dya-mir-263a

ATTTAAAGTGACAAAACAAGAAAAGCAAATATACCAGCTGCTGGTATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTTATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAATGAAACAAAATCCAAATGAATCTAAGCTGAAAATGTGC ************************************************..(((((.(((.((..(((.((((((.(((..(((((((...............)))))))))).)))))).)))..)).)))))))).....*********************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M056 embryo	M043 female body	V120 male body	M026 head	V058 head	GSM1528802 follicle cells	V046 embryo	V052 head	SRR1275484 Male prepupae	SRR1275486 Male prepupae	SRR1275488 Male larvae
.................................................................AATGGCACTGGAAGAATTCACGGG.....................................................................................................	24	0	1	377530.00	377530	272623	24924	17384	25256	4935	16152	14022	1470	494	175	95
.................................................................AATGGCACTGGAAGAATTCACGG......................................................................................................	23	0	1	71261.00	71261	33409	13923	10218	10242	1734	210	718	551	159	63	34
.................................................................AATGGCACTGGAAGAATTCACG.......................................................................................................	22	0	1	40422.00	40422	4276	9506	14271	2532	7087	51	603	2087	6	1	2
.................................................................AATGGCACTGGAAGAATTCAC........................................................................................................	21	0	1	27696.00	27696	4937	4028	9886	1600	5342	8	428	1466	0	1	0
.................................................................AGTGGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	10783.00	10783	10723	11	7	19	5	2	15	1	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGGT....................................................................................................	25	1	1	9776.00	9776	3531	1213	2098	323	485	1768	163	139	43	7	6
.................................................................AATGGCACTGGAAGAATTCA.........................................................................................................	20	0	1	9711.00	9711	160	1716	4254	143	2622	0	48	767	1	0	0
.................................................................AATTGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	7479.00	7479	7356	9	11	91	1	8	0	1	1	1	0
.................................................................AACGGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	7393.00	7393	7321	11	13	16	15	2	13	2	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGGA....................................................................................................	25	1	1	5457.00	5457	2517	427	411	1574	144	239	62	61	16	3	3
..................................................................ATGGCACTGGAAGAATTCACGGG.....................................................................................................	23	0	1	3793.00	3793	356	2588	18	19	2	799	11	0	0	0	0
.................................................................ATTGGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	2459.00	2459	2453	0	3	0	1	0	1	1	0	0	0
.................................................................AATGGCACTGGAAGAATTC..........................................................................................................	19	0	1	2385.00	2385	3	195	702	851	489	3	2	139	1	0	0
..........................................................................................................CGTGATCTCTTAGTGGCATCTA..............................................................	22	0	1	2334.00	2334	1854	124	28	130	15	0	169	9	4	1	0
.................................................................AATGGCACTGGAAGAATTCACGGC.....................................................................................................	24	1	1	2189.00	2189	1986	21	81	47	18	10	16	10	0	0	0
..................................................................ATGGCACTGGAAGAATTCACGG......................................................................................................	22	0	1	1553.00	1553	35	1483	12	17	2	0	1	2	0	1	0
.................................................................AATGGCACTGGAAGAATTCACGGT.....................................................................................................	24	1	1	1391.00	1391	614	215	318	11	138	38	14	25	8	4	6
.................................................................AGTGGCACTGGAAGAATTCACGG......................................................................................................	23	1	1	1273.00	1273	1249	8	6	6	2	0	2	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGGC....................................................................................................	25	1	1	1246.00	1246	1138	11	19	50	6	11	11	0	0	0	0
.................................................................AATGGCACTGGAAGCATTCACGGG.....................................................................................................	24	1	1	1114.00	1114	885	1	30	3	83	1	98	13	0	0	0
..................................................................ATGGCACTGGAAGAATTCACG.......................................................................................................	21	0	1	1042.00	1042	5	1007	21	3	2	0	1	3	0	0	0
.................................................................AATGGCACTGGACGAATTCACGGG.....................................................................................................	24	1	1	964.00	964	897	0	6	1	31	1	26	2	0	0	0
.................................................................AATTGCACTGGAAGAATTCACGG......................................................................................................	23	1	1	945.00	945	897	6	10	30	2	0	0	0	0	0	0
.................................................................AACGGCACTGGAAGAATTCACGG......................................................................................................	23	1	1	939.00	939	923	4	6	3	1	0	0	2	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGTG.....................................................................................................	24	1	1	929.00	929	744	5	48	0	74	10	22	23	0	2	1
.................................................................AATGGCACGGGAAGAATTCACGGG.....................................................................................................	24	1	1	903.00	903	16	874	0	0	5	3	5	0	0	0	0
.................................................................AATGGCAATGGAAGAATTCACGGG.....................................................................................................	24	1	1	883.00	883	782	1	3	1	14	60	20	2	0	0	0
................................................................CAATGGCACTGGAAGAATTCACGGG.....................................................................................................	25	1	1	874.00	874	808	39	8	5	2	0	8	4	0	0	0
.................................................................TATGGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	853.00	853	835	12	2	3	0	1	0	0	0	0	0
.................................................................AATGTCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	753.00	753	667	16	14	47	0	4	3	1	0	1	0
.................................................................AATGGCACTGGAAGAATTCCCGGG.....................................................................................................	24	1	1	651.00	651	13	2	11	129	80	347	55	11	1	1	1
.................................................................AATGGCACTGGAAGAATTCACGT......................................................................................................	23	1	1	589.00	589	131	114	165	21	119	0	4	33	2	0	0
.................................................................AATGGCACTGAAAGAATTCACGGG.....................................................................................................	24	1	1	565.00	565	532	1	6	9	0	7	9	0	1	0	0
..................................................................AATGCACTGGAAGAATTCACGGG.....................................................................................................	23	2	1	558.00	558	476	2	28	51	0	0	1	0	0	0	0
..........................................................................................................CTTGATCTCTTAGTGGCATCTA..............................................................	22	1	1	530.00	530	530	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGGACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	500.00	500	484	1	0	6	2	2	5	0	0	0	0
.................................................................AATGGCACGGGAAGAATTCACGG......................................................................................................	23	1	1	492.00	492	1	489	1	0	1	0	0	0	0	0	0
.................................................................AATCGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	483.00	483	410	9	16	39	2	0	3	4	0	0	0
.................................................................AATGGCACTGGAAGAATTCTCGGG.....................................................................................................	24	1	1	468.00	468	435	4	2	1	14	4	8	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGA.....................................................................................................	24	1	1	440.00	440	241	81	38	25	15	30	4	5	1	0	0
.................................................................AATGGCACTGGAAGATTTCACGGG.....................................................................................................	24	1	1	432.00	432	421	0	3	0	4	1	3	0	0	0	0
..................................................................ATGGCACTGGAAGAATTCAC........................................................................................................	20	0	1	430.00	430	3	416	6	0	4	0	1	0	0	0	0
.................................................................AATGGCACTGGAAGAATTTACGGG.....................................................................................................	24	1	1	422.00	422	371	6	7	7	1	15	15	0	0	0	0
.................................................................AATGGAACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	416.00	416	48	3	4	6	10	328	16	1	0	0	0
.................................................................AATGGCACTGGCAGAATTCACGGG.....................................................................................................	24	1	1	398.00	398	105	0	5	100	58	5	108	17	0	0	0
.................................................................AATGGCACAGGAAGAATTCACGGG.....................................................................................................	24	1	1	397.00	397	21	369	1	1	0	4	0	1	0	0	0
.................................................................AATGGCACCGGAAGAATTCACGGG.....................................................................................................	24	1	1	392.00	392	185	166	9	11	3	6	10	1	0	0	1
.................................................................AATGGCACTGGAAGAATTAACGGG.....................................................................................................	24	1	1	388.00	388	40	5	6	22	9	282	18	0	2	3	1
.................................................................AATGGCACGGGAAGAATTCACG.......................................................................................................	22	1	1	385.00	385	0	368	3	1	11	0	0	2	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGGG....................................................................................................	25	0	1	378.00	378	127	12	11	213	2	6	6	1	0	0	0
.................................................................AATAGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	365.00	365	320	7	10	13	0	1	13	1	0	0	0
.................................................................AATGGCGCTGGAAGAATTCACGGG.....................................................................................................	24	1	1	345.00	345	274	10	5	18	8	1	27	2	0	0	0
.................................................................AATGGTACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	333.00	333	266	1	5	10	2	41	6	0	2	0	0
.................................................................AATGGCACTGGAAGAATTCACGGGTT...................................................................................................	26	1	1	318.00	318	46	53	127	27	18	38	4	4	0	0	1
.................................................................AATGGCACTTGAAGAATTCACGGG.....................................................................................................	24	1	1	318.00	318	261	4	3	26	3	16	3	1	1	0	0
.................................................................AATGCCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	317.00	317	262	5	11	34	1	0	4	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACTGG.....................................................................................................	24	1	1	311.00	311	197	16	16	7	30	10	19	12	1	1	2
..........................................................................................................CGTGATCTCTTAGTGGCATCT...............................................................	21	0	1	308.00	308	205	21	14	26	4	0	31	7	0	0	0
.................................................................GATGGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	303.00	303	164	87	8	18	2	4	15	3	0	2	0
.................................................................ATTGGCACTGGAAGAATTCACGG......................................................................................................	23	1	1	294.00	294	288	1	2	1	2	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACA.......................................................................................................	22	1	1	293.00	293	13	44	116	14	85	0	2	19	0	0	0
..........................................................................................................CGCGATCTCTTAGTGGCATCTA..............................................................	22	1	1	291.00	291	291	0	0	0	0	0	0	0	0	0	0
.................................................................AATGACACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	283.00	283	246	4	7	13	0	0	13	0	0	0	0
.................................................................AATGGCACTGGAAAAATTCACGGG.....................................................................................................	24	1	1	269.00	269	174	7	11	7	1	62	5	0	0	0	2
.................................................................AATGGCACTGGAAGAATTCACAGG.....................................................................................................	24	1	1	267.00	267	144	37	11	13	9	5	41	7	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGGAA...................................................................................................	26	2	1	255.00	255	33	12	5	193	1	10	0	1	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGC......................................................................................................	23	1	1	250.00	250	173	2	44	12	15	0	1	2	0	0	1
.................................................................AATGGCACTGGAAGAATTCACGAG.....................................................................................................	24	1	1	247.00	247	183	2	19	4	11	1	18	9	0	0	0
.................................................................AATGGCACAGGAAGAATTCACGG......................................................................................................	23	1	1	247.00	247	3	242	2	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCGCGGG.....................................................................................................	24	1	1	236.00	236	169	12	13	12	7	4	19	0	0	0	0
.................................................................AATGGCACTGCAAGAATTCACGGG.....................................................................................................	24	1	1	233.00	233	176	1	9	18	2	22	4	1	0	0	0
.................................................................AATGGCACTGGAGGAATTCACGGG.....................................................................................................	24	1	1	228.00	228	158	15	21	8	7	0	18	1	0	0	0
.................................................................AATGGCACTGGAAGAATTCACT.......................................................................................................	22	1	1	224.00	224	5	34	96	4	67	0	1	17	0	0	0
.................................................................AGTGGCACTGGAAGAATTCAC........................................................................................................	21	1	1	217.00	217	201	4	2	2	6	0	0	2	0	0	0
.................................................................AATGGCACTGGAATAATTCACGGG.....................................................................................................	24	1	1	214.00	214	124	3	5	6	2	72	1	1	0	0	0
.................................................................AATGGCACTAGAAGAATTCACGGG.....................................................................................................	24	1	1	208.00	208	133	5	10	11	7	7	23	12	0	0	0
.................................................................AATGGCACTGGAAGGATTCACGGG.....................................................................................................	24	1	1	208.00	208	112	7	13	17	19	1	37	2	0	0	0
...................................................................TGGCACTGGAAGAATTCACGGG.....................................................................................................	22	0	1	205.00	205	29	139	6	2	0	29	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACCGG.....................................................................................................	24	1	1	205.00	205	90	8	28	3	11	3	52	10	0	0	0
.................................................................AATGGCACTGTAAGAATTCACGGG.....................................................................................................	24	1	1	203.00	203	96	5	4	84	3	9	0	0	1	1	0
.................................................................AATGGCACGGGAAGAATTCAC........................................................................................................	21	1	1	196.00	196	0	188	0	1	7	0	0	0	0	0	0
.................................................................AACGGCACTGGAAGAATTCAC........................................................................................................	21	1	1	196.00	196	174	2	7	2	8	0	1	2	0	0	0
.................................................................AGTTGCACTGGAAGAATTCACGGG.....................................................................................................	24	2	1	193.00	193	193	0	0	0	0	0	0	0	0	0	0
..................................................................ATGGCACTGGAAGAATTCA.........................................................................................................	19	0	1	189.00	189	0	183	4	0	0	0	0	2	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGCG.....................................................................................................	24	1	1	187.00	187	51	3	51	1	36	1	33	10	0	0	1
.................................................................AATGGCAGTGGAAGAATTCACGGG.....................................................................................................	24	1	1	185.00	185	35	0	2	0	2	146	0	0	0	0	0
.................................................................AATGGCACTGGAAGAGTTCACGGG.....................................................................................................	24	1	1	185.00	185	130	12	9	3	5	1	20	5	0	0	0
.................................................................AATGGCACTGGGAGAATTCACGGG.....................................................................................................	24	1	1	172.00	172	75	3	15	6	16	0	52	5	0	0	0
.................................................................AATGGCACTGGAAGAATTCCCG.......................................................................................................	22	1	1	172.00	172	0	2	16	17	111	0	4	22	0	0	0
.................................................................AGTGGCACTGGAAGAATTCACG.......................................................................................................	22	1	1	170.00	170	144	2	3	3	17	0	0	1	0	0	0
.................................................................AATGGCACTGGAAGAATCCACGGG.....................................................................................................	24	1	1	168.00	168	121	5	13	1	6	7	14	1	0	0	0
.................................................................AATGGCACTGGAAGAATTCATGGG.....................................................................................................	24	1	1	167.00	167	101	2	14	16	3	19	10	2	0	0	0
.................................................................AATGGCACTGGAAGAATTCAAGGG.....................................................................................................	24	1	1	164.00	164	5	4	4	9	6	111	23	1	1	0	0
.................................................................AATGGCACTGGACGAATTCACGGT.....................................................................................................	24	2	1	162.00	162	160	0	1	0	1	0	0	0	0	0	0
.................................................................AATTGCACTGGAAGAATTCACG.......................................................................................................	22	1	1	159.00	159	109	5	10	33	2	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATGCACGGG.....................................................................................................	24	1	1	153.00	153	54	0	1	0	12	78	8	0	0	0	0
.................................................................AATGGCACTCGAAGAATTCACGGG.....................................................................................................	24	1	1	150.00	150	114	2	11	9	3	6	4	1	0	0	0
.................................................................AATGGCACTGGAAGCATTCACGG......................................................................................................	23	1	1	150.00	150	107	0	14	2	23	0	3	0	0	1	0
.................................................................AATGGCACTGGAAGCATTCAC........................................................................................................	21	1	1	149.00	149	28	0	16	0	91	0	3	11	0	0	0
.................................................................AATGGCATTGGAAGAATTCACGGG.....................................................................................................	24	1	1	148.00	148	83	0	4	5	2	46	6	1	1	0	0
.................................................................AATTGCACTGGAAGAATTCAC........................................................................................................	21	1	1	148.00	148	102	5	7	30	4	0	0	0	0	0	0
................................................................CAATGGCACTGGAAGAATTCACGG......................................................................................................	24	1	1	148.00	148	122	18	6	1	0	0	1	0	0	0	0
.................................................................AATGGCACTGGACGAATTCACGG......................................................................................................	23	1	1	146.00	146	138	0	0	0	5	0	2	0	1	0	0
.................................................................AACGGCACTGGAAGAATTCACG.......................................................................................................	22	1	1	143.00	143	119	4	8	0	8	0	1	3	0	0	0
.................................................................AATGGCACTGGAAGAAGTCACGGG.....................................................................................................	24	1	1	140.00	140	88	0	0	0	7	33	11	1	0	0	0
.................................................................AATGGCACCGGAAGAATTCACGG......................................................................................................	23	1	1	140.00	140	19	104	6	8	3	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGCATTCACG.......................................................................................................	22	1	1	138.00	138	17	1	22	0	85	0	0	13	0	0	0
..................................................................ATGGCACTGGAAGAATTCACGGGT....................................................................................................	24	1	1	133.00	133	6	103	3	2	0	16	0	3	0	0	0
.................................................................AACGGCACTGGACGAATTCACGGG.....................................................................................................	24	2	1	131.00	131	131	0	0	0	0	0	0	0	0	0	0
.................................................................AGTGGCACTGGAAGAATTCACGGGT....................................................................................................	25	2	1	130.00	130	130	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGCAGAATTCAC........................................................................................................	21	1	1	128.00	128	1	0	1	5	100	0	5	16	0	0	0
.................................................................AATGGCACAGGAAGAATTCACG.......................................................................................................	22	1	1	126.00	126	0	120	4	0	2	0	0	0	0	0	0
.................................................................AAGGGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	122.00	122	54	0	1	2	26	3	34	2	0	0	0
.................................................................TATGGCACTGGAAGAATTCACGG......................................................................................................	23	1	1	120.00	120	113	4	1	1	0	0	0	1	0	0	0
.................................................................AATGGCACTGGAAGAATTCCCGG......................................................................................................	23	1	1	116.00	116	0	1	19	65	16	6	5	3	0	1	0
.................................................................AATGGCAATGGAAGAATTCACGG......................................................................................................	23	1	1	114.00	114	106	1	3	1	3	0	0	0	0	0	0
..........................................................................................................CTCGATCTCTTAGTGGCATCTA..............................................................	22	2	1	114.00	114	114	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGA......................................................................................................	23	1	1	114.00	114	24	30	31	9	11	0	0	9	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGAC.....................................................................................................	24	2	1	113.00	113	104	0	5	1	1	0	2	0	0	0	0
.................................................................AATGTCACTGGAAGAATTCACGG......................................................................................................	23	1	1	109.00	109	89	9	1	10	0	0	0	0	0	0	0
...................................................................TGGCACTGGAAGAATTCACGG......................................................................................................	21	0	1	107.00	107	4	96	5	1	0	1	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATT...........................................................................................................	18	0	1	107.00	107	13	24	13	2	35	0	0	20	0	0	0
.................................................................AATGTCACTGGAAGAATTCAC........................................................................................................	21	1	1	106.00	106	16	0	10	75	4	0	0	1	0	0	0
..................................................................AATGCACTGGAAGAATTCACGG......................................................................................................	22	2	1	102.00	102	76	5	3	18	0	0	0	0	0	0	0
.................................................................AACGGCACTGGAAGAATTCACGGGT....................................................................................................	25	2	1	96.00	96	93	0	3	0	0	0	0	0	0	0	0
.................................................................AATGGCACCGGAAGAATTCACG.......................................................................................................	22	1	1	95.00	95	4	64	9	0	15	0	1	2	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGTT....................................................................................................	25	2	1	94.00	94	18	15	40	3	11	0	0	5	0	1	1
.................................................................AATGGCACTGGAAGAATTCCC........................................................................................................	21	1	1	94.00	94	0	2	8	23	53	0	4	4	0	0	0
.................................................................AATGGCACTGGAACAATTCACGGG.....................................................................................................	24	1	1	93.00	93	28	1	6	4	1	51	1	1	0	0	0
.....................................................................GCACTGGAAGAATTCACGGG.....................................................................................................	20	0	1	91.00	91	7	25	11	28	0	20	0	0	0	0	0
.................................................................AACTGCACTGGAAGAATTCACGGG.....................................................................................................	24	2	1	91.00	91	91	0	0	0	0	0	0	0	0	0	0
.................................................................GATGGCACTGGAAGAATTCACGG......................................................................................................	23	1	1	90.00	90	24	54	8	1	2	0	1	0	0	0	0
.................................................................AATGGCACGGGAAGAATTCA.........................................................................................................	20	1	1	90.00	90	0	86	0	0	4	0	0	0	0	0	0
.................................................................AGTGGCACTGGAAGAATTCACGGC.....................................................................................................	24	2	1	89.00	89	89	0	0	0	0	0	0	0	0	0	0
.................................................................AATTGCACTGGAAGAATTCACGGGT....................................................................................................	25	2	1	89.00	89	80	2	2	4	0	1	0	0	0	0	0
.................................................................AGTGGCACTGGAAGAATTCACGGGA....................................................................................................	25	2	1	86.00	86	85	0	0	1	0	0	0	0	0	0	0
.................................................................AAAGGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	86.00	86	58	1	3	2	6	2	13	1	0	0	0
.................................................................AATGGCACTGGAAGAATTCACC.......................................................................................................	22	1	1	85.00	85	16	4	32	5	26	0	0	2	0	0	0
.................................................................AATCGCACTGGAAGAATTCACGG......................................................................................................	23	1	1	85.00	85	62	6	9	8	0	0	0	0	0	0	0
.................................................................AATGTCACTGGAAGAATTCACG.......................................................................................................	22	1	1	84.00	84	13	1	9	58	1	0	2	0	0	0	0
.................................................................AATGGCACTGGCAGAATTCACGG......................................................................................................	23	1	1	83.00	83	9	1	0	40	24	0	8	1	0	0	0
.................................................................AATGGCACTGGAAGAATACACGGG.....................................................................................................	24	1	1	83.00	83	54	2	4	3	1	14	4	0	1	0	0
....................................................................GGCACTGGAAGAATTCACGGG.....................................................................................................	21	0	1	82.00	82	27	34	7	1	2	9	2	0	0	0	0
.................................................................AATGGCACTGGAAGAACTCACGGG.....................................................................................................	24	1	1	82.00	82	40	4	7	6	5	3	17	0	0	0	0
.................................................................AATGGCACTGGAAGAATTTACGG......................................................................................................	23	1	1	82.00	82	70	1	7	3	1	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGACTTCACG.......................................................................................................	22	1	1	81.00	81	0	0	8	0	69	0	0	4	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGGTTT..................................................................................................	27	2	1	80.00	80	8	17	35	17	2	0	1	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCTCGG......................................................................................................	23	1	1	80.00	80	67	2	1	2	7	0	1	0	0	0	0
.................................................................AATGGCGCTGGAAGAATTCACGG......................................................................................................	23	1	1	76.00	76	44	7	12	9	2	0	2	0	0	0	0
.................................................................AATGGCACTGAAAGAATTCACGG......................................................................................................	23	1	1	76.00	76	62	3	4	5	0	0	0	2	0	0	0
