ID:

dwi_991

 Coordinate:

scf2_1100000004514:1657199-1657349 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.0 -1.9 -1.7

Flybase annnotation

exon [dwil_GLEANR_15945:7]; CDS [Dwil\GK15696-cds]; intron [Dwil\GK15696-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAACATGCAACATGCAACAATGAGAACATGGCAAACTCACATATGAATGAGATAGCAACAACAACAACAACTTTAACTTGAATGAAACAAGATGAAGATGAAGACTTAATCAACAATTTTTGGAGCGCCACAACAAAAAAGCATTTCGCTTAAAATAATGTCTTAATAATACTGTTGTAAATCTTTTTTACTTCCCCACAGCTGGTATGCGAGGAGTGCATAGAGAAGAAAGAGTTATAGATATTGAGTGA
******************************************************************************....((...(((((((..(((.........)))..))..)))))...))...........***************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body		 V119
head
..............................................................................TGAATGAAACAAGATGAAGATGAAGACT................................................................................................................................................. 28 0 1 5.00 5 0 0 5 0 0
.....................................................................................................................................................................................TCTTTTTTACTTCCCCACAGCTGGTA............................................ 26 0 1 3.00 3 1 2 0 0 0
.........................................................................TAACTTGAATGAAACAAGATGAAGATG....................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.AACATGCAACATGCAACAATGAGAACA............................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.....................................CACATATGAATGAGTTAGCAACAA.............................................................................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0
..........................................................................AACTTGAATGAAACAAGATGAAGATGA...................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
...............................................TGAGATAGCAACAACAACAACAACTTT................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 1
............................................................................................TGAAGATGAAGACTTAATCAACAATTTT................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................ACAGCTGGTATGCGAGGAGTGC................................ 22 0 1 1.00 1 0 0 0 1 0
......................................................................................................................................................................................CTTTTTTACTTCCCCACAGCTGGT............................................. 24 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................CCCACAGCTGGTATGCGAGGAGTGC................................ 25 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................GAGTGCATAGAGAAGAAAG................... 19 0 1 1.00 1 0 0 0 1 0
...........................................................................................................................................................................................TTACTTCCCCACAGCTGGTATGCGAGG..................................... 27 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................TCTTTTTTACTTCCCCACAGCTGGTAA........................................... 27 1 1 1.00 1 1 0 0 0 0
............TGCAACAATGAGAACATGGCAAACTCACA.................................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
.............................................................................TTGAATGAAACAAGATGAAGATGAAGA................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................TTTACTTCCCCACAGCTGGTATGCGAG...................................... 27 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................TTTACTTCCCCACAGCTGGTATGC......................................... 24 0 1 1.00 1 1 0 0 0 0
....................TGAGAACATGGCAAACTCACATATGAAT........................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.................................................................................ATGAAACAAGATGAAGATGAAGACTT................................................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0
..............................................................................................................CAACAATTTTTGGAGCGCCACAACAAAA................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................CGCTTAAAATAATGTCTTAAT.................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..........................................................CAACAACAACAACTTTAACTTGAATGA...................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................TGCATAGAGAAGAAAGAGTTATAGA.......... 25 0 1 1.00 1 1 0 0 0 0
..........................................................................................................TAATCAACAATTTTTGGAGCGCCACAA...................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
TAACATGCAACATGCAACAATGAGAAC................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................TGGAGCGCCACAACAAAAAAGCATT.......................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................ATGCGAGGAGTGCATAGAGAAGAAAGA.................. 27 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................AGGAGTGGATAGAGAAGAATGG.................. 22 3 6 0.17 1 1 0 0 0 0
........................................................................................................................................................................................................GCTGGTATGGGAGGTATGC................................ 19 3 20 0.10 2 1 0 0 1 0
.........................................TATGAATGAGAGAGAAACATC............................................................................................................................................................................................. 21 3 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

ATTGTACGTTGTACGTTGTTACTCTTGTACCGTTTGAGTGTATACTTACTCTATCGTTGTTGTTGTTGTTGAAATTGAACTTACTTTGTTCTACTTCTACTTCTGAATTAGTTGTTAAAAACCTCGCGGTGTTGTTTTTTCGTAAAGCGAATTTTATTACAGAATTATTATGACAACATTTAGAAAAAATGAAGGGGTGTCGACCATACGCTCCTCACGTATCTCTTCTTTCTCAATATCTATAACTCACT
*****************************************************************************************************************....((...(((((((..(((.........)))..))..)))))...))...........****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body
.....................................................................................................................................................................................AGAAAAAGTGCAGGGGTCTC.................................................. 20 3 7 0.14 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004514:1657149-1657399 - dwi_991 TA----------ACATGCAAC-----ATGCAAC----------AATGAGA---ACATGGCAAACTCACAT-----------------------A-------------------------------------TGAATGAGATAGCAACAACAACAACAACTTTAACTTGAATGAAACAAGAT-G------AAGATGAAGAC---TTAATCAACAATTTTTGG----AGCGCCACAACAAAAAAGCA-TTTCGCTTAAAATAATGTCTTA---------------ATAATAC--TGTT-----GTAAAT----CTTT-TTTACTTCCCCACAGCTGGT---A-TGCGAGGAGTGCA----TAGAGA-AGAAAGA----GTTATAGATAT--TGA-GTG-------A
droVir3 scaffold_12875:4109010-4109233 + dvi_5158 TA----------GCCCT---C------AACGC-----------AAGT-------------------ACGTTGAGC-ATATGCATACATACCATAGAAATCGGACAACAACAAC------------------------------------------------------------TACATGAA-A------ACATCAA-C-----AACAAC---AACTTTT-GA---GGCGGCCC-G-AAGAAAGCA-TTTCGCT-AACAT-TTGTCTTAGTGTTTTC--TCCCAATAATAT--TGTT-----GTACAT----CTTT-TTTACTTC-CCACAGCTGGAGTAT-GG--AGAAGTGCC----TAGAGC---AGAGA----------GAGAG--CGA-GAG-------A
droMoj3 scaffold_6496:20940037-20940247 - CG----------------CC-----------------------AAGT-------------------GCGTTGGGC-ATATACATA----CCATAGAAAACGGACAACAA----------------------------------------CAACAAC-----------------AAC---------------------------AAGAAC---AACATTTAG----AGCGGCTT-G-AAGAAAACA-ATTCGCT-AATATTTTGTCTTAAGGTTTTC-TTCCCAATAATAT-TTGTT-----GTACAT----CTTT-TTTACTTC-CTACAGCTGGT--AT-TA--AGGAGTGAC----TAGAGTACGGATGA----AGTAAAGAGTG--TGTAAGA-------A
droGri2 scaffold_5621:28-246 + CC----------A-------------------------------------------------------------------------------TAGATAACCGACAACAACAGCAACAAACAACATACAACATGACTACGAAAACAACA-----------------------------------------ACAACAAAAAC---AAGAA--------GAA-G----AACGGCCA-G-AAGAAAGCA-TTTCGCT-AACAT-TTGTCTTAATGTTTTCCTACCCAATAATAT--TGTT-----GTACAT----CTTT-TTTACTTC-CCACAGCTGGT--AATGG--CGGAGCGCGCCTGTCGGAG---AATGA----GAGAGAGAGAA--TAA-ATA-------A
dp5 3:12680395-12680593 - TC----------C-GATACCC-----AATTGTA----------AAATGAACACAAT--GCATATAGAAATCAACAGATTAC--TT-----------------GCGACAT----------------------------------------CATCATCC----------------------------------------GAT---TTCAGC---CACTTTT-T----AGCGACAGA----GAACG-A-TTTCGCT-AGCA---TGTCCAA---------------ATAATAATATGTT-----GTACATCTATCTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAGG----------------TGGAGAA--GGA-GTC-------A
droPer2 scaffold_2:8903045-8903243 + TC----------C-GATACCC-----AATTGTA----------AAATGAACACAAT--GCATATAGAAATCAACAGATTAC--TT-----------------GCGACAT----------------------------------------CATCATCC----------------------------------------GAT---TTCAGC---CACTTTT-T----AGCGACAGA----GAACG-A-TTTCGCT-AGCA---TGTCCAA---------------ATAATAATATGTT-----GTACATCTATCTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAGG----------------TGGAGAA--GGA-GTC-------A
droAna3 scaffold_13266:9727337-9727519 + T-------------------------------------------------------CCGCATATGGACATTAAGA-ATCTTCATC-----------------AA---------------------------------------------------------------------AAAAAGGA--------ACAAAAAAACC---TTAAGC---CACCGTT-C----AGCGGCAGA----GAAAGCATTTTCTCT-ACAAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AT-GA----AG-GTGGAGTAATAGA-TCA-------G
