14 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGTG................................................................ 21 1 1 40.00 40 26 14 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAGAAA............................................................................................................... 25 1 1 40.00 40 1 0 39 0 0 0 0 0 0
.................................................................................................................TAGCATCATTCGAAATCAGTGCT.............................................................. 23 1 1 40.00 40 25 14 1 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAGTCAGTGC............................................................... 22 1 1 39.00 39 27 11 1 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGG............................................................... 22 1 1 39.00 39 15 7 17 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTTCATAGA................................................................................................................. 23 1 1 39.00 39 0 1 38 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGACATCAGT................................................................. 20 1 1 38.00 38 36 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAATGCT.............................................................. 23 1 1 38.00 38 19 19 0 0 0 0 0 0 0
.................................................................................................................TAGCCCCATTCGAAATCAGTGCT.............................................................. 23 1 1 38.00 38 34 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGCGT............................................................... 22 2 1 38.00 38 32 5 0 1 0 0 0 0 0
.................................................................................................................TAGCACCGTGCGTAATCAGTGCT.............................................................. 23 3 1 38.00 38 31 7 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATGCGAAATCAGTGC............................................................... 22 1 1 37.00 37 32 5 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTT................................................................ 21 1 1 37.00 37 27 9 1 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGCGCATAGA................................................................................................................. 23 1 1 36.00 36 6 3 26 1 0 0 0 0 0
.................................................................................................................TAGCACCATTTGAAATCAGTGCT.............................................................. 23 1 1 36.00 36 29 7 0 0 0 0 0 0 0
.................................................................................................................TAGCAGCATTCGTAATCAGTGCT.............................................................. 23 2 1 36.00 36 28 8 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGT................................................................. 20 1 1 35.00 35 28 7 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAT.................................................................................................................. 22 1 1 35.00 35 0 0 35 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTTT............................................................... 22 2 1 34.00 34 25 7 2 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGAGCATAGA................................................................................................................. 23 1 1 33.00 33 3 0 30 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGGGCT.............................................................. 23 2 1 32.00 32 28 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACCCTTCGAAATCAGTGC............................................................... 22 1 1 32.00 32 27 5 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATCCGAAATCAGTGC............................................................... 22 1 1 32.00 32 24 8 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCCAAATCAGTGC............................................................... 22 1 1 31.00 31 25 4 2 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTCC............................................................... 22 1 1 31.00 31 29 2 0 0 0 0 0 0 0
.................................................................................................................TTGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 31.00 31 27 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACCAGTCGAAATCAGTGC............................................................... 22 1 1 31.00 31 25 5 0 0 1 0 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGTGC............................................................... 22 1 1 30.00 30 22 7 1 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAAGCAGTGC............................................................... 22 1 1 30.00 30 26 4 0 0 0 0 0 0 0
.................................................................................................................TAGCAGCATGCGTAATCAGTGCT.............................................................. 23 3 1 30.00 30 24 6 0 0 0 0 0 0 0
.................................................................................................................TAACACCATTCGAAATCAGTGC............................................................... 22 1 1 29.00 29 17 12 0 0 0 0 0 0 0
.................................................................................................................TAGCACCTTTCGAAATCAGTGCT.............................................................. 23 1 1 29.00 29 24 5 0 0 0 0 0 0 0
.................................................................................................................TAGCGCCATTCGAAATCAGTGC............................................................... 22 1 1 28.00 28 22 6 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGTTGCATAG.................................................................................................................. 22 1 1 28.00 28 0 0 28 0 0 0 0 0 0
.................................................................................................................GAGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 27.00 27 19 8 0 0 0 0 0 0 0
.................................................................................................................TACCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 27.00 27 24 2 1 0 0 0 0 0 0
..............................................................ACTGAGATCGATTTGTGCATAGA................................................................................................................. 23 1 1 27.00 27 0 0 27 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGGAATCAGTGC............................................................... 22 1 1 27.00 27 20 7 0 0 0 0 0 0 0
.................................................................................................................TAGTACCATTCGAAATCAGTGCT.............................................................. 23 1 1 27.00 27 19 8 0 0 0 0 0 0 0
.................................................................................................................TAGCACCGTTCGAAATCAGTGT............................................................... 22 2 1 27.00 27 18 9 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGCG................................................................ 21 1 1 26.00 26 23 1 1 1 0 0 0 0 0
.................................................................................................................TGGCACCATTCGAAATCAGTGC............................................................... 22 1 1 26.00 26 16 9 1 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATTAGTGCT.............................................................. 23 1 1 26.00 26 18 8 0 0 0 0 0 0 0
.................................................................................................................TAGCACTATTCGAAATCAGTGC............................................................... 22 1 1 26.00 26 11 14 1 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGGGCATAGG................................................................................................................. 23 2 1 25.00 25 0 0 25 0 0 0 0 0 0
.................................................................................................................TAGCACCGTTCGTAATCAGTGC............................................................... 22 2 1 25.00 25 22 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGTGTT.............................................................. 23 2 1 25.00 25 24 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTAC............................................................... 22 1 1 25.00 25 17 5 3 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGT................................................................. 20 1 1 25.00 25 16 9 0 0 0 0 0 0 0
..............................................................ACTGAGGTCGATTGGTGCATAGA................................................................................................................. 23 1 1 25.00 25 2 0 23 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTA................................................................ 21 1 1 24.00 24 17 7 0 0 0 0 0 0 0
.............................................................AACTGAGATCGATTGGTGCATT................................................................................................................... 22 1 1 24.00 24 2 0 22 0 0 0 0 0 0
.................................................................................................................TAGCACCATTAGAAATCAGTGC............................................................... 22 1 1 24.00 24 10 13 1 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTCCATAGA................................................................................................................. 23 1 1 23.00 23 1 0 22 0 0 0 0 0 0
.................................................................................................................TAGCACCCTTCGAACTCAGTGCT.............................................................. 23 2 1 23.00 23 23 0 0 0 0 0 0 0 0
.................................................................................................................CAGCACCATTCGAAATCAGTGC............................................................... 22 1 1 23.00 23 13 8 2 0 0 0 0 0 0
.................................................................................................................TAGCACCATCTGAAATCGGT................................................................. 20 3 5 23.00 115 0 0 0 0 0 115 0 0 0
.................................................................................................................TAGCAACATTCGAAATCAGTGC............................................................... 22 1 1 23.00 23 16 6 1 0 0 0 0 0 0
.................................................................................................................TAGGACCATTCGAAATCAGTGCT.............................................................. 23 1 1 22.00 22 20 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATAAGTGC............................................................... 22 1 1 22.00 22 17 4 1 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCTTAATCAGTTCT.............................................................. 23 3 1 22.00 22 15 7 0 0 0 0 0 0 0
.................................................................................................................TAGCACCACTCGAAATCAGTGC............................................................... 22 1 1 22.00 22 12 7 2 0 1 0 0 0 0
..............................................................ACTGAGATCGATTGGTGC...................................................................................................................... 18 0 1 22.00 22 0 0 21 0 1 0 0 0 0
.................................................................................................................TAGCACCATTCGAAACCAGTGC............................................................... 22 1 1 22.00 22 16 4 2 0 0 0 0 0 0
.................................................................................................................TAGCACCGTTCGGAATCAGTGCT.............................................................. 23 2 1 21.00 21 19 2 0 0 0 0 0 0 0
..............................................................GCTGAGATCGATTGGTGCATAGA................................................................................................................. 23 1 1 21.00 21 1 0 20 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCAAAATCAGTGC............................................................... 22 1 1 21.00 21 9 12 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCCGTGT............................................................... 22 2 1 21.00 21 17 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGCTCT.............................................................. 23 2 1 21.00 21 14 7 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAA.................................................................................................................. 22 1 1 21.00 21 0 1 20 0 0 0 0 0 0
...................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................. 21 0 1 21.00 21 15 6 0 0 0 0 0 0 0
....................................................................................................................CACCATTCGAAATCAGTG................................................................ 18 0 1 21.00 21 12 6 3 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCCGTGCT.............................................................. 23 2 1 21.00 21 19 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGCGCT.............................................................. 23 2 1 20.00 20 17 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGACATCAGTGC............................................................... 22 1 1 20.00 20 17 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAGTCAGTGT............................................................... 22 2 1 20.00 20 16 4 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAC.................................................................................................................. 22 1 1 20.00 20 2 0 18 0 0 0 0 0 0
.................................................................................................................TAGCCCCATTCGAAATCAGTGC............................................................... 22 1 1 20.00 20 16 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATGCGAAATCAGTGT............................................................... 22 2 1 20.00 20 17 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCTGTGCT.............................................................. 23 1 1 20.00 20 17 3 0 0 0 0 0 0 0
...............................................................CTGAGATCGATTGGTGCATAGAT................................................................................................................ 23 0 1 19.00 19 0 0 19 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAAACAGTGCT.............................................................. 23 1 1 19.00 19 13 6 0 0 0 0 0 0 0
.................................................................................................................TAGCAGCATGCGAAATCAGTGCT.............................................................. 23 2 1 19.00 19 17 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATGCGTAATCAGTGC............................................................... 22 2 1 19.00 19 14 5 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGTGTT.............................................................. 23 2 1 19.00 19 19 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGACATCAGTGT............................................................... 22 2 2 18.50 37 32 5 0 0 0 0 0 0 0
.................................................................................................................TAGCACGATTCGAAATCAGTGCT.............................................................. 23 1 1 18.00 18 17 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGGAATCAGTGT............................................................... 22 2 1 18.00 18 14 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACCGTGCGAAATCAGTGCT.............................................................. 23 2 1 18.00 18 18 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGTTT............................................................. 24 1 1 18.00 18 12 6 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCTAAATCAGTGC............................................................... 22 1 1 17.00 17 9 4 4 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGACCTCAGTGCT.............................................................. 23 2 1 17.00 17 17 0 0 0 0 0 0 0 0
.................................................................................................................AAGCACCATTCGAAATCAGTGC............................................................... 22 1 1 17.00 17 14 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAGATCAGTGC............................................................... 22 1 1 17.00 17 9 8 0 0 0 0 0 0 0
.................................................................................................................TAGCAGCATTCGAAATCAGTGC............................................................... 22 1 1 17.00 17 15 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATACGAAATCAGTGCT.............................................................. 23 1 1 16.00 16 13 3 0 0 0 0 0 0 0
.................................................................................................................TACCACCATTCGAAATCAGTGC............................................................... 22 1 1 16.00 16 14 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAATCCGTGCT.............................................................. 23 2 1 16.00 16 13 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTAGAAATCAGTGT............................................................... 22 2 1 16.00 16 13 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCGGTGC............................................................... 22 1 1 16.00 16 11 5 0 0 0 0 0 0 0
.................................................................................................................TAGCACCCTTCGAAATCAGTGT............................................................... 22 2 1 15.00 15 11 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCCGT................................................................. 20 1 1 15.00 15 13 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTGGAAATCAGTGCT.............................................................. 23 1 1 15.00 15 11 4 0 0 0 0 0 0 0
.............................................................AACTGAGATCGATTGGTGCAC.................................................................................................................... 21 1 1 15.00 15 0 0 15 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGC................................................................. 20 1 1 15.00 15 13 1 1 0 0 0 0 0 0
.............................................................AACTGAGATCGATTGGTGCATA................................................................................................................... 22 0 1 15.00 15 1 1 13 0 0 0 0 0 0
.................................................................................................................TAGCACCGTTCGAAATCAGCGCT.............................................................. 23 2 1 15.00 15 13 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGGGT............................................................... 22 2 1 15.00 15 12 3 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTTCATAG.................................................................................................................. 22 1 1 15.00 15 0 0 15 0 0 0 0 0 0
...............................................................CTGAGATCGATTGGTGCATAGT................................................................................................................. 22 1 1 14.00 14 0 0 14 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCACTCAGTGC............................................................... 22 2 1 14.00 14 13 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGCGTT.............................................................. 23 2 1 14.00 14 12 2 0 0 0 0 0 0 0
.................................................................................................................TAGAACCATTCGAAATCAGTGC............................................................... 22 1 1 14.00 14 11 3 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGGGCATA................................................................................................................... 21 1 1 14.00 14 1 0 13 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGTTGCATAGA................................................................................................................. 23 1 1 14.00 14 4 0 10 0 0 0 0 0 0
.............................................................AACTGAGATCGATTGGTGCATAGG................................................................................................................. 24 1 1 14.00 14 0 0 14 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGGT.............................................................. 23 1 1 14.00 14 6 8 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATGCGAAATCAGTG................................................................ 21 1 1 13.00 13 11 2 0 0 0 0 0 0 0
................................................................TGAGATCGATTGGTGCATAGAT................................................................................................................ 22 0 1 13.00 13 3 2 8 0 0 0 0 0 0
.................................................................................................................TAGCACCAGTCGCAATCAGTGCT.............................................................. 23 2 1 13.00 13 10 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCTTTCGAAATCAGTGC............................................................... 22 1 1 13.00 13 9 2 2 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGCGCT.............................................................. 23 2 1 13.00 13 12 1 0 0 0 0 0 0 0
.................................................................................................................TGGCACCATTCGTAATCAGTGCT.............................................................. 23 2 1 13.00 13 10 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTTGAAATCGGT................................................................. 20 2 1 13.00 13 0 0 0 0 0 13 0 0 0
..............................................................ACTGAGATCGATTGGTACATAGA................................................................................................................. 23 1 1 13.00 13 2 0 11 0 0 0 0 0 0
...............................................................CTGAGATCGATTGGTGCATAG.................................................................................................................. 21 0 1 13.00 13 0 0 12 1 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAATGC............................................................... 22 1 1 13.00 13 6 7 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCACTGT............................................................... 22 2 1 13.00 13 13 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACTGTTCGGAATCAGTGCT.............................................................. 23 3 1 13.00 13 12 1 0 0 0 0 0 0 0
..................................................................................................................AGCACCATTCGAAATCAGTGT............................................................... 21 1 1 13.00 13 10 3 0 0 0 0 0 0 0
.................................................................................................................TAGCTCCATTCGAAATCAGTGCT.............................................................. 23 1 1 13.00 13 11 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCAGTCGTAATCAGTGCT.............................................................. 23 2 1 13.00 13 13 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATTAGTGC............................................................... 22 1 1 13.00 13 9 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAGTCAGTGCT.............................................................. 23 2 1 13.00 13 13 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCATTG................................................................ 21 1 1 13.00 13 13 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCCGTGTT.............................................................. 23 2 1 13.00 13 13 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGTGTT.............................................................. 23 2 2 12.50 25 22 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGGG................................................................ 21 1 1 12.00 12 7 1 3 1 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGCTC............................................................... 22 2 1 12.00 12 5 7 0 0 0 0 0 0 0
.................................................................................................................TAGCACCGTTCGAAATCAGTG................................................................ 21 1 1 12.00 12 7 4 1 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAGTCAGTGCT.............................................................. 23 2 1 12.00 12 12 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGTTC............................................................... 22 2 2 12.00 24 18 6 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGTGA............................................................... 22 2 1 12.00 12 9 3 0 0 0 0 0 0 0
.................................................................................................................TCGCACCATTCGAAATCAGTGC............................................................... 22 1 1 12.00 12 10 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCTAAATCAGTTCT.............................................................. 23 2 1 12.00 12 11 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCTC............................................................. 24 1 1 12.00 12 9 3 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCATCGA................................................................................................................. 23 1 1 12.00 12 4 0 8 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCTGTGC............................................................... 22 1 1 12.00 12 10 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGCGCT.............................................................. 23 2 1 11.00 11 10 1 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGAGCATAG.................................................................................................................. 22 1 1 11.00 11 1 0 10 0 0 0 0 0 0