.................................................................AATGGGACTGGAAGAATTCACGG......................................................................................................	23	1	1	76.00	76	71	0	3	2	0	0	0	0	0	0	0
...................................................................TGGCACTGGAAGAATTCACG.......................................................................................................	20	0	1	75.00	75	0	70	4	0	1	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGCATTCA.........................................................................................................	20	1	1	75.00	75	0	0	8	0	56	0	1	10	0	0	0
.................................................................AATGGCACTGGAAGAATTCAA........................................................................................................	21	1	1	74.00	74	7	13	14	11	18	0	4	7	0	0	0
................................................................AAATGGCACTGGAAGAATTCACGGG.....................................................................................................	25	1	1	74.00	74	5	13	0	0	0	56	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGGAT...................................................................................................	26	1	1	73.00	73	12	9	6	46	0	0	0	0	0	0	0
.................................................................AACGGCACTGGAAGAATTCACGGGA....................................................................................................	25	2	1	72.00	72	67	0	0	5	0	0	0	0	0	0	0
..................................................................AGGGCACTGGAAGAATTCACGGG.....................................................................................................	23	1	1	72.00	72	72	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCAGGGG.....................................................................................................	24	1	1	72.00	72	58	2	2	1	0	7	2	0	0	0	0
.................................................................AATGGCACTGGAAGACTTCACGGG.....................................................................................................	24	1	1	71.00	71	6	0	6	1	36	6	15	0	0	0	1
.................................................................AACGGCACTGGAAGAATTCACGGC.....................................................................................................	24	2	1	70.00	70	70	0	0	0	0	0	0	0	0	0	0
.............................................................GATCAATGGCACTGGAAGAATTCACGGG.....................................................................................................	28	3	1	69.00	69	69	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACAGGAAGAATTCAC........................................................................................................	21	1	1	68.00	68	0	66	1	0	0	0	0	1	0	0	0
...................................................................AATCACTGGAAGAATTCACGGG.....................................................................................................	22	3	1	68.00	68	51	0	3	14	0	0	0	0	0	0	0
.................................................................AATTGCACTGGAAGAATTCACGGGA....................................................................................................	25	2	1	68.00	68	55	0	0	13	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACAG......................................................................................................	23	1	1	68.00	68	35	14	6	3	3	0	2	5	0	0	0
..........................................................................................................CGTGATCTCTTAGTGGCATC................................................................	20	0	1	67.00	67	58	2	0	5	0	0	2	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACACG.....................................................................................................	24	2	1	66.00	66	66	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGCAGAATTCACG.......................................................................................................	22	1	1	66.00	66	1	1	3	12	38	0	1	10	0	0	0
.................................................................AATGGCACTGGAAGACTTCAC........................................................................................................	21	1	1	63.00	63	0	0	2	0	59	0	0	2	0	0	0
.................................................................AATGGCACTGGAAGATTTCACGG......................................................................................................	23	1	1	62.00	62	57	0	1	1	3	0	0	0	0	0	0
.................................................................AATGCCACTGGAAGAATTCACGG......................................................................................................	23	1	1	62.00	62	43	2	9	5	3	0	0	0	0	0	0
...............................................................TCAATGGCACTGGAAGAATTCACGGG.....................................................................................................	26	1	1	61.00	61	59	1	1	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGACGAATTCAC........................................................................................................	21	1	1	61.00	61	24	0	1	0	33	0	1	2	0	0	0
.................................................................AATGGCACTGGAAGAATTCAT........................................................................................................	21	1	1	60.00	60	31	0	4	1	16	0	1	7	0	0	0
.................................................................AATGGCACTGGAAGAATTGACGGG.....................................................................................................	24	1	1	59.00	59	43	2	0	0	2	3	8	1	0	0	0
.................................................................AATGGCACTGGAAGAAATCACGGG.....................................................................................................	24	1	1	58.00	58	32	2	0	2	3	5	13	1	0	0	0
..................................................................ATGGCACTGGAAGAATTCACGGGA....................................................................................................	24	1	1	58.00	58	1	54	1	1	0	1	0	0	0	0	0
.................................................................AATGGCACCGGAAGAATTCAC........................................................................................................	21	1	1	57.00	57	7	34	6	0	9	0	0	1	0	0	0
.................................................................GATGGCACTGGAAGAATTCACG.......................................................................................................	22	1	1	56.00	56	5	33	9	1	5	0	1	2	0	0	0
.................................................................CATGGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	55.00	55	30	5	5	2	6	2	5	0	0	0	0
.................................................................AATCGCACTGGAAGAATTCACG.......................................................................................................	22	1	1	55.00	55	9	2	8	18	14	0	0	4	0	0	0
.................................................................AATGGCACTGGAAGGATTCACGG......................................................................................................	23	1	1	54.00	54	24	5	10	8	6	0	1	0	0	0	0
..................................................................AATGCACTGGAAGAATTCACG.......................................................................................................	21	2	1	54.00	54	10	4	18	21	0	0	0	1	0	0	0
.................................................................AATGGCCCTGGAAGAATTCACGGG.....................................................................................................	24	1	1	53.00	53	10	0	2	19	8	7	6	0	1	0	0
.................................................................ATTGGCACTGGAAGAATTCACG.......................................................................................................	22	1	1	52.00	52	38	1	2	0	7	0	0	4	0	0	0
.................................................................AATAGCACTGGAAGAATTCACGG......................................................................................................	23	1	1	52.00	52	31	4	5	7	3	0	1	1	0	0	0
.................................................................AATGGCACTGGCAGAATTCA.........................................................................................................	20	1	1	51.00	51	0	0	2	1	40	0	1	7	0	0	0
.................................................................AATGGCACTGGAAGAATTCACTG......................................................................................................	23	1	1	51.00	51	19	14	7	0	8	0	0	3	0	0	0
.................................................................ATTTGCACTGGAAGAATTCACGGG.....................................................................................................	24	2	1	51.00	51	51	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCGCGG......................................................................................................	23	1	1	51.00	51	22	8	7	5	6	1	0	2	0	0	0
.................................................................AATGGCTCTGGAAGAATTCACGGG.....................................................................................................	24	1	1	50.00	50	31	1	7	0	5	0	5	1	0	0	0
.................................................................AATGGCACTGGGAGAATTCACG.......................................................................................................	22	1	1	49.00	49	2	2	5	0	33	0	3	4	0	0	0
.................................................................AATGGTACTGGAAGAATTCACGG......................................................................................................	23	1	1	49.00	49	35	3	5	4	2	0	0	0	0	0	0
.................................................................AATGGCACTGGAGGAATTCACGG......................................................................................................	23	1	1	48.00	48	22	11	11	2	2	0	0	0	0	0	0
.................................................................AATTGCACTGGAAGAATTCACGGC.....................................................................................................	24	2	1	48.00	48	48	0	0	0	0	0	0	0	0	0	0
..........................................................................................................CGTGATCTCTTAGTGGCATCC...............................................................	21	1	1	47.00	47	46	0	0	1	0	0	0	0	0	0	0
.................................................................AATGCCACTGGAAGAATTCACG.......................................................................................................	22	1	1	47.00	47	2	4	14	21	5	0	0	1	0	0	0
................................................................TAATGGCACTGGAAGAATTCACGGG.....................................................................................................	25	0	1	46.00	46	10	36	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGGTA...................................................................................................	26	2	1	46.00	46	10	6	12	15	1	0	1	1	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGTT.....................................................................................................	24	2	1	46.00	46	8	1	21	2	9	0	2	3	0	0	0
.................................................................AACGGCAATGGAAGAATTCACGGG.....................................................................................................	24	2	1	46.00	46	46	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGGATTCACG.......................................................................................................	22	1	1	45.00	45	3	2	15	2	17	0	1	5	0	0	0
.................................................................AACGGCACTGGAAGAATTCACGTG.....................................................................................................	24	2	1	45.00	45	45	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACAGGAAGAATTCA.........................................................................................................	20	1	1	45.00	45	0	42	1	0	2	0	0	0	0	0	0
.................................................................AATGGCACGGGAAGAATTCACGGGT....................................................................................................	25	2	1	44.00	44	0	43	0	0	1	0	0	0	0	0	0
.................................................................AATGGCACTGGTAGAATTCACGGG.....................................................................................................	24	1	1	44.00	44	14	0	3	0	7	2	18	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCACCG......................................................................................................	23	1	1	44.00	44	11	6	15	0	5	0	4	3	0	0	0
.................................................................AATGGCACTGGAAGAATTAACGG......................................................................................................	23	1	1	44.00	44	10	1	3	19	4	1	0	0	0	4	2
.................................................................AATGGCACTGGGAGAATTCAC........................................................................................................	21	1	1	43.00	43	2	0	6	2	27	0	1	5	0	0	0
................................................................CAATGGCACTGGAAGAATTCACG.......................................................................................................	23	1	1	43.00	43	14	14	10	1	4	0	0	0	0	0	0
.................................................................ATTGGCACTGGAAGAATTCAC........................................................................................................	21	1	1	43.00	43	39	0	1	1	2	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCCCGGGT....................................................................................................	25	2	1	42.00	42	0	0	1	1	4	34	2	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCTCG.......................................................................................................	22	1	1	42.00	42	8	1	1	0	28	0	0	4	0	0	0
.................................................................AATGGCACTGGGAGAATTCACGG......................................................................................................	23	1	1	42.00	42	13	3	6	7	8	0	4	1	0	0	0
.................................................................AATGGCACTGGACGCATTCACGGG.....................................................................................................	24	2	1	42.00	42	36	0	1	0	2	0	3	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCATGG......................................................................................................	23	1	1	41.00	41	20	1	5	11	3	0	1	0	0	0	0
.................................................................AACGGCACTGGAAGAATTCACGGGC....................................................................................................	25	2	1	41.00	41	41	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCGCTGGAAGAATTCACG.......................................................................................................	22	1	1	40.00	40	6	2	9	3	13	0	2	5	0	0	0
.................................................................AATGACACTGGAAGAATTCACGG......................................................................................................	23	1	1	40.00	40	26	3	2	5	3	0	0	1	0	0	0
.................................................................AATGGCACTGGATGAATTCACGGG.....................................................................................................	24	1	1	40.00	40	13	2	1	2	13	0	8	1	0	0	0
.................................................................AATGGCAATGGAAGAATTCACG.......................................................................................................	22	1	1	40.00	40	14	1	4	0	19	0	2	0	0	0	0
..................................................................AATGCACTGGAAGAATTCAC........................................................................................................	20	2	1	40.00	40	15	0	9	16	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAGGAATTCACG.......................................................................................................	22	1	1	39.00	39	2	6	13	1	15	0	0	2	0	0	0
.................................................................AATGGCACTGGACGAATTCACGTG.....................................................................................................	24	2	1	39.00	39	38	0	1	0	0	0	0	0	0	0	0
.................................................................AAGGGCACTGGAAGAATTCAC........................................................................................................	21	1	1	39.00	39	3	0	1	0	30	0	1	4	0	0	0
.................................................................AATGGCACTGGAAGTATTCACGGG.....................................................................................................	24	1	1	39.00	39	10	1	1	0	9	1	16	0	0	0	1
.................................................................GATGGCACTGGAAGAATTCAC........................................................................................................	21	1	1	39.00	39	6	14	7	1	6	0	0	5	0	0	0
.................................................................AATTGCACTGGAAGAATTCACGGT.....................................................................................................	24	2	1	39.00	39	36	0	1	1	0	0	0	0	0	1	0
.................................................................AATGGCACTAGAAGAATTCACG.......................................................................................................	22	1	1	38.00	38	2	0	7	0	8	0	1	20	0	0	0
.................................................................AATGGCACTGGAAGAATGCACG.......................................................................................................	22	1	1	38.00	38	0	0	0	1	33	1	1	2	0	0	0
..................................................................ATGGCACTAGAAGAATTCACGGG.....................................................................................................	23	1	1	38.00	38	0	38	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACTTGAAGAATTCACGG......................................................................................................	23	1	1	37.00	37	28	0	2	2	1	0	1	2	0	0	1
.................................................................AATGGCACTAGAAGAATTCACGG......................................................................................................	23	1	1	37.00	37	19	2	2	4	4	0	3	3	0	0	0
.................................................................AATCGCACTGGAAGAATTCAC........................................................................................................	21	1	1	37.00	37	6	2	7	10	11	0	0	1	0	0	0
.................................................................AATGGCACTGGTAGAATTCAC........................................................................................................	21	1	1	37.00	37	2	0	0	0	32	0	2	1	0	0	0
......................................................................CACTGGAAGAATTCACGGG.....................................................................................................	19	0	1	37.00	37	6	0	7	6	0	15	3	0	0	0	0
.................................................................AGTGGCACTGGACGAATTCACGGG.....................................................................................................	24	2	1	37.00	37	37	0	0	0	0	0	0	0	0	0	0
.................................................................AGTGGCAATGGAAGAATTCACGGG.....................................................................................................	24	2	1	37.00	37	37	0	0	0	0	0	0	0	0	0	0
..........................................................................................................CTTGATCTCTTAGTGGCATCT...............................................................	21	1	1	37.00	37	37	0	0	0	0	0	0	0	0	0	0
.................................................................ACTGGCACTGGAAGAATTCACGGG.....................................................................................................	24	1	1	36.00	36	9	0	7	0	12	2	6	0	0	0	0
.................................................................AGTGGCACTGGAAGAATTCACGGGC....................................................................................................	25	2	1	36.00	36	36	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGAACTGGAAGAATTCACGGGT....................................................................................................	25	2	1	36.00	36	0	0	0	0	1	35	0	0	0	0	0
.................................................................AATGCCACTGGAAGAATTCAC........................................................................................................	21	1	1	35.00	35	2	0	8	15	10	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTCAAG.......................................................................................................	22	1	1	35.00	35	2	0	5	3	20	0	1	4	0	0	0
.................................................................AATGGCACTGGAAAAATTCACGG......................................................................................................	23	1	1	34.00	34	21	6	4	2	0	0	0	1	0	0	0
.................................................................AATGGCACTGGAAGAATTCAG........................................................................................................	21	1	1	34.00	34	26	1	3	0	4	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGAATTAACG.......................................................................................................	22	1	1	33.00	33	1	4	6	7	10	2	2	1	0	0	0
.................................................................AATTGCAATGGAAGAATTCACGGG.....................................................................................................	24	2	1	33.00	33	33	0	0	0	0	0	0	0	0	0	0
.................................................................AAGGGCACTGGAAGAATTCACG.......................................................................................................	22	1	1	33.00	33	1	0	2	0	27	0	0	3	0	0	0
.................................................................AATGGCACTGGAAGAATTCGCG.......................................................................................................	22	1	1	33.00	33	3	4	9	1	13	0	0	3	0	0	0
................................................................CGATGGCACTGGAAGAATTCACGGG.....................................................................................................	25	2	1	32.00	32	32	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAGGAATTCAC........................................................................................................	21	1	1	32.00	32	3	2	16	0	9	0	0	2	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGGAAA..................................................................................................	27	2	1	32.00	32	2	1	0	20	2	7	0	0	0	0	0
..................................................................ATGGCACTGGAAGGATTCACGGG.....................................................................................................	23	1	1	32.00	32	1	0	0	0	0	31	0	0	0	0	0
.................................................................ATTGGCACTGGAAGAATTCACGGGT....................................................................................................	25	2	1	31.00	31	31	0	0	0	0	0	0	0	0	0	0
.................................................................AATGACACTGGAAGAATTCACG.......................................................................................................	22	1	1	31.00	31	8	0	7	0	15	0	0	1	0	0	0
.................................................................AATGGCACTGCAAGAATTCACGG......................................................................................................	23	1	1	31.00	31	14	1	9	5	2	0	0	0	0	0	0
.................................................................AATGGCACTGGACGAATTCACG.......................................................................................................	22	1	1	31.00	31	12	0	2	0	14	0	1	2	0	0	0
.................................................................TATGGCACTGGAAGAATTCACG.......................................................................................................	22	1	1	31.00	31	18	4	1	0	8	0	0	0	0	0	0
..................................................................ATGGCACTGGAAGAATTC..........................................................................................................	18	0	1	30.00	30	0	29	0	1	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGACTTCA.........................................................................................................	20	1	1	30.00	30	0	0	1	0	26	0	0	3	0	0	0
.................................................................AATTGCACTGGAAGAATTCACGGGC....................................................................................................	25	2	1	30.00	30	30	0	0	0	0	0	0	0	0	0	0
..................................................................ATGGCACTAGAAGAATTCACG.......................................................................................................	21	1	1	30.00	30	0	30	0	0	0	0	0	0	0	0	0
.................................................................AATGGCGCTGGAAGAATTCAC........................................................................................................	21	1	1	30.00	30	7	2	5	0	13	0	0	3	0	0	0
.................................................................AATGGCACTGGAAGAATTCATG.......................................................................................................	22	1	1	30.00	30	1	2	5	1	20	0	0	1	0	0	0
.................................................................AATGACACTGGAAGAATTCAC........................................................................................................	21	1	1	30.00	30	3	1	7	3	15	0	0	1	0	0	0
.................................................................AATGGCACTGCAAGAATTCACG.......................................................................................................	22	1	1	29.00	29	3	1	8	3	10	0	0	4	0	0	0
..................................................................ATGGCACTTGAAGAATTCACGGG.....................................................................................................	23	1	1	29.00	29	1	28	0	0	0	0	0	0	0	0	0
.......................................................................ACTGGAAGAATTCACGGG.....................................................................................................	18	0	1	29.00	29	1	11	1	2	2	11	0	1	0	0	0
.................................................................AATGGCACTGGAAGAATTCTC........................................................................................................	21	1	1	29.00	29	9	2	1	0	16	0	0	1	0	0	0
.................................................................AATGGCACTGGAAGAATTCC.........................................................................................................	20	1	1	29.00	29	0	0	3	2	22	0	0	2	0	0	0
.................................................................AATGGTACTGGAAGAATTCACG.......................................................................................................	22	1	1	29.00	29	7	2	8	3	7	0	1	1	0	0	0
.................................................................AATGGCACTGGAAGAATTTACG.......................................................................................................	22	1	1	27.00	27	8	2	5	0	9	0	1	2	0	0	0
.................................................................AATGGCACTGGAAGAATTCACGGAA....................................................................................................	25	2	1	27.00	27	12	1	0	13	1	0	0	0	0	0	0
.................................................................AATGGCACTTGAAGAATTCACG.......................................................................................................	22	1	1	27.00	27	9	4	6	0	6	0	0	2	0	0	0
.................................................................AATGGCACTGGACGAATTCACGTT.....................................................................................................	24	3	1	27.00	27	27	0	0	0	0	0	0	0	0	0	0
................................................................CAATGGCACTGGAAGAATTCAC........................................................................................................	22	1	1	27.00	27	11	4	6	0	5	0	0	1	0	0	0
.................................................................AATGGCATTGGAAGAATTCACGG......................................................................................................	23	1	1	27.00	27	14	1	5	5	0	1	1	0	0	0	0
.................................................................AATAGCACTGGAAGAATTCACG.......................................................................................................	22	1	1	27.00	27	4	3	6	3	4	0	1	6	0	0	0
.................................................................AATGGCAATGGAAGAATTCAC........................................................................................................	21	1	1	27.00	27	16	0	2	0	6	0	2	1	0	0	0
.................................................................AATGGCACTGGAAGCATTCACGGGT....................................................................................................	25	2	1	27.00	27	9	0	3	0	11	0	1	3	0	0	0
.................................................................AATGGCACTCGAAGAATTCACG.......................................................................................................	22	1	1	27.00	27	0	0	7	1	17	0	1	1	0	0	0
.................................................................AATTGCACTGGAAGCATTCACGGG.....................................................................................................	24	2	1	27.00	27	26	0	0	0	1	0	0	0	0	0	0
.................................................................AATGGCAATGGACGAATTCACGTG.....................................................................................................	24	3	1	26.00	26	26	0	0	0	0	0	0	0	0	0	0
.................................................................AGCGGCACTGGAAGAATTCACGGG.....................................................................................................	24	2	1	26.00	26	26	0	0	0	0	0	0	0	0	0	0
..................................................................ATGGCACTGGAAGAATTCACGGT.....................................................................................................	23	1	1	26.00	26	3	23	0	0	0	0	0	0	0	0	0
.................................................................AATAGCACTGGAAGAATTCAC........................................................................................................	21	1	1	26.00	26	7	2	8	2	2	0	0	5	0	0	0
.................................................................AATGGCACTGGAAAAATTCACG.......................................................................................................	22	1	1	26.00	26	5	2	7	2	5	0	0	5	0	0	0
....................................................................GGCACTGGAAGAATTCACGG......................................................................................................	20	0	1	26.00	26	2	15	5	0	4	0	0	0	0	0	0
..............................................................ATCAATGGCACTGGAAGAATTCACGGG.....................................................................................................	27	2	1	26.00	26	26	0	0	0	0	0	0	0	0	0	0
.................................................................AATGGCACTGGAAGGATTCAC........................................................................................................	21	1	1	26.00	26	0	2	7	2	12	0	1	2	0	0	0
.................................................................AATGGCACAGGAAGAATTCACGGGT....................................................................................................	25	2	1	26.00	26	0	25	0	0	0	1	0	0	0	0	0
.................................................................AATGGCACTGGAAGAGTTCACG.......................................................................................................	22	1	1	26.00	26	4	0	8	0	11	0	0	3	0	0	0
.................................................................AATGGGACTGGAAGAATTCACG.......................................................................................................	22	1	1	26.00	26	13	1	0	0	9	0	1	2	0	0	0
.................................................................AATGGCACTGGAAGAATTAAC........................................................................................................	21	1	1	26.00	26	6	0	2	6	11	1	0	0	0	0	0
.................................................................AATGGCACTGGGAGAATTCA.........................................................................................................	20	1	1	25.00	25	0	1	2	0	19	0	0	3	0	0	0
.................................................................AATGGCACCGGAAGAATTCA.........................................................................................................	20	1	1	25.00	25	0	13	8	0	3	0	1	0	0	0	0
..................................................................ATGGCACTAGAAGAATTCACGG......................................................................................................	22	1	1	25.00	25	0	25	0	0	0	0	0	0	0	0	0
.................................................................AATGGTACTGGAAGAATTCAC........................................................................................................	21	1	1	24.00	24	8	1	6	6	2	0	0	1	0	0	0
...........................................................................................................GTGATCTCTTAGTGGCATCTA..............................................................	21	0	1	24.00	24	10	13	0	1	0	0	0	0	0	0	0