droBip1 scf7180000396427:870266-870476 + TT----------A-ATCATTCTTTACAATTGTCTAACGAAAAAAAA----TACA----------AAACATTAAGA-ATCTTCATT-----------------CA---------------------------------------------------------------------AACAAAAA-AAAAAGGAGAAACAACAC---ATGAGC---CACCGTT-CAGCCAGCGGCAGA----GAAAGCA-TTTCTCTCAAAAT-TTATCTTA---------------ATAATATTTTGTT-----GTACAT----CTTT-TTTACTTCCCCAGAGCTGGT---T-TG--AGGAGTTCA----TAGAAG---T---------------------TGA-AGA-------T
droKik1 scf7180000302679:93385-93598 - TTACATAAACTAACATTGCCG-----AATCGTC----------AAATTAA---ATTTTGCATACGGACATCAAGA-ATCGCGACT-----------------AA---------------------------------------------------------------------GACA------------ACATCAT-A----------T---AACCTTT-C----AGCCGCAGAG-ACGACAACA-CTTGTCT-AAAAT-TTGTCTTA---------------ATAATCT--TGTT-----GTACAT----CTTTTTTTACCTTCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAGAAGAGAGA----TGTGTGGAATG--TGG-ATG-------A
droFic1 scf7180000454039:850882-851085 - GT----------ACTTTGCCC----------------------AAGTTAA---AATTGGCACTCGGACATCAACA-ATCGCCGCT-----------------TT---------------------------------------------------------------------GAGAAGAA-A------ACATCAT-GAC---ATGAGC---GGCCTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCCTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAGGATGA-GGA-------T
droEle1 scf7180000491201:2018024-2018203 - ----------------------------------------------------------------GGACATCAACA-ATCGGCGCT-----------------AA---------------------------------------------------------------------GACAAGAACA------ACACCAT-GAC---TTGAGC---GGCCTTT-T----AGTGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAG--TG--GAAAGTGGAAA
droRho1 scf7180000780066:69070-69278 + -------------CATCGCCT-----AATCGCCTAA-------AAATTAA---AATTGGCATTCGGACATTAACA-AACGGCGCT-----------------AA---------------------------------------------------------------------GACAAGAAAA------ACACCAT-AAC---TTAAGC---GACCTTT-T----AGCGGCAGA----GAAAGCA-CTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----TGTGTGGAGAG--TG--GAA-------A
droBia1 scf7180000302143:3063699-3063898 - AA------ACTAACATTGGCT-----AATCGTC----------AAGCTTG---AATTGGCATTCGGAGATCAACA-ATCGCCGCT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAAAGAC---TTGCTC---GACCCTAGT----AGCGGCAGA----GAAATCA-TTTCTCC-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGA---T-TG--AGGAGTGCG----TAGAAG---AAAGA----TGT-------------------------
droTak1 scf7180000415384:80345-80556 + TA----------ACATCGCCC-----AATCGTC----------AAATTGA---AATTGGCATTCGAAGATCAACA-ATCGCCGCT-----------------TT---------------------------------------------------------------------GATAAGAA-A------ACATCAAAGAC---TTGGGC---GACCTAT-T----AGCGGAAGA----GAAAGCA-TTTCTCT-AAAAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAGGATGA-GGA-------A
droEug1 scf7180000409474:2393929-2394130 + TA----------ACATCGCCC-----AATCGTC----------AAACTAA---AATTGGCATTCGGGGATCGGAGAAACGCCTTT-----------------AA---------------------------------------------------------------------GACAAGAAAG------TCATCTT-GAGAGCTT---------------G----AGCGGCAGA----GAAAGCA-TTTCTCT-AACTT-TTGTCTTA---------------ATAATAT--TGTTGTATTGTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGAGATGAGTGTGGA--------------------
dm3 chr2R:15551723-15551934 - TA----------ACATCGCCC-----TATCGTC----------AAATCGA---AATTGGCATTCGGAGATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TTGAGG--CGA-TTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAG---GA-GGATGTG---G
droSim2 2r:16198985-16199193 - TA----------ACATCGCCC-----TATCGTC----------AAATTGA---AATTGGCATTCGGAGATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TTGAGG--CGTTTTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAG---GA-GGA-------T
droSec2 scaffold_1:13066456-13066664 - TA----------ACATCGCCC-----TATCGCC----------AAATTGA---AATTGGCATTCGGAGATCAACA-AACGTCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TTGAGG--CGATTTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAG---GA-GGA-------T
droYak3 2R:13620891-13621094 + TA----------ACATCGCCC-----AATCG------------------A---AATTGGCATTCGAAGATCAACT-ATCGCCGCT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAT---TTGAGG--CGATTTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAGGAGGA-GGA-------T
droEre2 scaffold_4845:9751960-9752166 - TA----------ACA-CGCCC------ATCGTC----------AAATCGA---AATTGGCATTCGGAGATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TAGAGG--CGATTTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAG---GA-GGA-------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TA----------ACATGCAAC-----ATGCAAC----------AATGAGA---ACATGGCAAACTCACAT-----------------------A-------------------------------------TGAATGAGATAGCAACAACAACAACAACTTTAACTTGAATGAAACAAGAT-G------AAGATGAAGAC---TTAATCAACAATTTTTGG----AGCGCCACAACAAAAAAGCA-TTTCGCTTAAAATAATGTCTTA---------------ATAATAC--TGTT-----GTAAAT----CTTT-TTTACTTCCCCACAGCTGGT---A-TGCGAGGAGTGCA----TAGAGA-AGAAAGA----GTTATAGATAT--TGA-GTG-------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................TGAATGAAACAAGAT-G------AAGATGAAGAC---T........................................................................................................................................................................................................2815.00550000
..................................................................................................................................................................................................................................................................................................................T----CTTT-TTTACTTCCCCACAGCTGGT---A-...............................................................2613.00301020
.................................................................................................................................................................TAACTTGAATGAAACAAGAT-G------AAGATG.................................................................................................................................................................................................................2711.00100010
.A----------ACATGCAAC-----ATGCAAC----------AATGAGA---ACA............................................................................................................................................................................................................................................................................................................................................................2711.00100010
..................................................................................................................................................................AACTTGAATGAAACAAGAT-G------AAGATGA................................................................................................................................................................................................................2711.00100010
.......................................................................................................................................TGAGATAGCAACAACAACAACAACTTT..................................................................................................................................................................................................................................................2711.00100001
....................................................................................................................................................................................T-G------AAGATGAAGAC---TTAATCAACAATTTT..........................................................................................................................................................................................2811.00101000
.......................................................................................................................................................................................................................................................................................................................................ACAGCTGGT---A-TGCGAGGAGTGC...................................................2211.00100100
.......................................................................................................................................................................................................................................................................................................................CTTT-TTTACTTCCCCACAGCTGGT---.................................................................2411.00100010
....................................................................................................................................................................................................................................................................................................................................CCCACAGCTGGT---A-TGCGAGGAGTGC...................................................2511.00100010
...........................................................................................................................................................................................................................................................................................................................................................GAGTGCA----TAGAGA-AGAAAG.................................1911.00100100
.............................................................................................................................................................................................................................................................................................................................TTACTTCCCCACAGCTGGT---A-TGCGAGG........................................................2711.00101000
..................................................................................................................................................................................................................................................................................................................T----CTTT-TTTACTTCCCCACAGCTGGT---A-A..............................................................2711.00101000