.................................................................................................................TAGTACCATTCGAAATCAGTGC............................................................... 22 1 1 11.00 11 8 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTACAAATCAGTGCT.............................................................. 23 2 1 11.00 11 10 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGTC.............................................................. 23 2 1 11.00 11 9 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATGCGTAACCAGTGCT.............................................................. 23 3 1 11.00 11 10 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGCGCT.............................................................. 23 2 1 11.00 11 10 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGATATCAGTGCT.............................................................. 23 1 1 11.00 11 10 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCCTTCGAAATCAGCGCT.............................................................. 23 2 1 11.00 11 8 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATGCGAAATCAGCGCT.............................................................. 23 2 1 11.00 11 7 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACCGTCCGGAATCAGTGCT.............................................................. 23 3 1 11.00 11 10 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTTGAAATCAGTGC............................................................... 22 1 1 11.00 11 4 7 0 0 0 0 0 0 0
..............................................................ACCGAGATCGATTGGTGCATAGA................................................................................................................. 23 1 1 11.00 11 0 0 11 0 0 0 0 0 0
.................................................................................................................TAGCAGCGTTCGTAATCAGTGCT.............................................................. 23 3 1 11.00 11 11 0 0 0 0 0 0 0 0
.................................................................................................................TATCACCATTCGAAATCAGTGC............................................................... 22 1 1 11.00 11 7 2 2 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGGGC............................................................... 22 2 1 11.00 11 8 3 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCG..................................................................................................................... 19 1 1 11.00 11 0 0 11 0 0 0 0 0 0
.................................................................................................................TGGCACCGTTCGTAATCAGTGCT.............................................................. 23 3 1 11.00 11 10 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAACGCAGTGCT.............................................................. 23 2 1 10.00 10 9 1 0 0 0 0 0 0 0
.............................................................AACTGAGATCGATTGGTGCATAGT................................................................................................................. 24 1 1 10.00 10 0 0 10 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCGGTGT............................................................... 22 2 1 10.00 10 7 3 0 0 0 0 0 0 0
.................................................................................................................TAGCAACATTCGAAAGCAGTGCT.............................................................. 23 2 1 10.00 10 7 3 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGCGC............................................................... 22 2 1 10.00 10 10 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAAATCATTGT............................................................... 22 2 1 10.00 10 9 1 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCCTAG.................................................................................................................. 22 1 1 10.00 10 2 0 8 0 0 0 0 0 0
.................................................................................................................TAGCACCGTGCGTAATCAGTGC............................................................... 22 3 1 10.00 10 6 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGAACTCCGTGC............................................................... 22 2 1 10.00 10 10 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACCCTTCGAAATCCGTGCT.............................................................. 23 2 1 10.00 10 8 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCTAAATCATTGCT.............................................................. 23 2 1 10.00 10 9 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCGTTCGGAATCGGTGCT.............................................................. 23 3 1 10.00 10 10 0 0 0 0 0 0 0 0
.................................................................................................................TAGCACTATTCGAAATCAGTGT............................................................... 22 2 1 10.00 10 4 6 0 0 0 0 0 0 0
.................................................................................................................TAGCATCATTCGAAATCAGTGT............................................................... 22 2 1 10.00 10 6 4 0 0 0 0 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGCGC............................................................... 22 2 1 10.00 10 9 1 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGGAATCAGGGCT.............................................................. 23 2 1 10.00 10 9 1 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTCCATAG.................................................................................................................. 22 1 1 10.00 10 0 0 9 1 0 0 0 0 0
.............................................................AACTGAGATCGATTGGTGCATTT.................................................................................................................. 23 2 1 10.00 10 0 0 10 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGACATCAGTGTT.............................................................. 23 2 2 10.00 20 18 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTAGAAATAAGTGCT.............................................................. 23 2 1 9.00 9 7 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCGTTCGTAGTCAGTGCT.............................................................. 23 3 1 9.00 9 8 1 0 0 0 0 0 0 0
.................................................................................................................TGGCACCATTCGGAATCAGGGCT.............................................................. 23 3 1 9.00 9 9 0 0 0 0 0 0 0 0
....................................................................................................................CACCATTCGAAATCAGTGC............................................................... 19 0 1 9.00 9 1 0 8 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGCTGCATAGA................................................................................................................. 23 1 1 9.00 9 1 1 7 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGGGCT.............................................................. 23 2 1 9.00 9 7 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGT................................................................. 20 1 1 9.00 9 8 1 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTGGTGCCT.................................................................................................................... 20 1 1 9.00 9 1 0 8 0 0 0 0 0 0
.................................................................................................................TAGCACCAGTCGTAATCAGGGCT.............................................................. 23 3 1 9.00 9 7 2 0 0 0 0 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGGGC............................................................... 22 2 1 9.00 9 9 0 0 0 0 0 0 0 0
..............................................................ACTGAGATCGATTCGTGCATAG.................................................................................................................. 22 1 1 9.00 9 0 0 9 0 0 0 0 0 0

Anti-sense strand reads

AGGTTTCCCACGTCCTAGCCTTAGTCCTCGATGGAAGAACGGGATGGTGAAGCTTAGCTTCTTGACTCTAGCTAACCACGTATCTATAGTTCTGTTGGGTGAGTTAAGTTGAGATCGTGGTAAGCTTTAGTCACGAAAACTATTCTTTGTTAGTCGCTTCACAGTTTAGCTTCGCTTGAAGTGTACACGACAATTTAT

***********************************************..(((..(((((((.(((((..((((.((((((.((((..........................)))))))))).))))..)))))..)))))))..)))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M043

female body

 V058

head

 V120

male body		 GSM1528802

follicle cells
...........................................................................................................................TCTTTGGACACGAAAACTAT....................................................... 20 3 19 0.37 7 7 0 0 0
...................................ACAACGGGATGGTGAACC................................................................................................................................................. 18 2 6 0.33 2 2 0 0 0
............................................................CTTGACTCAAGCTTACCACGAA.................................................................................................................... 22 3 3 0.33 1 0 1 0 0
........................CCCTCGATTGAAGAACGGAA.......................................................................................................................................................... 20 3 4 0.25 1 1 0 0 0
.................GCCTCAGTCCTCGTTGGA................................................................................................................................................................... 18 2 4 0.25 1 0 1 0 0
.................................GGACAACGGGATGGTGAACC................................................................................................................................................. 20 3 7 0.14 1 1 0 0 0
.................................GGACAACGGGATGGTGAA................................................................................................................................................... 18 2 7 0.14 1 0 0 1 0
...........................................................................................................GTTGCGATCGGGGGAAGCT........................................................................ 19 3 8 0.13 1 1 0 0 0
.............................................................TTGACTAAAGCTTACCACGTA.................................................................................................................... 21 3 10 0.10 1 0 1 0 0
...................................................................................................................................................................................AGTGTAGACGACAAT.... 15 1 13 0.08 1 0 0 0 1
..................................GACAACGGGATGGTGAACC................................................................................................................................................. 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droYak3 3L:11984740-11984937 - dya-mir-285 Known_mirbase TCC--A--------------AAGGGT-----------GCA------GGATCG---GAA--------TCAGGAGCTACC-------T-T----------------C--------------TTGCC---CTACCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGACA--ACCCACTC---------AA-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC-------------A-AATCGAAGCGAACTTCA-CATGTG-------CTGTTAAATA
droEre2 scaffold_4784:11929844-11930046 - der-mir-285 Known_mirbase TCC--A--------------AGGGGT-----------GCA------GGATCG---GTA--------GCAGGAGCTACCTTCAGG-A-G-------------------------------CTGCA---CTCCCACTTCGAGTCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGAAG--CCCCACTC---------AA-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGGAGTGTC-------------A-AATCGGAGCGAACTTCA-AATGTG-------CTGTTGAATA
droSec2 scaffold_0:4127778-4127975 - dse-mir-285 Known_mirbase TGC--A--------------AAGGGT-----------TCA------GGATCG---GAA--------ACAGGAGCTACC-------A-A----------------C--------------TTGCC---CATCCACTTCAAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAAA--ACCCACTC---------AA-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC-------------A-AATCGAAGCGAACTTCA-AATGTG-------CTGTTAAATA
droSim2 3l:11642944-11643141 - dsi-mir-285 Known_mirbase TCC--A--------------AAGGGT-----------TCA------GGATCG---GAA--------ACAGGAGCTACC-------A-G----------------C--------------TTGCC---CAGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAAA--ACCCACTC---------AA-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC-------------A-AATCAAAGCGAACTTCA-AATGTG-------CTGTTAAATA
dm3 chr3L:11939144-11939341 - dme-mir-285 Known_mirbase TCC--A--------------AAGGGT-----------TCA------GGATCG---GAA--------ACAGGAGCTACC-------T-A----------------C--------------TTGCC---CTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAGA--ACCCACTC---------AA-TTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC-------------A-AATCGAAGCGAACTTCA-AATGTG-------CTGTTAAATA
droEug1 scf7180000409466:4030499-4030674 - TCC--A--------------AAGGGT-----------GCA------GGATCG---GAC------------------------------------------------------------------------TCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAA--ACATACTC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGCC-------------TTAATCGAAGTGATTTTTA-AGTGAA-------ACTTTAAATA
droBia1 scf7180000302428:4183349-4183545 - TCC--A--------------AAGGGT-----------GCA------GGATCG---CAG--------TGGGGAGCA-C----------------------------------------------T---CTTCCCCTTCGAATCGAAGAACTGAGATCGACTGGTGCATAGATAT----CAGGGAA--AGCCACCC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAGCAATCAGCAGAGTGTC-------------TCGCTCGGAGTGAATTTCA-ACGCTGCCCCGCCTCTCCAACGA
droTak1 scf7180000415741:177968-178158 + TCC--A--------------AAGGGT-----------GCA------GGATCG---AAA--------TCTGGAGCA-C--------T-G----------------C--------------TCGC----------CTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAAA-ACCCACTC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGTC-------------TCAATCGAAGTGAACTCCA-GAAGTG-------TCTTCGGCGA
droEle1 scf7180000491193:3850517-3850703 - TTC--A--------------AAAGTG-----------GCA------GGATCG---GAAAA------AAAGGAGCT-------------------------------------------------------CTTCTTCGAATCGAAGAACTGAGCTCGATTGGTGCATAGATAT----CAAGGGA--ACCCGCTC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGTC-------------TTAATCGAAGTGAATTTTT-ACTGTG-------CCTCTAAAGA
droRho1 scf7180000780179:29897-30094 + TCC--A--------------AAAGTG-----------GCA------GGATCG---AAA--------TCAGGAGCT-CC-------A-T----------------C---------------CACCC--AGCACACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGGA--ACCCGCTC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGCC-------------TTAATCGAAGTGAATTTTA-AATGAG-------CCTTCGAATA
droFic1 scf7180000454113:2711039-2711225 + CCC--G--------------AAATCG-----------GCA------GGATGG---GTA--------TCAAGAATCAGG-------AAT----------------C---------------CACAC--AGAAGCCTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATAC--CAAGGAA--ACCCGCTC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGTC-------------GCAAGCAAAGCCAACTTCA-A----------------------
droKik1 scf7180000302391:881221-881420 + CG---------------------GCG-----------GCA------GGATCG---CA------------GGATT-----TGAGGGAGT----------------GC-------------ATACCG--AGGACAGTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAGACACCCGCTT---------AT--TTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCAATCAGCAGAGTGTC-------------G-AAAAAATACAAACATTA-ACTGTG--TGAACGTTTCAAGAA
droAna3 scaffold_13337:6191313-6191498 - dan-mir-285 Known_mirbase CTT--G--------------AAGGCAACAGGATCATC--------------A---TTG--------ACAGGA----TT-------A-G----------------C--------------TAGCC---AGGATAATTCGAATCAAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAG--ATCCGATC---------AT-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACAGA---------TAAAGTGTTT----------------TG-TGTGTG-------TTTTTCAACA
droBip1 scf7180000396419:132602-132789 - AGATTG--------------GAACTACCAGGACCTAC--------------A---CTG--------ACAGGA----TT-------A-G----------------C--------------TAGCC---AGGATAATTCGAATCAAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAG--ATCCGATC---------AT-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACCAA---------TAAAGTGTTC----------------TG-TGTGTG-------TTTTTCTACA
dp5 XR_group6:1929740-1929934 - dps-mir-285 Known_mirbase GAG--A--------------CCAGGA-----------GCA------GCCGAG----CA--------GCAGGA-CA--C-------T-T----------------C--------------TTACA---ATTACAGTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGAGG--ACTCGCTA---------ATTTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGA-----------AAGTGTTT-CTCCAAAGTGATTTTTTTTCAGTG-------C---ATGACA
droWil2 scf2_1100000004762:5768841-5769005 + dwi-mir-285 Known_mirbase ATG--GGGATCCCTATGACATTAAGG-----------ACA------TAC---------------------------GG-------A------------------C---------------CACAT-ACAAATTGTTCGAATTAAAGAACTGAGATCGATTGGTGCATAGATAA----TATGCGA--ATTCTATCATTTGATTTCA-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATTAGAACCAATCAACAA--------------------------------------------------------------
droVir3 scaffold_13049:21101378-21101579 + dvi-mir-285 Known_mirbase AA-------------------GTGCT-----------TCA------ATATAT---ATA--TATATATATAGA----------------CTAATACGACACCCAACTA----------TG-CA-C---CAGCCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATATCGCCC--AAAA--AGTAATTC---------AT-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTCGAACCGATCAGCGGCGCATCAAAAC-AAGTGTTT----------------CG-CGTGTA-------TT--------
droMoj3 scaffold_6680:15475321-15475557 + dmo-mir-285 Known_mirbase TAA--A--------------AAAAAT-----------GAA------GTAGTGCCTAGATA------ATATTA---------------TCTATTATGCCACACACCCAGCAGACATCAAA-CACC---ACACCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATAACGCCC-AAAAA--GTCATTTT---------AT-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTGGAACCGATCAACGGTGTATGGGAAC-AAGTGTCT-A---ACAGTGATCTATG-AATATG-------TTGCGAAAGA
droGri2 scaffold_15110:22570063-22570259 - dgr-mir-285 Known_mirbase TAC--A--------------AT---------------GAAGGAGCAGT--C-----AA--------TCA----CTAAT-------AAC----------------C---------------TATGTAGCAGCCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATATCGTCCAAGA----ATAATTTA---------AT-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTGTATTGGAACCGATCAGCGGCGCATTAGCACAAAGTGTTTC-----AAGTGATTTATCAAA-----------------AGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droYak3
TCC--A--------------AAGGGT-----------GCA------GGATCG---GAA--------TCAGGAGCTACC-------T-T----------------C--------------TTGCC---CTACCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGACA--ACCCACTC---------AA-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC-------------A-AATCGAAGCGAACTTCA-CATGTG-------CTGTTAAATASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................23153153.00531533738101500937994740000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................22120144.0020144115758161700211870400000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................23115960.001596015248521204464360000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT.....................................................................................2216190.006190821017454376580000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................2113383.00338318525001027213790000
...................................................................................................................................................ACTGAGATCGATTGGTGCAT..........................................................................................................................................................2013134.00313429890004585150000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAG........................................................................................................................................................2212968.002968274450067136150010
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGT.......................................................................................2012824.002824120017831986420000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGG.......................................................................................................................................................2311757.00175717560000100000
...................................................................................................................................................ACTGAGATCGATTGGTGCATA.........................................................................................................................................................211661.0066162200092620020
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................231503.0050348500051210000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA....................................................................................231503.00503030016133900000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA.....................................................................................221445.00445300012131920000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................241295.002952840101720000
..................................................................................................................................................AACTGAGATCGATTGGTGCAT..........................................................................................................................................................211290.002902840001410000
...................................................................................................................................................ACTGAGATCGATTGGTGCA...........................................................................................................................................................191264.002642540004600000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAG........................................................................................191264.0026473007517900000
...................................................................................................................................................ACTGAGATCGATTGGTGCAC..........................................................................................................................................................201182.001821810000100000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC....................................................................................231176.0017690105211400000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................241124.001241140014500000
...................................................................................................................................................ACTGAGATCGATTGGTGCATT.........................................................................................................................................................211120.001201190000100000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT...................................................................................241106.001060100228210000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGA.......................................................................................................................................................22184.0084770002500000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAT......................................................................................................................................................24177.0077750000200000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT....................................................................................24169.00690000234600000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG....................................................................................23163.00631000214100000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAG........................................................................................................................................................23156.0056480001700000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC.....................................................................................21150.0050760092800000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT....................................................................................22149.00490000123700000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA....................................................................................23149.00490000133600000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................23149.00493900001000000
...................................................................................................................................................ACTGAGATCGATTGGTGCAG..........................................................................................................................................................20144.0044430000100000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC.....................................................................................23143.0043200063500000
...................................................................................................................................................ACTGAGATCGATTGGTGCATTT........................................................................................................................................................22141.0041380000300000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG.....................................................................................22139.00391700071500000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT......................................................................................21137.0037100092700000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAT........................................................................................................................................................22135.0035350000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT.....................................................................................22134.0034200072500000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA......................................................................................21124.0024000071700000
..................................................................................................................................................AACTGAGATCGATTGGTGCATT.........................................................................................................................................................22124.0024220000200000
...................................................................................................................................................ACTGAGATCGATTGGTGC............................................................................................................................................................18122.0022211000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAA........................................................................................................................................................22121.0021200001000000
