ID:

dwi_966

 Coordinate:

scf2_1100000004514:835898-836048 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.9 -10.7 -10.7

Flybase annnotation

CDS [Dwil\GK15744-cds]; exon [dwil_GLEANR_15989:6]; intron [Dwil\GK15744-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATTGTCTGTCCATGAAATCTCATTTTTTTTTATACATGCTCTTTAAAATATAAATAGACAAAATTTATACTATCTACATATAATTAACATTTCATTGTTTTGTTTTCATTTTATTGGTTTATTTTGGTTTTCAGATTAATCCATGTACCTAACTTTTTGCATTTATCTACTAATATTTAGTTTCTTTGTTTTATCATCAGGTGGTTGCCTTCCCTTTGGCGCTCACAGTCGACGTCATGCCTGGGAGAAA
**************************************************......(((((((.......................((((......))))................((.(((.((((.....)))).))).))(((((..........)))))......(((((...)))))...))))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
...............................................................................................................................................................................................................................TCACAGTCGACGTCATGCCTG....... 21 0 1 4.00 4 1 3
....................................................................................................................................................................................................................................GTCGACGTCATGCCTGGGAGA.. 21 0 1 2.00 2 1 1
.............................................................................................................................TGGTTTTCAGATTAATCCATG......................................................................................................... 21 0 1 1.00 1 1 0
..TTGTCTGTCCATGAGGTCTCA.................................................................................................................................................................................................................................... 21 2 1 1.00 1 1 0
.......................................................................................................................................................................................................................TTTGGCGCTCACAGTCGACGTT.............. 22 1 1 1.00 1 1 0
............................................................................................................ATTTTATTGGTTTATTTTGGT.......................................................................................................................... 21 0 1 1.00 1 1 0
............................................................................................................ATTTTATTGGTTTGTTTTGGT.......................................................................................................................... 21 1 1 1.00 1 1 0
...............................................................................................................................................................................................TTATCATCAGGTGGTTGCCTT....................................... 21 0 1 1.00 1 1 0
................................................................................................................................................................................................................................CACAGTCGACGTCATGCCTGG...... 21 0 1 1.00 1 0 1
...................................................................................................................................................................................................................................AGTCGACGTCATGCCTGGGA.... 20 0 1 1.00 1 1 0
...............................................................................................................................................................................................TTATCATCAGGTGGTTGCCTTT...................................... 22 1 1 1.00 1 1 0
.................................................................................................................................................................................................................CTTCCCTTTGGCGCTCACAGT..................... 21 0 1 1.00 1 1 0

Anti-sense strand reads