TAAATTTCACTGTTTTGTTCTTTTCGTTTATATGGTCGACGACCATATATCTAGAGCCGTGTCAATTACCGTGACCTTCTTAAGTGCCCCATGAAAAATATGTTGGGCACTAGAGAATCACCGTAGATACCACGCTCTTATTTTGTAGGTTTACTTTGTTTTAGGTTTACTTAGATTCGACTTTTACACG *********************************************..(((((.(((.((..(((.((((((.(((..(((((((...............)))))))))).)))))).)))..)).)))))))).....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V058 head	M043 female body
.........................................................................................................................................TTAATTTGTAGGTTTTCTTT.................................	20	2	8	0.13	1	0	1
..........TGTATGGTCCTTTTCGTTTAT...............................................................................................................................................................	21	3	12	0.08	1	1	0
...................................TCGGCGACCATACCTCTAG........................................................................................................................................	19	3	20	0.05	1	1	0

Species	Coordinate	ID	Type	Alignment
droYak3	2L:8374784-8374973 -	dya-mir-263a	Known_mirbase	ATTTAA------------------AGTGA-----CAAAACA------------AGAAAAGCAAATATACC---AGCTGC-TG----GT-----ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAA---TGAAACAAAATCCAAATGAATCTA-AGCT-GAAAATGTGC--------------------------------------------
droEre2	scaffold_4929:13456400-13456589 +	der-mir-263a	Known_mirbase	ATTAAA------------------AGTGA-----TACAACA------------AAAAAAGTAAATATGCC---ATCTGA-TG----GT-----GTATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTGA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCGAA---TGAAACGAAATCCAAAGCAATCAA-AGTT-AAAAATGTGC--------------------------------------------
droSec2	scaffold_16:152650-152832 -	dse-mir-263a	Known_mirbase	ATTTAA------------------AGTGA-----CAAAACA------------AGGA--------ATACC---TTCTAA-TG----GT-----ATATAGATCTCGACACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAG--TGAAACGAAATCCGAAACAATCAA-AGTT-AAAAATGTGC--------------------------------------------
droSim2	2l:11624675-11624865 -	dsi-mir-263a	Known_mirbase	ATTTAA------------------AGTGA-----CAAAAGA------------AGAAAAGAAAATATACC---ATCTAA-TG----GT-----ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAA--TGAAACGAAATCCAAAACAATCAA-AGTT-AAAAACGTGC--------------------------------------------
dm3	chr2L:11953361-11953551 -	dme-mir-263a	Known_mirbase	ATTTAA------------------ACTGA-----CAAAACA------------AGAAAAGTAAATATACC---ATCTAA-TG----GT-----ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAA--TGAAACGAAATCCGAAACTTTCAA-AGTT-AAAAATGTGC--------------------------------------------
droEug1	scf7180000409122:345816-345982 -			ATCTAA------------------AGTGAA-------------------ATCAAAG-AAGAAGTTGC---AGAATCTT-GTGAAGTGT-----TCAATCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACATCCAAA----------------------------AGTT-GAAAAAGTAT--------------------------------------------
droBia1	scf7180000302422:1067934-1068109 +			AAGTAA------------------AGTGAAAAAT-------AAAGTGA----------------TAT-------GC-GA-TGAA--GT----------AATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTGATTT-TA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAACAAAACAACCACA---TGAAGCAAAATTCAAATCAACCTA-TGGGTAAAAATGTGT--------------------------------------------
droTak1	scf7180000415863:297037-297194 +			TCATAA------------------AGTGAA-------------------AACAAAG-AACAAGATTT---TC-----AA-TC--GTGT----------AATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATTTATGGTGCGGGAATAAAACATCAAAA---AGTTACA-----------------------AAAAATGTGT--------------------------------------------
droEle1	scf7180000491028:3218976-3219150 +			AAATAA------------------AGTGAA-------------------GTCAAAA-TATAAAATAC---TAGTTCTT-G-AAAGTGT-----AACTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTCA--TACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAAACATCAAAA---T----------------CAATCAATGGTT-ATAAATGTGT--------------------------------------------
droRho1	scf7180000779410:469649-469843 -			AATTAA------------------AGTGAA--------------GTGAATCCAAAG-AATGAGATGC---TCAATCTT-T-AAAGTGT-----TACTACATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAAACATCCAAA---TGAACAAAGATTCAAGTCAATCAAAAGTT--AAAACGTGT--------------------------------------------
droFic1	scf7180000453936:232018-232191 +			AATTAT------------------AGTGAA-------------------ACCAAAG-AGCAAGATAT---ATAATCTT-GACAA--GT-----CACTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAGACATCAAAT----CA---------------AATCAAAAGCT-AAGAATGTGA--------------------------------------------
droKik1	scf7180000301476:605740-605920 +			TGAAAT------------------TGT--------AAGACA------------AGA--------TCT---AAGATCTT-GCAGAGTGT-----TAAACCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTCTA--AACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATTGAACATCCAATC--AGAATCAAAATCAAAATCA----AAAGTT-ATAAATGTGT--------------------------------------------
droAna3	scaffold_12943:2289681-2289857 +	dan-mir-263a	Known_mirbase	GT---A------------------AGTGGAAAA--------AAAGTGAAA-------------------------------CAA--GT-----TTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACATCAAAAAAGTGAACAAAAA-------A---CT----CTGA--AAAGTGTGAA---------------------------ACTCTGAATATTTC
droBip1	scf7180000396728:1008460-1008621 -			AAATGA------------------A----------------AAAGTGAAA-------------------------------AAAATGT-----TTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACATCAAAAGAGTGAA-----TACAAAAAAAACCAA-TG-----AAAAGTGT--------------------------------------------
dp5	4_group3:7322744-7322936 +	dps-mir-263a	Known_mirbase	AGTTAAATCAAAACTAGTCACAAAAGTGAAATAA-------GAAGTGAAA-----------------------AACTC-A-TAAGTGT-----ATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CATCTCAA---TCAATCTCAATCG----CAACCAA-CGTTGATAATTGTGT--------------------------------------------
droPer2	scaffold_1:8768237-8768429 +	dpe-mir-263a	Known_mirbase	AGTTAAATCAAAACTAGTCACAAAAGTGAAATAA-------GAAGTGAAA-----------------------AACTC-A-TAAGTGT-----ATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CATCTCAA---TCAATCCCAATCG----CAACCAA-CGTTGATAATTGTGT--------------------------------------------
droWil2	scf2_1100000004521:2657678-2657836 -	dwi-mir-263a	Known_mirbase	A---------------------------------------------------------------------------------------------------TCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATTTAACAC-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTTAAGCATACAGA---ACATCCGACATC----------------------AAGTGTTAATTGTATATATATATATAATTTTTGTGATTTTTGAA-----C
droVir3	scaffold_12963:13235058-13235196 +	dvi-mir-263a	Known_mirbase	GTTCGT------------------ACCTG-----TAGAACA------------GGCAAGTTACATCTGCT---T---AA-TG----TTGCTTGCTCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------------------------
droMoj3	scaffold_6500:16780692-16780834 +	dmo-mir-263a	Known_mirbase	AGCGAG------------------A-AGA-----CC-AGCA-------------GGTGAGTAAGTTTGTT---TTC-GT------TGT-----TT-CGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTC-TA-ACAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATTACGTTCAA----------------------------------------------------------------------------------------
droGri2	scaffold_15126:6621373-6621458 -	dgr-mir-263a	Known_mirbase	A---------------------------------------------------------------------------------------------------TCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTTAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droYak3

ATTTAA------------------AGTGA-----CAAAACA------------AGAAAAGCAAATATACC---AGCTGC-TG----GT-----ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAA---TGAAACAAAATCCAAATGAATCTA-AGCT-GAAAATGTGC--------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	377530.00	377530	25256	24924	272623	14022	1470	4935	17384	95	175	494	16152
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	71261.00	71261	10242	13923	33409	718	551	1734	10218	34	63	159	210
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	40422.00	40422	2532	9506	4276	603	2087	7087	14271	2	1	6	51
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	27696.00	27696	1600	4028	4937	428	1466	5342	9886	0	1	0	8
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	9776.00	9776	323	1213	3531	163	139	485	2098	6	7	43	1768
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	9711.00	9711	143	1716	160	48	767	2622	4254	0	0	1	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	5457.00	5457	1574	427	2517	62	61	144	411	3	3	16	239
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	3793.00	3793	19	2588	356	11	0	2	18	0	0	0	799
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	2385.00	2385	851	195	3	2	139	489	702	0	0	1	3
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	2334.00	2334	130	124	1854	169	9	15	28	0	1	4	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	2189.00	2189	47	21	1986	16	10	18	81	0	0	0	10
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	1553.00	1553	17	1483	35	1	2	2	12	0	1	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	1391.00	1391	11	215	614	14	25	138	318	6	4	8	38
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	1246.00	1246	50	11	1138	11	0	6	19	0	0	0	11
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	1042.00	1042	3	1007	5	1	3	2	21	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	589.00	589	21	114	131	4	33	119	165	0	0	2	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	440.00	440	25	81	241	4	5	15	38	0	0	1	30
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	430.00	430	0	416	3	1	0	4	6	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	378.00	378	213	12	127	6	1	2	11	0	0	0	6
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	308.00	308	26	21	205	31	7	4	14	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	293.00	293	14	44	13	2	19	85	116	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	255.00	255	193	12	33	0	1	1	5	0	0	0	10
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	250.00	250	12	2	173	1	2	15	44	1	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	224.00	224	4	34	5	1	17	67	96	0	0	0	0
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	205.00	205	2	139	29	0	0	0	6	0	0	0	29
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	189.00	189	0	183	0	0	2	0	4	0	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	133.00	133	2	103	6	0	3	0	3	0	0	0	16
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	114.00	114	9	30	24	0	9	11	31	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGAC........................................................................................................................................................	24	1	113.00	113	1	0	104	2	0	1	5	0	0	0	0
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	107.00	107	1	96	4	0	0	0	5	0	0	0	1
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	107.00	107	2	24	13	0	20	35	13	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	94.00	94	3	15	18	0	5	11	40	1	1	0	0
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	91.00	91	28	25	7	0	0	0	11	0	0	0	20
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	85.00	85	5	4	16	0	2	26	32	0	0	0	0
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	82.00	82	1	34	27	2	0	2	7	0	0	0	9
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	75.00	75	0	70	0	0	0	1	4	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	74.00	74	11	13	7	4	7	18	14	0	0	0	0
............................................................................................................................................................CGTGATCTCTTAGTGGCATC.................................................................................................................	20	1	67.00	67	5	2	58	2	0	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	60.00	60	1	0	31	1	7	16	4	0	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	58.00	58	1	54	1	0	0	0	1	0	0	0	1
............................................................................................................................................................CGTGATCTCTTAGTGGCATCC................................................................................................................	21	1	47.00	47	1	0	46	0	0	0	0	0	0	0	0
................................................................................................................TAATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	25	1	46.00	46	0	36	10	0	0	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTA......................................................................................................................................................	26	1	46.00	46	15	6	10	1	1	1	12	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGTT........................................................................................................................................................	24	1	46.00	46	2	1	8	2	3	9	21	0	0	0	0
......................................................................................................................CACTGGAAGAATTCACGGG........................................................................................................................................................	19	1	37.00	37	6	0	6	3	0	0	7	0	0	0	15
.................................................................................................................AATGGCACTGGAAGAATTCAG...........................................................................................................................................................	21	1	34.00	34	0	1	26	0	0	4	3	0	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTC.............................................................................................................................................................	18	1	30.00	30	1	29	0	0	0	0	0	0	0	0	0
.......................................................................................................................ACTGGAAGAATTCACGGG........................................................................................................................................................	18	1	29.00	29	2	11	1	0	1	2	1	0	0	0	11
.................................................................................................................AATGGCACTGGAAGAATTCC............................................................................................................................................................	20	1	29.00	29	2	0	0	0	2	22	3	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGAA.......................................................................................................................................................	25	1	27.00	27	13	1	12	0	0	1	0	0	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	23	1	26.00	26	0	23	3	0	0	0	0	0	0	0	0
....................................................................................................................GGCACTGGAAGAATTCACGG.........................................................................................................................................................	20	1	26.00	26	0	15	2	0	0	4	5	0	0	0	0
.............................................................................................................................................................GTGATCTCTTAGTGGCATCTA...............................................................................................................	21	1	24.00	24	1	13	10	0	0	0	0	0	0	0	0