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT....................................................................................21121.0021000061500000
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTG......................................................................................18121.0021300061200000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAC........................................................................................................................................................22120.0020180000200000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGAT......................................................................................................................................................23119.0019190000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCAC..........................................................................................................................................................21115.0015150000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGC.......................................................................................20115.0015100011300000
..................................................................................................................................................AACTGAGATCGATTGGTGCATA.........................................................................................................................................................22115.0015130001100000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGT.......................................................................................................................................................22114.0014140000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGG.......................................................................................................................................................24114.0014140000000000
.....................................................................................................................................................TGAGATCGATTGGTGCATAGAT......................................................................................................................................................22113.001380002300000
....................................................................................................................................................CTGAGATCGATTGGTGCATAG........................................................................................................................................................21113.0013120000010000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGT.....................................................................................21113.0013000031000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTC...................................................................................24112.001200003900000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTC....................................................................................23111.001100002900000
...................................................................................................................................................ACTGAGATCGATTGGTGCG...........................................................................................................................................................19111.0011110000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................24110.0010100000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATTT........................................................................................................................................................23110.0010100000000000
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTGC.....................................................................................1919.00980000100000
droEre2
TCC--A--------------AGGGGT-----------GCA------GGATCG---GTA--------GCAGGAGCTACCTTCAGG-A-G-------------------------------CTGCA---CTCCCACTTCGAGTCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGAAG--CCCCACTC---------AA-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGGAGTGTC-------------A-AATCGGAGCGAACTTCA-AATGTG-------CTGTTGAATASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................211128238.00128238142139040911241000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................22195673.00956733006126462127825920
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................23161190.0061190951109317198499580
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT.....................................................................................22110972.00109721512702013381210
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGT.......................................................................................2019179.00917980108319479930
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................2314750.004750220339013542540
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA.....................................................................................2212323.002323503580819520
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA....................................................................................2312272.002272303230019460
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC....................................................................................2311803.001803812550115380
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAG........................................................................................1911617.001617301860614220
...................................................................................................................................................ACTGAGATCGATTGGTGCATAG........................................................................................................................................................221909.0090960540498000
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTG......................................................................................181552.00552005025450
...................................................................................................................................................ACTGAGATCGATTGGTGCAT..........................................................................................................................................................201360.003600080163360
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG....................................................................................231291.00291004002870
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT......................................................................................212247.504950016004790
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG......................................................................................221240.00240006002340
...................................................................................................................................................ACTGAGATCGATTGGTGCATA.........................................................................................................................................................211240.002401050112230
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC.....................................................................................231236.002362037001970
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA....................................................................................231209.002090030031760
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA......................................................................................211196.001961014001810
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTG......................................................................................201153.001531005001380
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC.....................................................................................211134.0013420013001010
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC......................................................................................211114.00114003001110
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT...................................................................................24196.0096002100750
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT....................................................................................24191.0091001100800
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTGC.....................................................................................19187.008700200850
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................24181.008100004770
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................23174.007400400700
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT....................................................................................22169.0069301500510
....................................................................................................................................................CTGAGATCGATTGGTGCATAGA.......................................................................................................................................................22160.006040301520
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA....................................................................................23157.0057001100460
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTG......................................................................................19151.005100000510
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG.....................................................................................22150.005000311450
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTC....................................................................................23147.004700500420
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCCA...................................................................................24147.004700900380
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................23147.004700300440
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGC.....................................................................................18147.004700100460
.....................................................................................................................................................TGAGATCGATTGGTGCATAGA.......................................................................................................................................................21136.003600303300
......................................................................................................................................................................................................................TAGCACCATTCGAAATCA.........................................................................................18233.006600100650
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGG.......................................................................................................................................................23132.003200000320
.....................................................................................................................................................TGAGATCGATTGGTGCATAGAT......................................................................................................................................................22132.003200103280
...................................................................................................................................................ACTGAGATCGATTGGTGCA...........................................................................................................................................................19128.002800101260
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGC.....................................................................................20124.002410200210
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGA.......................................................................................20121.002100500160
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCAA...................................................................................24120.002000100190
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................24119.001900301150
.....................................................................................................................................................TGAGATCGATTGGTGCATAG........................................................................................................................................................20118.001800100170
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGCT....................................................................................19117.001700000170
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGT.......................................................................................21117.001700000170
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGC.......................................................................................20116.001600100150
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTG....................................................................................23116.001600100150
..................................................................................................................................................AACTGAGATCGATTGGTGCAT..........................................................................................................................................................21116.001600300130
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTGCT....................................................................................20114.001400300110
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGT.....................................................................................23113.001300100120
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTA...................................................................................24112.001200100110
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAC....................................................................................23112.001200200100
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT....................................................................................21112.00120050070
droSec2
TGC--A--------------AAGGGT-----------TCA------GGATCG---GAA--------ACAGGAGCTACC-------A-A----------------C--------------TTGCC---CATCCACTTCAAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAAA--ACCCACTC---------AA-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC-------------A-AATCGAAGCGAACTTCA-AATGTG-------CTGTTAAATASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................21136390.003639058264836258
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................23130965.003096562663730800
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................22114280.001428093332914125
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGT.......................................................................................2017051.00705174586991
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT.....................................................................................2213508.003508122523469
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAG........................................................................................1912366.0023661232360
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA.....................................................................................2212154.0021541012152
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................2311575.00157545281511
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA....................................................................................231437.00437100436
...................................................................................................................................................ACTGAGATCGATTGGTGCAT..........................................................................................................................................................201358.00358150352
...................................................................................................................................................ACTGAGATCGATTGGTGCATAG........................................................................................................................................................221256.00256350248
..................................................................................................................................................AACTGAGATCGATTGGTGCAT..........................................................................................................................................................211191.00191050186
......................................................................................................................................................................................................................TAGCACCATTCGAAATCA.........................................................................................181148.00148000148
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT......................................................................................211135.00135020133
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTG......................................................................................181131.00131000131
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA......................................................................................211115.00115000115
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGA.......................................................................................201115.00115000115
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA....................................................................................231109.00109000109
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA....................................................................................231109.00109000109
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT...................................................................................24186.008610085
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................24185.008501084
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC....................................................................................23180.008010079
...................................................................................................................................................ACTGAGATCGATTGGTGCATA.........................................................................................................................................................21171.007110169
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG......................................................................................22168.006800068
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG.....................................................................................22149.004900049
..................................................................................................................................................AACTGAGATCGATTGGTGCATAG........................................................................................................................................................23145.004500045
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT....................................................................................24144.004400044
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTG......................................................................................20140.004040036
...................................................................................................................................................ACTGAGATCGATTGGTGCA...........................................................................................................................................................19140.004000040
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................24136.003601035
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAA........................................................................................19133.003300033
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT....................................................................................22133.003340029
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC......................................................................................21133.003300033
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT.....................................................................................22127.002711025
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC.....................................................................................23126.002620024
.....................................................................................................................................................TGAGATCGATTGGTGCATAGA.......................................................................................................................................................21124.002421021
....................................................................................................................................................CTGAGATCGATTGGTGCATAGA.......................................................................................................................................................22122.002211020
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................23121.002100021
.....................................................................................................................................................TGAGATCGATTGGTGCATAGAT......................................................................................................................................................22120.002000020
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC.....................................................................................21118.001850013
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGC.......................................................................................20118.001800018
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTAA.....................................................................................22116.001600016
....................................................................................................................................................CTGAGATCGATTGGTGCATAG........................................................................................................................................................21115.001500015
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTGC.....................................................................................19113.001300013
.....................................................................................................................................................TGAGATCGATTGGTGCATAG........................................................................................................................................................20113.001300013
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAG........................................................................................20113.001300013
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT....................................................................................21112.001200012
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGT.......................................................................................21111.001100011
..................................................................................................................................................AACTGAGATCGATTGGTGCATA.........................................................................................................................................................22110.001000010
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTG......................................................................................19110.001000010
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------AA-TT.................................................................................................................2219.0090009
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAT........................................................................................1918.0080008
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTA.....................................................................................2218.0080008
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAT......................................................................................................................................................2418.0080107
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGA.....................................................................................2317.0070007
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAAA...................................................................................2417.0070007
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGT.......................................................................................1917.0071006
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTGCT....................................................................................2017.0071006
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG....................................................................................2317.0071006
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGT.....................................................................................2317.0070007
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------AA-T..................................................................................................................2116.0060006
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTTT..................................................................................2516.0061005
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGGA....................................................................................2315.0050005
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGAA......................................................................................2115.0050005