TTAACAGACAGGTACTTTAGAGTAAAAAAAAATATGTACGAGAAATTTTATATTTATCTGTTTTAAATATGATAGATGTATATTAATTGTAAAGTAACAAAACAAAAGTAAAATAACCAAATAAAACCAAAAGTCTAATTAGGTACATGGATTGAAAAACGTAAATAGATGATTATAAATCAAAGAAACAAAATAGTAGTCCACCAACGGAAGGGAAACCGCGAGTGTCAGCTGCAGTACGGACCCTCTTT
**************************************************......(((((((.......................((((......))))................((.(((.((((.....)))).))).))(((((..........)))))......(((((...)))))...))))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M020
head
 M045
female body
 V117
male body		 V118
embryo
.........................................................................................................................................................................................................................ACCGCGAGTGTCAGCTGCAGT............. 21 0 1 2.00 2 2 0 0 0
..........................................................................................................................................................................................................................CCGCGAGTGTCAGCTGCAGTA............ 21 0 1 2.00 2 2 0 0 0
................................................................................................................ATAACCAAATAAAACCAAAAGTC.................................................................................................................... 23 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................................................................TCAGCTGCAGTACGGACCCTC... 21 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................GAAGGGAAACCGCGAGTGTCA..................... 21 0 1 1.00 1 0 0 1 0
...................................................................................................................................................................................................................................TCGGCTGCAGTGCGGACCCT.... 20 2 1 1.00 1 1 0 0 0
..............................................................................................................................CCAAAAGTCTAATTAGGTACA........................................................................................................ 21 0 1 1.00 1 0 1 0 0
..........................................................................................................................................................................................................................CCGCGAGTCGCAGCTGGAGT............. 20 3 2 0.50 1 1 0 0 0
................................................................................................................................................................................................................................CTGTCAGCGGCAGTACGGGC....... 20 3 3 0.33 1 0 0 1 0
......................................................................................TTGTAAAGGAACAAAACATAA................................................................................................................................................ 21 2 5 0.20 1 0 0 0 1
................................................................................................................................................................................................................GGACGGGAAACCGCGACTCT....................... 20 3 8 0.13 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004514:835848-836098 - dwi_966 AATT---GT-------------C-----------TGTCCATGAAATCTC-----ATTTTT---------------------------TTTTATA-C--ATGCTCTTT--AAAATATAAA--------------------------------TAGACAAA---AT----TTATAC-T-ATCTACA-T-----ATAAT--TAACATTTCATT-----------GTTTTGTTTTCATTTTATTGGTT-TATTTTGG--------------------T---------------------------------------------------------------TTTCAGATT-AATCCATGTACCTAA--------------------------------------------------------------------------CT----TTTTGCATTTAT--------------------C--TACTAATAT---TTA-------GTTTCTT---------TGTTTTA------TCAT------CAGGTGGTTGCCTTCCCTTTGGCGCTCACAGTCGACGTCATGCCTGGGAGAAA