droEre2

ATTAAA------------------AGTGA-----TACAACA------------AAAAAAGTAAATATGCC---ATCTGA-TG----GT-----GTATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTGA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCGAA---TGAAACGAAATCCAAAGCAATCAA-AGTT-AAAAATGTGC--------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	242187.00	242187	50937	22876	2374	9651	94139	45551	16659
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	109673.00	109673	32773	4970	1311	1044	46092	19931	3552
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	100786.00	100786	21681	801	3090	853	50389	23873	99
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	58132.00	58132	4575	846	1528	792	25274	25109	8
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	24590.00	24590	1972	10	758	124	12279	9443	4
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	16222.00	16222	1703	283	166	140	9041	3913	976
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	6118.00	6118	174	4	89	12	2913	2924	2
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	5642.00	5642	829	301	73	67	2728	1425	219
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	5570.00	5570	5166	44	2	3	136	83	136
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	3556.00	3556	3417	9	4	1	51	35	39
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	2918.00	2918	588	49	70	101	1269	761	80
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	2461.00	2461	2370	0	3	1	53	34	0
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	1850.00	1850	259	22	34	19	822	693	1
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	728.00	728	54	0	24	10	266	374	0
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	707.00	707	64	4	30	7	323	279	0
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	692.00	692	130	147	16	93	203	103	0
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	519.00	519	459	1	1	1	25	32	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	504.00	504	98	156	8	30	110	61	41
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	486.00	486	96	24	8	17	195	116	30
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	370.00	370	80	4	6	1	79	197	3
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	357.00	357	60	91	2	20	78	59	47
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	343.00	343	304	2	0	5	7	3	22
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	305.00	305	41	1	2	2	74	185	0
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	293.00	293	23	14	6	2	31	214	3
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	275.00	275	37	3	5	0	149	80	1
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	219.00	219	201	0	0	0	7	11	0
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	209.00	209	201	0	2	1	1	4	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	184.00	184	161	2	0	0	14	7	0
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	163.00	163	8	1	9	2	56	87	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	150.00	150	37	10	2	3	64	32	2
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	149.00	149	140	0	1	0	8	0	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	103.00	103	92	0	0	0	6	5	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	102.00	102	22	1	3	0	46	30	0
.................................................................................................................AATGGCACTGGAAGAATTCACGTT........................................................................................................................................................	24	1	102.00	102	5	0	2	6	47	42	0
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	92.00	92	19	11	2	16	29	15	0
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	91.00	91	41	2	0	7	20	5	16
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	77.00	77	10	2	5	5	31	24	0
....................................................................................................................GGCACTGGAAGAATTCACGG.........................................................................................................................................................	20	1	55.00	55	38	0	0	0	14	3	0
.................................................................................................................AATGGCACTGGAAGAATTT.............................................................................................................................................................	19	2	55.00	110	5	0	2	0	67	36	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGTA.......................................................................................................................................................	25	1	54.00	54	3	0	1	0	25	24	1
..................................................................................................................ATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	23	1	53.00	53	48	0	0	2	1	2	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTA......................................................................................................................................................	26	1	52.00	52	12	0	1	0	30	9	0
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	48.00	48	4	3	3	0	20	18	0
................................................................................................................TAATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	25	1	47.00	47	42	3	0	0	0	2	0
.................................................................................................................AATGGCACTGGAAGAATTCT............................................................................................................................................................	20	1	45.00	45	7	0	3	1	25	9	0
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	43.00	43	24	0	0	2	11	5	1
.......................................................................................................................ACTGGAAGAATTCACGGG........................................................................................................................................................	18	1	43.00	43	8	0	1	3	20	11	0
.................................................................................................................AATGGCACTGGAAGAATTCAG...........................................................................................................................................................	21	1	34.00	34	23	1	1	0	6	3	0
..................................................................................................................ATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	22	1	33.00	33	30	0	0	0	2	1	0
....................................................................................................................GGCACTGGAAGAATTCACG..........................................................................................................................................................	19	1	30.00	30	14	0	0	0	14	2	0
.................................................................................................................AATGGCACTGGAAGAATTCACGCT........................................................................................................................................................	24	1	29.00	29	0	0	0	13	6	10	0

droSec2

ATTTAA------------------AGTGA-----CAAAACA------------AGGA--------ATACC---TTCTAA-TG----GT-----ATATAGATCTCGACACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAG--TGAAACGAAATCCGAAACAATCAA-AGTT-AAAAATGTGC--------------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	268160.00	268160	47524	81722	109279	29635
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	99540.00	99540	16734	51851	8490	22465
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	96294.00	96294	23365	47534	11102	14293
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	64138.00	64138	4683	32658	3468	23329
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	27898.00	27898	2020	14597	622	10659
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	17352.00	17352	1507	10752	2011	3082
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	7294.00	7294	224	2516	64	4490
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	5472.00	5472	4782	129	498	63
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	5056.00	5056	539	2375	1043	1099
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	2652.00	2652	517	1493	146	496
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	2597.00	2597	2444	59	50	44
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	1921.00	1921	1805	43	33	40
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	1276.00	1276	158	726	9	383
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	1063.00	1063	93	81	843	46
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	715.00	715	59	354	20	282
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	558.00	558	495	18	17	28
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	490.00	490	79	161	196	54
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	443.00	443	74	204	95	70
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	436.00	436	79	207	109	41
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	432.00	432	45	234	5	148
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	389.00	389	33	286	2	68
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	378.00	378	37	25	12	304
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	295.00	295	271	4	15	5
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	234.00	234	45	95	6	88
.................................................................................................................AATGGCACTGGAAGAATTT.............................................................................................................................................................	19	1	220.00	220	12	118	0	90
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	197.00	197	176	5	2	14
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	190.00	190	143	18	17	12
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	178.00	178	27	28	104	19
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	147.00	147	139	7	1	0
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	136.00	136	22	83	8	23
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	133.00	133	7	51	2	73
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	125.00	125	107	13	1	4
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	116.00	116	12	80	12	12
.................................................................................................................AATGGCACTGGAAGAATTCACGTT........................................................................................................................................................	24	1	109.00	109	7	64	1	37
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	100.00	100	28	42	16	14
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	72.00	72	49	11	11	1
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	72.00	72	61	0	7	4
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	71.00	71	10	37	7	17
.................................................................................................................AATGGCACTGGAAGAATTCT............................................................................................................................................................	20	1	68.00	68	5	42	0	21
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	66.00	66	5	28	6	27
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTA......................................................................................................................................................	26	1	57.00	57	4	37	4	12
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	50.00	50	26	3	15	6
...................................................................................................................TGGCACTGGAAGAATTCAC...........................................................................................................................................................	19	1	46.00	46	40	3	2	1
....................................................................................................................GGCACTGGAAGAATTCACG..........................................................................................................................................................	19	1	36.00	36	24	6	2	4
.................................................................................................................AATGGCACTGGAAGAATTCACGGTA.......................................................................................................................................................	25	1	34.00	34	5	19	1	9
..................................................................................................................ATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	23	1	34.00	34	31	1	0	2
..................................................................................................................ATGGCACTGGAAGAATTC.............................................................................................................................................................	18	1	31.00	31	25	1	0	5
................................................................................................................TAATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	25	1	30.00	30	30	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCC............................................................................................................................................................	20	1	27.00	27	0	13	1	13
....................................................................................................................GGCACTGGAAGAATTCACGG.........................................................................................................................................................	20	1	26.00	26	18	6	1	1
.................................................................................................................AATGGCACTGGAAGAATTTT............................................................................................................................................................	20	1	26.00	26	1	16	0	9

droSim2

ATTTAA------------------AGTGA-----CAAAAGA------------AGAAAAGAAAATATACC---ATCTAA-TG----GT-----ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAA--TGAAACGAAATCCAAAACAATCAA-AGTT-AAAAACGTGC--------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	1145961.00	1145961	130809	132054	129533	7202	693	639	282288	317442	20246	13442	34833	24604	13231	37155	244	415	1131
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	429731.00	429731	63939	42585	10634	4191	1119	979	116260	141937	7636	5057	13152	1977	4616	15206	70	112	261
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	222375.00	222375	12884	5475	1104	2215	1653	2166	78272	94614	5353	3808	12782	1516	49	471	0	5	8
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	163389.00	163389	8852	1897	732	608	2377	3750	61263	71445	2991	2488	4730	1804	31	417	1	1	2
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	34397.00	34397	1709	1338	193	254	0	0	13820	13903	702	487	421	318	129	1024	15	27	57
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	31889.00	31889	11636	6438	2578	180	0	0	3514	5261	576	389	258	154	184	676	8	11	26
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	28841.00	28841	1032	301	31	308	1119	1154	10408	12466	548	386	853	151	3	78	0	3	0
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	19127.00	19127	9501	2565	74	37	915	952	2064	2076	99	62	720	24	4	30	1	1	2
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	4882.00	4882	106	41	4	9	1618	1424	420	349	23	12	875	1	0	0	0	0	0
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	4056.00	4056	358	102	3089	10	44	27	71	34	0	2	74	150	22	68	2	0	3
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	3025.00	3025	1284	953	486	5	78	100	50	47	4	1	9	3	0	4	0	0	1
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	2831.00	2831	146	106	31	54	0	0	979	1081	55	31	70	20	51	184	1	3	19
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	2383.00	2383	1146	685	235	5	0	0	57	131	39	55	4	1	7	18	0	0	0
.................................................................................................................AATGGCACTGGAAGAAT...............................................................................................................................................................	17	1	2358.00	2358	0	0	0	0	0	0	226	219	6	7	1899	0	0	1	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	2153.00	2153	180	193	121	726	7	2	289	479	16	16	59	19	8	37	0	1	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	1698.00	1698	240	138	35	5	0	0	436	474	15	22	313	17	0	1	1	1	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	1372.00	1372	232	188	102	18	0	0	238	244	28	15	124	9	36	137	1	0	0
.................................................................................................................AATGGCACTGGAAGA.................................................................................................................................................................	15	2	1200.50	2401	0	0	0	0	0	0	58	111	1	7	2224	0	0	0	0	0	0
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	1113.00	1113	180	160	212	8	1	1	13	22	1	12	500	3	0	0	0	0	0
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	1045.00	1045	156	37	455	2	5	8	184	133	3	4	26	31	0	0	1	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	1016.00	1016	227	205	175	8	0	0	80	110	31	16	128	27	3	5	0	1	0
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	939.00	939	111	44	1	16	0	0	283	410	15	4	45	1	1	6	0	0	2
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	920.00	920	135	83	3	417	1	2	98	142	5	4	14	0	5	11	0	0	0
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	836.00	836	8	9	14	6	3	0	1	3	0	1	786	4	0	1	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	635.00	635	77	22	4	9	0	0	147	234	43	44	46	6	0	3	0	0	0
....................................................................................................................GGCACTGGAAGAATTCACGG.........................................................................................................................................................	20	1	559.00	559	10	2	0	7	3	3	0	1	1	1	530	1	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	526.00	526	95	49	1	25	0	0	109	179	19	8	30	3	2	6	0	0	0
....................................................................................................................GGCACTGGAAGAATTCACG..........................................................................................................................................................	19	1	375.00	375	1	0	0	1	2	1	2	1	0	0	367	0	0	0	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	375.00	375	18	1	0	223	4	1	29	76	3	2	15	2	0	1	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	364.00	364	55	8	5	9	0	0	58	110	49	52	6	12	0	0	0	0	0
.....................................................................................................................GCACTGGAAGAATTCACGG.........................................................................................................................................................	19	1	355.00	355	73	56	20	1	1	2	4	6	1	1	190	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGAA.......................................................................................................................................................	25	1	339.00	339	193	76	7	2	0	0	9	28	9	3	0	0	2	10	0	0	0
.......................................................................................................................ACTGGAAGAATTCACGGG........................................................................................................................................................	18	1	333.00	333	15	16	12	4	0	0	9	5	1	5	262	4	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	317.00	317	82	44	7	3	0	0	65	68	9	5	30	4	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	251.00	251	37	11	0	5	0	0	56	126	1	2	7	3	0	3	0	0	0
.....................................................................................................................GCACTGGAAGAATTCACG..........................................................................................................................................................	18	1	191.00	191	11	2	3	1	0	1	6	14	3	3	147	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTA......................................................................................................................................................	26	1	187.00	187	53	29	9	1	0	0	12	52	6	4	1	0	2	18	0	0	0
......................................................................................................................CACTGGAAGAATTCACGGG........................................................................................................................................................	19	1	186.00	186	35	48	48	1	0	0	8	16	4	3	20	3	0	0	0	0	0
....................................................................................................................GGCACTGGAAGAATTCAC...........................................................................................................................................................	18	1	175.00	175	0	0	0	1	5	2	0	0	0	1	165	1	0	0	0	0	0
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	171.00	171	19	13	9	38	0	1	16	54	3	2	15	0	0	1	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	155.00	155	11	2	1	56	2	5	15	57	1	0	3	1	0	1	0	0	0
............................................................................................................................................................CGTGATCTCTTAGTGGCATC.................................................................................................................	20	1	153.00	153	70	12	49	0	8	4	7	1	0	0	1	1	0	0	0	0	0
......................................................................................................................CACTGGAAGAATTCACGG.........................................................................................................................................................	18	1	140.00	140	38	43	13	1	0	0	17	14	6	0	8	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAA................................................................................................................................................................	16	2	128.00	256	0	0	0	0	0	0	30	52	0	0	174	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCAG...........................................................................................................................................................	21	1	122.00	122	2	1	0	1	0	0	57	55	0	0	4	2	0	0	0	0	0
........................................................................................................................CTGGAAGAATTCACGGG........................................................................................................................................................	17	1	116.00	116	0	0	0	0	0	0	12	22	3	4	75	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	107.00	107	13	10	0	1	0	0	20	29	1	0	2	1	0	29	0	0	1
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	102.00	102	3	0	0	1	0	0	26	62	1	2	5	1	0	1	0	0	0
.......................................................................................................................ACTGGAAGAATTCACGG.........................................................................................................................................................	17	1	97.00	97	0	0	0	0	0	0	2	1	1	1	92	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	78.00	78	7	3	2	0	0	0	16	31	5	1	12	1	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAC......................................................................................................................................................	26	1	76.00	76	40	13	2	0	0	0	5	13	2	0	1	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGGT......................................................................................................................................................	26	1	76.00	76	4	4	1	1	14	18	16	15	0	1	1	1	0	0	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	74.00	74	4	2	0	20	0	0	18	28	0	0	1	0	1	0	0	0	0
.......................................................................................................................ACTGGAAGAATTCACG..........................................................................................................................................................	16	1	72.00	72	0	0	0	0	0	0	0	0	1	0	71	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGTA.......................................................................................................................................................	25	1	68.00	68	6	3	1	3	0	0	13	29	2	1	2	0	0	8	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	65.00	65	14	13	3	22	0	0	2	8	0	1	1	0	0	1	0	0	0
.....................................................................................................................GCACTGGAAGAATTCAC...........................................................................................................................................................	17	1	63.00	63	0	0	0	0	0	0	4	5	0	2	52	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTAT.....................................................................................................................................................	27	1	60.00	60	11	14	4	0	0	0	3	13	2	3	0	0	3	7	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	57.00	57	5	0	0	31	1	2	6	10	0	0	2	0	0	0	0	0	0
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	55.00	55	5	2	0	25	0	1	2	15	0	0	3	1	1	0	0	0	0
............................................................................................................................................................CGTGATCTCTTAGTGGCA...................................................................................................................	18	1	50.00	50	11	2	10	0	9	6	2	1	0	0	7	1	0	0	0	0	1
......................................................................................................................CACTGGAAGAATTCACG..........................................................................................................................................................	17	1	48.00	48	0	0	0	0	0	0	18	12	4	0	14	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAAT.....................................................................................................................................................	27	1	47.00	47	14	22	0	0	0	0	1	8	2	0	0	0	0	0	0	0	0
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	47.00	47	3	1	0	25	1	1	1	8	1	0	6	0	0	0	0	0	0
........................................................................................................................CTGGAAGAATTCACGG.........................................................................................................................................................	16	1	44.00	44	0	0	0	0	0	0	2	2	3	2	35	0	0	0	0	0	0
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTAA..............................................................................................................	23	1	40.00	40	3	1	27	1	0	0	4	1	0	0	0	2	1	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACAA.........................................................................................................................................................	23	1	39.00	39	3	0	0	0	0	0	6	19	3	8	0	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAG......................................................................................................................................................	26	1	38.00	38	16	13	4	1	0	0	2	1	0	0	1	0	0	0	0	0	0
.....................................................................................................................GCACTGGAAGAATTCACGGGA.......................................................................................................................................................	21	1	37.00	37	16	12	6	0	0	0	0	0	0	0	3	0	0	0	0	0	0

