ID:

dwi_999

 Coordinate:

scf2_1100000004514:2735649-2735799 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-5.6 -5.4 -5.2

Flybase annnotation

exon [dwil_GLEANR_16146:2]; CDS [Dwil\GK15916-cds]; intron [Dwil\GK15916-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
mature
  1. dwi_999  scf2_1100000004514:2735715-2735739 +
  2. scf2_1100000004514:2761749-2761773 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATTGAAAACTGACTGTAGATTAAACTTCTTATTAAAATTACTTTTCTTTTATTAATTAATAACAAAAATTAAAAATAATTACAAAATTTTTTTATGAAACACTCACGTGATTCAAATATTCTGCAATCGGTCAACGTCGAAAAAATTCAATAATTCACAAATCTTTTCTAAATTTATCTTATATTTTCTTTTTCTTTTAGAAAGCCTGTTACAAGGAGCCAAACAGCCAAGCTCGCGTCTGAAGAGCGCC
********************************************************************************...............((((.(((....))).))))..........................************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
........ACTGACTGTAGATTAAACTTCTTA........................................................................................................................................................................................................................... 24 0 1 17.00 17 17 0 0 0
........ACTGACTGTAGATTAAACTTCTTAT.......................................................................................................................................................................................................................... 25 0 1 6.00 6 6 0 0 0
........ACTGACTGTAGATTAAACTTCTTATT......................................................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0
....................................................................................................................ATATTCTGCAATCGGTCAACGTCGA.............................................................................................................. 25 0 2 3.00 6 1 5 0 0
.............................................................................................................................................................................................................................AAACAGCCAAGCTCGCGTCTGAAGAG.... 26 0 1 3.00 3 2 1 0 0
....................................................................................................................ATATTCTGCAATCGGTCAACGTCG............................................................................................................... 24 0 2 2.50 5 5 0 0 0
.............................................................................................................................................................................................................................AAACAGCCAAGCTCGCGTCTGAAG...... 24 0 1 2.00 2 1 1 0 0
....................................................................................................................ATATTCTGCAATCGGTCAACGT................................................................................................................. 22 0 2 1.50 3 3 0 0 0
...............................................................................................................................................................................................................TGTTACAAGGAGCCAAACAGCCAAGC.................. 26 0 2 1.50 3 0 3 0 0
................................................................................TACAAAATTTTTTTATGAAACACTCACG............................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
....................TTAAACTTCTTATTAAAATTACTTTTC............................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................TGTTACAAGGAGCCAAACAGCCAAGCT................. 27 0 2 1.00 2 0 2 0 0
....................................................................................................................................................................................................TTTAGAAAGCCTGTTACA..................................... 18 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................CAAACAGCCAAGCTCGCGTCTGA........ 23 0 2 1.00 2 1 1 0 0
....................................................................................................................................................................................................TTTAGAAAGCCTGTTACAAG................................... 20 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................CAAACAGCCAAGCTCGCGTCTGAAG...... 25 0 1 1.00 1 0 1 0 0
...............................................................................................................................................................................................................................ACAGCCAAGCTCGCGTCTGAAGA..... 23 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................AAGCCTGTTACAAGGAGCCAAAC.......................... 23 0 1 1.00 1 1 0 0 0
...TGAAAACTGACTGTAGATTAAACT................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................................AGCTCGCGTCTGAAGAGCGCC 21 0 1 1.00 1 1 0 0 0
.....................................................................................................................TATTCTGCAATCGGTCAACGTCGA.............................................................................................................. 24 0 2 1.00 2 1 0 1 0
.........CTGACTGTAGATTAAACTTCTTA........................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................CAAACAGCCAAGCTCGCGTCTGAAGAGCG.. 29 0 1 1.00 1 0 1 0 0
......................................................................................................................................................................................................TAGAAAGCCTGTTACAAGGAGCCAAA........................... 26 0 1 1.00 1 0 0 1 0
............................................................................................................................................................................................................................CAAACAGCCAAGCTCGCGTCTGAAGAG.... 27 0 1 1.00 1 0 1 0 0
................................................................................................................................................AATTCAATAATTCACAAATCTTT.................................................................................... 23 0 2 0.50 1 1 0 0 0
......................................................................................................................ATTCTGCAATCGGTCAACGTC................................................................................................................ 21 0 2 0.50 1 1 0 0 0
.................................................................................................................................................................................................................TTACAAGGAGCCAAACAGCCAAGCTCG............... 27 0 2 0.50 1 1 0 0 0
...............................................................................................................................................................................................................TGTTACAAGGAGCCAAACAGCCAAG................... 25 0 2 0.50 1 0 1 0 0
..........................................................................................................CGTGATTCAAATATTCTGCAATCGG........................................................................................................................ 25 0 2 0.50 1 1 0 0 0
........................................................................................................................................................................................................................GAGCCAAACAGCCAAGCTCGCGT............ 23 0 2 0.50 1 1 0 0 0
....................................................................................................................ATATTCTGCAATCGGTCAACGTC................................................................................................................ 23 0 2 0.50 1 1 0 0 0
............................................................................................................................CAATCGGTCAACGTCGAAAAAAT........................................................................................................ 23 0 2 0.50 1 1 0 0 0
.............................................................................................................................................................................................................................AAACAGCCAAGCTCGCGTCTGAA....... 23 0 2 0.50 1 1 0 0 0
............................................................................................................................................................................................................GCCTGTTACAAGGAGCCAAACAGC....................... 24 0 2 0.50 1 1 0 0 0
..................................................................................................................................................................................................................TACAAGGAGCCAAACAGCCAAGC.................. 23 0 2 0.50 1 0 1 0 0
.............................................................................................................................................................................................................................AAACAGCCAAGCTCGCGTCTGAATAGC... 27 1 2 0.50 1 1 0 0 0
.................................................................................................................................................................................................................TTACAAGGAGCCAAACAGCC...................... 20 0 2 0.50 1 0 1 0 0
.....................................................................................................................TATTCTGCAATCGGTCAACGTCGAAAA........................................................................................................... 27 0 2 0.50 1 1 0 0 0
..........................................................................................TTTTATGAAACACTCACGTGAT........................................................................................................................................... 22 0 2 0.50 1 1 0 0 0
..................................................................................................................AAATATTCTGCAATCGGTCAACGTCGA.............................................................................................................. 27 0 2 0.50 1 1 0 0 0
....................................................................................................................ATGTTCTGCAATCGGTCAACGTCG............................................................................................................... 24 1 2 0.50 1 1 0 0 0
...........................................................................................................................................................................................................................CCAAACAGCCAAGCTCGCGTCTGA........ 24 0 2 0.50 1 1 0 0 0
..................................................................................................................................................................................................................TACAAGGAGCCAAACAGCCAAGCT................. 24 0 2 0.50 1 1 0 0 0
..................................................................................................................................................................................................................TACAAGGAGCCAAACAGCCAAGCTCGCG............. 28 0 2 0.50 1 1 0 0 0
.............................................................................................................................................................................................................................AAACAGCCAAGCTCGCGTCTGA........ 22 0 2 0.50 1 1 0 0 0
......................................................................................................................................................ATAATTCACAAATCTTTTCTAAATT............................................................................ 25 0 2 0.50 1 1 0 0 0
.............................................................................................................GATTCAAATATTCTGCAATCGGTCAACG.................................................................................................................. 28 0 2 0.50 1 1 0 0 0
....................................................................................................................ATATTCTGCAATCGGTCAACGTCGAA............................................................................................................. 26 0 2 0.50 1 0 1 0 0
....................................................................................................................ATATTCTGCAATCGGTCAACGTCGAAA............................................................................................................ 27 0 2 0.50 1 1 0 0 0