...........................TGCAAC----------AATGAGA---ACATGGCAAACTCACA...............................................................................................................................................................................................................................................................................................................................................2911.00101000
.....................................................................................................................................................................TTGAATGAAACAAGAT-G------AAGATGAAGA.............................................................................................................................................................................................................2711.00100010
............................................................................................................................................................................................................................................................................................................................TTTACTTCCCCACAGCTGGT---A-TGCGAG.........................................................2711.00101000
............................................................................................................................................................................................................................................................................................................................TTTACTTCCCCACAGCTGGT---A-TGC............................................................2411.00101000
.............................................TGAGA---ACATGGCAAACTCACAT-----------------------A-------------------------------------TGAAT............................................................................................................................................................................................................................................................................2811.00101000
.........................................................................................................................................................................ATGAAACAAGAT-G------AAGATGAAGAC---TT.......................................................................................................................................................................................................2611.00100100
................................................................................................................................................................................................................CAACAATTTTTGG----AGCGCCACAACAAAA....................................................................................................................................................................2811.00101000
.........................................................................................................................................................................................................................................................CGCTTAAAATAATGTCTTA---------------AT.......................................................................................................................2111.00101000
..................................................................................................................................................CAACAACAACAACTTTAACTTGAATGA.......................................................................................................................................................................................................................................2711.00101000
..............................................................................................................................................................................................................................................................................................................................................................TGCA----TAGAGA-AGAAAGA----GTTATAGA....................2511.00101000
............................................................................................................................................................................................................TAATCAACAATTTTTGG----AGCGCCACAA.........................................................................................................................................................................2711.00101000
TA----------ACATGCAAC-----ATGCAAC----------AATGAGA---AC.............................................................................................................................................................................................................................................................................................................................................................2711.00101000
..........................................................................................................................................................................................................................TGG----AGCGCCACAACAAAAAAGCA-TT............................................................................................................................................................2511.00101000
...................................................................................................................................................................................................................................................................................................................................................A-TGCGAGGAGTGCA----TAGAGA-AGAAAGA----............................2711.00100010
droVir3
TA----------GCCCT---C------AACGC-----------AAGT-------------------ACGTTGAGC-ATATGCATACATACCATAGAAATCGGACAACAACAAC------------------------------------------------------------TACATGAA-A------ACATCAA-C-----AACAAC---AACTTTT-GA---GGCGGCCC-G-AAGAAAGCA-TTTCGCT-AACAT-TTGTCTTAGTGTTTTC--TCCCAATAATAT--TGTT-----GTACAT----CTTT-TTTACTTC-CCACAGCTGGAGTAT-GG--AGAAGTGCC----TAGAGC---AGAGA----------GAGAG--CGA-GAG-------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................TACTTC-CCACAGCTGGAGTAT-GG--AGA........................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GG--AGAAGTGCC----TAGAGC---AGAGA----------GAGA..................2611.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TGTCTTAGTGTTTTC--TCCCAAT.......................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TGCC----TAGAGC---AGAGA----------GAGAG--CGA-GAG-------.2611.001000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CAGCTGGAGTAT-GG--AGAAGTGCC----TAGA..........................................2711.001000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CC-G-AAGAAAGCA-TTTCGCT-AACAT-T...............................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................GAAGTGCC----TAGAGC---AGAGA----------GAGA..................2311.001000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTC-CCACAGCTGGAGTAT-GG--A..........................................................2111.001000000000000000000000000000000001000000000000000000000000000000
............................................................................ATATGCATACATACCATAGAAATCGGA.............................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................GCC----TAGAGC---AGAGA----------GAGAG--C..............2011.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................GTT-----GTACAT----CTTT-TTTACTTC-CCACAGCT.......................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GTAT-GG--AGAAGTGCC----TAGAGC---AGA..................................2411.001000000000001000000000000000000000000000000000000000000000000000
droMoj3
CG----------------CC-----------------------AAGT-------------------GCGTTGGGC-ATATACATA----CCATAGAAAACGGACAACAA----------------------------------------CAACAAC-----------------AAC---------------------------AAGAAC---AACATTTAG----AGCGGCTT-G-AAGAAAACA-ATTCGCT-AATATTTTGTCTTAAGGTTTTC-TTCCCAATAATAT-TTGTT-----GTACAT----CTTT-TTTACTTC-CTACAGCTGGT--AT-TA--AGGAGTGAC----TAGAGTACGGATGA----AGTAAAGAGTG--TGTAAGA-------ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................AAC---------------------------AAGAAC---AACATTTAG----AGC................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................GTGAC----TAGAGTACGGATG.................................1811.001000001
................................................................................................................................................................................................................................................................................TTTC-TTCCCAATAATAT-TTGTT-----.......................................................................................................2211.001100000
.................................................................................................................................................................................................................................................AACA-ATTCGCT-AATATTTTGTCTTAA.......................................................................................................................................2611.001100000
.............................................................................................................................................................................................................................................................................................................................................GGT--AT-TA--AGGAGTGAC----TAGA..........................................2011.001100000