droVir3 scaffold_12875:15074153-15074475 - dvi_7043 TGTA----------------------------------AT---------------CTCATTTTTTGTGTACAGCTATA-----TACA---TACC-T--ATATTTTTTATACAAAA------------------------------------TACATACACAAAT----CTAAAC-A-ATGTAAGAA-----ATAAT--CTACTTTTAAGT---------GTCTTTTGTTCTTT--TTTTTTGTT-TGTTTTAAATTGCAGCGAATGAA--TGA------A-ATTCT--G-ATTAA----CG--------CAAGTGAA---------------------AGAACGTCCAGTGCATGCCCTGTA--------------------------------TATATATATATATA-----------------------TTTATGT----TTCTGTGCAT-----T--TC----------CATTGTTT---TTC---CCA-------ATTAAAT---------TGTCATTTT----GATGCGGTTTCAACAGGTTGCCTGCCATTTGGCACACACAATCGCCGGCATGCCTGGGAGAAG
droMoj3 scaffold_6496:8767151-8767475 + AAAC---AA-------------A-----------CATA-----------------------------------------------CA---TCA---ATATA-TTTTTATACAAAA------------------------------------TACATATACACATAAATTTATAC-GTATGTAAGAA-----ATAATCTCTATTCTTAAAT---------GTCTTTTGTTTACCTTGTATTGATT-TCTTTGATATTGCAGCGAATGAAATTGATGCAAA----------------------GTCAA-------------------------------ATGCTGCTG-CATGAATGAT----CGTAA-G-A-----G----CTGCATGGCGTGTACATACATATATATA-------------------TATATCCATGTTC---TCTGTGTTTGTAACA-------------------CTT---TTA---TTA-------CTTGATT---------TTACCTG-TTCAATTTTGTGATTCAACAGGTTGCCTGCCCTTTGGCACACACAACCGCCGTCATGCCTGGGAGAAG
droGri2 scaffold_15245:8245716-8246057 + ACTA---TC-------------T--------------------------------ACAACATTTA------------------TACA---TACA-T--ATATTTTTTATACAAAA------------------------------------TACATACACAAAT----CTTTAC-A-ATTTATGAA-----TTAAC--ATACACTTAAGT---------GTCTTTTGTTTT-----TTTCGTTT-CGTTTCGATTTGCAGCGCATGAA--TGA------ATATTCA--CAATTAAAACTCG--------CATGTGAC--------------------------------------------A-----------GTGTCGACTGCATGTCCTGTACATATATGTATATAATCCTTATTATATAAAACATGTATATATGTTCGTTGTTGTTTCTGTGTGT--TT----------TGTGTT-T---TTT---CGT-------ATTAAAC---------TGTTATT-T----GGTGCGGTTTCAACAGGTTGCCTGCTATTTGGTACACACAATCGCCGGCATGCCTGGGAGAAG
dp5 3:10918552-10918885 - AATT---AT-------------T-----------TGAATGCTAATCATC-----GGTTGCCTTTTTTGATG-------CTTTC----TTTTGTA-TACAC-------------AA------------------------------------CAGACAAACACCT----TTATGC-A-ATATACAACAATACATT--TTCTAAATTTAAGT---------GTGTTCTGTTTTCG--TTTATGGTT-TGTTTCAG--------------------TGCAAAAT--TCACACA---ACTACTCGTAAGAGAGCATGTAAGAGCGTGTCGCGTGTCGCGTGTCGCGCGTCTAATGCATGGTCTGTTAA---G-T----GCACCTCTC--------------------------------------------------C---T----TTTTATGCCC-AG-------------------A--AACTCAT---CCA-----------AAATC---------ATTCATT------TTAACAT---TCTCAGGTTGTCTGCCTTTTGGCGCCCGCAGTCGGCGTCATGCCTGGGAGAAG
droPer2 scaffold_4:6242125-6242450 - AATT---AT-------------T-----------TGAATGCTAATCATC-----GGTTGCCTTTTTTGGTG-------CTTT-----TTTTGCA-TACAC-------------AA------------------------------------CAGACAAACCCCT----TTATGC-A-ATATACAACAATACATT--TTCTAAATTTAAGT---------GTGTTCTGTTTTCG--TTTATGGTT-TGTTTCAG--------------------TGCAAAAT--TCACACA---ACTACTCGTAAGAGAGCATGTAAGAGCGTGTCGC-------GTGTCGCGCGTCTAATGCATGGTCTGTTAA---G-T----GCACCTCTC--------------------------------------------------C---T----TTTTATGTCC-AG-------------------A--AACTCAT---CCA-----------AAATC---------ATTGACT------TTAACA---TTCACAGGTTGCCTGCCTTTTGGCGCCCGCAGTCGGCGTCATGCCTGGGAGAAG
droAna3 scaffold_13266:15349032-15349341 + ATCT---TT-------------T-----------TGTAAG----------------TTGCATTCCGTGTAC---------------------------ATACTTTAT--GATTTATATCCAAATTAAAACGTGATCTGTACTCAATTAAAATAT---GGTATCT----TTAGATCA-TTTTCCG-----------T--TTGTCTTAAAATACTTTTAAAATATTCTGATTTTG--TTTCCTGTTTTGTTCCAG-----------------------------------------------------------------------------------------------ATGCATGAACACTCTAAA-G-G------ACTTTTA--------------------------------------------------AATGT----CGTTGTGAATGT------GTCTTTAAAACTAGA--ATCTCAT---AAAA-CATTT--TCTAATC---------A-TAGCT-T----CATGTTGTACTCCTAGGTTGCATGCCCTTTGGCGGCAGGAGTCGACGCCACGCATGGGAAAAA
droBip1 scf7180000396547:1702309-1702600 - GTGT---AC-----------------------------------------------------------------------------------------ATACTGTAT--GATTTGTAACTAAATTAAAATGTGCTTTGTATTCAATTAAAATAT---TGTATCT----TTAGAACA-TTTTACG-----------T--TTGTTTTTAATTATATTTAAATTATTCTGATTTCG--TTTCCTGTTTTGTT----------------------------------------------------------------------------------------CCGCAGGTC-ATTGCATGAACTTTCTAAA-G-GATTT------GTGCATGT---------------------------------------------CGTG------------AATGT------TTCTTTTAAACTAAAGACTC---TAA---AT-CTTTTAAACTAATC---------A-TAGCT-T----CGTGTTGTACTCCTAGGTTGCAATCCGTTTGGCGGTAGAAGTCGACGACATGCATGGGAAAAG