..................................................................................................................................................AACTGAGATCGATTGGTGCA...........................................................................................................................................................2015.0050005
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTA...................................................................................2415.0050005
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------AA-TTCA...............................................................................................................2415.0050005
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------AA-TTCAACT............................................................................................................2715.0051004
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGCT....................................................................................1915.0050005
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGA.....................................................................................2114.0040004
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAC........................................................................................1914.0040004
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGC.....................................................................................1814.0040004
.....................................................................................................................................................TGAGATCGATTGGTGCAT..........................................................................................................................................................1814.0040004
..................................................................................................................................................AACTGAGATCGATTGGTGCAA..........................................................................................................................................................2114.0040004
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGC.....................................................................................2014.0040004
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTC...................................................................................2414.0040004
....................................................................................................................................................CTGAGATCGATTGGTGCATA.........................................................................................................................................................2013.0030003
droSim2
TCC--A--------------AAGGGT-----------TCA------GGATCG---GAA--------ACAGGAGCTACC-------A-G----------------C--------------TTGCC---CAGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAAA--ACCCACTC---------AA-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC-------------A-AATCAAAGCGAACTTCA-AATGTG-------CTGTTAAATASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................23150607.0050607500721691630618833000201000
...................................................................................................................................................ACTGAGATCGATTGGTGCAT..........................................................................................................................................................20110325.0010325101981819038600000000010
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................2219544.00954419282714164742210002400000
..................................................................................................................................................AACTGAGATCGATTGGTGCAT..........................................................................................................................................................2117092.00709270082216014500000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................2116995.0069951147141288574000000300000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAG........................................................................................................................................................2215884.005884554318200529500000000003
......................................................................................................................................................................................................................TAGCACCATTCGAAATCA.........................................................................................1815734.0057347000118560900000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGG.......................................................................................................................................................2315087.0050875044142900000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAG........................................................................................1915072.00507274001107489000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGT.......................................................................................2013730.0037307500166358700000100000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................2412100.002100206865012000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATA.........................................................................................................................................................2111971.0019711861410039000000000102
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................2311239.001239207011218980000018201000
...................................................................................................................................................ACTGAGATCGATTGGTGCA...........................................................................................................................................................1911066.001066866320319100001000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAG........................................................................................................................................................2311034.00103496027026201000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................231817.008178133100000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................241746.007467450100000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCAC..........................................................................................................................................................201554.005545513000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................231498.004984971000000000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGA.......................................................................................................................................................221467.004674581100700000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCAC..........................................................................................................................................................211370.003703700000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATA.........................................................................................................................................................221361.0036133624001900000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATT.........................................................................................................................................................211352.003523520000000000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATAG........................................................................................................................................................211345.0034528651015200000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATT.........................................................................................................................................................221322.003223210100000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGG.......................................................................................................................................................241203.002032021000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCA...........................................................................................................................................................201188.0018816500012200000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAT......................................................................................................................................................241156.001561530000300000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAA........................................................................................................................................................221142.001421420000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGC............................................................................................................................................................181136.001367100026300000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATTT........................................................................................................................................................231109.001091090000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCAG..........................................................................................................................................................20195.0095950000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................24186.0086860000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAT........................................................................................................................................................22184.0084840000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCAG..........................................................................................................................................................21169.0069690000000000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGG.......................................................................................................................................................22155.0055550000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAT........................................................................................................................................................23155.0055550000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGC............................................................................................................................................................19152.0052443001400000000000
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTGCT....................................................................................20152.0052491000200000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATTT........................................................................................................................................................22149.0049490000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA.....................................................................................22143.0043410020000000000000
....................................................................................................................................................CTGAGATCGATTGGTGCAT..........................................................................................................................................................19142.0042370000500000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGT.......................................................................................................................................................22141.0041410000000000000000
....................................................................................................................................................CTGAGATCGATTGGTGCA...........................................................................................................................................................18140.00402800001200000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC.....................................................................................21139.0039200223300000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCAA..........................................................................................................................................................20139.0039380100000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................25137.0037370000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAA........................................................................................................................................................23136.0036351000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCG...........................................................................................................................................................19135.0035340100000000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAG........................................................................................18134.0034000003400000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCAA..........................................................................................................................................................21132.0032320000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT.....................................................................................22131.0031290020000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT...................................................................................24130.0030000032700000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG.....................................................................................22129.0029290000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGT............................................................................................................................................................18128.0028280000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC....................................................................................23127.0027270000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................24125.0025250000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTG.............................................................................................................................................................18124.0024200002200000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTG......................................................................................20122.0022100002100000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAC........................................................................................................................................................22122.0022220000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATTTT.......................................................................................................................................................24121.0021210000000000000000
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTG......................................................................................18121.0021210000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGATA.....................................................................................................................................................25120.0020180000200000000000
.....................................................................................................................................................TGAGATCGATTGGTGCATAGA.......................................................................................................................................................21120.0020170000300000000000
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------AA-TTCAACTC...........................................................................................................28120.0020180100100000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGAT......................................................................................................................................................25120.0020190100000000000000
.....................................................................................................................................................TGAGATCGATTGGTGCAT..........................................................................................................................................................18119.0019170000200000000000
.....................................................................................................................................................TGAGATCGATTGGTGCATAGAT......................................................................................................................................................22119.0019130000600000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGAT......................................................................................................................................................23118.0018170000100000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATA.........................................................................................................................................................20118.0018100000800000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAC......................................................................................................................................................24117.0017170000000000000000
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGC.....................................................................................18116.0016150000000001000000
...........................................................................................................................................................................................................................CCATTCGAAATCAGTGCT....................................................................................18116.0016150100000000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGT.......................................................................................19115.0015000021300000000000
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTGC.....................................................................................19113.0013120000100000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAAT.....................................................................................................................................................25113.0013130000000000000000
.....................................................................................................................................................TGAGATCGATTGGTGCATAG........................................................................................................................................................20112.001270300200000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATT.........................................................................................................................................................20112.0012120000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAC....................................................................................23111.0011110000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATC.........................................................................................................................................................22110.0010100000000000000000
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGCT....................................................................................1919.00960000300000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGG.......................................................................................2019.00990000000000000000
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------AA-TTCAACT............................................................................................................2719.00990000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGATAT----................................................................................................................................................2618.00880000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATC.........................................................................................................................................................2118.00880000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGATAT----C...............................................................................................................................................2717.00770000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGC.......................................................................................2017.00770000000000000000
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTGCC....................................................................................2017.00770000000000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT....................................................................................2217.00700001600000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATG.........................................................................................................................................................2116.00660000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGT............................................................................................................................................................1916.00660000000000000000
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------AA-...................................................................................................................2016.00600000600000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAC........................................................................................................................................................2316.00660000000000000000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC.....................................................................................2316.00660000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATATT.......................................................................................................................................................2316.00660000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAG......................................................................................................................................................2416.00660000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG....................................................................................2316.00660000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAAC.....................................................................................................................................................2515.00550000000000000000
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------......................................................................................................................1815.00530000200000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAAG.....................................................................................................................................................2515.00550000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGG............................................................................................................................................................1915.00550000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGA............................................................................................................................................................1915.00550000000000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGC.......................................................................................................................................................2215.00550000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGATT.....................................................................................................................................................2514.00440000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA......................................................................................2114.00440000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGTA......................................................................................................................................................2414.00440000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAA........................................................................................1914.00440000000000000000
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------AA-T..................................................................................................................2114.00400000400000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATTTT.......................................................................................................................................................2323.50770000000000000000
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------AA-TTCA...............................................................................................................2413.00310000200000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGTA......................................................................................................................................................2513.00330000000000000000
........................................................................................................................................................................................................................GCACCATTCGAAATCAGT.......................................................................................1813.00310000200000000000
...........................................................................................................................................................................................................................CCATTCGAAATCAGTGCC....................................................................................1813.00330000000000000000