......................................................................................................................................................................................................................................................ATTCGCT-AATATTTTGTCTTAAGGT....................................................................................................................................2511.001100000
......................................................................................................................................................................................................................CATTTAG----AGCGGCTT-G-AAGA....................................................................................................................................................................2011.001100000
.........................................................................................................................................................AAC-----------------AAC---------------------------AAGAAC---AACATTT.........................................................................................................................................................................................1911.001100000
.............................................................................................................................................................................................................................................................................................................GTACAT----CTTT-TTTACTTC-CTACAGCTGGT--..................................................................2911.001100000
..................................................................................................................................................................................................................................................ACA-ATTCGCT-AATATTTTGT............................................................................................................................................2011.001000001
droGri2
CC----------A-------------------------------------------------------------------------------TAGATAACCGACAACAACAGCAACAAACAACATACAACATGACTACGAAAACAACA-----------------------------------------ACAACAAAAAC---AAGAA--------GAA-G----AACGGCCA-G-AAGAAAGCA-TTTCGCT-AACAT-TTGTCTTAATGTTTTCCTACCCAATAATAT--TGTT-----GTACAT----CTTT-TTTACTTC-CCACAGCTGGT--AATGG--CGGAGCGCGCCTGTCGGAG---AATGA----GAGAGAGAGAA--TAA-ATA-------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................TTACTTC-CCACAGCTGGT--AATGG--CGGA.......................................................2720.50101
dp5
TC----------C-GATACCC-----AATTGTA----------AAATGAACACAAT--GCATATAGAAATCAACAGATTAC--TT-----------------GCGACAT----------------------------------------CATCATCC----------------------------------------GAT---TTCAGC---CACTTTT-T----AGCGACAGA----GAACG-A-TTTCGCT-AGCA---TGTCCAA---------------ATAATAATATGTT-----GTACATCTATCTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAGG----------------TGGAGAA--GGA-GTC-------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................T-TG--AGGAGTGCG----TAGAGG----------------TGGA....................2211.0010000000001
.................................................................GAAATCAACAGATTAC--TT-----------------GCGAC.........................................................................................................................................................................................................................................................................................................2311.0010100000000
....................................................................................T-----------------GCGACAT----------------------------------------CATCATCC----------------------------------------GAT---T........................................................................................................................................................................................................2011.0010000100000
....................................................................................................................................................................................................................CACTTTT-T----AGCGACAGA----GAACG-A-TT............................................................................................................................................................2511.0010000000100
droPer2
TC----------C-GATACCC-----AATTGTA----------AAATGAACACAAT--GCATATAGAAATCAACAGATTAC--TT-----------------GCGACAT----------------------------------------CATCATCC----------------------------------------GAT---TTCAGC---CACTTTT-T----AGCGACAGA----GAACG-A-TTTCGCT-AGCA---TGTCCAA---------------ATAATAATATGTT-----GTACATCTATCTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAGG----------------TGGAGAA--GGA-GTC-------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................GACAGA----GAACG-A-TTTCGCT-......................................................................................................................................................1911.001010000
..............................................................................................................................................................................................................................................GAACG-A-TTTCGCT-AGCA---TGTC...........................................................................................................................................2111.001001000
........................................................................................................................................................................................................................................................................................................................................CAGCTGGT---T-TG--AGGAGTGCG----TAGA..........................................2411.001000001
.......................................................................................................................................................................................................................................................TTCGCT-AGCA---TGTCCAA---------------AT.......................................................................................................................1911.001010000
..............................................................................................................................................................................................................................................................................................................................................GT---T-TG--AGGAGTGCG----TAGAGG----------------TGG.....................2311.001010000
.............................................................................................................................................................................................................................................................................................................................................................GTGCG----TAGAGG----------------TGGAGAA--GGA-...........2111.001000001
droAna3
T-------------------------------------------------------CCGCATATGGACATTAAGA-ATCTTCATC-----------------AA---------------------------------------------------------------------AAAAAGGA--------ACAAAAAAACC---TTAAGC---CACCGTT-C----AGCGGCAGA----GAAAGCATTTTCTCT-ACAAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AT-GA----AG-GTGGAGTAATAGA-TCA-------GSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................G---AT-GA----AG-GTGGAGTAATAGA-TCA-------.2312.002000002
.......................................................................................................................................................................................................C---TTAAGC---CACCGTT-C----AGCGGCAGA----GA....................................................................................................................................................................2611.001000001
......................................................................................................AA---------------------------------------------------------------------AAAAAGGA--------ACAAAAAAACC---.........................................................................................................................................................................................................2111.001010000
........................................................................................................................................................................................................................................................................................................................TTT-TTTACTTCCCCACAGCTGGT---T-...............................................................2411.001100000
.............................................................................................................................................................................................ACAAAAAAACC---TTAAGC---CACCGTT-C----AGC................................................................................................................................................................................2811.001010000
....................................................................................C-----------------AA---------------------------------------------------------------------AAAAAGGA--------ACAAAAA................................................................................................................................................................................................................1850.201001000
droBip1