droKik1 scf7180000302476:2828219-2828520 + TCCT---TC-------------CATCCACTAAATTGTACTTAATTCTTATTTTGTGTTGCAT--------------------------------------T-CTTTTATATAAAA------------------------------------TACATGAGCATA--------AAC-A-ATTTACG-----------T--TAATCTTTAAG-----------CACTCTGTTTTCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TTTGCATGAACTACC--G--GGGAATCTGTA----T--------------------------------------------------AGTGTTC---TCTGTGCCCGTGAATGTGC----------CATGGCGA---TAG---TTATT-----GTTAATCGTATCAACCTCCTCCT-C----CCAACATTTCCCACAGGTTGCCTGCCATTTGGGTCTCGGAGCCGTCGGCATGCGTGGGAAAAG
droFic1 scf7180000453858:893257-893531 - AATT---TT-------------T-----------TGTA------------------TCACATTTAGTGTTC-----------A----TTTTATA-C--AAACCCCTTATACA-AA------------------------------------TACATATTCATTC----CTCTAC-A-ATTTTCG-----------T--TTATCTTTAAGT---------GTCTTATGTTGTCG--CCTTCGGTT-TGTTTCAG--------------------TGGACG----------------------CCAAT-------------------------------TCCCAGATC-TATGCATGAACTAAA--GG-GGGAATGAGTTT------------------------------------------------------------------TATGCG-GCGAAT--CT-----------CTGGCAA---TCG---TTA-------GTAATTC---------CATAATC------CACACATTTTCTACAGGTTGCCTTCCCTTCGGAGCTCGGAGTCGTCGACACGCGTGGGAGAAG
droEle1 scf7180000491107:1239422-1239693 - ACTT------------------------------------------------------------AGTTTTC----------CA----TATTATA-C--AAACCCTTTATTAAAAA------------------------------------TACACAAGTGTAA----CTAAAA-C-ATTTACG-----------T--TTCTATTTAAGT---------CTCTTCTGTTTTCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------GCAGA-------------------------------GCGCAGATC-TATGCATGAATTCAAAAAA-GGATATAGGATATATC--------------------------------------------------AGTGT----TTTAGTGCACCT-------------------AAGGCAA---TCG---GTT-------GTTAATC---------TCCAATC-T----CCAACATATCCCACAGGTTGCCTGCCATTCGGAGCTCGCAGTCGTCGCCATGCGTGGGAGAAG
droRho1 scf7180000777200:36845-37137 + AAATA--TC-------------T-----------TGTAACTA-AATTCA-----TGTTGCATTTAGCATTC----------CC----TTTTATA-C--AAATCTTTTATAAAAAA------------------------------------TACACAAGCATGA----TATAAA-A-AATTTCG-----------T--TCATATATTTAT---------A-----------TA--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGATTTAAG--AG-GGAAATAGTATCTAGC--------------------------------------------------TGTGT----TTTTGTGCACCAGAAT--CT----------TAAGGCAT---CCG---TTA-------GTTAATC---------CCCAATA------CCAACATTTTCCGCAGGTTGCCTTCCATTCGGAGCCCGCAGTCGTCGCCATGCATGGGAGAAG
droBia1 scf7180000301506:851362-851659 - AATTATATT-------------T-----------TGTAACTAAAATTGC-----GTTCGCATTTACTGTTC----------CA----TATT----------------AAACAAAA------------------------------------TACATAAGAATAC----CTACAA-A-ATGTACC--------TT--TTTTGTCATTAAGA---------GTCTTATGTTTTTG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGAAGATC-TAAGCATGAACTAAA--AAGGGGAATGCGATCTCTC--------------------------------------------------AGTGT----TGTTGTGCCCGTTGAT--CT----------CATGACAA---TTA---TTA-------ATTAATC---------CGTAATC------CCCACATTTCCCACAGGTTGCCTGCCCTTTGGTGCGCGCAGTCGTCGTCACGCCTGGGAGAAG
droTak1 scf7180000415870:411876-412177 - AATT---TT-------------T-----------TGTAACTAAAATTTA-----TATTGCATTTAGTGTTC----------CG----CATTATA-C--AAACCCCTTATACAAAA------------------------------------TACATAAGCATAT----CTACAA-A-ATTTACG-----------T--TTGTCATTAAGA---------CGCTTCTGTTTTCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATCTTATGCATGAACTAAA--AG-GGGAATGGGATTTCTA--------------------------------------------------AGTGT----T---GTGCCCGTTGAT--CT----------CATGGCAA---TTG---TTA-------GTTAACC---------CGTAAAA------CCAACATTTCCCACAGGTTGCCTTCCCTTTGGAGCCCGCAGTCGTCGTCACGCGTGGGAGAAA
droEug1 scf7180000409209:324783-325088 - ATTT---TG-------------T-----------TGTAACTAAAATTTG-----TATCACATTTAGTGTTC----------GA----TATTATAACACAAACCTTATATACAAAA------------------------------------TACATAAGCATAT----TTACAA-A-AATTATG-----------T--TTATCTTTAAGT---------GTATTCTGTTTTTG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGAGCTAAA--A--GGGAAAGACATCTCTC--------------------------------------------------TGTGT----TTCTGTGCCAGTGAAT--CT----------CATGACAA---TTG---TTA-------GTTAATC---------CGTAATC------CCGACATATCCCACAGGTTGTTTCCCCTTTGGAGCCCGCAGTCGTCGTCACGCGTGGGAGAAA