.........................................................................................................ACGTGATTCAAATATTCTGCA............................................................................................................................. 21 0 2 0.50 1 0 1 0 0
....................................................................................................................ATATTCTGCAATCGGTAAACGTCGA.............................................................................................................. 25 1 2 0.50 1 0 1 0 0
................................................................................................................................................AATTCAATAATTCACAAATCTT..................................................................................... 22 0 2 0.50 1 1 0 0 0
..........................................................................................................................TGCAATCGGTCAACGTCGAAAAAATTCA..................................................................................................... 28 0 2 0.50 1 0 1 0 0
...............................................................................................................................................AAATTCAATAATTCACAAATCTT..................................................................................... 23 0 2 0.50 1 1 0 0 0
........................................................................................................................................................................................................................GAGCCAAACAGCCAAGCTCGCG............. 22 0 2 0.50 1 1 0 0 0
......................................................................................................................ATCCCGCAATCGGTCAAGGT................................................................................................................. 20 3 4 0.25 1 1 0 0 0
........................................................................................................................TCTTCAATCGGACAACGGC................................................................................................................ 19 3 20 0.05 1 0 0 0 1
........................................................................................................................CCCGCAATCGGTCAAGGT................................................................................................................. 18 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

TTAACTTTTGACTGACATCTAATTTGAAGAATAATTTTAATGAAAAGAAAATAATTAATTATTGTTTTTAATTTTTATTAATGTTTTAAAAAAATACTTTGTGAGTGCACTAAGTTTATAAGACGTTAGCCAGTTGCAGCTTTTTTAAGTTATTAAGTGTTTAGAAAAGATTTAAATAGAATATAAAAGAAAAAGAAAATCTTTCGGACAATGTTCCTCGGTTTGTCGGTTCGAGCGCAGACTTCTCGCGG
**************************************************************************************************************...............((((.(((....))).))))..........................******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 M020
head
 V117
male body		 V119
head
...................................................................................................TGTGAGTGCACTAAGTTTATAAGACGT............................................................................................................................. 27 0 2 312.00 624 475 141 0 7 1
.................................................................................................................................................TAAGTTATTAAGTGTTTAGAAAAGAT................................................................................ 26 0 2 77.00 154 141 12 0 1 0
..................................................................................................TTGTGAGTGCACTAAGTTTATAAGACGT............................................................................................................................. 28 0 2 73.00 146 85 48 9 4 0
................................................................................................................................................TTAAGTTATTAAGTGTTTAGAAAAGAT................................................................................ 27 0 2 45.50 91 71 20 0 0 0
...........................................................................................................................................................................................................TCGGACAATGTTCCTCGGTTTGTCGGT..................... 27 0 1 45.00 45 9 35 1 0 0
....................................................................................................GTGAGTGCACTAAGTTTATAAGACGT............................................................................................................................. 26 0 2 40.00 80 25 55 0 0 0
..............................................................................................................................TAGCCAGTTGCAGCTTTTTTAAGTTAT.................................................................................................. 27 0 2 39.00 78 19 59 0 0 0
.............................................................................................................................................................TGTTTAGAAAAGATTTAAATAGAAT..................................................................... 25 0 2 31.50 63 59 3 0 1 0
...............................................................................................................................AGCCAGTTGCAGCTTTTTTAAGTTAT.................................................................................................. 26 0 2 30.50 61 13 45 2 1 0
......TTTGACTGACATCTAATTTGAAGAAT........................................................................................................................................................................................................................... 26 0 1 28.00 28 19 9 0 0 0
..............................................................................................................................................................................................................GACAATGTTCCTCGGTTTGTCGGTT.................... 25 0 2 22.00 44 9 35 0 0 0
.............................................................................................................................................................TGTTTAGAAAAGATTTAAATAGAATAT................................................................... 27 0 2 21.50 43 42 1 0 0 0
...........................................................................................................................................................................................................TCGGACAATGTTCCTCGGTTTGTCGGTT.................... 28 0 1 21.00 21 0 21 0 0 0
..........................................................................................................GCACTAAGTTTATAAGACGTTAGCCAGT..................................................................................................................... 28 0 2 20.50 41 0 41 0 0 0
........................................................................................................................................................................................................................CTCGGTTTGTCGGTTCGAGCGCAG........... 24 0 2 20.00 40 13 26 1 0 0
............................................................................................................................................................................................................CGGACAATGTTCCTCGGTTTGTCGGT..................... 26 0 2 20.00 40 9 31 0 0 0
.......................................................................................................................................................................................................................CCTCGGTTTGTCGGTTCGAGCGCAG........... 25 0 2 17.50 35 1 32 2 0 0
..............................................................................................................................................................................................................................TTGTCGGTTCGAGCGCAGACTTCT..... 24 0 1 17.00 17 5 12 0 0 0
.......TTGACTGACATCTAATTTGAAGAAT........................................................................................................................................................................................................................... 25 0 1 15.00 15 13 2 0 0 0
.......TTGACTGACATCTAATTTGAAGAATAAT........................................................................................................................................................................................................................ 28 0 1 14.00 14 7 7 0 0 0
..........................................................................................................................................................................................................TTCGGACAATGTTCCTCGGTTTGTCGGT..................... 28 0 1 14.00 14 1 12 0 1 0
......................................................................................................GAGTGCACTAAGTTTATAAGACGT............................................................................................................................. 24 0 2 12.00 24 12 9 2 1 0
..............................................................................................................................TAGCCAGTTGCAGCTTTTTTAAGT..................................................................................................... 24 0 2 11.50 23 5 18 0 0 0
.........................................................................................................................................................TAAGTGTTTAGAAAAGATTTAAAT.......................................................................... 24 0 2 11.50 23 20 2 0 0 1
..................................................................................................TTGTGAGTGCACTAAGTTTATAA.................................................................................................................................. 23 0 2 11.00 22 20 2 0 0 0
.....................................................................................................TGAGTGCACTAAGTTTATAAGACGT............................................................................................................................. 25 0 2 10.00 20 15 5 0 0 0
......................................................................................................................................................................................................................TCCTCGGTTTGTCGGTTCGAGCGCAG........... 26 0 2 10.00 20 4 16 0 0 0
..................CTAATTTGAAGAATAATTTTAAT.................................................................................................................................................................................................................. 23 0 1 10.00 10 7 3 0 0 0
.................................................................................................................................................TAAGTTATTAAGTGTTTAGAAAAGATT............................................................................... 27 0 2 10.00 20 19 1 0 0 0
......................................AATGAAAAGAAAATAATTAATTATTGT.......................................................................................................................................................................................... 27 0 2 10.00 20 20 0 0 0 0
....................................................................................................................................................................................................................GTTCCTCGGTTTGTCGGTTCGAGCGCAG........... 28 0 2 8.00 16 0 16 0 0 0
...............................................................................................................................................................................................................................TGTCGGTTCGAGCGCAGACTTCTCGC.. 26 0 1 8.00 8 4 4 0 0 0
............................................................................................................................GTTAGCCAGTTGCAGCTTTTTTAAGT..................................................................................................... 26 0 2 7.50 15 5 10 0 0 0
........................................................................................................................................................................................AAAAGAAAAAGAAAATCTTTCGGACAAT....................................... 28 0 1 7.00 7 2 5 0 0 0
.............................................................................................................................................................................................................................TTTGTCGGTTCGAGCGCAGACTTCT..... 25 0 1 7.00 7 1 6 0 0 0