dm3

ATTTAA------------------ACTGA-----CAAAACA------------AGAAAAGTAAATATACC---ATCTAA-TG----GT-----ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAA--TGAAACGAAATCCGAAACTTTCAA-AGTT-AAAAATGTGC--------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	3967193.00	3967193	7	1	1	0	79	85	2	17	164	227	86	53	135	4	44	56	44	10	7	0	1907	1369	1161	0	0	52	23	1297	522	2180	1967	1826	104	122	4	4449	6804	3544	3434	4364	1241	3102	7135	5778	1029	7397	11322	4176	5111	4696	9917	8523	1371	20	1	0	1357	658	116	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	17	11	22	40	206	70	2382	2612	13	27	1	374	448	1705	113	471	474	603	1109	1709	133	35	2175	3129	1443	81	41	54	99	10	36	84	211	201	470	331	8	350	112	2097	1272	23	370	3	609	540	2544	41	146	17	124	162	367	358	340	390	997	609	523	655	809	787	115	394	1325	2069	265	7968	22665	14769	21589	10898	4514	17612	15717	15261	7516	2098	75	123	9	32	553	60	204	463	176	210	6819	4824	0	4877	2998	1499	1530	2329	2603	2265	640	8551	20833	4834	3865	392	278	101	1377	18	3311	16211	2596	26174	7075	4720	34	73	4764	525	37604	3998	1104	596	314	889	594	8748	8765	123	211	593	186	142	102	1164	1118	504	62342	20011	14941	22147	100260	35545	69574	76464	84451	103378	77830	30604	3139	1488	1650	1843	19	40	0	0	13849	8504	13	5905	4193	458	5	12	26	6896	6768	116	7304	0	3	37	4	31	4807	2	65	0	8	2	14	2	1	7	1	48	41	9	138	138	24971	170126	22565	136305	35183	256870	14150	95007	387	2566	8	2	69	32471	22679	19324	24416	35825	64235	18031	7759	193	7210	9543	35290	33789	129467	38433	44	52010	42444	841	4047	86841	144185	223974	270	65	218	6	4	18	2821	672	289	167	37	143021	283243	120721	49232	73323	130557	97628	31	4145	45	47	9114	1257
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	1719414.00	1719414	1	0	0	0	56	51	0	3	16	53	51	32	58	1	16	19	5	0	2	0	705	406	334	1	0	23	107	11	5	0	0	0	0	0	2	890	945	940	675	910	200	611	747	1328	262	2226	1554	1013	943	926	1636	2119	244	0	58	0	850	697	103	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	27	14	23	35	65	5	290	169	7	18	2	260	182	1161	82	104	207	356	320	877	21	1	343	376	614	84	31	34	57	8	27	63	17	42	24	29	4	232	38	844	415	20	271	7	177	184	819	15	54	5	50	63	72	121	71	105	346	255	172	196	467	134	33	120	175	183	148	3174	5531	4822	5214	3243	1354	5250	3793	3747	2428	3579	42	258	2	19	168	39	46	161	2	88	2664	3734	0	1781	118	225	999	977	552	997	124	3835	4147	3568	884	96	37	10	460	31	2582	13266	1539	15654	3178	369	9	49	3743	334	29063	4388	521	402	139	462	324	3108	4694	29	41	239	60	18	14	342	308	155	19280	4939	8995	11079	44915	13899	25340	26250	38262	36203	28610	13232	1327	932	649	911	79	45	0	0	1528	1156	4	243	959	86	1	3	8	2250	2195	22	2194	0	0	3	1	2	1138	0	18	0	2	1	5	3	0	1	0	6	11	4	26	29	21649	151383	17590	108078	23845	182031	7145	49688	128	962	6	0	34	14500	10255	7746	9856	3329	8935	7930	3625	63	3472	950	9550	4701	45145	6971	5	10059	8421	101	1663	31513	50277	66257	154	32	56	0	1	14	437	209	93	142	17	50291	127317	54077	16510	27507	62101	34097	11	1525	33	18	2983	234
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	1524050.00	1524050	0	0	0	0	132	58	0	1	7	55	59	20	78	1	15	0	6	64	15	0	616	381	523	151	0	44	150	84	50	209	1960	1717	15	17	2	648	1036	791	603	798	256	2065	2902	879	314	1309	1753	684	1859	2586	5928	1401	284	0	13	0	649	803	132	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	32	11	30	101	58	0	157	145	7	6	0	577	187	1468	309	128	125	569	471	1359	23	11	1239	2342	3248	149	20	21	50	0	28	93	95	75	47	96	5	376	49	1146	771	15	289	3	520	429	1818	33	224	7	165	243	7	11	74	89	224	118	106	82	230	21	68	161	184	132	97	3766	5243	6378	5526	5050	3334	3166	2422	3391	1717	1672	44	97	9	14	97	42	56	122	40	58	5054	5397	0	4291	201	96	1633	2075	238	2162	63	5106	1132	8948	263	62	13	15	348	16	4561	5998	1705	16300	2962	106	17	6	5853	160	27062	6109	89	35	32	63	38	1538	3750	32	17	161	42	11	46	137	207	84	10146	5738	12637	8030	19905	9726	11011	13740	17542	21507	12843	7868	320	59	61	380	45	17	0	0	2161	1386	2	2599	2846	227	0	2	15	3511	3852	19	3304	0	1	10	2	10	2546	0	6	0	4	0	7	0	2	6	2	21	14	5	30	30	17596	123815	17554	106579	21188	159191	5175	35747	74	722	12	1	69	21994	22782	15219	18243	2191	10699	14870	7579	76	6259	3958	13920	8445	30408	23670	23	26931	29470	9	619	21600	34168	48369	52	27	21	2	3	7	251	85	68	36	7	41627	86991	45060	19063	26793	36935	29120	28	686	21	7	2020	121
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	1151484.00	1151484	0	0	0	0	88	15	0	0	2	20	17	6	19	0	11	1	0	31	8	0	217	281	227	46	0	52	104	16	48	47	1316	1319	14	7	0	271	279	350	316	237	140	590	309	586	212	543	434	447	596	768	859	801	154	32	22	0	472	556	71	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	21	16	14	86	15	0	25	48	2	8	0	177	78	330	219	60	50	1152	282	650	24	11	353	947	1633	82	3	9	26	22	15	19	70	31	20	32	1	164	23	836	255	13	108	1	226	180	665	16	241	14	102	241	1	3	50	49	56	26	35	24	97	5	62	77	72	101	36	1034	2601	2139	2202	1249	2244	2706	1801	1689	1047	1233	42	68	11	14	111	18	46	55	65	35	4046	4874	0	3033	33	16	995	1516	57	1441	51	4255	132	7644	119	102	3	19	296	8	2977	3035	993	7727	1195	34	0	1	3424	56	9272	825	36	67	16	48	28	588	1268	15	4	146	29	6	16	92	61	69	2826	2035	8107	6273	8371	5458	4099	7064	9671	9514	5259	3745	53	4	2	230	107	6	0	0	1268	1173	2	1859	4877	208	2	1	10	2703	2764	10	2578	0	0	2	3	4	5789	0	4	0	1	0	6	0	0	1	5	14	7	4	22	26	10207	71814	12405	79009	14567	111009	3333	23574	33	553	9	0	73	26888	24778	17033	20675	1507	12405	12423	6340	49	5895	1655	5939	8141	28906	23284	15	23491	21133	16	468	18996	19766	29190	43	65	23	0	3	3	312	72	41	16	12	44898	117120	52777	12420	18851	38692	27888	60	765	16	3	1283	13
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	387820.00	387820	0	0	0	0	44	14	0	0	1	1	4	0	2	0	2	1	0	7	3	0	42	61	104	19	0	20	86	20	23	43	716	665	5	10	194	46	82	72	54	56	29	173	246	53	87	79	140	53	153	180	358	82	41	20	0	0	272	278	38	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	5	6	6	45	9	0	4	16	1	2	0	76	24	151	92	24	7	409	113	235	3	3	130	205	866	38	9	5	16	3	9	18	20	4	6	2	0	73	16	402	229	2	99	0	242	95	216	4	143	2	78	134	3	7	58	75	5	0	6	15	20	8	10	19	14	14	7	438	385	718	293	493	962	238	227	235	114	160	10	22	4	5	36	11	24	18	10	13	1859	2989	0	1226	44	26	538	793	53	810	28	1995	212	3728	79	34	2	35	65	5	1690	763	247	1913	328	11	0	0	849	1	1846	230	2	5	3	3	1	59	184	16	1	87	11	0	1	41	68	30	451	872	2540	1404	655	704	383	704	704	1569	388	428	47	4	9	135	35	5	0	0	171	138	1	959	2061	114	1	0	9	1706	1996	6	1745	0	1	2	5	3	1994	0	3	0	0	0	2	0	1	0	2	1	4	1	8	11	2536	17941	2998	18569	3118	24103	460	3239	28	232	1	0	42	14841	13427	12072	14962	302	1597	6267	3555	21	4975	591	2081	1174	3922	12525	7	12153	11925	14	163	3188	3737	7573	16	14	2	1	0	0	22	18	12	2	4	17749	44930	19301	7164	9886	11595	13374	22	278	9	2	519	9
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.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	169830.00	169830	0	0	0	0	6	4	0	1	0	3	2	0	2	0	2	2	0	0	0	0	19	13	22	0	0	1	0	0	0	0	0	0	0	0	0	39	40	24	27	37	12	30	40	65	17	81	79	44	35	35	70	93	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	3	0	4	4	0	0	0	8	11	57	4	4	10	30	25	50	2	1	17	61	25	4	7	2	1	2	0	1	9	7	3	3	0	11	1	90	67	0	17	0	30	20	100	3	12	0	4	8	4	2	0	2	17	11	6	6	8	3	3	11	13	7	6	146	259	198	238	153	200	200	195	190	81	21	0	3	0	0	4	0	9	1	0	0	288	213	0	242	100	50	78	118	86	158	25	445	649	591	133	0	2	2	27	0	163	641	58	1064	141	27	0	0	220	12	1899	234	55	48	13	37	27	245	159	1	2	8	10	2	0	31	44	20	840	364	692	878	1855	1250	1209	1252	1345	3543	1159	640	237	25	46	115	55	59	0	0	172	92	0	107	333	36	0	0	1	453	441	12	424	0	0	4	0	1	281	0	4	0	0	0	0	0	1	0	0	0	0	0	4	8	575	3841	596	4031	727	5509	350	2439	32	171	2	0	3	1848	1109	1233	1417	169	600	640	273	9	589	122	480	773	2753	2713	1	3580	2308	17	158	1454	2093	3955	7	1	6	1	1	0	46	12	15	4	2	13481	31200	9084	3360	5577	19668	9981	3	272	2	6	631	14
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	52486.00	52486	0	0	0	0	2	1	0	0	0	1	0	0	0	0	0	0	0	1	1	0	15	7	9	0	0	0	0	0	0	0	0	0	0	0	0	18	23	24	13	15	7	15	29	23	11	44	55	15	16	28	31	29	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	4	1	0	15	3	0	0	0	1	7	27	5	12	8	13	9	18	1	0	13	36	17	3	1	3	0	0	0	1	4	2	1	4	1	4	0	31	22	0	12	1	13	7	38	1	6	0	4	5	0	0	1	1	17	9	4	8	11	0	0	5	28	7	5	63	120	66	141	83	43	88	78	84	32	20	1	1	0	1	0	0	5	1	1	0	192	186	0	159	0	1	48	82	5	97	6	195	24	300	8	8	1	0	2	0	98	158	12	258	62	4	0	0	58	2	394	57	4	5	3	16	12	125	82	0	1	3	3	0	0	13	10	5	317	166	179	136	990	958	748	948	858	3304	798	370	118	1	1	53	1194	895	0	0	108	50	0	62	114	13	0	0	0	192	167	4	125	0	0	0	0	0	93	0	2	0	0	0	0	0	0	0	0	0	0	0	7	9	268	2083	285	1660	357	2726	139	920	14	75	0	0	0	657	501	470	489	165	443	382	158	3	142	57	187	288	1013	721	1	1088	803	2	57	567	1072	2139	9	0	1	0	1	1	22	12	4	3	3	2162	6415	1741	571	856	1842	1200	0	58	3	1	232	16
.................................................................................................................AATGGCACTGGAAGAATTCACGATC.......................................................................................................................................................	25	1	51197.00	51197	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43222	7975	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	35150.00	35150	0	0	0	0	1	1	0	1	0	0	3	0	1	0	0	1	0	0	0	0	20	14	12	0	0	1	2	0	0	0	0	0	0	0	0	17	72	14	26	11	14	81	27	34	16	37	155	13	23	27	76	18	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	1	5	0	0	0	9	1	4	1	0	4	11	7	32	0	0	6	11	9	0	0	0	1	0	0	1	0	1	0	0	0	1	1	24	21	0	4	0	3	4	38	0	7	0	7	4	0	1	1	0	4	4	8	3	0	0	0	2	5	4	8	57	115	121	116	96	57	140	68	56	45	41	0	1	1	0	12	0	1	5	7	3	50	69	0	45	4	2	17	23	6	26	4	77	47	135	7	5	5	5	7	0	48	178	18	273	41	2	2	0	41	2	433	60	2	4	2	2	5	97	101	0	5	4	0	0	6	25	35	11	97	46	113	140	328	191	163	194	223	489	137	84	39	5	5	18	53	37	0	0	48	27	0	43	54	10	0	0	0	145	112	1	80	0	0	1	0	1	45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	247	2136	165	1337	193	3791	88	946	7	48	0	0	2	406	304	254	433	318	368	324	108	5	149	66	270	278	1157	624	0	1030	839	8	14	210	523	824	0	0	1	0	0	1	2	1	1	1	0	1448	4440	1808	356	573	1327	754	0	51	1	0	103	3
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	25108.00	25108	0	0	0	0	1	2	0	4	12	15	3	0	2	0	6	0	0	0	0	0	39	42	7	21	0	4	7	1	31	11	21	16	0	2	0	34	41	29	22	36	11	113	146	40	13	61	112	74	96	117	214	123	18	0	0	0	251	188	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	98	30	293	143	14	3	0	32	18	91	11	9	9	13	21	61	12	6	63	70	46	4	0	1	5	0	2	3	9	7	57	57	1	24	2	19	4	0	6	0	0	0	3	0	15	1	8	5	0	0	0	0	0	0	1	0	0	0	12	23	100	56	4	62	273	216	227	133	24	180	113	227	111	0	0	0	0	0	9	0	29	11	0	0	47	61	0	52	3	2	6	18	13	23	38	47	11	51	25	0	8	0	39	2	32	429	57	165	61	5	0	1	93	3	95	14	0	0	0	0	0	69	103	0	0	8	1	0	0	8	8	8	195	240	144	162	254	43	74	64	109	52	125	161	0	0	0	1	0	0	0	0	614	521	1	67	1	10	0	1	1	55	58	0	35	0	0	0	0	0	5	0	1	0	0	0	2	0	0	0	0	14	1	0	3	8	347	1510	185	896	348	1908	224	1262	8	19	0	0	1	108	76	43	67	565	577	73	40	0	47	358	878	372	866	275	1	134	280	14	35	793	757	610	1	0	0	0	0	0	31	3	1	0	1	245	384	317	256	220	21	179	0	14	0	0	9	0
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....................................................................................................................GGCACTGGAAGAATTCACGG.........................................................................................................................................................	20	1	1365.00	1365	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	1	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2	0	8	0	0	0	0	0	1	1	18	6	9	6	4	7	0	8	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	1	0	1	83	6	7	4	0	0	0	16	0	14	5	0	0	0	0	0	15	14	0	0	0	0	0	0	2	0	0	27	8	33	45	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	64	351	21	138	27	171	10	73	0	0	0	0	0	4	5	0	2	2	1	1	2	0	0	0	7	1	9	2	0	1	1	0	0	17	7	13	0	0	0	0	0	0	0	0	0	0	0	9	9	5	2	5	3	2	0	0	0	0	0	17
.................................................................................................................AATGGCACTGGAAGAATTCACGAC........................................................................................................................................................	24	1	1306.00	1306	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	2	0	0	0	3	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	2	1	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	1036	155	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	0	4	1	13	0	3	0	0	0	0	0	1	3	3	2	0	1	1	0	0	1	2	1	8	18	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCATC..........................................................................................................................................................	22	1	1274.00	1274	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1125	90	0	0	0	0	0	0	0	0	0	0	0	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	1	0	8	0	2	0	0	0	0	0	1	2	4	0	0	0	0	0	0	2	0	0	2	1	6	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCC............................................................................................................................................................	20	1	1264.00	1264	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	20	7	0	0	0	3	1	5	6	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	31	13	0	0	0	1	0	1	0	11	0	8	13	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	1	0	4	0	3	1	2	1	2	2	0	0	0	0	0	0	0	0	0	0	0	15	23	0	8	0	0	1	0	0	0	0	2	0	4	0	0	0	0	0	0	1	0	0	7	0	0	0	0	1	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	7	2	0	0	0	1	0	2	0	1	0	0	0	0	15	0	0	0	1	1	0	1	42	4	0	0	0	10	15	0	2	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	42	5	37	11	31	0	6	0	0	0	0	0	8	6	11	53	3	4	18	14	0	14	12	1	33	3	330	0	122	70	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	10	21	13	9	10	13	15	0	1	0	0	1	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	1191.00	1191	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	3	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	3	1	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	7	6	0	7	1	0	1	4	0	7	0	12	0	18	0	0	0	0	0	0	3	2	0	7	0	0	0	0	3	1	6	0	1	0	0	0	0	5	0	0	0	0	0	0	0	1	0	0	5	2	4	2	17	60	3	30	19	263	17	19	11	0	0	4	50	56	0	0	1	1	0	1	0	0	0	0	0	1	3	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	33	7	27	8	53	1	22	0	3	0	0	0	15	9	11	8	9	2	4	3	0	1	0	4	1	7	8	0	19	18	0	2	2	12	30	0	0	0	0	0	0	0	0	0	0	0	19	89	20	0	9	11	15	0	0	0	0	3	0
....................................................................................................................GGCACTGGAAGAATTCACG..........................................................................................................................................................	19	1	1000.00	1000	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	9	8	6	7	9	3	0	5	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	17	2	7	1	0	0	0	20	1	12	7	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	3	10	4	29	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	48	284	24	119	16	140	10	56	0	2	0	0	0	5	7	3	6	2	0	5	0	0	2	0	2	1	3	5	0	4	5	0	2	5	5	9	0	0	0	0	0	0	0	0	0	0	0	9	9	4	1	4	3	5	0	1	0	0	0	0
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	981.00	981	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	1	0	0	2	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	15	9	0	0	0	4	4	14	0	3	6	1	8	8	1	0	16	11	1	0	3	1	0	0	0	0	1	1	7	7	0	9	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	2	4	2	0	1	0	0	0	0	0	2	3	1	0	0	0	0	5	0	1	1	0	0	0	0	0	0	0	0	0	0	1	1	0	2	1	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	0	6	0	2	0	2	0	0	2	0	8	1	0	0	0	0	0	8	7	0	0	0	0	0	0	1	0	0	9	4	8	3	13	6	6	6	3	14	2	1	0	0	0	0	0	0	0	0	7	3	0	1	1	0	0	0	0	1	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	174	2	30	2	38	3	26	0	0	0	0	0	0	2	0	1	3	7	2	1	0	2	0	4	7	6	6	0	10	16	0	0	9	6	22	0	0	0	0	0	0	0	0	0	0	0	28	24	14	6	24	28	42	0	1	0	0	0	110
.................................................................................................................AATGGCACTGGAAGAATTCACGAT........................................................................................................................................................	24	1	969.00	969	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	4	1	0	1	0	0	1	0	0	0	0	0	0	750	135	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	5	0	2	0	0	0	0	0	0	0	2	0	1	2	0	1	0	0	0	1	0	0	2	8	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	21	4	0	0	2	1	0	0	0	0	0	0