dm3 chr2R:5850447-5850749 + AACTT--TA-------------T-----------TGTAATTAAAATTTA-----TACCGCATTTA-TA-TA----------CA----AATTATA-TACAA-CTTTTTATACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-ATTTACG-----------T--TTATCCTTAAGT---------GTATTCTGTTTTCG--TTTTTGGTT-TGTTCCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGAACTAAG--AA-GGGAATGGGGTGAC-T--------------------------------------------------AGTGT----TATTGCTCATATAAAT--CC----------CATGGTAA---TTG---TTA-------GTTAATC---------AGTTGTA------CCAACATATCCCACAGGTTGCCTGCCTTTCGGAGCACGCGGTCGTCGCCACGCGTGGGAGAAA
droSim2 2r:6626966-6627270 + dsi_9975 ACTT---TA-------------T-----------TGTAATTAAAATTTA-----TACCGCATTTAGTGTTT----------CA----AATTATA-TACAAA-TTTTTATACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-ATTTACG-----------T--TTATCCTTAAGT---------GTATTCTGTTTTCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGAACTAAG--AA-GGGAATGGGATT-GGC--------------------------------------------------AGTGT----TGTTGCTCATATAAAT--CC----------CATGGTAT---TTAT--TAA-------GTTAATC---------AGTTAAA------CCAACATATTCCACAGGTTGCCTGCCTTTCGGAGCCCGCAGTCGTCGCCACGCGTGGGAGAAA
droSec2 scaffold_1:3460257-3460561 + ACTT---TA-------------T-----------TGTAATTAAAATTTA-----TACCGCATTTAGTGTTT----------CA----AATTATA-TACAAA-TTTTTATACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-ATTTACG-----------T--TTATCCTTAAGT---------GTATTCTGTTTTCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGAACTAAG--AA-GGGAATGGGATT-GGC--------------------------------------------------AGTGT----TGTTGCTCATATAAAT--CC----------AATGGTAT---TTGT--TTA-------GTTAATC---------AGTTAAA------CCAACATATTCCACAGGTTGCCTGCCTTTCGGAGCCCGCAGTCGTCGCCACGCGTGGGAGAAA
droYak3 2L:18477736-18478048 + TATT---TTTTGTTCAACATTTT-----------TGTAACTAAAATTTA-----TACCGCATTTAGTGTTT----------CA----AATTATA-C--A---GTTTTATACAAAA------------------------------------TACATAAGCATAC----CTAAAA-A-ATTTCCG-----------T--TTATCCTTAAGT---------GTATTCTGTTTTCG--TTATCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGAACTATG--AA-TGGAATGGGGCT-TCC--------------------------------------------------AGTGT----AATTGCTCATATAAAT--CC----------TATGGTAA---TTG---TTA-------GATAATC---------AATTATA------ACCACATATCTCACAGGTTGCCTCCCCTTTGGCGCTCGCAGTCGTCGTCACGCGTGGGAGAAA
droEre2 scaffold_4929:8517483-8517773 - T---------------------T-----------TGTAACTAAAATTTA-----TACCGCATTTAGTGTTT----------CG----AATTATA-TACACA-GTTTTATACAAAA------------------------------------TACATAAGCA-AC----CTACAA-A-ATTTACG-----------T--TTATCCTTAAGT---------GTATTCTGTTTCCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------TCAGA-------------------------------TCGCAGATT-TATGCATGAACTGTA--AA-GGGAATGGCATTTC-C--------------------------------------------------AGTGT----TGTTGCTCATATA----------------------CAT---TTGTTAATT-------GTTAATC---------AGTTATA------CCAACATATCCCACAGGTTGCCTCCCTTTTGGAGCCCGCAGTCGTCGTCACGCGTGGGAGAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AATT---GT-------------C-----------TGTCCATGAAATCTC-----ATTTTT---------------------------TTTTATA-C--ATGCTCTTT--AAAATATAAA--------------------------------TAGACAAA---AT----TTATAC-T-ATCTACA-T-----ATAAT--TAACATTTCATT-----------GTTTTGTTTTCATTTTATTGGTT-TATTTTGG--------------------T---------------------------------------------------------------TTTCAGATT-AATCCATGTACCTAA--------------------------------------------------------------------------CT----TTTTGCATTTAT--------------------C--TACTAATAT---TTA-------GTTTCTT---------TGTTTTA------TCAT------CAGGTGGTTGCCTTCCCTTTGGCGCTCACAGTCGACGTCATGCCTGGGAGAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGTCGACGTCATGCCTG.......2114.00431000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGTCATGCCTGGGAGA..2112.00211000
..........................................................................................................................................................................................................................................................TGG--------------------T---------------------------------------------------------------TTTCAGATT-AATCCATG............................................................................................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCGCTCACAGTCGACGTT..............2211.00101000