..........................................................................................................................................................................TAT----CAGGAAA--ACCCACTC---------AA-TTC................................................................................................................2313.00310000200000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCT...........................................................................................................................................................2013.00330000000000000000
.....................................................................................................................................................TGAGATCGATTGGTGCATA.........................................................................................................................................................1913.00310000200000000000
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT....................................................................................2113.00310000200000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCAAT.........................................................................................................................................................2113.00330000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA....................................................................................2313.00330000000000000000
dm3
TCC--A--------------AAGGGT-----------TCA------GGATCG---GAA--------ACAGGAGCTACC-------T-A----------------C--------------TTGCC---CTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAGA--ACCCACTC---------AA-TTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC-------------A-AATCGAAGCGAACTTCA-AATGTG-------CTGTTAAATASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................231176657.001766570000199311002230602626013915600000081929863162315710400000000001000000000002041631800000000000000000353726233964540462002190171223621525166412402309116826266096511222498099547991889142024611115021730071839945521000000000000000010001000000000000001317901684010161299853456953339349361110415500000262101000003020000002100000000012213000000000000010021023342861140068952014349000001181000001000110000000000001000112650290666590970030360116011301818062262200002100000000003194403116101000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................22190304.0090304000079330000118012381452715216000000407588308334425611621000000001000000000000068750453000000000000000002018251112270031000135620574472485415820568814311610122121400002497626103279346507309128223660651093625000000000000000000001000000000000030240435410206312481144229683483657101240211033849441005004117110000000100000000000000000015001310011000010000101013307860097412169240300000101700000000000000000000000000073287385331993937132431100202002070112790000000000000010287631111200010
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................21187090.0087090000014620000000039189251685000000110212211856231119564242100000000000000000000018514270000000000000000000202412010000000483311349510004422853001710340100712191311355019114948613395456083540000000000000000000000000000000000201334144407224982388842212945246923811558359141380000025970000000000000000000000000000001001000000000000010017839351040120187712789131229000114322000000000000000000000000000164988542258327419201527920000014901216000000000000000003769741110000020
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT.....................................................................................22139050.00390500000590000000009240113000000700000000000000000000000000000000000000000000000000000010820000000203493029039101510811007000301008115721706742169732957588391156610000000000000000010000000000000100000159319000142325192461256110122731139534719199400100784200000000100000000000000000001000000000000011001003580027000994360490000033000000000000000000000000001010227827542374329524833582010001782055352300000010000001009505751201200010
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGT.......................................................................................20129839.0029839000026000000000220552000000703720811342338337390000000000000000000000115000000000000000000000088000000001112430172760001862100201020010663275051707929634196121447236000000000000000000000000000000000000533902032877462104511424632386442495878150000647000000000000000000000000000000000000000000000000003870228000667910500000119700000000000000000000000000011234620802355347910162128000010734058738300002000000000004589954100000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................23112128.0012128000017000002000000060000000053139010801000000000000000000000031200000000000000000000003430000000143731102692610192246110040000000000881611102712822130715000000000010000000000000000000000000249261017475221191310061724621925010006200000000000000000000000000001400100010000001100130239440006810814600000658000000000000000000000000000310299606781048726203262503001820237261000011010100000032262859464136100000
...................................................................................................................................................ACTGAGATCGATTGGTGCAT..........................................................................................................................................................2015796.00579600005000000000000010000001010415433810000000000000000000000035000000000000000000000013000000000015009313000013500000000000001203010537091814000000000001000000000000000000000000134166059121123451648580696790000095000000000000000000000000000000000000000000000000007852000319107000003060000000000000000000000000001400343358558002724100000107019014300000010010000000180402123300000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA.....................................................................................2215751.005751000049100000000110000000000000000000000000000000000000000000000000000000000000000200000000002700300000001000001000000000183330190331946579101867100000000000000000000000000000000000023532301855475218162038275492561900000199000000000000000000000000000001000000000000082000006141101011299015000004300000000000000000000000000023823225127530011710000045017170000100000000000028301200000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAG........................................................................................................................................................2215588.00558800001300000100011045000000016102135450100000000000000000000001711100000000000000000000032000000004160509620109134101001000000000040811081806012000000000000000000000000000000000000130164010114816492341109625017198000003600000000000000000000000000000000100010000000000000736000014450130000064000000000000000000000000000535346728149900250150130000670898700000000000000003104827021100000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAG........................................................................................1914446.0044460000000000000050000000000004112686731200000000000000000000002910000000000000000000004000000000016002700000036000000000100016341108340571115387000000000000000000000000000000000000147327069106499126941120059111300000014500000000000000000000000000000000000000000000000000613120005185070000014000000000000000000000000000234422837970000570000005401390000000000000000028101010000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA....................................................................................2313888.0038880000900000000007001600000000000000000000000000000000000000000000000000000000000006500000000202242026813001510662005505300009274903161507512956300000000000000000000000000000000000020924901210056811711139114310000015100000000000000000000000000000000000000000003100000533000083502000001100000000000000000000000000006912810112600210000003023000000000000000001500000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATA.........................................................................................................................................................2112249.0022490000500000000000001000000001617598143100000000000000000000001000000000000000000002008000000001017305810001396100100000000031224080352213023000000000010000000000000000000000000532603741193156782136116473900000800000000000000000000000000000000000000000000000000560000716030000068000000000000000000000000000018118715321410443611000010024330000000000010000030297000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT...................................................................................2412041.00204100004100000000080041000000200201620100000000000000000000000403180000000000000000000005720000000001690060335000666402011031100004081000100012111900000000000000000000000000000000000016180120022211162241275000004000000000000000000000000000000000000000000000000000080000011010000020000000000000000000000000000111117170010000000201000000000000000000600000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCAT..........................................................................................................................................................2111779.001779000020000000000000000000030000000000000000000000000000000220000000000000000000001000000000051022000000760000000000000062000116030120000000000000000000000000000000000004443021009120150190320000002200000000000000000000000000000000000000000000000000240100010230300000130000000000000000000000000000012613910512900234000000540103700000000000000000046220000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC....................................................................................2311279.00127900004700000001080012000000000000000000000000000000000000000000000000000000000221026001000000012120112310020420000000011001101720000220242218000000000000000000000000000000000000242601300102952112363800000031000000000000000000000000000000000000000000000000002170000110030000020000000000010000000000000000294531570032000000802000000000000000000500000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAATC----................................................................................................................................................2611100.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764336000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT....................................................................................211898.008980000000000000000003300000000000000000000000000000000000000000000000000000000000002000000000208400122020040592000000000000000000000001001000000000000000000000000000000000000210400160201000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042370000000000000000000000000000000100000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA....................................................................................231772.0077200007000000000100000000000000000000000000000000000000000000000000000000000000000600000000001300800000020000000000000008503053190502114000000000000000000000000000000000000283603201627319027111810000012000000000000000000000000000000000000000000000000000230000313000000016000000000000000000000000000146335271001030000001508130000000000000000010600000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTA...................................................................................241632.0063200008000000000000000000000000000000000000000000000000000000000000000000000000000190000000001500114000001023500020000010130000000000304400000000000000000000000000000000000013110200438037190300000027000000000000000000000000000000000000000000022000000100000200000001000000000000000000000000000011130000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC.....................................................................................211603.00603000010000000000300000000000210000000000000000000000000000100000000000000000000004000000000030010000012100000000000000580608713021110000000000000000000000000000000000004655033421857541151249560000042000000000000000000000000000000000000000000000000000400000202000001000000000000000000000000000058450001000000000000000000000000000100000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT....................................................................................221568.005680000200000000000000000000000005046100000000000000000000000000000000000000000000000300000000102001500001070000000100000005000000003013000000000000000000000000000000000000422702000145005302503300000039000000000000000000000000000000000000000000000000000600002101000002000000000000000000000000000061210150010000000002000000000000000000300000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCA.........................................................................................181534.005340000000000000000000000000004202915620000000000000000000000010000000000000000000000200000000002007000000600000000000000710000000133117170000000000000000000000000000000000003690944817292041324100000130000000000000000000000000000000000000000000000000015000002000000000000000000000000000000000000111347370001010000300100000000000000000500000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAG........................................................................................................................................................231517.005170000300000000000000000000000000000000000000000000000000071000000000000000000000000000000010100130000001800000000000000300001010000100000000000000000000000000000000000097019002301050153000002000000000000000000000000000000000000000000000000000500002202000007000000000000000000000000000033833159003422000000401012000000000000000009500000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................241505.0050500001000000000000000000000000000000000000000000000000000100000000000000000000000000000000001102000000110000000000000041010102000010000000000000000000000000000000000004120110032050901320000030000000000000000000000000000000000000000000000000007000015020000090000000000000000000000000000404633680037110000002010110000000000000000212900100000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT......................................................................................211475.004750000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000100400000000000000000000061000211018019140000000000000000000000000000000000001319061029112311370000007000000000000000000000000000000000000000000000000002500009790500000700000000000000000000000000004423193900000000001010000000000000000007800000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG.....................................................................................221450.004500000000000000001000000000000000000000000000000000000000000000000000000000000000024000000000044000000000150000000000000151040006020750000000000000000000000000000000000001218061121407047956200000800000000000000000000000000000000000000000000000000140000213000000010000000000000000000000000000292824800350000007013000000000000000002300000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGATC.....................................................................................................................................................251418.004180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282136000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTG......................................................................................201392.00392000020000000000000200000000321219292000000000000000000000000000000000000000000000001000000000010030000008000000000000011103011400000000000000000000000000000000000000000122208737341322316163310000025000000000000000000000000000000000000000000000000000300005901000008000000000000000000000000000041112110010000000000000000000000000000900000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCA...........................................................................................................................................................191323.00323000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000030000002000000000000000000030002000000000000000000000000000000000000000115503000223039530000000000000000000000000000000000000000000000000000000012100041201000003500000000000000000000000000001111122100311000003073000000000000000008610000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA......................................................................................211313.0031300008000000000500000000000000000000000000000000000000000000000000000000000000000100000000003004000000110000001000000020010112040320000000000000000000000000000000000008300514310351112300000019000000000000000000000000000000000000000000000000000700004170200000100000000000000000000000000001719203600010000003021000000000000000002900000000000
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTG......................................................................................181282.002820000000000000000001000000002100000000000000000000000000000000000000000000000000000000000000000300000017000000000000001100010100011000000000000000000000000000000000000715054223119301308000000130000000000000000000000000000000000000000000000000017000024010000080000000000000000000000000000191518310000000000000000000000000000000600000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................241259.0025900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002000001260000000000000032000001000000000000000000000000000000000000000009700000205131200000000000000000000000000000000000000000000000000000000001100024000000019000000000000000000000000000015171815001180000003032000000000001000016712000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG....................................................................................231257.00257000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000030014000000450000000001101100000000040210000000000000000000000000000000000001350700313010161201000009000000000000000000000000000000000000000000000000000000001300000001000000000000000000000000000022223320000000000000200000000000000000200000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGG.......................................................................................201254.0025400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000200000100018200000000000000000000000000000000000061102007702345142670000021000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000019222900010000000604200000000000000000200000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATAG........................................................................................................................................................211246.002460000100000000000001000000001000000000000000000000000000040000000000000000000000060000000010500140000004000000000000000000000000001000000000000000000000000000000000000012103510170174000000000000000000000000000000000000000000000000000000000000100000101000000000000000000000000000000000015910700300000000020000000000000000003600000000000
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGC.....................................................................................201245.002450000000000000000003000000000000000000000000000000000000010000000000000000000000070000000010150031200010158000000000000000000000001010000000000000000000000000000000000000230100160203030000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGT.....................................................................................211237.002370000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000020000000000000040010312010020000000000000000000000000000000000002126015003180150216520000009000000000000000000000000000000000000000000000000000000001100000004000000000000000000000000000051350010000000002000000000000000000800000000000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG......................................................................................221234.00234000000000000000000000000000219171101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202022131018111000000030000000000000000000000000000000000000000000000000004100093305000001900000000000000000000000000001379240000000000000000000000000000001900000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGA.......................................................................................................................................................221226.002260000100000000000000000000002017121000000000000000000000000000000000000000000000001000000000050050100001200000000000000100003000101100000000000000000000000000000000000011507331217104723000002000000000000000000000000000000000000000000010000000000002000000001100000000000000000000000000004810700820000004063000000000000000003311101000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA....................................................................................231212.002120000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000013000000000000004101000001083000000000000000000000000000000000000151804000731009080000004000000000000000000000000000000000000000000001000000300001110000000100000000000000000000000000001113102300000000001011000000000000000002300000000000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC.....................................................................................231200.00200000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000001000000000000001000001301010000000000000000000000000000000000000101206111028019061140000001600000000000000000000000000000000000000000000000000060000390400000100000000000000000000000000007128130000000000100000000000000000000200000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................231199.0019900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006006000000400000000000000000000000000000000000000000000000000000000000000041010001120020400000050000000000000000000000000000000000000000000000000003100012010000060000000000000000000000000000111351700530000002044000000000000000007401000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT.....................................................................................222167.50335000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000030000007000000000000006101024701113117000000000000000000000000000000000000232001502210713161213000000500000000000000000000000000000000000000000000000000160000050000000200000000000000000000000000001920122200330000003030000000000000000001400000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGT.......................................................................................191149.001490000000000000000000000000001234710000000000000000000000000000000000000000000000000000000000000000000030000000000000010000400001000000000000000000000000000000000000001212061147362115130000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000055550000000000001100000000000000000800000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATA.........................................................................................................................................................221145.0014500000000000000000000000000000110100000000000000000000000100000000000000000000000000000000000000000000800000000000000120000260100100000000000000000000000000000000000012011000110202400000000000000000000000000000000000000000000000000000000020000010100000800000000000000000000000000007188700620000001058000000000000000003100000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAT......................................................................................................................................................241139.0013900000000000000000000000000008000000000000000000000000000210000000000000000000000000000000000000000000000000000000000300000020000000000000000000000000000000000000000002000011218232500000300000000000000000000000000000000000000000001300000010000000000000300000000000000000000000000006761100100000001012000000000000000005000000000000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT....................................................................................241135.001350000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000006400004211160003000000700000000000000000000000000000000000000000000000000150000210200000200000000000000000000000000008191690000000000203000000000000000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC......................................................................................211122.00122000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000021102001000000000000000000000000000000000000260300221100011000002100000000000000000000000000000000000000000000000000071000319030000030000000000000000000000000001854110000000000000000000000000000000600000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCAA...................................................................................241119.00119000010000000000000000000000000000000000000000000000000000000000000000000000000002000000000012003100000037000000000000200000000002022000000000000000000000000000000000000340500010004020000001000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000001120000000000000000000000000000000100000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGC.......................................................................................201117.001170000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000011000000000000000000000000000000000000008100200011002250000001400000000000000000000000000000000000000000000000000020000010000000000000000000000000000000000007911190010000000802000000000000000000700000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGA.......................................................................................20199.009900001000000000000000000000000000000000000000000000000000000000000000000000000000300000000008000000000200000000000000100000000000000000000000000000000000000000000000046020013001126100000400000000000000000000000000000000000000000000000000010000050000000000000000000000000000000000005214500000000000001000000000000000002000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTC....................................................................................23196.00960000200000000061010000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000022030001021400000000000000000000000000000000000004002000102030110000010000000000000000000000000000000000000000000000000002000021000000030000000000000000000000000000656100023000000103000000000000000000700000000000
.....................................................................................................................................................TGAGATCGATTGGTGCATAGA.......................................................................................................................................................21195.0095000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000010000003000000000000001000000200004000000000000000000000000000000000000020000000101040000000000000000000000000000000000000000000000000000000000200001000000001400000000000000000000000000005135300100000002063000000000000000001602100000000