droEug1

ATCTAA------------------AGTGAA-------------------ATCAAAG-AAGAAGTTGC---AGAATCTT-GTGAAGTGT-----TCAATCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACATCCAAA----------------------------AGTT-GAAAAAGTAT--------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AAGTAA------------------AGTGAAAAAT-------AAAGTGA----------------TAT-------GC-GA-TGAA--GT----------AATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTGATTT-TA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAACAAAACAACCACA---TGAAGCAAAATTCAAATCAACCTA-TGGGTAAAAATGTGT--------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TCATAA------------------AGTGAA-------------------AACAAAG-AACAAGATTT---TC-----AA-TC--GTGT----------AATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATTTATGGTGCGGGAATAAAACATCAAAA---AGTTACA-----------------------AAAAATGTGT--------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AAATAA------------------AGTGAA-------------------GTCAAAA-TATAAAATAC---TAGTTCTT-G-AAAGTGT-----AACTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTCA--TACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAAACATCAAAA---T----------------CAATCAATGGTT-ATAAATGTGT--------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AATTAA------------------AGTGAA--------------GTGAATCCAAAG-AATGAGATGC---TCAATCTT-T-AAAGTGT-----TACTACATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAAACATCCAAA---TGAACAAAGATTCAAGTCAATCAAAAGTT--AAAACGTGT--------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AATTAT------------------AGTGAA-------------------ACCAAAG-AGCAAGATAT---ATAATCTT-GACAA--GT-----CACTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAGACATCAAAT----CA---------------AATCAAAAGCT-AAGAATGTGA--------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TGAAAT------------------TGT--------AAGACA------------AGA--------TCT---AAGATCTT-GCAGAGTGT-----TAAACCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTCTA--AACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATTGAACATCCAATC--AGAATCAAAATCAAAATCA----AAAGTT-ATAAATGTGT--------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droAna3

GT---A------------------AGTGGAAAA--------AAAGTGAAA-------------------------------CAA--GT-----TTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACATCAAAAAAGTGAACAAAAA-------A---CT----CTGA--AAAGTGTGAA---------------------------ACTCTGAATATTTC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	128258.00	128258	49041	14611	1620	5169	15333	42484
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	80543.00	80543	28934	7702	410	3031	8534	31932
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	79574.00	79574	21242	903	224	8349	18154	30702
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	66838.00	66838	11558	887	212	4812	8891	40478
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	32703.00	32703	6902	29	62	3243	7357	15110
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	9851.00	9851	1967	374	53	403	1848	5206
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	8357.00	8357	792	9	20	642	2371	4523
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	5198.00	5198	5048	56	3	10	24	57
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	3326.00	3326	725	1272	106	140	332	751
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	2959.00	2959	2879	25	0	2	13	40
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	2432.00	2432	2369	2	2	10	20	29
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	2295.00	2295	242	37	5	115	322	1574
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	2278.00	2278	361	75	15	132	507	1188
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	1349.00	1349	152	3	4	124	333	733
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	1308.00	1308	1265	1	0	5	6	31
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	816.00	816	147	26	9	69	171	394
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	720.00	720	702	0	0	1	9	8
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	473.00	473	67	145	10	47	61	143
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	467.00	467	196	63	6	19	71	112
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	432.00	432	102	16	2	69	21	222
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	380.00	380	33	17	5	22	65	238
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	373.00	373	31	311	12	2	7	10
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	366.00	366	75	117	3	24	27	120
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	332.00	332	112	123	20	6	25	46
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	328.00	328	21	2	0	28	107	170
.................................................................................................................AATGGCACTGGAAGAATTT.............................................................................................................................................................	19	1	320.00	320	52	0	0	18	98	152
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	307.00	307	296	3	1	1	4	2
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	287.00	287	28	46	0	42	27	144
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	270.00	270	32	3	0	12	84	139
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	256.00	256	73	52	2	16	23	90
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	237.00	237	219	0	1	2	3	12
.................................................................................................................AATGGCACTGGAAGAATTCAG...........................................................................................................................................................	21	1	232.00	232	1	5	0	5	92	129
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	232.00	232	226	3	0	0	2	1
.................................................................................................................AATGGCACTGGAAGAATTCT............................................................................................................................................................	20	1	185.00	185	35	0	0	20	50	80
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	175.00	175	173	0	1	0	1	0
.................................................................................................................AATGGCACTGGAAGAATTCACGTT........................................................................................................................................................	24	1	140.00	140	8	0	1	8	45	78
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	121.00	121	24	5	4	49	16	23
...................................................................................................................TGGCACTGGAAGAATTCAC...........................................................................................................................................................	19	1	115.00	115	109	0	0	0	2	4
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	92.00	92	65	6	0	0	13	8
..................................................................................................................ATGGCACTGGAAGAATTC.............................................................................................................................................................	18	1	87.00	87	79	0	0	1	2	5
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	85.00	85	74	8	0	0	0	3
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	70.00	70	20	28	2	10	5	5
.................................................................................................................AATGGCACTGGAAGAATTCACTT.........................................................................................................................................................	23	1	54.00	54	10	0	0	5	9	30
....................................................................................................................GGCACTGGAAGAATTCACGG.........................................................................................................................................................	20	1	48.00	48	37	2	0	0	2	7
...................................................................................................................TGGCACTGGAAGAATTCA............................................................................................................................................................	18	1	48.00	48	47	0	0	0	0	1
.................................................................................................................AATGGCACTGGAAGAATTCACGGAA.......................................................................................................................................................	25	1	47.00	47	3	31	1	0	4	8
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	46.00	46	37	2	0	0	5	2
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	46.00	46	21	10	1	3	7	4
....................................................................................................................GGCACTGGAAGAATTCACG..........................................................................................................................................................	19	1	41.00	41	24	0	0	2	3	12
..................................................................................................................ATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	23	1	37.00	37	36	0	1	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCG............................................................................................................................................................	20	1	37.00	37	1	0	0	6	7	23
.....................................................................................................................GCACTGGAAGAATTCACGG.........................................................................................................................................................	19	1	36.00	36	27	3	0	0	3	3

droBip1

AAATGA------------------A----------------AAAGTGAAA-------------------------------AAAATGT-----TTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACATCAAAAGAGTGAA-----TACAAAAAAAACCAA-TG-----AAAAGTGT--------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGTTAAATCAAAACTAGTCACAAAAGTGAAATAA-------GAAGTGAAA-----------------------AACTC-A-TAAGTGT-----ATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CATCTCAA---TCAATCTCAATCG----CAACCAA-CGTTGATAATTGTGT--------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	2199034.00	2199034	2983	85902	75028	2710	14926	3248	31805	322556	833128	826748
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	647694.00	647694	1246	46411	16672	1780	1578	1423	15541	79384	327766	155893
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	221248.00	221248	196	35322	2049	694	1322	3824	12772	49029	81773	34267
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	195255.00	195255	105	26481	2543	1643	1463	3596	15723	22481	103385	17835
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	52873.00	52873	65	4431	1896	256	380	249	5932	5932	27255	6477
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	41774.00	41774	20	17910	49	83	218	2480	7251	875	11978	910
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	15063.00	15063	14	8682	110	17	22	12	83	1145	2376	2602
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	13679.00	13679	1	861	238	61	39	75	814	1655	7987	1948
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	8465.00	8465	128	1240	586	86	72	55	521	558	2780	2439
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	7576.00	7576	115	2293	2	53	13	452	1202	206	2886	354
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	6420.00	6420	7	4707	25	7	1	4	47	216	903	503
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	4216.00	4216	0	3725	1	2	0	10	30	128	221	99
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	3203.00	3203	0	2860	4	5	1	4	21	41	220	47
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	2324.00	2324	4	574	70	64	9	83	541	330	544	105
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	1832.00	1832	0	1787	1	0	0	5	6	1	31	1
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	1741.00	1741	2	37	897	54	21	12	31	73	279	335
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	1278.00	1278	2	76	130	12	4	6	51	161	542	294
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	1178.00	1178	1	109	8	16	4	19	122	36	841	22
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	1116.00	1116	0	76	4	6	0	8	246	51	653	72
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	950.00	950	5	59	479	83	14	5	30	105	131	39
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	890.00	890	6	145	392	16	266	14	20	10	9	12
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	812.00	812	0	252	14	28	4	73	159	34	212	36
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	650.00	650	1	465	5	0	0	2	21	34	94	28
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	635.00	635	0	550	7	0	1	0	9	8	22	38
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTAA-....................................................................................................................................................	27	1	534.00	534	0	1	0	0	0	0	1	12	518	2
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	403.00	403	0	123	16	6	2	7	21	54	118	56
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	385.00	385	0	123	1	1	11	29	42	14	145	19
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	384.00	384	3	35	41	7	8	2	12	54	177	45
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	313.00	313	0	290	3	2	0	0	0	5	8	5
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	293.00	293	2	116	5	0	2	19	23	24	85	17
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	257.00	257	0	245	0	0	0	0	3	2	6	1
..................................................................................................................ATGGCACTGGAAGAATTC.............................................................................................................................................................	18	1	230.00	230	0	219	0	0	0	0	4	1	4	2
.................................................................................................................AATGGCACTGGAAGAATTT.............................................................................................................................................................	19	1	210.00	210	1	128	0	0	0	9	67	0	3	2
...................................................................................................................TGGCACTGGAAGAATTCAC...........................................................................................................................................................	19	1	190.00	190	0	188	0	0	0	0	1	0	1	0
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	176.00	176	4	49	1	0	0	0	3	25	42	52
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	168.00	168	1	2	87	21	1	5	20	4	15	12
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	168.00	168	3	61	35	0	46	5	13	4	0	1
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTA......................................................................................................................................................	26	1	168.00	168	0	12	1	4	0	0	9	33	83	26
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	150.00	150	2	131	1	0	0	0	1	4	5	6
...................................................................................................................TGGCACTGGAAGAATTCA............................................................................................................................................................	18	1	138.00	138	0	137	0	0	0	0	0	0	1	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	23	1	133.00	133	0	95	0	0	0	0	5	8	19	6
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	107.00	107	0	90	2	0	5	0	5	0	4	1
.................................................................................................................AATGGCACTGGAAGAATTCACGTT........................................................................................................................................................	24	1	107.00	107	0	19	2	2	0	5	52	11	13	3
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	106.00	106	0	12	9	3	5	4	15	6	45	7
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	105.00	105	0	19	25	7	3	7	19	4	17	4
................................................................................................................TAATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	25	1	98.00	98	0	73	5	0	1	0	0	3	9	7
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	89.00	89	7	38	14	0	1	0	3	9	11	6
.................................................................................................................AATGGCACTGGAAGAATTCACGAC........................................................................................................................................................	24	1	86.00	86	0	0	79	3	0	0	0	4	0	0
....................................................................................................................GGCACTGGAAGAATTCACGG.........................................................................................................................................................	20	1	78.00	78	1	75	0	0	0	0	2	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCT............................................................................................................................................................	20	1	73.00	73	0	38	0	0	0	9	19	0	7	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGGT......................................................................................................................................................	26	1	67.00	67	0	7	1	0	0	1	7	37	4	10
..................................................................................................................ATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	22	1	65.00	65	0	59	0	1	0	1	2	0	2	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGTA.......................................................................................................................................................	25	1	64.00	64	0	5	1	1	0	0	9	11	33	4
.....................................................................................................................GCACTGGAAGAATTCACGG.........................................................................................................................................................	19	1	62.00	62	1	27	0	0	0	0	0	3	20	11
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTC......................................................................................................................................................	26	1	60.00	60	0	2	5	2	1	0	2	28	20	0
....................................................................................................................GGCACTGGAAGAATTCACG..........................................................................................................................................................	19	1	50.00	50	0	44	0	0	1	1	4	0	0	0
................................................................................................................TAATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	24	1	43.00	43	0	31	0	1	0	0	0	5	6	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGAT.......................................................................................................................................................	25	1	43.00	43	0	0	0	0	0	0	4	4	29	6
.................................................................................................................AATGGCACTGGAAGAATTCACGGGCC......................................................................................................................................................	26	1	39.00	39	0	0	0	0	0	0	0	24	15	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGTAA......................................................................................................................................................	26	1	39.00	39	0	0	1	0	0	0	1	0	37	0
.................................................................................................................AATGGCACTGGAAGAAT...............................................................................................................................................................	17	1	37.00	37	0	0	0	0	0	0	0	8	21	8
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTG......................................................................................................................................................	26	1	37.00	37	0	0	1	0	0	0	0	30	6	0
...................................................................................................................TGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	23	1	37.00	37	0	30	1	0	0	0	2	0	4	0
....................................................................................................................GGCACTGGAAGAATTCAC...........................................................................................................................................................	18	1	35.00	35	0	31	0	1	1	0	2	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGAA.......................................................................................................................................................	25	1	33.00	33	2	5	2	1	0	1	1	8	10	3

droPer2

AGTTAAATCAAAACTAGTCACAAAAGTGAAATAA-------GAAGTGAAA-----------------------AACTC-A-TAAGTGT-----ATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CATCTCAA---TCAATCCCAATCG----CAACCAA-CGTTGATAATTGTGT--------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	66268.00	66268	35125	9338	2285	1883	6915	10722
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	24570.00	24570	320	1958	162	4308	14760	3062
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	21305.00	21305	5813	4715	304	864	3870	5739
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	19534.00	19534	606	4055	349	2938	8932	2654
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	12871.00	12871	24	886	73	2476	7933	1479
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	3199.00	3199	158	444	61	112	710	1714
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	2585.00	2585	27	85	8	403	1647	415
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	1525.00	1525	952	111	33	43	173	213
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	1136.00	1136	72	1005	1	9	24	25
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	607.00	607	7	93	5	53	202	247
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	554.00	554	9	513	0	3	15	14
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	537.00	537	364	56	46	10	50	11
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	464.00	464	3	69	1	62	219	110
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	455.00	455	0	416	1	10	24	4
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	352.00	352	1	25	3	63	238	22
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	245.00	245	1	222	1	7	9	5
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	148.00	148	2	11	2	20	98	15
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	138.00	138	124	3	0	0	5	6
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	132.00	132	0	5	2	27	97	1
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	128.00	128	2	11	1	18	91	5
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	128.00	128	32	14	1	8	49	24
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	115.00	115	78	8	6	2	18	3
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	112.00	112	0	97	0	3	10	2
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	102.00	102	29	25	1	9	14	24
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	83.00	83	76	2	0	0	4	1
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	81.00	81	8	67	0	1	0	5
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	75.00	75	0	5	1	14	53	2
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	67.00	67	0	1	2	5	57	2
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	64.00	64	12	8	4	3	16	21
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	64.00	64	53	4	0	2	0	5
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	60.00	60	0	54	0	0	1	5
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	60.00	60	0	4	0	2	18	36
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	47.00	47	5	2	0	3	36	1
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	44.00	44	1	7	0	9	22	5
.................................................................................................................AATGGCACTGGAAGAATTCT............................................................................................................................................................	20	1	44.00	44	0	2	0	4	36	2
.................................................................................................................AATGGCACTGGAAGAATTT.............................................................................................................................................................	19	1	41.00	41	0	2	0	1	25	13
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	36.00	36	1	33	0	0	1	1
......................................................................................................................CACTGGAAGAATTCACGGG........................................................................................................................................................	19	1	35.00	35	30	1	2	0	0	2
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	33.00	33	0	31	0	1	1	0
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	29.00	29	2	19	4	0	1	3
.................................................................................................................AATGGCACTGGAAGAATTCC............................................................................................................................................................	20	1	28.00	28	0	1	0	6	21	0
.................................................................................................................AATGGCACTGGAAGAATTCG............................................................................................................................................................	20	1	27.00	27	0	0	0	3	24	0
.................................................................................................................AATGGCACTGGAAGAATTCACGTT........................................................................................................................................................	24	1	20.00	20	0	2	0	0	13	5
...................................................................................................................TGGCACTGGAAGAATTCAC...........................................................................................................................................................	19	1	19.00	19	0	19	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCAG...........................................................................................................................................................	21	1	18.00	18	0	0	0	4	14	0
....................................................................................................................GGCACTGGAAGAATTCACGG.........................................................................................................................................................	20	1	17.00	17	1	8	2	0	1	5
.................................................................................................................AATGGCACTGGAAGAATTCACGCT........................................................................................................................................................	24	1	15.00	15	0	0	0	0	15	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	23	1	15.00	15	0	13	0	1	1	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	15.00	15	0	10	0	0	2	3
............................................................................................................................................................CGTGATCTCTTAGTGGCATC.................................................................................................................	20	1	15.00	15	12	1	0	1	1	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGCT.......................................................................................................................................................	25	1	14.00	14	1	0	0	0	11	2