........................................................................................................................................................................................................................................ATTTTATTGGTT-TATTTTGG--------------------T---------------------------------------------------------------..............................................................................................................................................................................................................................................................2111.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA------TCAT------CAGGTGGTTGCCTT.......................................2111.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGTCGACGTCATGCCTGG......2111.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGACGTCATGCCTGGGA....2011.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA------TCAT------CAGGTGGTTGCCTTT......................................2211.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCCTTTGGCGCTCACAGT.....................2111.00101000
droVir3
TGTA----------------------------------AT---------------CTCATTTTTTGTGTACAGCTATA-----TACA---TACC-T--ATATTTTTTATACAAAA------------------------------------TACATACACAAAT----CTAAAC-A-ATGTAAGAA-----ATAAT--CTACTTTTAAGT---------GTCTTTTGTTCTTT--TTTTTTGTT-TGTTTTAAATTGCAGCGAATGAA--TGA------A-ATTCT--G-ATTAA----CG--------CAAGTGAA---------------------AGAACGTCCAGTGCATGCCCTGTA--------------------------------TATATATATATATA-----------------------TTTATGT----TTCTGTGCAT-----T--TC----------CATTGTTT---TTC---CCA-------ATTAAAT---------TGTCATTTT----GATGCGGTTTCAACAGGTTGCCTGCCATTTGGCACACACAATCGCCGGCATGCCTGGGAGAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................TTTTTTGTGTACAGCTATA-----TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
........................................................TCATTTTTTGTGTACAGCTATA-----TACA---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
..........................................................ATTTTTTGTGTACAGCTATA-----TAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGCAGCGAATGAA--TGA------A-ATTCT--G-AT...........................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACAATCGCCGGCAT............1911.001100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................A-ATTCT--G-ATTAA----CG--------CAAGTGA...................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
.......................................T---------------CTCATTTTTTGTGTACAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTT----GATGCGGTTTCAACAG...............................................2111.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
AAAC---AA-------------A-----------CATA-----------------------------------------------CA---TCA---ATATA-TTTTTATACAAAA------------------------------------TACATATACACATAAATTTATAC-GTATGTAAGAA-----ATAATCTCTATTCTTAAAT---------GTCTTTTGTTTACCTTGTATTGATT-TCTTTGATATTGCAGCGAATGAAATTGATGCAAA----------------------GTCAA-------------------------------ATGCTGCTG-CATGAATGAT----CGTAA-G-A-----G----CTGCATGGCGTGTACATACATATATATA-------------------TATATCCATGTTC---TCTGTGTTTGTAACA-------------------CTT---TTA---TTA-------CTTGATT---------TTACCTG-TTCAATTTTGTGATTCAACAGGTTGCCTGCCCTTTGGCACACACAACCGCCGTCATGCCTGGGAGAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ACTA---TC-------------T--------------------------------ACAACATTTA------------------TACA---TACA-T--ATATTTTTTATACAAAA------------------------------------TACATACACAAAT----CTTTAC-A-ATTTATGAA-----TTAAC--ATACACTTAAGT---------GTCTTTTGTTTT-----TTTCGTTT-CGTTTCGATTTGCAGCGCATGAA--TGA------ATATTCA--CAATTAAAACTCG--------CATGTGAC--------------------------------------------A-----------GTGTCGACTGCATGTCCTGTACATATATGTATATAATCCTTATTATATAAAACATGTATATATGTTCGTTGTTGTTTCTGTGTGT--TT----------TGTGTT-T---TTT---CGT-------ATTAAAC---------TGTTATT-T----GGTGCGGTTTCAACAGGTTGCCTGCTATTTGGTACACACAATCGCCGGCATGCCTGGGAGAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATT-T----GGTGCGGTTTCAACAG...............................................2111.00110