..................................................................................................................................................AACTGAGATCGATTGGTGCA...........................................................................................................................................................20186.008600001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000054000010000000000000300000000000000000000000000000000000000000000000000010000030000000800000000000000000000000000004458000000000030104000000000000000002100000000000
droEug1
TCC--A--------------AAGGGT-----------GCA------GGATCG---GAC------------------------------------------------------------------------TCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAA--ACATACTC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGCC-------------TTAATCGAAGTGATTTTTA-AGTGAA-------ACTTTAAATASizeHit CountTotal NormTotal
No Reads
droBia1
TCC--A--------------AAGGGT-----------GCA------GGATCG---CAG--------TGGGGAGCA-C----------------------------------------------T---CTTCCCCTTCGAATCGAAGAACTGAGATCGACTGGTGCATAGATAT----CAGGGAA--AGCCACCC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAGCAATCAGCAGAGTGTC-------------TCGCTCGGAGTGAATTTCA-ACGCTGCCCCGCCTCTCCAACGASizeHit CountTotal NormTotal
No Reads
droTak1
TCC--A--------------AAGGGT-----------GCA------GGATCG---AAA--------TCTGGAGCA-C--------T-G----------------C--------------TCGC----------CTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAAA-ACCCACTC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGTC-------------TCAATCGAAGTGAACTCCA-GAAGTG-------TCTTCGGCGASizeHit CountTotal NormTotal
No Reads
droEle1
TTC--A--------------AAAGTG-----------GCA------GGATCG---GAAAA------AAAGGAGCT-------------------------------------------------------CTTCTTCGAATCGAAGAACTGAGCTCGATTGGTGCATAGATAT----CAAGGGA--ACCCGCTC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGTC-------------TTAATCGAAGTGAATTTTT-ACTGTG-------CCTCTAAAGASizeHit CountTotal NormTotal
No Reads
droRho1
TCC--A--------------AAAGTG-----------GCA------GGATCG---AAA--------TCAGGAGCT-CC-------A-T----------------C---------------CACCC--AGCACACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGGA--ACCCGCTC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGCC-------------TTAATCGAAGTGAATTTTA-AATGAG-------CCTTCGAATASizeHit CountTotal NormTotal
No Reads
droFic1
CCC--G--------------AAATCG-----------GCA------GGATGG---GTA--------TCAAGAATCAGG-------AAT----------------C---------------CACAC--AGAAGCCTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATAC--CAAGGAA--ACCCGCTC---------AT-TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGTC-------------GCAAGCAAAGCCAACTTCA-A----------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CG---------------------GCG-----------GCA------GGATCG---CA------------GGATT-----TGAGGGAGT----------------GC-------------ATACCG--AGGACAGTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAGACACCCGCTT---------AT--TTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCAATCAGCAGAGTGTC-------------G-AAAAAATACAAACATTA-ACTGTG--TGAACGTTTCAAGAASizeHit CountTotal NormTotal
No Reads
droAna3
CTT--G--------------AAGGCAACAGGATCATC--------------A---TTG--------ACAGGA----TT-------A-G----------------C--------------TAGCC---AGGATAATTCGAATCAAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAG--ATCCGATC---------AT-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACAGA---------TAAAGTGTTT----------------TG-TGTGTG-------TTTTTCAACASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................23154874.005487453111847731336029
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................21140769.004076912241161710738918
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................22131985.0031985103121674014224987
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................2317942.00794224004671587293
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT.....................................................................................2217399.007399130039573603069
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGT.......................................................................................2014767.004767111022193562180
...................................................................................................................................................ACTGAGATCGATTGGTGCAT..........................................................................................................................................................2011834.001834300100491682
...................................................................................................................................................ACTGAGATCGATTGGTGCATAG........................................................................................................................................................2211745.0017452100241671416
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA....................................................................................231859.008595002575592
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA.....................................................................................221742.007422002924444
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAG........................................................................................191620.006203003060311
...................................................................................................................................................ACTGAGATCGATTGGTGCATA.........................................................................................................................................................211562.005622003814508
..................................................................................................................................................AACTGAGATCGATTGGTGCAT..........................................................................................................................................................211524.005241003214477
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT......................................................................................211458.00458100491407
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................241301.003010001813270
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA......................................................................................211269.00269000192248
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................231224.00224000177200
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT...................................................................................241195.00195000601134
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................241186.0018600080178
...................................................................................................................................................ACTGAGATCGATTGGTGCA...........................................................................................................................................................191175.0017500076162
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTG......................................................................................181168.00168000100158
..................................................................................................................................................AACTGAGATCGATTGGTGCATAG........................................................................................................................................................231158.00158000232133
..........................................................................................................................................................................TAT----CAAGGAG--ATCCGATC---------AT-TTC................................................................................................................231149.00149000203126
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC......................................................................................211115.0011500021112
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA....................................................................................231115.0011500038374
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC....................................................................................23197.009720047147
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG....................................................................................23162.006200026036
....................................................................................................................................................CTGAGATCGATTGGTGCATAGA.......................................................................................................................................................22153.00531002347
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC.....................................................................................21152.00528006038
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT....................................................................................22151.005130017031
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTG......................................................................................20151.005118003030
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAT......................................................................................................................................................24146.00460002044
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC.....................................................................................23143.004300016027
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT.....................................................................................22141.004100012326
..........................................................................................................................................................................TAT----CAAGGAG--ATCCGATC---------AT-TT.................................................................................................................22139.003910023114
..................................................................................................................................................AACTGAGATCGATTGGTGCATA.........................................................................................................................................................22139.00390003036
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG.....................................................................................22139.003910019118
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGC.......................................................................................20138.00380003134
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTCT.....................................................................................22132.00320009419
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG......................................................................................22132.00320003029
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT....................................................................................24132.003200019013
...................................................................................................................................................ACTGAGATCGATTGGTGCATAT........................................................................................................................................................22131.00310002029
..........................................................................................................................................................................TAT----CAAGGAG--ATCCGATC---------AT-TTCA...............................................................................................................24129.002900014015
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA....................................................................................23126.00260007118
...................................................................................................................................................ACTGAGATCGATTGGTGCATAA........................................................................................................................................................22123.00230002021
..................................................................................................................................................AACTGAGATCGATTGGTGCA...........................................................................................................................................................20123.00230002120
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT....................................................................................21122.00221008112
.....................................................................................................................................................TGAGATCGATTGGTGCATAGAT......................................................................................................................................................22121.00210003117
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTGC.....................................................................................19121.00210000021
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTAT.....................................................................................22121.00210002415
.....................................................................................................................................................TGAGATCGATTGGTGCATAGA.......................................................................................................................................................21120.00200004016
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTTT..................................................................................25120.00200002018
....................................................................................................................................................CTGAGATCGATTGGTGCATAG........................................................................................................................................................21120.00201003511
......................................................................................................................................................................................................................TAGCACCATTCGAAATCA.........................................................................................18119.00190001801
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................24119.00190002215
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGA.......................................................................................20118.00180001206
..........................................................................................................................................................................TAT----CAAGGAG--ATCCGATC---------AT-TTCAAT.............................................................................................................26117.00170003014
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGC.....................................................................................18114.00141002011
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGC.....................................................................................20113.00130003010
..........................................................................................................................................................................TAT----CAAGGAG--ATCCGATC---------AT-T..................................................................................................................21113.00130003010
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................23112.0012000606
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................25111.00110000011
droBip1
AGATTG--------------GAACTACCAGGACCTAC--------------A---CTG--------ACAGGA----TT-------A-G----------------C--------------TAGCC---AGGATAATTCGAATCAAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAG--ATCCGATC---------AT-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACCAA---------TAAAGTGTTC----------------TG-TGTGTG-------TTTTTCTACASizeHit CountTotal NormTotal
No Reads
dp5
GAG--A--------------CCAGGA-----------GCA------GCCGAG----CA--------GCAGGA-CA--C-------T-T----------------C--------------TTACA---ATTACAGTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGAGG--ACTCGCTA---------ATTTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGA-----------AAGTGTTT-CTCCAAAGTGATTTTTTTTCAGTG-------C---ATGACASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................22144452.0044452227493180511233523201
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................23128104.002810402481290832487565301
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................2118562.0085620146165440185417000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT.....................................................................................2213759.003759019010280268032000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGT.......................................................................................2011579.00157901404760106425000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................2311004.00100418551237242442151209
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC.....................................................................................231994.009940009660280000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC....................................................................................231812.008120007700420000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA.....................................................................................221628.0062808024003800000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA....................................................................................231286.002860203802451000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG......................................................................................221266.00266000261050000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAG........................................................................................191164.00164070620941000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT....................................................................................241127.00127010920340000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAG........................................................................................................................................................221122.001221110230739005
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................241115.001152903305540111
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC.....................................................................................211100.001000240590170000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGC.......................................................................................201100.0010000193060000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT...................................................................................24181.0081030340440000
..................................................................................................................................................AACTGAGATCGATTGGTGCAT..........................................................................................................................................................21179.00793202903312000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAG........................................................................................................................................................23165.0065240100444001
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTG......................................................................................20159.0059014043020000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGT.....................................................................................23159.0059000490100000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT....................................................................................22153.0053012070331000
....................................................................................................................................................................................................................TCTAGCACCATTCGAAATCAGTGC.....................................................................................24150.005000049000100
...................................................................................................................................................ACTGAGATCGATTGGTGCAT..........................................................................................................................................................20148.0048430120225002
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT......................................................................................21139.0039000280110000
...................................................................................................................................................ACTGAGATCGATTGGTGCATA.........................................................................................................................................................21139.0039220120174002
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA......................................................................................21130.0030000160131000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCC....................................................................................24130.003000030000000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGT.......................................................................................21130.003001027020000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA....................................................................................23129.0029000190100000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA....................................................................................23127.0027000110160000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGA.......................................................................................................................................................22125.00250802065004
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC......................................................................................21119.001900017020000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG....................................................................................23119.001900020170000
..................................................................................................................................................AACTGAGATCGATTGGTGCATA.........................................................................................................................................................22117.00171007090000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................23116.00161208041000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGA.....................................................................................23115.001500014010000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAC....................................................................................23114.001400012020000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................24114.00140109021001
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT....................................................................................21113.001300000130000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTC....................................................................................23113.001300010030000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG.....................................................................................22112.001200010020000
....................................................................................................................................................................................................................TCTAGCACCATTCGAAATCAGTG......................................................................................23112.001200012000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGT.....................................................................................21112.00120104070000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTAA.....................................................................................22111.00110007040000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT.....................................................................................22110.00100009010000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTC...................................................................................24110.00100004060000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGC.......................................................................................2119.0090009000000
..........................................................................................................................................................................TAT----CAAGAGG--ACTCGCTA---------ATTTTCAACT............................................................................................................2818.0080005021000
..................................................................................................................................................AACTGAGATCGATTGGTGCA...........................................................................................................................................................2018.0080200060000
.....................................................................................................................................................TGAGATCGATTGGTGCATAGA.......................................................................................................................................................2118.0080301040000
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGC.....................................................................................2017.0070001060000
..........................................................................................................................................................................TAT----CAAGAGG--ACTCGCTA---------ATTTTCAACTC...........................................................................................................2916.0060006000000