..........................................................................................................................................................................................................................CGGTTTGTCGGTTCGAGCGCAGACTTCT..... 28 0 1 7.00 7 0 7 0 0 0
...............................................................................................................................................................................................................................TGTCGGTTCGAGCGCAGACTTCT..... 23 0 1 7.00 7 6 1 0 0 0
............................................................................................................................................................................................................CGGACAATGTTCCTCGGTTTGTCGGTT.................... 27 0 2 7.00 14 2 12 0 0 0
...........................................................................................................................................................................................................................GGTTTGTCGGTTCGAGCGCAGACTTCT..... 27 0 1 7.00 7 0 7 0 0 0
...................................................................................................TGTGAGTGCACTAAGTTTATAAGACG.............................................................................................................................. 26 0 2 7.00 14 1 13 0 0 0
......................................................................................................................................TGCAGCTTTTTTAAGTTATTAAGTGT........................................................................................... 26 0 2 6.50 13 3 10 0 0 0
........................................................................................................................................................................................................CTTTCGGACAATGTTCCTCGGTTTGT......................... 26 0 1 6.00 6 1 5 0 0 0
..................................................................................................TTGTGAGTGCACTAAGTTTATAAG................................................................................................................................. 24 0 2 6.00 12 11 1 0 0 0
................................................................................................................................................................................................................................GTCGGTTCGAGCGCAGACTTCTCGC.. 25 0 1 6.00 6 0 6 0 0 0
................................................................................................................................GCCAGTTGCAGCTTTTTTAAGTTAT.................................................................................................. 25 0 2 6.00 12 3 9 0 0 0
..............................................................................................................................TAGCCAGTTGCAGCTTTTTTAAGTTATT................................................................................................. 28 0 2 5.50 11 1 10 0 0 0
..............................................................................................................................................................................................................GACAATGTTCCTCGGTTTGTCGGT..................... 24 0 2 5.50 11 0 11 0 0 0
.........................................................................................................................................................................................................................TCGGTTTGTCGGTTCGAGCGCAG........... 23 0 2 5.00 10 4 6 0 0 0
................................................................................................................................................................TTAGAAAAGATTTAAATAGAATAT................................................................... 24 0 2 5.00 10 6 4 0 0 0
...........................................................................................................................................................................................................TCGGACAATGTTCCTCGGTTTGTCGG...................... 26 0 1 5.00 5 0 5 0 0 0
........TGACTGACATCTAATTTGAAGAATAAT........................................................................................................................................................................................................................ 27 0 1 5.00 5 3 2 0 0 0
..........................................................................................................GCACTAAGTTTATAAGACGTTAGCCA....................................................................................................................... 26 0 2 5.00 10 0 10 0 0 0
...............................................................................................................................AGCCAGTTGCAGCTTTTTTAAGTTATT................................................................................................. 27 0 2 4.50 9 0 9 0 0 0
..............................................................................................................................................................GTTTAGAAAAGATTTAAATAGAAT..................................................................... 24 0 2 4.50 9 7 2 0 0 0
....................................................................................................................................................................................................................GTTCCTCGGTTTGTCGGTTCGAGC............... 24 0 2 4.50 9 0 9 0 0 0
...............................................................................................................................................................................................................ACAATGTTCCTCGGTTTGTCGGT..................... 23 0 2 4.50 9 1 8 0 0 0
...........................................................................................................................CGTTAGCCAGTTGCAGCTTTTTTAAGT..................................................................................................... 27 0 2 4.50 9 8 1 0 0 0
...................................................................................................................TTATAAGACGTTAGCCAGTTGCAGC............................................................................................................... 25 0 2 4.00 8 1 7 0 0 0
...........................................................................................................................................................................................................................GGTTTGTCGGTTCGAGCGCAGACTT....... 25 0 2 4.00 8 3 5 0 0 0
...................................................................................................................TTATAAGACGTTAGCCAGTTGCAGCT.............................................................................................................. 26 0 2 4.00 8 3 5 0 0 0
...................................................................................................................TTATAAGACGTTAGCCAGTTGCAGCTT............................................................................................................. 27 0 2 4.00 8 3 5 0 0 0
...............................................................................................ACTTTGTGAGTGCACTAAGTTTAT.................................................................................................................................... 24 0 2 3.50 7 2 5 0 0 0
..............................................................................................................TAAGTTTATAAGACGTTAGCCAGT..................................................................................................................... 24 0 2 3.50 7 7 0 0 0 0
...............................................................................................................................................................................................................ACAATGTTCCTCGGTTTGTCGGTT.................... 24 0 2 3.50 7 2 5 0 0 0
..........................................................................................................................................................................................................................CGGTTTGTCGGTTCGAGCGCAGACTT....... 26 0 2 3.50 7 2 5 0 0 0
..........................................................................................................GCACTAAGTTTATAAGACGTTAGCCAG...................................................................................................................... 27 0 2 3.50 7 1 6 0 0 0
....................................................................................................................................................................................................................GTTCCTCGGTTTGTCGGTTCGAGCGC............. 26 0 2 3.50 7 0 7 0 0 0
.............................................................................................................................................................................................................GGACAATGTTCCTCGGTTTGTCGGT..................... 25 0 2 3.00 6 0 6 0 0 0
..........................................................................................................................................................................................................................CGGTTTGTCGGTTCGAGCGCAGACT........ 25 0 2 3.00 6 1 5 0 0 0
.....................................................................................................................................................................................................................TTCCTCGGTTTGTCGGTTCGAGCGCAG........... 27 0 2 3.00 6 1 5 0 0 0
............................................................................................................................................................................................GAAAAAGAAAATCTTTCGGACAATGT..................................... 26 0 1 3.00 3 3 0 0 0 0
..........................................................................................................................................................................................................TTCGGACAATGTTCCTCGGTTTGTCGG...................... 27 0 1 3.00 3 0 3 0 0 0
............................................................................................................................................................GTGTTTAGAAAAGATTTAAATAGAAT..................................................................... 26 0 2 3.00 6 5 1 0 0 0
...................................TTTAATGAAAAGAAAATAATTAATTAT............................................................................................................................................................................................. 27 0 2 3.00 6 4 2 0 0 0
............................................................................................................................................................................................................................GTTTGTCGGTTCGAGCGCAGACTTCT..... 26 0 1 3.00 3 1 2 0 0 0
..............................................................................................................................................................................................................................TTGTCGGTTCGAGCGCAGACTTCTCGC.. 27 0 1 3.00 3 0 3 0 0 0
.........GACTGACATCTAATTTGAAGAATAAT........................................................................................................................................................................................................................ 26 0 1 3.00 3 2 1 0 0 0
...........................................................................................................................................................................................................................GGTTTGTCGGTTCGAGCGCAGACTTC...... 26 0 1 3.00 3 0 3 0 0 0
....................................................................................................GTGAGTGCACTAAGTTTATAAGACG.............................................................................................................................. 25 0 2 3.00 6 0 6 0 0 0
..............................................................................................................................TAGCCAGTTGCAGCTTTTTTAAGTTA................................................................................................... 26 0 2 2.50 5 0 5 0 0 0
................................................................................................................................................................................................................CAATGTTCCTCGGTTTGTCGGTT.................... 23 0 2 2.50 5 3 2 0 0 0