.............................................................................................................................................................................................................TAAGT---------GTCTTTTGTTTT-----TTTC...............................................................................................................................................................................................................................................................................................................................................................2111.00110
dp5
AATT---AT-------------T-----------TGAATGCTAATCATC-----GGTTGCCTTTTTTGATG-------CTTTC----TTTTGTA-TACAC-------------AA------------------------------------CAGACAAACACCT----TTATGC-A-ATATACAACAATACATT--TTCTAAATTTAAGT---------GTGTTCTGTTTTCG--TTTATGGTT-TGTTTCAG--------------------TGCAAAAT--TCACACA---ACTACTCGTAAGAGAGCATGTAAGAGCGTGTCGCGTGTCGCGTGTCGCGCGTCTAATGCATGGTCTGTTAA---G-T----GCACCTCTC--------------------------------------------------C---T----TTTTATGCCC-AG-------------------A--AACTCAT---CCA-----------AAATC---------ATTCATT------TTAACAT---TCTCAGGTTGTCTGCCTTTTGGCGCCCGCAGTCGGCGTCATGCCTGGGAGAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................TGAATGCTAATCATC-----GGTTGCCTTTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
droPer2
AATT---AT-------------T-----------TGAATGCTAATCATC-----GGTTGCCTTTTTTGGTG-------CTTT-----TTTTGCA-TACAC-------------AA------------------------------------CAGACAAACCCCT----TTATGC-A-ATATACAACAATACATT--TTCTAAATTTAAGT---------GTGTTCTGTTTTCG--TTTATGGTT-TGTTTCAG--------------------TGCAAAAT--TCACACA---ACTACTCGTAAGAGAGCATGTAAGAGCGTGTCGC-------GTGTCGCGCGTCTAATGCATGGTCTGTTAA---G-T----GCACCTCTC--------------------------------------------------C---T----TTTTATGTCC-AG-------------------A--AACTCAT---CCA-----------AAATC---------ATTGACT------TTAACA---TTCACAGGTTGCCTGCCTTTTGGCGCCCGCAGTCGGCGTCATGCCTGGGAGAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................GT---------GTGTTCTGTTTTCG--TTTATG..............................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................................TGAATGCTAATCATC-----GGTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................................................................CTTT-----TTTTGCA-TACAC-------------AA------------------------------------CAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
droAna3
ATCT---TT-------------T-----------TGTAAG----------------TTGCATTCCGTGTAC---------------------------ATACTTTAT--GATTTATATCCAAATTAAAACGTGATCTGTACTCAATTAAAATAT---GGTATCT----TTAGATCA-TTTTCCG-----------T--TTGTCTTAAAATACTTTTAAAATATTCTGATTTTG--TTTCCTGTTTTGTTCCAG-----------------------------------------------------------------------------------------------ATGCATGAACACTCTAAA-G-G------ACTTTTA--------------------------------------------------AATGT----CGTTGTGAATGT------GTCTTTAAAACTAGA--ATCTCAT---AAAA-CATTT--TCTAATC---------A-TAGCT-T----CATGTTGTACTCCTAGGTTGCATGCCCTTTGGCGGCAGGAGTCGACGCCACGCATGGGAAAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................TA--------------------------------------------------AATGT----CGTTGTGAATGT------G..................................................................................................................................2011.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTTGTACTCCTAGGTTGCATGCCCTT..................................2911.001100000
..................................TGTAAG----------------TTGCATTCCGTGTAC---------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----CATGTTGTACTCCTAGGTTG...........................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAGTCGACGCCACGCATG.......2111.001100000
droBip1
GTGT---AC-----------------------------------------------------------------------------------------ATACTGTAT--GATTTGTAACTAAATTAAAATGTGCTTTGTATTCAATTAAAATAT---TGTATCT----TTAGAACA-TTTTACG-----------T--TTGTTTTTAATTATATTTAAATTATTCTGATTTCG--TTTCCTGTTTTGTT----------------------------------------------------------------------------------------CCGCAGGTC-ATTGCATGAACTTTCTAAA-G-GATTT------GTGCATGT---------------------------------------------CGTG------------AATGT------TTCTTTTAAACTAAAGACTC---TAA---AT-CTTTTAAACTAATC---------A-TAGCT-T----CGTGTTGTACTCCTAGGTTGCAATCCGTTTGGCGGTAGAAGTCGACGACATGCATGGGAAAAGSizeHit CountTotal NormTotal