..........................................................................................................................................................................TAT----CAAGAGG--ACTCGCTA---------ATTTTC................................................................................................................2415.0050002030000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................2515.0050103010000
..................................................................................................................................................AACTGAGATCGATTGGTGCAC..........................................................................................................................................................2115.0050005000000
droWil2
ATG--GGGATCCCTATGACATTAAGG-----------ACA------TAC---------------------------GG-------A------------------C---------------CACAT-ACAAATTGTTCGAATTAAAGAACTGAGATCGATTGGTGCATAGATAA----TATGCGA--ATTCTATCATTTGATTTCA-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATTAGAACCAATCAACAA--------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................211148218.00148218109531971147030
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................23193383.0093383779341824215324
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................22148615.004861542435138944265
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................23144221.00442212324509543840
...................................................................................................................................................ACTGAGATCGATTGGTGCATAG........................................................................................................................................................22110840.001084096341941192
...................................................................................................................................................ACTGAGATCGATTGGTGCAT..........................................................................................................................................................2019442.009442765001701775
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGG.......................................................................................................................................................2317101.007101708500016
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGT.......................................................................................2014435.00443562049114313
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT.....................................................................................2213470.0034702503673402
...................................................................................................................................................ACTGAGATCGATTGGTGCATA.........................................................................................................................................................2112633.0026332347022282
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................2312238.002238219600042
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................2311238.0012381086010151
...................................................................................................................................................ACTGAGATCGATTGGTGCA...........................................................................................................................................................1911221.001221114800073
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................2411161.001161881002278
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................241901.00901775000126
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAG........................................................................................191655.0065544007604
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA.....................................................................................221627.0062710012614
....................................................................................................................................................CTGAGATCGATTGGTGCATAGA.......................................................................................................................................................221580.00580313021264
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTG......................................................................................181464.0046413000451
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAT......................................................................................................................................................241409.0040935000158
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA....................................................................................231352.003520012349
.....................................................................................................................................................TGAGATCGATTGGTGCATAGAT......................................................................................................................................................221287.0028722000265
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA......................................................................................211279.002790000279
...................................................................................................................................................ACTGAGATCGATTGGTGCAC..........................................................................................................................................................201277.002772730004
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG......................................................................................221273.002730000273
..................................................................................................................................................AACTGAGATCGATTGGTGCAT..........................................................................................................................................................211272.0027221500156
.....................................................................................................................................................TGAGATCGATTGGTGCATAGA.......................................................................................................................................................211203.0020317000186
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTG......................................................................................201171.001710000171
..................................................................................................................................................AACTGAGATCGATTGGTGCATAG........................................................................................................................................................231165.0016515200013
...................................................................................................................................................ACTGAGATCGATTGGTGCATAA........................................................................................................................................................221136.0013612000016
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT......................................................................................211132.001320000132
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC.....................................................................................231128.0012819003106
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC......................................................................................211113.001130000113
....................................................................................................................................................CTGAGATCGATTGGTGCATAGAT......................................................................................................................................................231111.001118500026
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG.....................................................................................221107.001074800059
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC....................................................................................231102.001022100081
...................................................................................................................................................ACTGAGATCGATTGGTGCATT.........................................................................................................................................................21185.0085800005
...................................................................................................................................................ACTGAGATCGATTGGTGCATAT........................................................................................................................................................22183.0083780005
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGG.......................................................................................................................................................24178.0078780000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT....................................................................................22177.0077000077
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTGC.....................................................................................19177.0077400073
....................................................................................................................................................CTGAGATCGATTGGTGCATAG........................................................................................................................................................21173.00736300010
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA....................................................................................23166.0066300063
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC.....................................................................................21165.0065410060
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTG......................................................................................19161.0061000061
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT....................................................................................24158.0058000058
...................................................................................................................................................ACTGAGATCGATTGGTGCAG..........................................................................................................................................................20150.0050500000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT...................................................................................24143.0043000043
.....................................................................................................................................................TGAGATCGATTGGTGCATAG........................................................................................................................................................20143.00431300030
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGC.....................................................................................18140.00401600024
...................................................................................................................................................ACTGAGATCGATTGGTGCG...........................................................................................................................................................19137.0037370000
.....................................................................................................................................................TGAGATCGATTGGTGCATAGATA.....................................................................................................................................................23136.0036000036
..................................................................................................................................................AACTGAGATCGATTGGTGCATA.........................................................................................................................................................22133.0033310002
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGATT.....................................................................................................................................................25133.0033290004
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................24129.0029270002
...................................................................................................................................................ACTGAGATCGATTGGTGCATAC........................................................................................................................................................22126.0026240002
....................................................................................................................................................CTGAGATCGATTGGTGCATAGG.......................................................................................................................................................22123.0023230000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAC......................................................................................................................................................24123.0023190004
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGC.....................................................................................20120.0020000020
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGATAA----T...............................................................................................................................................27120.0020140006
....................................................................................................................................................CTGAGATCGATTGGTGCAT..........................................................................................................................................................19117.0017120005
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT....................................................................................21117.0017000017
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................24117.0017150002
...................................................................................................................................................ACTGAGATCGATTGGTGC............................................................................................................................................................18116.0016160000
..................................................................................................................................................AACTGAGATCGATTGGTGCA...........................................................................................................................................................20116.0016150001
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGCA......................................................................................................................................................24116.0016160000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAAT.....................................................................................................................................................25116.0016160000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGA.......................................................................................20115.0015000015
droVir3
AA-------------------GTGCT-----------TCA------ATATAT---ATA--TATATATATAGA----------------CTAATACGACACCCAACTA----------TG-CA-C---CAGCCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATATCGCCC--AAAA--AGTAATTC---------AT-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTCGAACCGATCAGCGGCGCATCAAAAC-AAGTGTTT----------------CG-CGTGTA-------TT--------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................23152244.005224403013711401000000703337331196310931082570371217784514131687413532103361600000000000000000002162622503100000000100000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................22132465.003246511433192232301010000487923805731392301516064398143901114120242515640223330912151000000000000000000502925824012730010113200000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................23111133.00111332309367130001616001112238341178499267191000116001010000000001100010003021041514392900102134401628444703030
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................21110390.0010390112573100100000111560846285671123359321393948011018281710131001000000000000000005022586900031100100000030
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT.....................................................................................2219468.00946803920010000000128768521358811664821969110400111211011030512000000000000000000002929900000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCAT..........................................................................................................................................................2116987.00698795616510000005000057301432763017688000001200000000000000000000000000015002722000010000101001120
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................2415964.0059649850943000040820107240172536550409200000420200000000001000020000000012820213260012412212102014700003
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGT.......................................................................................2014924.004924214600000000000342185821524341970424278010100203000000220000000000000000010127672800000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAG........................................................................................................................................................2312983.00298352219610012003000097361839536035110300000130000001100000000000000000006002151600012334010311033
...................................................................................................................................................ACTGAGATCGATTGGTGCATAG........................................................................................................................................................2212590.0025902920634000000000005628121630250333900000000000010000000000000000000003012261000012011220110102
...................................................................................................................................................ACTGAGATCGATTGGTGCAT..........................................................................................................................................................2011765.001765321555100000030000513251080717000000000000000000000000000000000040095600000000001010000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGG.......................................................................................................................................................2311298.00129830126800000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA....................................................................................2311137.001137002000000000001449713451007601731690113000010004120000000000000000000000303002000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA.....................................................................................221898.0089804510000000000452516294825077780000000000200001000000000000000000100537102000000000000001
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT...................................................................................241851.008510070000000000014897276652760125172000000000000001000000000000000000000078000200000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGG.......................................................................................................................................................241717.007171869900000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAG........................................................................................191687.006870810000000000032298173321033280000010000000000000000000000000000200471100000000000000002
..................................................................................................................................................AACTGAGATCGATTGGTGCATA.........................................................................................................................................................221471.0047153810000000000001160594059001000000000000000000000000000000000026500000002020000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................231415.004153388000000000000010000012000000000000000000000000000000000060013000000001000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATA.........................................................................................................................................................211411.004115314000000000000434691018000000000000000000000000000000000000049500000011000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................241401.004014362000000000000610122011000000000000000000000000000000000060014000000000000000100
...................................................................................................................................................ACTGAGATCGATTGGTGCA...........................................................................................................................................................191321.003214281100000000000110110013000000000000000000000000000000000000025000000001000100000
..................................................................................................................................................AACTGAGATCGATTGGTGCAC..........................................................................................................................................................211302.00302529500000000000000000000000000000000000000000000000000000000002000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................241249.00249219900000002000056116004900001000000011000000000000000000004000100000002110200000
..................................................................................................................................................AACTGAGATCGATTGGTGCA...........................................................................................................................................................201240.002402204100000000000010021053000000000020000000000000000000000030013000010002000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATT.........................................................................................................................................................221183.001830162000000000000410001020000000000000000000000000000000000010012000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................251176.00176013300000000000033003304500000000010000000000000000000000001015000040101202200002
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC.....................................................................................231164.0016402100000000000202139131402733000000000000010000000000000000000000020000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGC............................................................................................................................................................181149.00149114510000000000001000001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAT........................................................................................................................................................231142.00142113200000000000000000301100000000000000000000000000000000000004000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATT.........................................................................................................................................................211136.00136013200000000000000010001000000000000000000000000000000000001001000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGAT......................................................................................................................................................251121.00121110900000000000001101001000000000000000000000000000000000002003000000000010000001
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT......................................................................................211121.0012101000000000000821470022000000000000000000000000000000000000093100000000000000000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT....................................................................................241114.0011400100000000000218143702818000010000000000000000000000000000000022000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAT......................................................................................................................................................241110.00110310300000000000010000100000000000000000000000000000000000001001000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCAG..........................................................................................................................................................211109.00109210700000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC....................................................................................231108.001080300000000000067157611214000001000000000000000000000000000000045000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCAC..........................................................................................................................................................20195.009539100000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAA........................................................................................................................................................23194.009408000000000000040011200100000000010000000000000000000000000004000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA......................................................................................21175.007500000000000000260263043000000000000000000000000000000000000049000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATTT........................................................................................................................................................23172.007206600000000000010000000100000000000000000000000000000000000004000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAT........................................................................................................................................................22171.007107100000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................24168.006826400000000000001000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT....................................................................................22165.0065001100000000000820421076000000000000000000000000000000000000024000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA....................................................................................23161.006100000000000100530213053000000000000000000000000000000000000038000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTTT..................................................................................25157.005700100000000000136372608900000000000000000000000000000000000002000000000000000000