TT----------A-ATCATTCTTTACAATTGTCTAACGAAAAAAAA----TACA----------AAACATTAAGA-ATCTTCATT-----------------CA---------------------------------------------------------------------AACAAAAA-AAAAAGGAGAAACAACAC---ATGAGC---CACCGTT-CAGCCAGCGGCAGA----GAAAGCA-TTTCTCTCAAAAT-TTATCTTA---------------ATAATATTTTGTT-----GTACAT----CTTT-TTTACTTCCCCAGAGCTGGT---T-TG--AGGAGTTCA----TAGAAG---T---------------------TGA-AGA-------TSizeHit CountTotal NormTotal
No Reads
droKik1
TTACATAAACTAACATTGCCG-----AATCGTC----------AAATTAA---ATTTTGCATACGGACATCAAGA-ATCGCGACT-----------------AA---------------------------------------------------------------------GACA------------ACATCAT-A----------T---AACCTTT-C----AGCCGCAGAG-ACGACAACA-CTTGTCT-AAAAT-TTGTCTTA---------------ATAATCT--TGTT-----GTACAT----CTTTTTTTACCTTCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAGAAGAGAGA----TGTGTGGAATG--TGG-ATG-------ASizeHit CountTotal NormTotal
No Reads
droFic1
GT----------ACTTTGCCC----------------------AAGTTAA---AATTGGCACTCGGACATCAACA-ATCGCCGCT-----------------TT---------------------------------------------------------------------GAGAAGAA-A------ACATCAT-GAC---ATGAGC---GGCCTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCCTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAGGATGA-GGA-------TSizeHit CountTotal NormTotal
No Reads
droEle1
----------------------------------------------------------------GGACATCAACA-ATCGGCGCT-----------------AA---------------------------------------------------------------------GACAAGAACA------ACACCAT-GAC---TTGAGC---GGCCTTT-T----AGTGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAG--TG--GAAAGTGGAAASizeHit CountTotal NormTotal
No Reads
droRho1
-------------CATCGCCT-----AATCGCCTAA-------AAATTAA---AATTGGCATTCGGACATTAACA-AACGGCGCT-----------------AA---------------------------------------------------------------------GACAAGAAAA------ACACCAT-AAC---TTAAGC---GACCTTT-T----AGCGGCAGA----GAAAGCA-CTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----TGTGTGGAGAG--TG--GAA-------ASizeHit CountTotal NormTotal
No Reads
droBia1
AA------ACTAACATTGGCT-----AATCGTC----------AAGCTTG---AATTGGCATTCGGAGATCAACA-ATCGCCGCT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAAAGAC---TTGCTC---GACCCTAGT----AGCGGCAGA----GAAATCA-TTTCTCC-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGA---T-TG--AGGAGTGCG----TAGAAG---AAAGA----TGT-------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TA----------ACATCGCCC-----AATCGTC----------AAATTGA---AATTGGCATTCGAAGATCAACA-ATCGCCGCT-----------------TT---------------------------------------------------------------------GATAAGAA-A------ACATCAAAGAC---TTGGGC---GACCTAT-T----AGCGGAAGA----GAAAGCA-TTTCTCT-AAAAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAGGATGA-GGA-------ASizeHit CountTotal NormTotal
No Reads
droEug1
TA----------ACATCGCCC-----AATCGTC----------AAACTAA---AATTGGCATTCGGGGATCGGAGAAACGCCTTT-----------------AA---------------------------------------------------------------------GACAAGAAAG------TCATCTT-GAGAGCTT---------------G----AGCGGCAGA----GAAAGCA-TTTCTCT-AACTT-TTGTCTTA---------------ATAATAT--TGTTGTATTGTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGAGATGAGTGTGGA--------------------SizeHit CountTotal NormTotal
No Reads
dm3
TA----------ACATCGCCC-----TATCGTC----------AAATCGA---AATTGGCATTCGGAGATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TTGAGG--CGA-TTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAG---GA-GGATGTG---GSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................TTTT-T----AGCGGCAGA----GAAAGCA-TTTCTC........................................................................................................................................................27138.00380000000000000000000000000000000000001010000000000000000000000000000000000000012120000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000210040000000000000000000100210010000000000000000000000000000000000000000000000000000000000001000000000030000000000000000000000200801000
.......................................................................................................................................................................................................................TTTT-T----AGCGGCAGA----GAAAGCA-TT............................................................................................................................................................23125.00250000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000120000000000000000000200101100000000000000000000000000000000000000000000000000000000000000000000000020000000000010000300000031300000
.........................................................................................................................................................................................................................TT-T----AGCGGCAGA----GAAAGCA-TTTCTC........................................................................................................................................................25123.00230000000000000000000000000000000000001000100000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000001010000000000000300000003000000000001000000000000000100000000000000000000000000000000000002000000000200000000000000000300000
.......................................................................................................................................................................................................................TTTT-T----AGCGGCAGA----GAAAGCA-TTTC..........................................................................................................................................................25116.00160000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003000000000000000000000000000000000000100000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000030000001000000000000000000201000
...............................................................................................................................................................................................................................................................................................................................................T---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGT.........................27114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110001110000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000001600000
...............................................................................................................................................................................................................................................................................................................................................T---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AG..........................26113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000120000000000000000000000000230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
..............................................................................................................................................................................................................................................................................................................................................................TGCG----TAGAAG---AGAGA----AGTGTGGAGA..................25111.00110000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000120400000
.....................................................................................................................................................................................................................................................................................................................................................TG--AGGAGTGCG----TAGAAG---AGAGA----AGT.........................25111.00110000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000002000000000000001200000
....................................................................................................................................................................................................................GA-TTTT-T----AGCGGCAGA----GAAAGCA-TT............................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000200000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000200000
..................................................................................................................................................................................................................................................................................................................................TCCCCACAGCTGGT---T-TG--AGGAGTGC...................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000002100000000000000000100000
..........................TATCGTC----------AAATCGA---AATTGGCATTCGGA.................................................................................................................................................................................................................................................................................................................................................2818.0080000000000000000000000000000000000000000000000000000000000000000000000000000022010000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TTT-T----AGCGGCAGA----GAAAGCA-TTTCTC........................................................................................................................................................2618.0080000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001100000
.................................................................................................................................................................................................................................................................................................................................TTCCCCACAGCTGGT---T-TG--AGGAGTGC...................................................2618.0080000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000400000