..............................................................................................................................................................GTTTAGAAAAGATTTAAATAGAATAT................................................................... 26 0 2 2.50 5 0 5 0 0 0
.................................................................................................................................................TAAGTTATTAAGTGTTTAGAAAAGATTT.............................................................................. 28 0 2 2.50 5 5 0 0 0 0
................................................................................................................................GCCAGTTGCAGCTTTTTTAAGTTATT................................................................................................. 26 0 2 2.50 5 1 4 0 0 0
....................................................................................................................................................................................................................GTTCCTCGGTTTGTCGGTTCGAGCG.............. 25 0 2 2.50 5 0 5 0 0 0
............................................................................................................................................................................................................CGGACAATGTTCCTCGGTTTGTCGG...................... 25 0 2 2.50 5 0 5 0 0 0
...............................................................................................................................AGCCAGTTGCAGCTTTTTTAAGTTA................................................................................................... 25 0 2 2.50 5 0 5 0 0 0
....................................................................................................................................GTTGCAGCTTTTTTAAGTTATTAAGT............................................................................................. 26 0 2 2.00 4 0 4 0 0 0
........................................................................TTTTATTAATGTTTTAAAAAAATACTT........................................................................................................................................................ 27 0 1 2.00 2 0 2 0 0 0
.................................................................................................................................................TAAGTTATTAAGTGTTTAGAAAAGA................................................................................. 25 0 2 2.00 4 2 2 0 0 0
..................................................................................................TTGTGAGTGCACTAAGTTTATAAGA................................................................................................................................ 25 0 2 2.00 4 4 0 0 0 0
.....ATTTGACTGACATCTAATTTGAAGAAT........................................................................................................................................................................................................................... 27 1 1 2.00 2 2 0 0 0 0
....................................................................................................................................................................................................AAATCTTTCGGACAATGTTCCTCGGT............................. 26 0 1 2.00 2 1 1 0 0 0
.............GACATCTAATTTGAAGAATAATTTTAAT.................................................................................................................................................................................................................. 28 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................................................CGGTTTGTCGGTTCGAGCGCAG........... 22 0 2 2.00 4 2 2 0 0 0
..........................................................................................................................................................................................AAGAAAAAGAAAATCTTTCGGACAAT....................................... 26 0 1 2.00 2 1 1 0 0 0
..................................................................................................TTGTGAGTGCACTAAGTTTATAAGAC............................................................................................................................... 26 0 2 2.00 4 0 4 0 0 0
...........................................................................................................................................................................................................................GGTTTGTCGGTTCGAGCGCAG........... 21 0 2 2.00 4 0 4 0 0 0
.........................................................................................................................................................................................AAAGAAAAAGAAAATCTTTCGGACAAT....................................... 27 0 1 2.00 2 1 1 0 0 0
........TGACTGACATCTAATTTGAAGAAT........................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
..............................................................................................................................................................................................................................TTGTCGGTTCGAGCGCAGACTTC...... 23 0 1 2.00 2 0 2 0 0 0
...................................................................................................................TTATAAGACGTTAGCCAGTTGCAGCTTTT........................................................................................................... 29 0 2 2.00 4 0 4 0 0 0
.....................................................................................TTAAAAAAATACTTTGTGAGTGCACT............................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0
.....AATTGACTGACATCTAATTTGAAGAAT........................................................................................................................................................................................................................... 27 2 1 2.00 2 2 0 0 0 0
..............................................................................................................................................................................................................................TTGTCGGTTCGAGCGCAGACTTCTC.... 25 0 1 2.00 2 2 0 0 0 0
.............................................................................................................CTAAGTTTATAAGACGTTAGCCAGT..................................................................................................................... 25 0 2 2.00 4 1 3 0 0 0
........TGACTGACATCTAATTTGAAGAATAA......................................................................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0
......TTTGACTGACATCTAATTTGAAGAA............................................................................................................................................................................................................................ 25 0 1 2.00 2 1 1 0 0 0
...............................................................................................................................AGCCAGTTGCAGCTTTTTTAAGT..................................................................................................... 23 0 2 2.00 4 0 4 0 0 0
...................................................................................................TGTGACTGCACTAAGTTTATAAGACGT............................................................................................................................. 27 1 2 1.50 3 3 0 0 0 0
..................................................................................................................TTTATAAGACGTTAGCCAGTTGCAGC............................................................................................................... 26 0 2 1.50 3 1 2 0 0 0
...........................................................................................................................................................................................................................GGTTTGTCGGTTCGAGCGCAGACT........ 24 0 2 1.50 3 0 3 0 0 0
....................................................................................................................................GTTGCAGCTTTTTTAAGTTATTAAGTGT........................................................................................... 28 0 2 1.50 3 0 3 0 0 0
.....................................................................................................................................TTGCAGCTTTTTTAAGTTATTAAGT............................................................................................. 25 0 2 1.50 3 2 1 0 0 0
..............................................................................................................TAAGTTTATAAGACGTTAGCCAGTT.................................................................................................................... 25 0 2 1.50 3 2 1 0 0 0
..........................................................................................................................ACGTTAGCCAGTTGCAGCTTTTTTAAGT..................................................................................................... 28 0 2 1.50 3 0 3 0 0 0
.................................................................................................................................CCAGTTGCAGCTTTTTTAAGTTAT.................................................................................................. 24 0 2 1.50 3 1 2 0 0 0
..............................................................................................................................TAGCCAGTTGCAGCTTTT........................................................................................................... 18 0 2 1.50 3 0 3 0 0 0
........................................................................................................................................................................................................................CTCGGTTTGTCGGTTCGAGCGCAGAC......... 26 0 2 1.50 3 1 2 0 0 0
..................................................................................................................TTTATAAGACGTTAGCCAGTTGCAGCT.............................................................................................................. 27 0 2 1.50 3 3 0 0 0 0
.................................................................................................TTTGTGAGTGCACTAAGTTTATAAG................................................................................................................................. 25 0 2 1.50 3 3 0 0 0 0
..........................................................................................................................................................................................................................CGGTTTGTCGGTTCGAGCGCAGAC......... 24 0 2 1.50 3 1 2 0 0 0
...................................................................................................TGTGAGTGCACTAAGGTTATAAGACGT............................................................................................................................. 27 1 2 1.50 3 0 3 0 0 0
.............................................................................................................................................................TGTTTAGAAAAGATTTAAATAGAATA.................................................................... 26 0 2 1.50 3 3 0 0 0 0
.................................................................................................TTTGTGAGTGCACTAAGTTTATAA.................................................................................................................................. 24 0 2 1.50 3 2 0 0 0 1
...............................................................................................................................................................................................................ACAATGTTCCTCGGTTTGTCGGTTCG.................. 26 0 2 1.50 3 0 3 0 0 0
.................................................................................................................................................................................AGAATATAAAAGAAAAAGAAAATCTT................................................ 26 0 2 1.50 3 1 2 0 0 0
.....................................................................................................................ATAAGACGTTAGCCAGTTGCAGCTTTT........................................................................................................... 27 0 2 1.00 2 0 2 0 0 0
..........................................................................................................................................................................................................TTCGGACAATGTTCCTCGGTTTGTCG....................... 26 0 1 1.00 1 0 1 0 0 0