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC.....................................................................................21143.0043001500000000000201122034000000000000000000000000000000000000013000000000000000000
....................................................................................................................................................CTGAGATCGATTGGTGCATAGA.......................................................................................................................................................22143.004313710000000000000010000000000000000000000000000000000000000002000000000100000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCA.........................................................................................18142.00420110000000000062144505300000000010000000000000000000000000009000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA....................................................................................23140.004001100000000000500151053000000000000000000000000000000000000016100000000000001000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAA........................................................................................................................................................22140.004013800000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGC.......................................................................................20139.003900000000000000000100001000000000000000000000000000000000000037000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGT............................................................................................................................................................18138.003803500000000000000000000000000000000000000000000000000000000003000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGC............................................................................................................................................................19135.003503200000000000000001100100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGCT....................................................................................19130.00300010000000000073144201400000000000000000000000000000000000003000000000000000000
.....................................................................................................................................................TGAGATCGATTGGTGCATAGAT......................................................................................................................................................22130.00300800000001000051000104100000000000000000000000000000000001114000000000001000001
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG....................................................................................23130.003001000000000000230131001000000000000000000000000000000000000018000000000000000000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG......................................................................................22130.00300010000000000052204404200000000000000000000000000000000000006000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTC...................................................................................24129.00290050000000000050002100800100200200000001000000000000000000002000000000000000000
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTG......................................................................................18127.002700000000000000100132002000000000000000000000000000000000000018000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG.....................................................................................22126.002609000000000000000000002000000000000000000000000000000000000015000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTA...................................................................................24126.00260020000000000042001301600110000000000000000000000000000000000005000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCAG..........................................................................................................................................................20126.002602600000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TATCGCCC--AAAA--AGTAATTC---------AT-T..................................................................................................................23125.00250000000000000044020203400000000000000000000000000000000000006000000000000000000
.....................................................................................................................................................TGAGATCGATTGGTGCATAG........................................................................................................................................................20123.002306000000000000120010020000000000000000000000000000000000000011000000000000000000
..........................................................................................................................................................................TATCGCCC--AAAA--AGTAATTC---------AT-...................................................................................................................22122.00220000000000000095022001100000000000000000000000000000000000002000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCAA...................................................................................24122.00220000000000000012004103500000000000011000000000000000000000001002100000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATTT........................................................................................................................................................22121.002102000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT.....................................................................................22221.004200000000000000351161035000000000000000000000000000000000000017000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTAA.....................................................................................22120.002000000000000000010010020000000000000000000000000000000000000016000000000000000000
..........................................................................................................................................................................TATCGCCC--AAAA--AGTAATTC---------A.....................................................................................................................21120.00200040000000000042002001500000000000000000000000000000000000002000000000000000000
..........................................................................................................................................................................TATCGCCC--AAAA--AGTAATTC---------AT-TT.................................................................................................................24119.00190000000000000062210101500000000000000000000000000000000000010000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCG...........................................................................................................................................................19119.001921700000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TGAGATCGATTGGTGCATAGA.......................................................................................................................................................21118.00180410000001000021013100100000000000000000000000000000000001002000000000000000000
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGT.....................................................................................23117.00170000000000000011003106200000000000000000000000000000000000003000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC......................................................................................21117.001700000000000000010000012000000001000000000000000000000000000012000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGA.......................................................................................20117.001700100000000000000000000000000000000000000000000000000000000016000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAC........................................................................................................................................................22116.001601400000000000000000000000000000000000000000000000000000000002000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATAC........................................................................................................................................................23116.001611400000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCAA..........................................................................................................................................................21116.001611200000000000010000000000000000000000000000000000000000000002000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................23116.00160800000000000000000200100000000000000000000000000000000000005000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGG.......................................................................................20115.001501000000000000000100000000000000000000000000000000000000000013000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTCT.....................................................................................22114.001400000000000000020000011000000000000000000000000000000000000010000000000000000000
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGC.....................................................................................20114.00140010000000000022001001100000000000000000000000000000000000006000000000000000000
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT....................................................................................21114.001400000000000000010001010000000000000000000000000000000000000011000000000000000000
...........................................................................................................................................................................................................................CCATTCGAAATCAGTGCT....................................................................................18114.00140200010000000021010101000000000000000000000000000000000000005000000000000000000
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGC.....................................................................................18113.00130400000000000031011000100000000000000000000000000000000000002000000000000000000
....................................................................................................................................................................................................................TCTAGCACCATTCGAAATCAGTGC.....................................................................................24113.00130000000000000011001304100000000000000001000000000000000000001000000000000000000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTAA...................................................................................24112.00120000000000000020011200000000000000000000000000000000000000006000000000000000000
...................................................................................................................................................ACTGAGATCGATTGGTGG............................................................................................................................................................18112.001201200000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AACTGAGATCGATTGGTGCATTTT.......................................................................................................................................................24112.001201200000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
TAA--A--------------AAAAAT-----------GAA------GTAGTGCCTAGATA------ATATTA---------------TCTATTATGCCACACACCCAGCAGACATCAAA-CACC---ACACCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATAACGCCC-AAAAA--GTCATTTT---------AT-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTGGAACCGATCAACGGTGTATGGGAAC-AAGTGTCT-A---ACAGTGATCTATG-AATATG-------TTGCGAAAGASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................23153724.0053724161819758335809208
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................22113595.001359513166178712510352
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGT.......................................................................................2013586.0035863012022329052
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT.....................................................................................2213513.0035137012132226265
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................2312457.002457108861133810230
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................2112000.0020003217991151512
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGA.......................................................................................................................................................2411845.0018459463210514145
..................................................................................................................................................AACTGAGATCGATTGGTGCAT..........................................................................................................................................................2111458.00145830508877070
..................................................................................................................................................AACTGAGATCGATTGGTGCATAG........................................................................................................................................................2311244.00124460450732155
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA.....................................................................................221374.003740013224200
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAG........................................................................................191368.003680015421301
...................................................................................................................................................ACTGAGATCGATTGGTGCATAG........................................................................................................................................................221273.0027300101158014
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA....................................................................................231252.00252009315900
..................................................................................................................................................AACTGAGATCGATTGGTGCATA.........................................................................................................................................................221152.00152006181010
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT....................................................................................24184.008420235900
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................25181.008100284607
...................................................................................................................................................ACTGAGATCGATTGGTGCATA.........................................................................................................................................................21180.008000383813
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC....................................................................................23177.007700294620
...................................................................................................................................................ACTGAGATCGATTGGTGCAT..........................................................................................................................................................20176.007610314004
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT....................................................................................22162.0062100203200
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT...................................................................................24161.006110213900
..................................................................................................................................................AACTGAGATCGATTGGTGCA...........................................................................................................................................................20160.006000233601
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA....................................................................................23147.004700153101
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................24139.003900102603
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGAA......................................................................................................................................................24137.003700142102
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGT.......................................................................................................................................................23137.00370092503
..................................................................................................................................................AACTGAGATCGATTGGTGCATAT........................................................................................................................................................23133.003300141900
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC.....................................................................................23130.003000161040
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT......................................................................................21125.002500111400
..................................................................................................................................................AACTGAGATCGATTGGTGCATAA........................................................................................................................................................23124.00240041901
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA......................................................................................21124.00240042000
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT.....................................................................................22124.00240081600
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC.....................................................................................21124.0024918600
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG....................................................................................23123.00230091400
...................................................................................................................................................ACTGAGATCGATTGGTGCA...........................................................................................................................................................19119.00190081100
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGAT......................................................................................................................................................25118.00180041103
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA....................................................................................23117.00170021401
........................................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT....................................................................................21116.00160061000
...................................................................................................................................................ACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................23114.0014006800
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTC...................................................................................24113.00130031000
.....................................................................................................................................................TGAGATCGATTGGTGCATAGAT......................................................................................................................................................22112.0012105600
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGA.......................................................................................20112.0012005700
..................................................................................................................................................AACTGAGATCGATTGGTGCATT.........................................................................................................................................................22112.0012004800
....................................................................................................................................................CTGAGATCGATTGGTGCATAGA.......................................................................................................................................................22111.0011103601
..................................................................................................................................................AACTGAGATCGATTGGTGCATAGC.......................................................................................................................................................24111.0011003800
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGT.......................................................................................21110.0010102700
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG.....................................................................................22110.0010005500
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTA...................................................................................24110.0010007300
.........................................................................................................................................................................................................................CACCATTCGAAATCAGTG......................................................................................18110.00100001000
..........................................................................................................................................................................................................................ACCATTCGAAATCAGTGCT....................................................................................1918.008004400
......................................................................................................................................................................................................................TAGCACCATTCGAAATCA.........................................................................................1818.008004400
.....................................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG......................................................................................2217.007002500
....................................................................................................................................................................................................................TCTAGCACCATTCGAAATCAGT.......................................................................................2217.007003400
.......................................................................................................................................................................................................................AGCACCATTCGAAATCAGTGT.....................................................................................2117.007102400
...................................................................................................................................................ACTGAGATCGATTGGTGT............................................................................................................................................................1817.007003400
..................................................................................................................................................AACTGAGATCGATTGGTGCAA..........................................................................................................................................................2116.006000600
.....................................................................................................................................................TGAGATCGATTGGTGCATAGA.......................................................................................................................................................2116.006000600
droGri2
TAC--A--------------AT---------------GAAGGAGCAGT--C-----AA--------TCA----CTAAT-------AAC----------------C---------------TATGTAGCAGCCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATATCGTCCAAGA----ATAATTTA---------AT-TTCAATTCTAGCACCATTCGAAATCAGTGCTTTGTATTGGAACCGATCAGCGGCGCATTAGCACAAAGTGTTTC-----AAGTGATTTATCAAA-----------------AGTGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC.....................................................................................2213.00312
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG......................................................................................2111.00101
......................................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT....................................................................................2311.00110

Generated: 10/20/2015 at 07:35 PM