................................................................................................................................................................................................TCAT-GAC---TTGAGG--CGA-TTTT-T----AGCGGC.............................................................................................................................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGT.......................2715.0050000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................TCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-G..............................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................T-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TTGAGG--C................................................................................................................................................................................................2915.0050000000000000000000000000000000000000000000000000000000000000000000000000000003010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TG--AGGAGTGCG----TAGAAG---AGAGA----AGTG........................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..............................................................................................................................................................................................................................................................................................................................................................TGCG----TAGAAG---AGAGA----AGTGTGGAGAG---..............2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000001010000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTCCCCACAGCTGGT---T-TG--AGGAGTGCG----..............................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
..............................................................................................................................................................................................................................................................................................................................TACTTCCCCACAGCTGGT---T-TG--AGGAG......................................................2615.0050000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................TCCCCACAGCTGGT---T-TG--AGGAGTG....................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AT-TTGTCTTA---------------ATAATAT--TGTT-----GT.....................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................GAA-A------ACATCAT-GAC---TTGAGG--CG...............................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
...................................................................GATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------AC.....................................................................................................................................................................................................................3014.0040000000000000000000000000000000000000000000000000000000000000000000000000000012100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TC----------AAATCGA---AATTGGCATTCGGAGA...............................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000
.....................................................................TCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------AC.....................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGT.........................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................TT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TTGAGG--C................................................................................................................................................................................................3014.0040000000000000000000000000000000000000000000000000000000000000000000000000000002110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGA..................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................T-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----C............................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AGAA-A------ACATCAT-GAC---TTGAGG--C................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................T-TG--AGGAGTGCG----TAGAAG---AGAGA----AG..........................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.......................................................................................................................................................................................................................................................................................................T-----GTACAT----CTTT-TTTACTTCCCCACAGC........................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TC----------AAATCGA---AATTGGCATTCGGAGATC.............................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------A......................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TCGA---AATTGGCATTCGGAGATCAACA-ATC.....................................................................................................................................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-A.....................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010
............................................................................................................................................................................................................................................................................................................................................TGGT---T-TG--AGGAGTGCG----TAGAAG---AGA..................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000
...................................................................GATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-..............................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CCCACAGCTGGT---T-TG--AGGAGTGCG----TA............................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................GATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------A......................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................................................................................................................................................................A------ACATCAT-GAC---TTGAGG--CGA-TTTT-........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................GAGG--CGA-TTTT-T----AGCGGCAGA----GAAAGC................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CGA-TTTT-T----AGCGGCAGA----GAAAGCA-TT............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droSim2
TA----------ACATCGCCC-----TATCGTC----------AAATTGA---AATTGGCATTCGGAGATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TTGAGG--CGTTTTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAG---GA-GGA-------TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................TGCG----TAGAAG---AGAGA----AGTGTGGAGA..................2512.00200000000000011000
...................................................................................TT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TTGAGG--.................................................................................................................................................................................................2912.00200000011000000000
...................................................................GATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------A......................................................................................................................................................................................................................2912.00200000020000000000
...............................TC----------AAATTGA---AATTGGCATTCGGAGA...............................................................................................................................................................................................................................................................................................................................................2512.00200000011000000000
................................................................................................................................................................................AAGAA-A------ACATCAT-GAC---TTGAGG--CGTT.............................................................................................................................................................................................2612.00200000001001000000
..............................................................................CGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATC..................................................................................................................................................................................................................2312.00200000001010000000
....................................................................................................................................................................................................................................................................................................................................CCCACAGCTGGT---T-TG--AGGAGTGCG----TAGA..........................................2812.00200000011000000000
.............................................................................TCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---T........................................................................................................................................................................................................3012.00200000011000000000