..................................................................................................TTGTGAGTGCACTAAGTTTATAAGACG.............................................................................................................................. 27 0 2 1.00 2 0 2 0 0 0
........................................................................................................................................................................................AAAAGAAAAAGAAAATCTTTCGGACAA........................................ 27 0 1 1.00 1 1 0 0 0 0
...................................................................................................TGTGAGTGCACTAAGTTTATAAG................................................................................................................................. 23 0 2 1.00 2 0 2 0 0 0
...................................................................................................TGTGAGTGCACTAAGTTTATAAGACGC............................................................................................................................. 27 1 2 1.00 2 2 0 0 0 0
................................................................................................................................................................................................AAGAAAATCTTTCGGACAATGTTCCT................................. 26 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................................ATCGGACAATGTTCCTCGGTTTGTCGGT..................... 28 1 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................................................................TTTGTCGGTTCGAGCGCAGACTTCTC.... 26 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................................................................................CCTCGGTTTGTCGGTTCGAGCGC............. 23 0 2 1.00 2 0 2 0 0 0
......................................................................................................GAGTGCACTAAGTTTATAAGACGTT............................................................................................................................ 25 0 2 1.00 2 0 2 0 0 0
.....TTTTGACTGGCATCTAATTTGAAGAAT........................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................GTCGGTTCGAGCGCAGACTTCT..... 22 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................................TTGTCGGTTCGAGCGAAGACTTCTCGC.. 27 1 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................TTTCGGTTCGAGCGCAGACTTCT..... 23 1 1 1.00 1 0 1 0 0 0
....................................................................................................................TATAAGACGTTAGCCAGTTGCAGCTTTT........................................................................................................... 28 0 2 1.00 2 0 2 0 0 0
.................................................................................................................................................................................................................................TCGGTTCGAGCGCAGACTTCT..... 21 0 1 1.00 1 1 0 0 0 0
.............GACATCTAATTTGAAGAA............................................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0
........................................................................TTTTATTAATGTTTTAAAAAAATACT......................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................................TTGTCGGTTCGAGCGCAGACTTCTCG... 26 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................TGTTTAGAAAAGATTTAAATAGAA...................................................................... 24 0 2 1.00 2 1 1 0 0 0
................................................................................................................................................TTAAGTTATTAAGTGTTTAGAAAAGA................................................................................. 26 0 2 1.00 2 1 1 0 0 0
...........................................................................................................................................................................................................TCGGACAATGTTCCTGGGTTTGTCGGT..................... 27 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................GGTTTGTCGGTTCGAGCGCAGAC......... 23 0 2 1.00 2 1 1 0 0 0
...................................................................................................TGCGAGTGCACTAAGTTTATAAGACGT............................................................................................................................. 27 1 2 1.00 2 2 0 0 0 0
....CTTTTGACTGACATCTAATTTGAAGAAT........................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................GGTTCGAGCGCAGACTTCTCGCGG 24 0 1 1.00 1 0 1 0 0 0
............................................................................................................................GTTAGCCAGTTGCAGCTTTTTTAAGTTAT.................................................................................................. 29 0 2 1.00 2 0 2 0 0 0
.......TTGACTGACATCTAATTTGAAGAATAA......................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................GGTTTGTCGGTTCGAGCGCAGA.......... 22 0 2 1.00 2 0 2 0 0 0
.......TTGACTGACATCTAATTTGAAAAAT........................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................TTTGTCGGTTCGAGCGCAGACTTCTCGC.. 28 0 1 1.00 1 0 1 0 0 0
.......TTGACTGACATCTAACTTGAAGAATAAT........................................................................................................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0
..................CTAATTTGAAGAATAATTTT..................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................ATGTCGGTTCGAGCGCAGACTTCTCGC.. 27 1 1 1.00 1 0 1 0 0 0
...................................................................................................TGTGGGTGCACTAAGTTTATAAGACGT............................................................................................................................. 27 1 2 1.00 2 2 0 0 0 0
.........................................................................................................................................................................................................TTTCGGATAATGTTCCTCGGTTTGT......................... 25 1 1 1.00 1 0 1 0 0 0
.................................................................................................................................CCAGTTGCAGCTTTTTTAAGTTATTAAGT............................................................................................. 29 0 2 1.00 2 0 2 0 0 0
...........................................................................................................................................................AGTGTTTAGAAAAGATTTAAATAGAAT..................................................................... 27 0 2 1.00 2 2 0 0 0 0
...............................................................................................................................................TTTAAGTTATTAAGTGTTTAGAAAAGATT............................................................................... 29 0 2 1.00 2 0 2 0 0 0
..................................................................................................................................................................................................GAAAATCTTTCGGACAATG...................................... 19 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................AAAATCTTTCGGACAATGTTCCTCGGT............................. 27 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................TTTGTCGGTTCGAGCGCAGACTTCC..... 25 1 1 1.00 1 1 0 0 0 0
........TGACTGACATCTAATTTGAAGAATAATT....................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.......TTGACTGACATCTAATTTGAAGAA............................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................TAGCCAGTTGCAGCTTTTTTAA....................................................................................................... 22 0 2 1.00 2 0 2 0 0 0
..............................................................................................................................TAGCCAGTTGCAGCTTTTTTAAG...................................................................................................... 23 0 2 1.00 2 0 2 0 0 0
..................................................................................................................................................................................................GAAAATCTTTCGGACAATGTTCCTCGGT............................. 28 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................TGCAGCTTTTTTAAGTTATTAAGT............................................................................................. 24 0 2 1.00 2 0 2 0 0 0
.................................................................................................................................CCAGTTGCAGCTTTTTTAAGTTATT................................................................................................. 25 0 2 1.00 2 0 2 0 0 0
......TTTGACTGACATCTAATTTGAAGAATAA......................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................TGTCGGTTCGAGCGCAGACTTCTCG... 25 0 1 1.00 1 0 1 0 0 0
..............................................................................TAATGTTTTAAAAAAATACTTTGTG.................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..........................................................................................................GCACTAAGTTTATAAGACGTTAGCC........................................................................................................................ 25 0 2 1.00 2 0 2 0 0 0
..............................................................................TAATGTTTTAAAAAAATACTTTGTGAGT................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
......TTTGACTCACATCTAATTTGAAGAATA.......................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
....................................................................................................................TATAAGACGTTAGCCAGTTGCAGC............................................................................................................... 24 0 2 1.00 2 0 2 0 0 0
...........................................................................................................................................................................................................TCGGACAATGTTCCTCGGTTTGTCG....................... 25 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................CCGGACAATGTTCCTCGGTTTGTCGGT..................... 27 1 2 1.00 2 0 1 1 0 0
.........................................................................TTTATTAATGTTTTAAAAAAATACTTTG...................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................AGAAAAAGAAAATCTTTCGGACAATGT..................................... 27 0 1 1.00 1 1 0 0 0 0
...................................................................................................TGTGATTGCACTAAGTTTATAAGACGT............................................................................................................................. 27 1 2 1.00 2 1 1 0 0 0
...........................................................................................................................................................................................................TCGGACAATGTTCCGCGGTTTGTCGG...................... 26 1 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................GACAATGTTCCTCGGTTTGTCGG...................... 23 0 2 1.00 2 0 2 0 0 0
....................................................................................................................................................................................................AAATCTTTCGGACAATGTTCCTCGGTT............................ 27 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................................CTCGGTTTGTCGGTTCGAGCGCAGA.......... 25 0 2 1.00 2 2 0 0 0 0
.................................................................................................................................CCAGTTGCAGCTTTTTTAAGTTATTAAG.............................................................................................. 28 0 2 1.00 2 0 2 0 0 0
.................................................................................................TTTGTGAGTGCACTAAGTTTAT.................................................................................................................................... 22 0 2 1.00 2 2 0 0 0 0
........................................................................TTTTATTAATGTTTTAAAAAAATACTTA....................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0