droWil2

A---------------------------------------------------------------------------------------------------TCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATTTAACAC-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTTAAGCATACAGA---ACATCCGACATC----------------------AAGTGTTAATTGTATATATATATATAATTTTTGTGATTTTTGAA-----C	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	397204.00	397204	72410	21126	32869	217800	52999
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	154925.00	154925	5395	4607	15433	13244	116246
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	113580.00	113580	26901	11187	24527	17768	33197
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	68554.00	68554	5333	6043	20012	6651	30515
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	40095.00	40095	623	2370	6635	1270	29197
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	23596.00	23596	3323	238	1456	95	18484
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	15066.00	15066	621	887	5636	2495	5427
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	8509.00	8509	4362	362	936	1831	1018
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	2440.00	2440	65	2055	33	220	67
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	1826.00	1826	47	134	574	479	592
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	1752.00	1752	44	32	269	29	1378
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	1667.00	1667	426	40	33	1099	69
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	1476.00	1476	59	58	236	91	1032
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	1270.00	1270	28	1155	25	13	49
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	1170.00	1170	42	77	335	53	663
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	667.00	667	4	599	22	8	34
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	637.00	637	3	466	16	17	135
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	618.00	618	108	14	104	282	110
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	591.00	591	18	7	19	12	535
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	583.00	583	492	10	24	22	35
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	500.00	500	66	21	75	151	187
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	486.00	486	435	10	12	20	9
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	474.00	474	14	12	48	11	389
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	420.00	420	21	32	28	11	328
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	317.00	317	63	17	44	100	93
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	306.00	306	0	257	6	2	41
.................................................................................................................AATGGCACTGGAAGAATTT.............................................................................................................................................................	19	1	300.00	300	5	5	24	1	265
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	238.00	238	52	9	7	153	17
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	237.00	237	8	14	154	7	54
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	196.00	196	18	17	46	9	106
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	183.00	183	9	139	14	9	12
.................................................................................................................AATGGCACTGGAAGAATTCC............................................................................................................................................................	20	1	180.00	180	2	0	6	3	169
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	156.00	156	3	5	14	6	128
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	135.00	135	94	24	6	7	4
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	132.00	132	29	1	47	17	38
.................................................................................................................AATGGCACTGGAAGAATTCACGTT........................................................................................................................................................	24	1	117.00	117	1	7	49	1	59
.................................................................................................................AATGGCACTGGAAGAATTCT............................................................................................................................................................	20	1	116.00	116	0	4	17	0	95
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	103.00	103	0	93	3	2	5
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	76.00	76	1	63	10	0	2
.................................................................................................................AATGGCACTGGAAGAATTA.............................................................................................................................................................	19	1	74.00	74	0	1	2	0	71
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTA......................................................................................................................................................	26	1	67.00	67	21	7	24	6	9
...................................................................................................................TGGCACTGGAAGAATTCAC...........................................................................................................................................................	19	1	58.00	58	0	43	5	1	9
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	56.00	56	3	33	10	5	5
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	52.00	52	0	44	3	0	5
.................................................................................................................AATGGCACTGGAAGAATTCG............................................................................................................................................................	20	1	47.00	47	4	2	6	1	34
.................................................................................................................AATGGCACTGGAAGAATTCACTT.........................................................................................................................................................	23	1	42.00	42	1	1	3	0	37
..................................................................................................................ATGGCACTGGAAGAATTC.............................................................................................................................................................	18	1	39.00	39	1	19	0	0	19
....................................................................................................................GGCACTGGAAGAATTCACG..........................................................................................................................................................	19	1	38.00	38	1	20	9	1	7
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	38.00	38	1	32	1	1	3
.....................................................................................................................GCACTGGAAGAATTCACGG.........................................................................................................................................................	19	1	36.00	36	17	5	9	0	5

droVir3

GTTCGT------------------ACCTG-----TAGAACA------------GGCAAGTTACATCTGCT---T---AA-TG----TTGCTTGCTCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	2122360.00	2122360	135078	53673	52413	38315	4819	5884	5437	7485	9116	9160	3577	14	51	26	6368	4174	1569	4939	2346	3985	8996	2615	8276	5856	7589	8120	22402	16627	14200	21838	9016	27186	24	11425	31	20	59	55	5536	5560	206	446	496	74	61	991	746	1324	2533	3731	6694	8242	5349	8321	6447	5160	4032	11275	41629	5664	8137	80142	3636	6856	9443	1053	1506	1873	269702	239519	179035	161002	247556	218418	653	17973	12602	11479	14494
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	641016.00	641016	49102	21077	29164	8581	2027	3840	2033	4743	5339	7807	3516	6	59	9	361	204	53	319	185	252	4579	262	7227	2930	3018	3760	6897	4324	6345	14820	4304	12607	22	8179	14	29	37	39	2565	3507	137	318	416	9	9	69	49	99	194	472	822	1514	942	1644	1260	6748	5076	20289	11403	576	4231	42020	263	2448	2600	1109	1301	424	57928	47372	44196	30293	56984	49481	185	6439	4941	5872	6741
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	223175.00	223175	4702	2399	17537	658	2135	3705	2325	1332	1582	2909	741	13	32	5	4326	2508	1550	4194	3002	2058	2180	3065	5439	2960	2231	2096	4483	2930	4287	8874	2744	7477	13	6915	16	19	30	30	2212	3665	16	28	25	1	2	4	4	9	19	20	32	66	50	68	46	421	330	1946	382	243	6844	43943	483	1648	2039	364	469	294	7616	6559	6323	4335	9232	7305	137	509	426	715	843
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	71545.00	71545	1130	794	6503	272	429	1037	1000	670	986	1498	479	8	5	13	2254	1215	796	1712	1384	657	834	1441	1607	845	761	618	1676	1027	1008	1990	576	1926	7	1769	3	3	12	9	747	1059	0	9	6	0	0	2	1	6	4	6	15	20	13	20	14	47	55	429	115	138	3078	15753	62	299	696	82	113	72	1627	1487	1199	899	2068	1548	38	197	178	222	267
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	68839.00	68839	6865	4572	1092	859	41	115	42	80	109	109	26	0	9	1	409	226	69	212	183	236	102	134	428	77	118	199	426	238	253	646	222	574	2	245	0	3	7	4	72	99	27	72	90	1	1	15	13	17	40	106	174	265	162	256	222	451	355	2376	2812	70	375	2794	52	159	156	175	219	46	6716	6118	4889	3880	7166	6427	16	922	706	656	738
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	46371.00	46371	1249	425	1627	771	53	406	101	731	305	1046	162	2	11	3	568	332	117	417	256	416	484	307	872	72	170	266	669	347	902	1755	622	1752	0	825	0	2	0	3	118	276	8	24	20	2	0	5	12	13	17	22	43	87	65	81	63	251	188	1179	539	108	619	7653	112	226	215	52	51	28	2673	2370	2027	1429	3255	2405	7	611	438	463	570
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	30153.00	30153	209	169	3797	19	102	395	224	547	208	457	105	0	4	0	1004	577	308	715	800	369	217	724	826	237	188	157	349	160	294	739	228	545	1	573	1	1	4	1	161	351	1	1	0	0	0	0	0	2	1	1	9	10	2	8	4	13	12	77	42	30	2528	9515	36	56	201	3	1	0	407	351	222	249	328	234	1	13	9	11	9
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	12501.00	12501	57	47	136	100	430	218	1075	0	14	10	2	0	0	0	39	28	18	28	25	6	231	13	32	156	59	60	82	75	65	35	33	39	1	41	1	2	1	0	369	104	0	0	0	1	0	10	4	8	18	10	23	37	18	29	20	5	5	3	69	34	21	54	0	39	76	0	0	0	1621	1939	941	935	1733	1213	1	1	0	0	1
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	9346.00	9346	1358	1286	712	1	13	207	62	297	114	313	94	3	6	11	128	93	43	80	136	58	72	147	143	46	17	14	31	8	28	85	26	61	0	119	2	0	0	0	39	73	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	23	1	4	697	2513	26	6	6	0	1	0	15	23	27	5	37	22	0	5	1	0	3
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	6899.00	6899	151	61	5389	67	11	2	7	9	14	11	6	0	0	0	8	5	3	10	3	8	14	5	15	12	6	12	28	23	22	29	13	41	0	16	0	0	0	0	6	7	0	0	0	0	0	0	0	0	1	1	1	1	2	1	2	5	4	11	14	6	11	117	176	4	12	0	2	0	84	71	84	77	94	61	2	10	5	12	14
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	5069.00	5069	103	59	347	108	12	69	17	51	31	128	9	0	1	0	109	75	28	89	47	82	66	80	155	26	21	32	61	34	97	264	53	206	0	169	0	0	0	0	31	59	0	1	2	1	0	0	0	0	0	1	1	4	0	2	0	13	12	91	17	63	169	1253	42	29	28	2	4	5	67	64	58	40	94	58	1	49	57	57	65
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	4412.00	4412	626	504	44	25	1	2	2	1	1	0	0	0	0	0	28	17	6	7	13	17	1	9	32	2	5	15	17	6	16	55	11	34	1	5	0	0	0	0	1	3	3	2	5	1	0	0	1	1	3	5	5	9	15	10	2	18	22	202	134	0	9	45	4	9	1	129	133	9	221	294	196	106	292	285	12	220	165	150	187
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	3333.00	3333	65	26	2889	14	3	2	0	4	7	9	9	0	0	0	1	0	0	0	1	0	6	2	11	4	5	4	3	7	4	11	3	12	0	17	0	0	0	0	2	4	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	5	2	8	1	0	6	67	14	0	2	0	0	1	9	9	20	19	21	8	0	2	2	3	8
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	2889.00	2889	50	41	237	32	6	31	10	24	10	43	7	0	3	0	49	34	31	72	55	38	52	44	110	18	9	12	26	5	31	116	25	66	0	167	0	0	0	0	16	36	0	1	0	0	0	1	0	0	0	0	1	2	1	1	2	3	13	81	4	6	125	874	1	14	15	10	10	4	5	8	22	3	14	12	2	46	24	35	43
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	2677.00	2677	1114	628	25	28	0	3	1	7	0	8	2	0	0	0	1	0	0	1	1	1	2	0	8	1	0	3	0	4	2	3	2	5	0	3	0	0	0	0	0	2	2	0	2	0	0	0	0	0	0	3	8	12	3	12	1	20	7	59	40	4	6	81	17	6	2	1	2	0	105	78	82	39	103	104	0	9	3	7	4
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	2638.00	2638	222	51	44	1	2	11	9	12	13	11	3	0	0	0	4	2	0	3	2	2	33	2	4	16	5	2	6	5	4	15	3	7	0	25	0	0	0	0	11	10	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	6	6	0	2	0	1	3	11	0	4	1	4	4	420	320	251	211	284	513	2	6	10	12	25
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	2477.00	2477	34	8	73	3	10	231	9	1	0	108	0	0	0	0	2	1	3	5	9	2	163	4	3	10	2	0	4	7	173	303	74	276	0	207	0	0	0	0	6	176	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	24	2	3	62	380	0	1	4	3	8	1	2	0	6	1	13	14	1	11	8	9	13
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	2163.00	2163	256	77	103	41	12	11	4	19	7	19	9	1	0	0	24	18	10	30	20	26	21	21	49	15	13	6	35	12	18	50	11	42	0	19	1	1	0	0	11	9	1	0	1	0	0	0	0	0	0	2	3	2	1	5	3	6	4	55	17	8	37	308	9	9	7	10	9	5	88	81	78	51	103	82	0	34	37	39	47
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	1999.00	1999	5	1	1861	1	1	3	3	3	0	0	0	0	0	0	1	0	0	6	1	0	3	2	2	1	2	0	4	2	5	3	2	5	0	4	0	0	0	0	5	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	52	3	0	0	0	0	0	0	1	1	5	2	0	0	1	1	0	0
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	1688.00	1688	12	17	35	6	40	39	240	0	0	1	3	0	0	0	12	4	5	6	2	2	27	6	8	29	9	4	24	24	14	21	8	21	0	17	1	0	0	0	46	31	0	0	0	0	0	2	0	0	2	4	5	2	0	5	2	0	2	0	5	9	9	15	0	0	3	0	0	0	189	167	93	100	197	161	0	0	0	0	2
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	1366.00	1366	292	100	17	281	10	5	7	9	8	13	6	0	0	0	7	7	4	12	1	9	26	8	20	12	12	8	15	12	9	15	4	16	0	28	0	0	0	0	5	18	0	0	0	0	0	1	0	0	0	0	2	3	1	1	2	1	0	2	7	21	22	186	4	3	8	3	2	3	14	8	15	12	17	11	2	5	2	4	8
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	1144.00	1144	15	9	124	3	6	26	40	9	18	29	8	0	1	1	38	15	8	21	23	17	18	25	42	23	13	6	16	0	4	29	7	24	0	30	0	0	0	0	8	10	1	1	2	0	0	0	2	2	1	2	5	2	0	8	4	10	9	92	46	1	57	36	13	5	8	5	7	2	24	29	10	11	38	26	0	3	1	6	9
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	1049.00	1049	26	7	92	1	2	9	3	7	2	17	1	0	1	0	13	6	8	9	15	10	12	20	22	3	1	2	4	1	6	11	4	7	0	26	0	0	0	0	4	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	9	1	1	65	575	0	4	0	0	2	0	1	1	2	1	1	5	0	10	5	6	2
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	1032.00	1032	109	58	36	191	5	12	9	15	32	15	23	0	0	0	12	11	7	6	9	6	13	3	17	0	3	8	28	11	11	10	4	28	0	7	0	0	0	0	2	9	0	0	1	0	0	0	0	0	0	1	1	1	0	4	0	4	1	20	65	6	14	94	1	12	13	2	1	1	12	12	5	12	15	6	0	8	6	2	2
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	872.00	872	6	8	88	1	1	3	0	4	0	3	1	0	0	0	16	18	7	23	17	16	2	16	28	4	4	5	7	4	6	11	5	10	1	9	0	0	0	0	2	9	0	0	0	0	0	0	1	0	0	0	2	0	0	2	0	1	1	11	3	1	67	329	0	8	4	18	20	2	3	2	0	2	6	6	2	10	6	13	17
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	774.00	774	0	0	705	0	0	2	0	0	0	1	0	0	0	0	2	1	0	2	1	2	5	0	1	0	0	1	1	0	0	5	2	2	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	24	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	737.00	737	30	26	58	9	2	8	3	4	4	7	1	0	1	0	14	10	2	14	6	10	4	12	29	2	3	2	5	2	7	18	1	12	2	5	0	0	1	1	5	3	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	3	0	12	3	0	13	104	9	3	3	25	28	6	11	10	12	4	15	6	5	39	25	41	34
......................................................................................................................CACTGGAAGAATTCACGGG........................................................................................................................................................	19	1	731.00	731	32	14	12	2	1	4	2	1	3	4	0	0	0	0	2	1	0	0	0	0	10	0	0	1	1	0	4	1	4	7	2	1	0	4	0	0	0	0	3	2	0	1	0	0	0	1	0	1	3	6	1	3	2	4	3	6	3	11	21	1	0	0	5	3	1	0	1	1	102	108	58	67	89	105	0	0	1	2	3
.....................................................................................................................GCACTGGAAGAATTCACGG.........................................................................................................................................................	19	1	718.00	718	84	19	20	1	3	8	6	6	11	15	14	0	0	0	0	1	0	0	0	0	24	0	4	3	3	1	2	1	3	3	3	1	0	18	0	0	0	0	5	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	0	0	0	1	2	0	0	4	2	2	2	85	65	47	37	69	89	0	3	3	10	16
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	583.00	583	13	7	32	5	0	2	0	7	1	15	0	0	0	0	14	7	3	20	5	9	8	15	29	2	1	1	4	0	5	16	7	19	0	20	0	0	0	0	2	9	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	9	0	0	21	219	0	3	7	2	0	0	2	5	4	3	8	1	0	1	6	7	4
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	530.00	530	14	3	306	8	2	0	1	3	3	1	0	0	0	0	0	1	1	0	0	0	1	2	3	0	2	3	2	3	5	6	5	5	0	3	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	11	5	0	1	2	1	7	62	0	0	0	1	0	8	14	6	4	10	4	0	2	4	1	1
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	477.00	477	16	4	66	3	12	16	14	5	5	10	5	0	0	1	7	3	2	2	3	1	19	4	7	7	6	2	12	6	3	18	6	12	0	19	0	1	0	0	8	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	8	57	3	3	1	0	0	13	20	6	14	11	19	0	0	3	0	1
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAAA.....................................................................................................................................................	27	1	459.00	459	23	16	1	3	0	0	0	0	0	0	0	0	0	0	3	2	0	1	2	2	0	0	1	0	1	0	1	0	1	5	1	1	0	1	0	0	1	0	0	0	1	0	1	1	0	0	0	0	0	0	1	1	2	1	1	1	1	16	10	0	1	7	0	0	0	37	34	8	4	10	7	1	4	8	1	96	43	48	47
.......................................................................................................................ACTGGAAGAATTCACGGG........................................................................................................................................................	18	1	430.00	430	13	2	7	3	3	11	8	4	6	3	3	0	0	0	2	2	3	1	1	0	19	2	4	9	1	3	7	5	2	5	3	1	0	15	1	0	0	0	3	7	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	4	2	0	2	20	6	5	1	1	0	30	57	21	29	38	49	1	0	1	1	0
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	398.00	398	0	0	381	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	8	3	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	368.00	368	69	20	5	35	2	7	0	3	1	7	2	0	0	0	3	1	1	2	3	1	8	1	11	7	4	2	2	2	1	2	0	13	0	9	0	0	0	0	6	6	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	2	5	1	24	82	0	1	1	2	0	0	1	0	1	0	2	1	0	1	2	3	1
.................................................................................................................AATGGCACTGGAAGAATTCACGGAA.......................................................................................................................................................	25	1	365.00	365	47	46	4	2	0	2	0	0	0	1	0	0	0	0	2	0	1	2	1	5	1	2	7	0	2	0	2	1	1	4	0	2	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	3	0	32	0	0	3	12	0	1	2	17	17	3	21	15	19	14	12	22	0	8	6	13	6
....................................................................................................................GGCACTGGAAGAATTCACGG.........................................................................................................................................................	20	1	336.00	336	7	1	45	2	3	36	14	2	8	15	8	0	0	0	0	3	0	0	0	0	27	0	9	7	4	10	7	3	2	18	5	12	0	26	0	0	0	0	11	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	4	8	0	1	0	0	0	2	4	1	1	0	3	0	0	0	0	2
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTC......................................................................................................................................................	26	1	333.00	333	13	3	5	8	1	17	3	0	0	8	0	0	0	0	0	0	0	1	0	2	16	0	1	0	1	1	2	0	27	42	25	74	0	21	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	5	0	0	1	28	7	1	1	0	2	0	2	3	0	0	2	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTA......................................................................................................................................................	26	1	322.00	322	42	7	5	3	1	2	0	1	0	1	0	0	0	0	6	1	0	6	1	3	2	0	4	0	2	1	4	1	2	9	3	11	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	1	3	1	5	2	11	7	0	3	27	0	1	1	2	3	0	33	16	19	5	17	20	0	3	4	7	7
............................................................................................................................................................CGTGATCTCTTAGTGGCATC.................................................................................................................	20	1	284.00	284	2	4	3	3	1	3	11	0	0	0	0	0	0	0	1	0	0	0	0	2	2	0	0	2	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	1	4	6	3	3	4	1	1	1	7	1	0	0	0	0	0	0	0	0	37	49	19	43	39	26	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	267.00	267	16	12	24	0	0	4	1	3	1	2	0	0	0	0	10	7	3	1	9	6	9	9	8	2	1	2	2	0	3	1	0	10	1	2	0	0	2	0	5	1	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	1	0	0	2	0	19	51	0	0	0	3	3	4	1	2	0	0	2	4	2	2	4	4	3
......................................................................................................................CACTGGAAGAATTCACGG.........................................................................................................................................................	18	1	258.00	258	28	13	3	0	0	4	2	2	4	3	1	0	0	0	0	0	0	0	0	0	11	0	1	1	2	0	2	0	1	5	0	3	0	15	0	0	0	0	7	7	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	8	4	10	11	0	0	0	0	0	0	0	0	0	11	26	14	11	20	20	0	1	1	1	2
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	247.00	247	0	2	176	2	0	1	1	0	2	2	1	0	0	0	0	0	0	0	0	0	0	0	2	2	2	0	1	0	4	3	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	12	10	0	0	0	0	2	4	0	0	0	1	0	4	0	0	1	0	0	0	4	1	1	1
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	242.00	242	4	1	176	2	0	0	0	0	0	4	0	0	0	0	0	1	1	2	0	1	0	1	0	0	1	1	0	0	1	1	1	2	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	1	20	7	0	0	1	0	0	2	0	2	0	2	0	0	1	0	0	0
........................................................................................................................CTGGAAGAATTCACGGG........................................................................................................................................................	17	1	211.00	211	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	2	10	8	3	11	7	7	6	7	45	0	2	0	34	0	0	1	0	2	0	0	0	0	0	0	0	14	13	20	16
....................................................................................................................GGCACTGGAAGAATTCACG..........................................................................................................................................................	19	1	188.00	188	0	0	19	0	10	14	14	3	1	4	2	0	0	0	6	8	6	3	0	1	11	4	3	3	2	2	4	1	1	3	1	7	0	36	0	0	0	0	2	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.................................................................................................................AATGGCACTGGAAGAATTT.............................................................................................................................................................	19	1	180.00	180	5	4	30	0	0	4	0	3	2	5	0	0	0	0	2	2	0	1	1	1	0	1	1	0	0	0	0	0	1	1	1	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	22	89	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGTT........................................................................................................................................................	24	1	168.00	168	2	1	10	0	0	2	2	2	1	1	1	0	0	0	4	1	0	5	3	1	5	2	4	0	0	0	0	0	0	5	1	1	0	6	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	2	0	3	8	84	0	0	0	1	1	1	0	1	0	0	0	0	2	0	0	0	1
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	163.00	163	13	5	107	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	2	2	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	2	4	2	0	0	2	0	0	1	3	2	3	4	1	0	0	0	0	1
.................................................................................................................AATGGCACTGGAAGAAT...............................................................................................................................................................	17	1	162.00	162	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	1	1	1	4	2	7	6	9	8	48	18	0	4	0	9	7	21	0	1	1	0	0	0	0	0	0	0	1	3	1	6
.....................................................................................................................GCACTGGAAGAATTCACG..........................................................................................................................................................	18	1	146.00	146	7	0	13	1	3	13	1	3	0	1	0	0	0	0	1	0	1	0	2	1	4	0	3	9	0	0	1	0	0	3	0	1	0	7	0	0	0	0	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	2	1	0	2	15	8	10	4	8	8	1	0	0	1	2
.................................................................................................................AATGGCACTGGAAGAATTCACGGTC.......................................................................................................................................................	25	1	144.00	144	1	1	2	1	0	6	0	0	0	8	0	0	0	0	2	0	1	0	0	0	13	0	2	0	0	0	0	0	9	13	10	26	0	12	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	1	22	0	6	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	142.00	142	0	0	115	0	0	0	2	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	1	2	6	2	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0
................................................................................................................TAATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	25	1	121.00	121	3	0	61	1	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	4	3	0	2	2	0	1	0	4	1	0	2	1	0	0	0	0	0	4	5	4	2	5	6	0	1	2	0	1
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTCG.....................................................................................................................................................	27	1	120.00	120	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	24	19	8	24	31	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTAA.....................................................................................................................................................	27	1	119.00	119	7	13	2	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	1	2	0	0	0	0	0	0	1	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	8	1	0	2	3	0	0	0	12	18	0	0	4	2	0	1	0	0	7	7	10	6
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	114.00	114	1	1	13	4	1	0	0	1	1	4	0	0	0	0	1	7	1	4	1	1	8	2	1	1	0	0	0	1	0	1	2	1	0	1	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	12	29	0	0	1	0	0	0	1	1	2	0	1	0	0	0	0	0	1
................................................................................................................TAATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	24	1	114.00	114	2	1	36	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	2	2	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	2	0	0	0	2	1	1	0	0	3	4	0	0	0	0	0	0	8	8	5	5	14	7	0	1	0	1	0
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTAA..............................................................................................................	23	1	109.00	109	0	0	1	0	5	0	7	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	19	8	5	15	20	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCT............................................................................................................................................................	20	1	88.00	88	0	0	13	0	0	0	0	2	0	1	0	0	0	0	0	0	1	1	2	0	0	0	1	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	13	50	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACAA.........................................................................................................................................................	23	1	88.00	88	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	1	0	1	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	13	0	0	0	7	9	2	0	0	0	0	0	0	1	6	10	12	14
.................................................................................................................AATGGCACTGGAAGAATTCACGGAAA......................................................................................................................................................	26	1	87.00	87	1	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	1	0	0	0	14	3	1	0	0	1	0	2	0	1	20	7	10	11
........................................................................................................................CTGGAAGAATTCACGG.........................................................................................................................................................	16	1	87.00	87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	1	0	9	6	27	26	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTC...............................................................................................................	22	1	80.00	80	0	0	0	2	9	12	19	0	0	0	0	0	0	0	0	1	0	2	0	0	7	0	2	6	0	0	0	0	0	0	0	0	0	1	0	0	0	0	10	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................ATGGCACTGGAAGAATTC.............................................................................................................................................................	18	1	79.00	79	0	3	70	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGTA.......................................................................................................................................................	25	1	76.00	76	3	1	4	1	1	1	0	0	0	2	0	0	0	0	2	0	2	2	2	4	0	0	1	0	0	0	1	0	0	4	2	1	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	6	18	0	0	1	0	4	0	0	0	0	0	0	0	0	1	2	1	2
.................................................................................................................AATGGCACTGGAAGAATTCACGGTAA......................................................................................................................................................	26	1	68.00	68	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	3	0	1	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	4	0	0	0	5	10	2	0	2	0	0	0	1	1	4	1	8	17