........................................................................................................................................................................................................................................................................................................................................................................GAAG---AGAGA----AGTGTGGAGAG---GA-GGA-------T2611.00100000000000010000
...............................TC----------AAATTGA---AATTGGCATTCGGA.................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
......................................................................CAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGA................................................................................................................................................................................................................................2311.00101000000000000000
..............................................TTGA---AATTGGCATTCGGAGATCAACA-........................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.................GCCC-----TATCGTC----------AAATTGA---AATTGGCT.......................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................TAGAAG---AGAGA----AGTGTGGAGAG---GA-GGA-------.2711.00100000000000010000
............................................................................................................................................................................................................................................................................................................................................TGGT---T-TG--AGGAGTGCG----TAGAAG---AGAA.................................2611.00100000010000000000
.............................................................................................................................................................................................................................................................................................AATAT--TGTT-----GTACAT----CTTT-TTTACT..................................................................................2511.00100000010000000000
...............................................................................................................................................................................................................................................................................................TAT--TGTT-----GTACAT----CTTT-TTTACT..................................................................................2311.00100000001000000000
..........................TATCGTC----------AAATTGA---AATTGGCATTCGG..................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
..............................................TTGA---AATTGGCATTCGGAGATCAACA-ATCGC...................................................................................................................................................................................................................................................................................................................................3111.00100000010000000000
............................TCGTC----------AAATTGA---AATTGGCATTCGGAGT...............................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
........................................................................................................................................................................................................................................................................................................................TTT-TTTACTTCCCCACAGCTGGT---T-TG--A..........................................................2711.00100010000000000000
...................................................................................................................................................................................................T-GAC---TTGAGG--CGTTTTTT-T----AGCGG..............................................................................................................................................................................2411.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................TGCG----TAGAAG---AGAGA----AGTGTGGAGAG---G.............2711.00100000000000010000
......................................................................................................................................................................................................AC---TTGAGG--CGTTTTTT-T----AGCGGC.............................................................................................................................................................................2311.00100000000001000000
.................GCCC-----TATCGTC----------AAATTGA---AATTGGCA.......................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
..............................................TTGA---AATTGGCATTCGGAGATCAACA-AT......................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
............ACATCGCCC-----TATCGTC----------AAATTGA---...............................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
............................................................................................................................................................................................................................T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACA..................................................................................................................................................2811.00100000001000000000
..................................................................................................................................................................................GAA-A------ACATCAT-GAC---TTGAGG--C................................................................................................................................................................................................2111.00100000000000100000
............................................................................................................................................................................................................................................................................................................................................TGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----............................2711.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................TG--AGGAGTGCG----TAGAAG---AGAGA----AGTG........................2611.00100000000100000000
...................................................................................................................................................................................................................................................................................................................................................T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTG........................2711.00100000000000010000
.........................................................................................................................................................................................................................TT-T----AGCGGCAGA----GAAAGCA-TTTCTC........................................................................................................................................................2511.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................TAGAAG---AGAGA----AGTGTGGAGAG---GA-GGA-------T2811.00100000000000001000
........................................................................................................................................................................................................................TTT-T----AGCGGCAGA----GAAAGCA-TTTCTC........................................................................................................................................................2611.00100000000001000000
......................................................................CAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GAC....................................................................................................................................................................................................................................1911.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................T---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGT.........................2711.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................CCACAGCTGGT---T-TG--AGGAGTGCG----TAGA..........................................2711.00100000010000000000
.............................................................................TCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCA.................................................................................................................................................................................................................2511.00100001000000000000
..............................................................................................................................................................................................................................................................................................................................................................TGCG----TAGAAG---AGAGA----AGTGTGGAGAG---GA-...........2811.00100000000000001000
droSec2
TA----------ACATCGCCC-----TATCGCC----------AAATTGA---AATTGGCATTCGGAGATCAACA-AACGTCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TTGAGG--CGATTTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAG---GA-GGA-------TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................C---TTGAGG--CGATTTTT-T----AGCGGCA............................................................................................................................................................................2311.0010010