......................................................................................................................................TGCAGCTTTTTTAAGTTATTAAG.............................................................................................. 23 0 2 1.00 2 0 2 0 0 0
.....................................................................................................................................................................................................AATCTTTCGGACAATGTTCCTCGGTTT........................... 27 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................TTAAGTTATTAAGTGTTTAGAAAAGATTT.............................................................................. 29 0 2 1.00 2 0 2 0 0 0
.............................................................................................................................................................................................................................TTTGTCGGTTCGAGCGCAGACTT....... 23 0 2 1.00 2 2 0 0 0 0
........................................................................................................................................................................................................................CTCGGTTTGTCGGTTCGAGCGCAGACTT....... 28 0 2 1.00 2 0 2 0 0 0
.......................................................................................................................AAGACGTTAGCCAGTTGCAGCTTTTT.......................................................................................................... 26 0 2 1.00 2 1 1 0 0 0
...........................................................................................................................................................................................................TCGGACAATGTTCCTCGGTTTGT......................... 23 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................TTTAAGTTATTAAGTGTTTAGAAAAGAT................................................................................ 28 0 2 1.00 2 1 1 0 0 0
............................................................................................................................................................................................GAAAAAGAAAATCTTTCGGACAATGTT.................................... 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................AGCCAGTTGCAGCTTTTT.......................................................................................................... 18 0 2 1.00 2 0 2 0 0 0
...................................................................................................................................................................................................AAAATCTTTCGGACAATGTTCCTCG............................... 25 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................TATTAAGTGTTTAGAAAAGATTTAAAT.......................................................................... 27 0 2 1.00 2 2 0 0 0 0
..................................................................................................................................................................................................GAAAATCTTTCGGACAATGT..................................... 20 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................TTGCAGCTTTTTTAAGTTATTAAGTGT........................................................................................... 27 0 2 1.00 2 1 1 0 0 0
.......TTGACTGACATCTAATTTGAAGAATAATT....................................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................CTTTCGGACAATGTTCCTCGGTTTG.......................... 25 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................................TTGTCGGTTCGAACGCAGACTTCTC.... 25 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................AGAAGAAAAAGTAAATCTTTCGGACAAT....................................... 28 2 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................AAGAAAAAGAAAATCTTTCGGACAATGT..................................... 28 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................TTCCTCGGTTTGTCGGTTCGAG................ 22 0 2 1.00 2 0 2 0 0 0
................................................................................................................................................................................................................................GTCGGTTCGAGCGCAGACTTCTCG... 24 0 1 1.00 1 0 1 0 0 0
...............CATCTAATTTGAAGAATAATT....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................TCGGACAATGTTCCTCGGTTTG.......................... 22 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................AAGAAAAAGAAAATCTTTCGGACAA........................................ 25 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................AATGTTCCTCGGTTTGTCGGTTCGA................. 25 0 2 1.00 2 0 2 0 0 0
...........................................................................................................................................................................................................................GGTTTGTCTGTTCGAGCGCAGACTTCT..... 27 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................TCGGACAATGTTCCTCGGTTTGTGGGT..................... 27 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................AGTTATTAAGTGTTTAGAAAAGAT................................................................................ 24 0 2 1.00 2 0 2 0 0 0
...................................................................................................TGTGAGTGCACTAAGTTTATAAAACGT............................................................................................................................. 27 1 2 1.00 2 1 1 0 0 0
.......................................................................................................................................................................................AAATAGAAAAAGAAAATCTTTCGGACAAT....................................... 29 2 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................................TCCTCGGTTTGTCGGTTCGAGCGCA............ 25 0 2 1.00 2 0 2 0 0 0
.............................................................................................................CTAAGTTTATAAGACGTTAGCCAG...................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0
.......................................................................................................................................................................................................................CCTCGGTTTGTCGGTTCTAGCGCAG........... 25 1 2 0.50 1 1 0 0 0 0
.......................................................................................................AGTGCACTAAGTTTATAAGACGT............................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
................................................................................................................................GCCAGTTGCAGCTTTTTTAAGTTA................................................................................................... 24 0 2 0.50 1 0 1 0 0 0
....................................................................................................................AAAAAGACGTTAGCCAGTTGCAGCTTTT........................................................................................................... 28 2 2 0.50 1 0 1 0 0 0
................................................................................................................................GCCAGTTGTAGCTTTTTTAAGTTATT................................................................................................. 26 1 2 0.50 1 1 0 0 0 0
...................................................................................................TGTAAGTGCACTAAGTTTATAAGACGT............................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
....................................................................................................................TATAAGACGTTAGCCAGTTGCAGCTTTTT.......................................................................................................... 29 0 2 0.50 1 0 0 1 0 0
.............................................................................................................................................................................................................................TTTGTCGGTTCGAGCGCAG........... 19 0 2 0.50 1 0 1 0 0 0
.............................................................................................................................................................................................................GGACAATGTTCCTCGGTTTGTCGTT..................... 25 1 2 0.50 1 0 1 0 0 0
.................................................................................................................GTTTATAAGACGTTAGCCAGTTGCAGC............................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
..............................................................................................................................................................................................................GACAATATTCCTCCGTTTGTCGGTT.................... 25 2 2 0.50 1 0 1 0 0 0
.................................................................................................................................................................................AGAATATAAAAGAAAAAGAAAATCT................................................. 25 0 2 0.50 1 0 1 0 0 0
......................................................................................................GAGTGCACTAAGCTTATAAGACGT............................................................................................................................. 24 1 2 0.50 1 0 1 0 0 0
..............................................................................................................................TAGCCAGTTGCAGCTTTTTGAT....................................................................................................... 22 2 2 0.50 1 0 1 0 0 0
.....................................................................................................................ATAAGACGTTAGCCAGTTGCAGCTTTTT.......................................................................................................... 28 0 2 0.50 1 0 1 0 0 0
.........................................................................................................TGCACTAAGTTTATAAGACGTTAGCCAG...................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
..........................................................................................................GCACTAAGTTTATTAGACGTTAGCCAGT..................................................................................................................... 28 1 2 0.50 1 0 1 0 0 0
...............................................................................................................................GGCCAGTTGCAGCTTTTTTAAGTTAT.................................................................................................. 26 1 2 0.50 1 0 0 1 0 0
.......................................................................................................................................................................................................................CCTCGGTTTGTCGGTTCGAGCGCA............ 24 0 2 0.50 1 0 1 0 0 0
.........................................................................................................................................................................................................................ATGGTTTGTCGGTTCGAGCGCAGACTT....... 27 2 2 0.50 1 0 1 0 0 0
...............................................................................................................................................................................................................ACAATGTTCCTCGGTTTGTCGG...................... 22 0 2 0.50 1 0 1 0 0 0
.....................................................................................................................................TTGCAGCTTTTTTAAGTTATTACGT............................................................................................. 25 1 2 0.50 1 1 0 0 0 0
....................................................................................................GTGAGTGCACTAAGTTTA..................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0
...................................................................................................................TTATAGGACGTTAGCCAGTTGCAGC............................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
................................................................................................................................................TTAAGTTATTGAGTGTTTAGAAAAGAT................................................................................ 27 1 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................GTTCCTCGGTTTGTCGGTTCGAGCTC............. 26 1 2 0.50 1 0 1 0 0 0