droMoj3

AGCGAG------------------A-AGA-----CC-AGCA-------------GGTGAGTAAGTTTGTT---TTC-GT------TGT-----TT-CGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTC-TA-ACAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATTACGTTCAA----------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	530178.00	530178	42871	20733	3894	7999	377928	76753
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	74673.00	74673	13985	931	860	2218	34049	22630
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	55655.00	55655	11247	775	3507	7838	4699	27589
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	26297.00	26297	5428	111	2522	5567	108	12561
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	21215.00	21215	4970	193	1091	2224	2318	10419
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	11691.00	11691	936	237	212	474	3337	6495
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	6983.00	6983	672	8	723	1613	7	3960
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	6412.00	6412	728	104	130	303	2690	2457
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	5846.00	5846	4385	14	4	9	1374	60
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	4638.00	4638	99	297	16	15	4127	84
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	2368.00	2368	17	22	17	33	2166	113
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	1663.00	1663	180	1	46	105	11	1320
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	1543.00	1543	1416	0	0	3	102	22
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	1467.00	1467	122	18	45	76	687	519
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	1283.00	1283	1244	0	2	4	13	20
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	1092.00	1092	30	18	6	16	933	89
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	583.00	583	569	0	2	4	0	8
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	569.00	569	550	0	0	3	6	10
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	480.00	480	37	6	8	19	266	144
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	434.00	434	19	56	1	7	335	16
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	359.00	359	255	1	0	1	86	16
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	355.00	355	75	0	31	48	11	190
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	346.00	346	34	0	5	22	150	135
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	343.00	343	33	2	22	41	9	236
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	317.00	317	55	2	61	143	20	36
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	184.00	184	5	1	3	6	124	45
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	183.00	183	10	1	4	5	137	26
.................................................................................................................AATGGCACTGGAAGAATTCACGAC........................................................................................................................................................	24	1	156.00	156	0	0	0	0	156	0
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	139.00	139	60	11	1	2	45	20
.................................................................................................................AATGGCACTGGAAGAATTCT............................................................................................................................................................	20	1	136.00	136	17	0	18	33	0	68
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	135.00	135	41	1	2	6	42	43
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	127.00	127	37	4	16	42	3	25
.................................................................................................................AATGGCACTGGAAGAATTT.............................................................................................................................................................	19	1	122.00	122	13	0	13	32	0	64
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	118.00	118	8	0	6	7	28	69
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	116.00	116	96	0	0	0	8	12
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	109.00	109	14	2	20	40	11	22
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	97.00	97	32	0	2	5	26	32
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	91.00	91	81	0	0	0	8	2
...................................................................................................................TGGCACTGGAAGAATTCAC...........................................................................................................................................................	19	1	78.00	78	74	0	0	0	3	1
..................................................................................................................ATGGCACTGGAAGAATTC.............................................................................................................................................................	18	1	76.00	76	71	0	2	0	0	3
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	71.00	71	66	0	0	1	2	2
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	70.00	70	40	2	1	1	13	13
............................................................................................................................................................CGTGATCTCTTAGTGGCATC.................................................................................................................	20	1	69.00	69	0	0	0	1	67	1
................................................................................................................TAATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	25	1	68.00	68	38	0	0	0	29	1
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTA......................................................................................................................................................	26	1	64.00	64	5	0	2	1	25	31
............................................................................................................................................................CGTGATCTCTTAGTGGCATCC................................................................................................................	21	1	54.00	54	0	0	0	0	54	0
...................................................................................................................TGGCACTGGAAGAATTCA............................................................................................................................................................	18	1	47.00	47	45	0	0	1	0	1
.......................................................................................................................ACTGGAAGAATTCACGGG........................................................................................................................................................	18	1	46.00	46	27	4	0	0	10	5
.................................................................................................................AATGGCACTGGAAGAATTCACGGGTC......................................................................................................................................................	26	1	43.00	43	0	0	0	0	19	24
.................................................................................................................AATGGCACTGGAAGAATTCC............................................................................................................................................................	20	1	37.00	37	0	0	22	11	0	4
.................................................................................................................AATGGCACTGGAAGAATTCACCC.........................................................................................................................................................	23	1	37.00	37	7	0	2	2	1	25
.................................................................................................................AATGGCACTGGAAGAATTCAG...........................................................................................................................................................	21	1	33.00	33	1	0	2	3	26	1
.................................................................................................................AATGGCACTGGAAGAATTCACGTT........................................................................................................................................................	24	1	29.00	29	1	1	1	2	13	11
.................................................................................................................AATGGCACTGGAAGAATTCACGGTA.......................................................................................................................................................	25	1	28.00	28	2	0	1	2	7	16
....................................................................................................................GGCACTGGAAGAATTCAC...........................................................................................................................................................	18	1	28.00	28	18	1	1	1	2	5
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	28.00	28	25	0	0	0	1	2
................................................................................................................TAATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	24	1	27.00	27	22	0	0	0	5	0

droGri2

A---------------------------------------------------------------------------------------------------TCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTTAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.................................................................................................................AATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	24	1	7031.00	7031	3469	3562
.................................................................................................................AATGGCACTGGAAGAATTCACG..........................................................................................................................................................	22	1	6212.00	6212	2715	3497
.................................................................................................................AATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	23	1	3970.00	3970	2382	1588
.................................................................................................................AATGGCACTGGAAGAATTCAC...........................................................................................................................................................	21	1	3761.00	3761	1504	2257
.................................................................................................................AATGGCACTGGAAGAATTCA............................................................................................................................................................	20	1	2478.00	2478	743	1735
.................................................................................................................AATGGCACTGGAAGAATTC.............................................................................................................................................................	19	1	685.00	685	155	530
..................................................................................................................ATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	23	1	381.00	381	376	5
..................................................................................................................ATGGCACTGGAAGAATTCACG..........................................................................................................................................................	21	1	298.00	298	295	3
..................................................................................................................ATGGCACTGGAAGAATTCACGG.........................................................................................................................................................	22	1	248.00	248	245	3
.................................................................................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	25	1	199.00	199	82	117
..................................................................................................................ATGGCACTGGAAGAATTCAC...........................................................................................................................................................	20	1	172.00	172	169	3
.................................................................................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	25	1	171.00	171	77	94
..................................................................................................................ATGGCACTGGAAGAATTCA............................................................................................................................................................	19	1	79.00	79	78	1
.................................................................................................................AATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	24	1	72.00	72	27	45
............................................................................................................................................................CGTGATCTCTTAGTGGCATCTA...............................................................................................................	22	1	59.00	59	35	24
.................................................................................................................AATGGCACTGGAAGAATT..............................................................................................................................................................	18	1	57.00	57	50	7
.................................................................................................................AATGGCACTGGAAGAATTCACT..........................................................................................................................................................	22	1	40.00	40	12	28
.................................................................................................................AATGGCACTGGAAGAATTCACGT.........................................................................................................................................................	23	1	38.00	38	15	23
...................................................................................................................TGGCACTGGAAGAATTCACGGG........................................................................................................................................................	22	1	33.00	33	33	0
.................................................................................................................AATGGCACTGGAAGAATTCACA..........................................................................................................................................................	22	1	24.00	24	9	15
.................................................................................................................AATGGCACTGGAAGAATTCACGA.........................................................................................................................................................	23	1	18.00	18	7	11
...................................................................................................................TGGCACTGGAAGAATTCACG..........................................................................................................................................................	20	1	17.00	17	17	0
...................................................................................................................TGGCACTGGAAGAATTCACGG.........................................................................................................................................................	21	1	15.00	15	15	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGGA.......................................................................................................................................................	24	1	14.00	14	14	0
.................................................................................................................AATGGCACTGGAAGAATTCACGC.........................................................................................................................................................	23	1	14.00	14	2	12
..................................................................................................................ATGGCACTGGAAGAATTC.............................................................................................................................................................	18	1	13.00	13	13	0
...................................................................................................................TGGCACTGGAAGAATTCAC...........................................................................................................................................................	19	1	13.00	13	13	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	24	1	12.00	12	11	1
............................................................................................................................................................CGTGATCTCTTAGTGGCATCT................................................................................................................	21	1	10.00	10	4	6
.................................................................................................................AATGGCACTGGAAGAATTCAA...........................................................................................................................................................	21	1	9.00	9	3	6
.................................................................................................................AATGGCACTGGAAGAATTCACGGC........................................................................................................................................................	24	1	9.00	9	4	5
.................................................................................................................AATGGCACTGGAAGAATTCACGGA........................................................................................................................................................	24	1	8.00	8	3	5
.................................................................................................................AATGGCACTGGAAGAATTCACC..........................................................................................................................................................	22	1	8.00	8	3	5
.................................................................................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................................................................................................	25	1	8.00	8	3	5
.................................................................................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................................................................................................	25	1	8.00	8	1	7
....................................................................................................................GGCACTGGAAGAATTCACGGG........................................................................................................................................................	21	1	7.00	7	7	0
................................................................................................................TAATGGCACTGGAAGAATTCACG..........................................................................................................................................................	23	1	6.00	6	6	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................................................................................................	26	1	5.00	5	5	0
................................................................................................................TAATGGCACTGGAAGAATTCACGGG........................................................................................................................................................	25	1	4.00	4	4	0
..................................................................................................................ATGGCACTGGAAGAATTCACGGT........................................................................................................................................................	23	1	4.00	4	4	0
.................................................................................................................AATGGCACTGGAAGAATTT.............................................................................................................................................................	19	1	4.00	4	1	3
...................................................................................................................TGGCACTGGAAGAATTCA............................................................................................................................................................	18	1	4.00	4	4	0
....................................................................................................................GGCACTGGAAGAATTCAC...........................................................................................................................................................	18	1	3.00	3	2	1
.....................................................................................................................GCACTGGAAGAATTCACG..........................................................................................................................................................	18	1	3.00	3	3	0
....................................................................................................................GGCACTGGAAGAATTCACG..........................................................................................................................................................	19	1	2.00	2	2	0
.................................................................................................................AATGGCACTGGAAGAATTCT............................................................................................................................................................	20	1	2.00	2	2	0
.................................................................................................................AATGGCACTGGAAGAATTCACGATT.......................................................................................................................................................	25	1	2.00	2	2	0
.....................................................................................................................GCACTGGAAGAATTCACGGG........................................................................................................................................................	20	1	2.00	2	2	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................................................................................................	25	1	2.00	2	2	0
.............................................................................................................................................................GTGATCTCTTAGTGGCATCTA...............................................................................................................	21	1	2.00	2	2	0
.............................................................................................................................................................GTGATCTCTTAGTGGCATCT................................................................................................................	20	1	2.00	2	2	0
.................................................................................................................AATGGCACTGGAAGAATTCAT...........................................................................................................................................................	21	1	2.00	2	1	1
....................................................................................................................GGCACTGGAAGAATTCACGG.........................................................................................................................................................	20	1	2.00	2	2	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGCA.......................................................................................................................................................	25	1	1.00	1	1	0
................................................................................................................TAATGGCACTGGAAGAATT..............................................................................................................................................................	19	1	1.00	1	1	0
....................................................................................................................GGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	22	1	1.00	1	1	0
................................................................................................................TAATGGCACTGGAAGAATTCACGGGT.......................................................................................................................................................	26	1	1.00	1	1	0
.................................................................................................................AATGGCACTGGAAGAATTCG............................................................................................................................................................	20	1	1.00	1	1	0
.................................................................................................................AATGGCACTGGAAGAATTCACGGAA.......................................................................................................................................................	25	1	1.00	1	1	0

dya-mir-263a

2L:8374834-8374923 -

Known

Unknown

5pUTR

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-35.9	-35.8	-35.8