...................................................................................................................................................................................AA-A------ACATCAT-GAC---TTGAGG--C................................................................................................................................................................................................2011.0010010
.............................................................................................................................................................................................................................................................................................................................................................GTGCG----TAGAAG---AGAGA----AGTGTGGAG...................2511.0010100
...........................................AAATTGA---AATTGGCATTCGGA.................................................................................................................................................................................................................................................................................................................................................2111.0010100
droYak3
TA----------ACATCGCCC-----AATCG------------------A---AATTGGCATTCGAAGATCAACT-ATCGCCGCT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAT---TTGAGG--CGATTTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAGGAGGA-GGA-------TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................A-A------ACATCAT-GAT---TTGAGG--CGA..............................................................................................................................................................................................2111.00101000000000
....................................................................................................................................................................................................................................................A-TTTCTCT-AACAT-TTGTCTTA---------------.........................................................................................................................2111.00101000000000
.....................................................................................................................................................................................................................ATTTTT-T----AGCGGCAGA----GAA...................................................................................................................................................................1911.00101000000000
....................................................................................................................................................................................................................GATTTTT-T----AGCGGCAGA----GA....................................................................................................................................................................1911.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................GCG----TAGAAG---AGAGA----AGTGTGGA....................2211.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................GAGA----AGTGTGGAGAGGAGGA-...........2011.00100000010000
...................................................................................CT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAT---TTGAGG--.................................................................................................................................................................................................2911.00100000010000
.................................................................AAGATCAACT-ATCGCCGCT-----------------AA---------------------------------------------------------------------GACAAGA................................................................................................................................................................................................................................2811.00100000010000
.................................................................................................................................................................................................................................................AGCA-TTTCTCT-AACAT-TTGT............................................................................................................................................2011.00101000000000
......................................................................................................................................................................................................................................................................................................................................................G--AGGAGTGCG----TAGAAG---AG...................................1811.00101000000000
droEre2
TA----------ACA-CGCCC------ATCGTC----------AAATCGA---AATTGGCATTCGGAGATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GACAAGAA-A------ACATCAT-GAC---TAGAGG--CGATTTTT-T----AGCGGCAGA----GAAAGCA-TTTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT---T-TG--AGGAGTGCG----TAGAAG---AGAGA----AGTGTGGAGAG---GA-GGA-------GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................TCGGAGATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GA.....................................................................................................................................................................................................................................2615.0050000005
.............................................................TTCGGAGATCAACA-ATCGCCGTT-----------------AA---------------------------------------------------------------------GA.....................................................................................................................................................................................................................................2713.0030000003
...........................................................................................................................................................................................................................................................................................................................................................................G---AGAGA----AGTGTGGAGAG---GA-GGA-------.2212.0021000100
...............................................................................................................................................................................CAAGAA-A------ACATCAT-GAC---TAGAGG--C................................................................................................................................................................................................2411.0010000100
.......................................................TTGGCATTCGGAGATCAACA-ATCGCCG.................................................................................................................................................................................................................................................................................................................................2711.0010000001
.........................................................................................................................................................................................................................................................................................................................TT-TTTACTTCCCCACAGCTGGT---T-TG--AG.........................................................2711.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................AGA----AGTGTGGAGAG---GA-GGA-------G2011.0010000010
....................................................................................................................................................................................................................................................................................................................................CCCACAGCTGGT---T-TG--AGGAG......................................................2011.0010000100
.................................................................................................................................................................................AGAA-A------ACATCAT-GAC---TAGAGG--CGA..............................................................................................................................................................................................2411.0010000100
......................................................................................................................................................................................................................................................................................................TT-----GTACAT----CTTT-TTTACTTCCCCACAGC........................................................................2811.0011000000
................................................GA---AATTGGCATTCGGAGATCAACA-AT......................................................................................................................................................................................................................................................................................................................................2611.0010000010
.....................................................................................................................................................................................................................................................................................................................................................TG--AGGAGTGCG----TAGAAG---AGAGA----AG..........................2411.0011000000

Generated: 05/18/2015 at 12:21 AM