............................................................................................................................................................................................................................GTTTGTCGGTTCGAGCGCAGACTT....... 24 0 2 0.50 1 0 1 0 0 0
..............................................................................................................................TAGCCAGTTGCAGCTTTTTTA........................................................................................................ 21 0 2 0.50 1 0 1 0 0 0
..................................................................................................................TTTATAAGACGTTAGCCAGTTGCAGCTT............................................................................................................. 28 0 2 0.50 1 1 0 0 0 0
...................................................................................................TGTGAGTGCACTAAGTTTATAAGAGGT............................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
.................................................................................................................GTTTATAAGACGTTAGCCAGTTGCAGCT.............................................................................................................. 28 0 2 0.50 1 0 1 0 0 0
...............................................................................................................................AGCCAGTTGCAGCTTTTTTAAATTATT................................................................................................. 27 1 2 0.50 1 0 1 0 0 0
................................................................................................................................................................................................................AAATGTTCCTCGGTTTGTCGGTTCGA................. 26 1 2 0.50 1 0 1 0 0 0
...................................................................................................TGTGTGTGCACTAAGTTTATAAGACGT............................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................................ATTCGGTTTGTCGGTTCGAGCGCAGGCT........ 28 3 2 0.50 1 0 1 0 0 0
...........................................................................................................................................................................................................GCGGACAATGTTCCTCGGTTTGTCGCT..................... 27 2 2 0.50 1 0 0 1 0 0
....................................................................................................................TATAAGACGTTAGCCAGTTGCAGCTT............................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
.............................................................................................ATACTTCGTGATTGCACTAAGTTTAT.................................................................................................................................... 26 2 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................ACAATGTTCCTCGGTTTGTCGGTTCGA................. 27 0 2 0.50 1 0 1 0 0 0
................................................................................................................................................TTAAGTTATTAAGTGTTTAGAAA.................................................................................... 23 0 2 0.50 1 0 1 0 0 0
............................................................................................................ACTAAGTTTATAAGACGTTAGCCAGT..................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
.......................................................................................................................AAGACGTTAGCCAGTTGCAGCTTTT........................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
....................................................................................................GTGAGTGCACGAAGTTTATAAGACGT............................................................................................................................. 26 1 2 0.50 1 0 1 0 0 0
................................................................................................................................................TTAAGTTATTAAGTGTTT......................................................................................... 18 0 2 0.50 1 1 0 0 0 0
..................................................................................................TTGTGAGTGCACTAAGTTTATAAGGCGT............................................................................................................................. 28 1 2 0.50 1 0 1 0 0 0
..............................................................................................................................TAGCCAGTTGCAGCTTTTTTTAAGT.................................................................................................... 25 3 2 0.50 1 0 1 0 0 0
....................................................................................................GTGAGTGCACTAAGTTTATAAGACGTC............................................................................................................................ 27 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................TTAGCCAGTTGCAGCTTTTTTAAGTTA................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
..................................................................................................TTGTGAGCGCACTAAGTTTATAAGACGT............................................................................................................................. 28 1 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................................CGGTTTGTCGGTTCGAGCGCAGA.......... 23 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................................CTCGGTTTGTCGGTTCGAGCACAGAC......... 26 1 2 0.50 1 0 1 0 0 0
.........................................................................................................TGCACTAAGTTTATAAGACGTTAGCCA....................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
..................................................................................................TTGTGAGTGCACTAAGTTTATAAGACGC............................................................................................................................. 28 1 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................................CTCGGTTTGTCGGATCGAGCGCAGC.......... 25 2 2 0.50 1 0 1 0 0 0
.........................................................................................................................................................TAAGTGTTTAGAAAAGATTTAAATAG........................................................................ 26 0 2 0.50 1 0 1 0 0 0
....................................................................................................GTGATTGCACTAAGTTTATAAGACGTC............................................................................................................................ 27 2 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................TACTCGGTTGGTCGGTTCGAGCGC............. 24 2 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................GTTCCTCGGTTTGTCGGTTCGAG................ 23 0 2 0.50 1 0 1 0 0 0
..................................................................................................TTGTGCGTGCACTAAGTTTATAAGACGT............................................................................................................................. 28 1 2 0.50 1 0 0 1 0 0
...................................................................................................TGCGAGTGCCCTAAGTTTATAAGACGT............................................................................................................................. 27 2 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................GTTCCTCGGTTTGTCGGTT.................... 19 0 2 0.50 1 0 1 0 0 0
...................................................................................................TGTGAGTGCACTACGTTTATAAGACGT............................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
.................................................................................................................................................TAAGTCATTAAGTGTTTAGAAAAGAT................................................................................ 26 1 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................ATCTCGGTTTGTCGGTTCGAGCGCAGAC......... 28 2 2 0.50 1 0 1 0 0 0
................................................................................................................................................TTAAGTTATTAAGTGTTTAGAAAAAT................................................................................. 26 2 2 0.50 1 0 1 0 0 0
...............................................................................................................................................................................................................TAAATGTTCCTCGGTTTGTCGGTTCG.................. 26 2 2 0.50 1 1 0 0 0 0
................................................................................................................................................ATAAGTTATTAAGTGTTTAGAAAAGAT................................................................................ 27 1 2 0.50 1 1 0 0 0 0
..............................................................................................................................................TTTTAAGTTATTAAGTGTTTAGAAAAGA................................................................................. 28 0 2 0.50 1 0 1 0 0 0
....................................................................................................................................................................................................................GTTCCTCGGTTTGTCGGTTCGAGCGCA............ 27 0 2 0.50 1 0 1 0 0 0
.......................................................................................................................................GCAGCTTTTTTAAGTTATTAAGTGT........................................................................................... 25 0 2 0.50 1 0 1 0 0 0
............................................................................................................................................TTTTTTAAGTTATTAAGTGTTTAGAAA.................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................TAAGTTATTAAGTGTTTCGAAAAGAT................................................................................ 26 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................TAAGTGTTTAGAAAAGATTTA............................................................................. 21 0 2 0.50 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004514:2735599-2735849 + dwi_999 AATTGAAAACTGACTGTAGATTAAACTTCTTATTAAAATTACTTTTCTTTTATTAATTAATAACAAAAATTAAAAATAATTACAAAATTTTTTTATGAAACACTCACGTGATTCAAATATTCTGCAATCGGTCAACGTCGAAAAAATTCAATAATTCACAAATCTTTTCTAAATTTATCTTATATTTTCTTTTTCTTTTAGAAAGCCTGTTACAAGGAGCCAAACAGCCAAGCTCGCGTCTGAAGAGCGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AATTGAAAACTGACTGTAGATTAAACTTCTTATTAAAATTACTTTTCTTTTATTAATTAATAACAAAAATTAAAAATAATTACAAAATTTTTTTATGAAACACTCACGTGATTCAAATATTCTGCAATCGGTCAACGTCGAAAAAATTCAATAATTCACAAATCTTTTCTAAATTTATCTTATATTTTCTTTTTCTTTTAGAAAGCCTGTTACAAGGAGCCAAACAGCCAAGCTCGCGTCTGAAGAGCGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........ACTGACTGTAGATTAAACTTCTTA...........................................................................................................................................................................................................................24117.0017017000
........ACTGACTGTAGATTAAACTTCTTAT..........................................................................................................................................................................................................................2516.00606000
........ACTGACTGTAGATTAAACTTCTTATT.........................................................................................................................................................................................................................2614.00404000
....................................................................................................................ATATTCTGCAATCGGTCAACGTCGA..............................................................................................................2523.00601050
.............................................................................................................................................................................................................................AAACAGCCAAGCTCGCGTCTGAAGAG....2613.00302010
....................................................................................................................ATATTCTGCAATCGGTCAACGTCG...............................................................................................................2422.50505000
.............................................................................................................................................................................................................................AAACAGCCAAGCTCGCGTCTGAAG......2412.00201010
....................................................................................................................ATATTCTGCAATCGGTCAACGT.................................................................................................................2221.50303000
...............................................................................................................................................................................................................TGTTACAAGGAGCCAAACAGCCAAGC..................2621.50300030
................................................................................TACAAAATTTTTTTATGAAACACTCACG...............................................................................................................................................2811.00101000
....................TTAAACTTCTTATTAAAATTACTTTTC............................................................................................................................................................................................................2711.00101000
...............................................................................................................................................................................................................TGTTACAAGGAGCCAAACAGCCAAGCT.................2721.00200020
....................................................................................................................................................................................................TTTAGAAAGCCTGTTACA.....................................1811.00101000
............................................................................................................................................................................................................................CAAACAGCCAAGCTCGCGTCTGA........2321.00201010
....................................................................................................................................................................................................TTTAGAAAGCCTGTTACAAG...................................2011.00101000
............................................................................................................................................................................................................................CAAACAGCCAAGCTCGCGTCTGAAG......2511.00100010
...............................................................................................................................................................................................................................ACAGCCAAGCTCGCGTCTGAAGA.....2311.00101000
..........................................................................................................................................................................................................AAGCCTGTTACAAGGAGCCAAAC..........................2311.00101000
...TGAAAACTGACTGTAGATTAAACT................................................................................................................................................................................................................................2411.00101000
......................................................................................................................................................................................................................................AGCTCGCGTCTGAAGAGCGCC2111.00101000
.....................................................................................................................TATTCTGCAATCGGTCAACGTCGA..............................................................................................................2421.00201100
.........CTGACTGTAGATTAAACTTCTTA...........................................................................................................................................................................................................................2311.00101000
............................................................................................................................................................................................................................CAAACAGCCAAGCTCGCGTCTGAAGAGCG..2911.00100010
......................................................................................................................................................................................................TAGAAAGCCTGTTACAAGGAGCCAAA...........................2611.00100100
............................................................................................................................................................................................................................CAAACAGCCAAGCTCGCGTCTGAAGAG....2711.00100010
................................................................................................................................................AATTCAATAATTCACAAATCTTT....................................................................................2320.50101000
......................................................................................................................ATTCTGCAATCGGTCAACGTC................................................................................................................2120.50101000
.................................................................................................................................................................................................................TTACAAGGAGCCAAACAGCCAAGCTCG...............2720.50101000
...............................................................................................................................................................................................................TGTTACAAGGAGCCAAACAGCCAAG...................2520.50100010
..........................................................................................................CGTGATTCAAATATTCTGCAATCGG........................................................................................................................2520.50101000
........................................................................................................................................................................................................................GAGCCAAACAGCCAAGCTCGCGT............2320.50101000
....................................................................................................................ATATTCTGCAATCGGTCAACGTC................................................................................................................2320.50101000
............................................................................................................................CAATCGGTCAACGTCGAAAAAAT........................................................................................................2320.50101000
.............................................................................................................................................................................................................................AAACAGCCAAGCTCGCGTCTGAA.......2320.50101000
............................................................................................................................................................................................................GCCTGTTACAAGGAGCCAAACAGC.......................2420.50101000
..................................................................................................................................................................................................................TACAAGGAGCCAAACAGCCAAGC..................2320.50100010
.................................................................................................................................................................................................................TTACAAGGAGCCAAACAGCC......................2020.50100010
.....................................................................................................................TATTCTGCAATCGGTCAACGTCGAAAA...........................................................................................................2720.50101000
..........................................................................................TTTTATGAAACACTCACGTGAT...........................................................................................................................................2220.50101000
..................................................................................................................AAATATTCTGCAATCGGTCAACGTCGA..............................................................................................................2720.50101000
...........................................................................................................................................................................................................................CCAAACAGCCAAGCTCGCGTCTGA........2420.50101000
..................................................................................................................................................................................................................TACAAGGAGCCAAACAGCCAAGCT.................2420.50101000
..................................................................................................................................................................................................................TACAAGGAGCCAAACAGCCAAGCTCGCG.............2820.50101000
.............................................................................................................................................................................................................................AAACAGCCAAGCTCGCGTCTGA........2220.50101000
......................................................................................................................................................ATAATTCACAAATCTTTTCTAAATT............................................................................2520.50101000
.............................................................................................................GATTCAAATATTCTGCAATCGGTCAACG..................................................................................................................2820.50101000
....................................................................................................................ATATTCTGCAATCGGTCAACGTCGAA.............................................................................................................2620.50100010
....................................................................................................................ATATTCTGCAATCGGTCAACGTCGAAA............................................................................................................2720.50101000
.........................................................................................................ACGTGATTCAAATATTCTGCA.............................................................................................................................2120.50100010
................................................................................................................................................AATTCAATAATTCACAAATCTT.....................................................................................2220.50101000
..........................................................................................................................TGCAATCGGTCAACGTCGAAAAAATTCA.....................................................................................................2820.50100010
...............................................................................................................................................AAATTCAATAATTCACAAATCTT.....................................................................................2320.50101000
........................................................................................................................................................................................................................GAGCCAAACAGCCAAGCTCGCG.............2220.50101000

Generated: 05/18/2015 at 12:25 AM