No Reads
droKik1
TCCT---TC-------------CATCCACTAAATTGTACTTAATTCTTATTTTGTGTTGCAT--------------------------------------T-CTTTTATATAAAA------------------------------------TACATGAGCATA--------AAC-A-ATTTACG-----------T--TAATCTTTAAG-----------CACTCTGTTTTCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TTTGCATGAACTACC--G--GGGAATCTGTA----T--------------------------------------------------AGTGTTC---TCTGTGCCCGTGAATGTGC----------CATGGCGA---TAG---TTATT-----GTTAATCGTATCAACCTCCTCCT-C----CCAACATTTCCCACAGGTTGCCTGCCATTTGGGTCTCGGAGCCGTCGGCATGCGTGGGAAAAGSizeHit CountTotal NormTotal
No Reads
droFic1
AATT---TT-------------T-----------TGTA------------------TCACATTTAGTGTTC-----------A----TTTTATA-C--AAACCCCTTATACA-AA------------------------------------TACATATTCATTC----CTCTAC-A-ATTTTCG-----------T--TTATCTTTAAGT---------GTCTTATGTTGTCG--CCTTCGGTT-TGTTTCAG--------------------TGGACG----------------------CCAAT-------------------------------TCCCAGATC-TATGCATGAACTAAA--GG-GGGAATGAGTTT------------------------------------------------------------------TATGCG-GCGAAT--CT-----------CTGGCAA---TCG---TTA-------GTAATTC---------CATAATC------CACACATTTTCTACAGGTTGCCTTCCCTTCGGAGCTCGGAGTCGTCGACACGCGTGGGAGAAGSizeHit CountTotal NormTotal
No Reads
droEle1
ACTT------------------------------------------------------------AGTTTTC----------CA----TATTATA-C--AAACCCTTTATTAAAAA------------------------------------TACACAAGTGTAA----CTAAAA-C-ATTTACG-----------T--TTCTATTTAAGT---------CTCTTCTGTTTTCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------GCAGA-------------------------------GCGCAGATC-TATGCATGAATTCAAAAAA-GGATATAGGATATATC--------------------------------------------------AGTGT----TTTAGTGCACCT-------------------AAGGCAA---TCG---GTT-------GTTAATC---------TCCAATC-T----CCAACATATCCCACAGGTTGCCTGCCATTCGGAGCTCGCAGTCGTCGCCATGCGTGGGAGAAGSizeHit CountTotal NormTotal
No Reads
droRho1
AAATA--TC-------------T-----------TGTAACTA-AATTCA-----TGTTGCATTTAGCATTC----------CC----TTTTATA-C--AAATCTTTTATAAAAAA------------------------------------TACACAAGCATGA----TATAAA-A-AATTTCG-----------T--TCATATATTTAT---------A-----------TA--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGATTTAAG--AG-GGAAATAGTATCTAGC--------------------------------------------------TGTGT----TTTTGTGCACCAGAAT--CT----------TAAGGCAT---CCG---TTA-------GTTAATC---------CCCAATA------CCAACATTTTCCGCAGGTTGCCTTCCATTCGGAGCCCGCAGTCGTCGCCATGCATGGGAGAAGSizeHit CountTotal NormTotal
No Reads
droBia1
AATTATATT-------------T-----------TGTAACTAAAATTGC-----GTTCGCATTTACTGTTC----------CA----TATT----------------AAACAAAA------------------------------------TACATAAGAATAC----CTACAA-A-ATGTACC--------TT--TTTTGTCATTAAGA---------GTCTTATGTTTTTG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGAAGATC-TAAGCATGAACTAAA--AAGGGGAATGCGATCTCTC--------------------------------------------------AGTGT----TGTTGTGCCCGTTGAT--CT----------CATGACAA---TTA---TTA-------ATTAATC---------CGTAATC------CCCACATTTCCCACAGGTTGCCTGCCCTTTGGTGCGCGCAGTCGTCGTCACGCCTGGGAGAAGSizeHit CountTotal NormTotal
No Reads
droTak1
AATT---TT-------------T-----------TGTAACTAAAATTTA-----TATTGCATTTAGTGTTC----------CG----CATTATA-C--AAACCCCTTATACAAAA------------------------------------TACATAAGCATAT----CTACAA-A-ATTTACG-----------T--TTGTCATTAAGA---------CGCTTCTGTTTTCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATCTTATGCATGAACTAAA--AG-GGGAATGGGATTTCTA--------------------------------------------------AGTGT----T---GTGCCCGTTGAT--CT----------CATGGCAA---TTG---TTA-------GTTAACC---------CGTAAAA------CCAACATTTCCCACAGGTTGCCTTCCCTTTGGAGCCCGCAGTCGTCGTCACGCGTGGGAGAAASizeHit CountTotal NormTotal
No Reads
droEug1
ATTT---TG-------------T-----------TGTAACTAAAATTTG-----TATCACATTTAGTGTTC----------GA----TATTATAACACAAACCTTATATACAAAA------------------------------------TACATAAGCATAT----TTACAA-A-AATTATG-----------T--TTATCTTTAAGT---------GTATTCTGTTTTTG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGAGCTAAA--A--GGGAAAGACATCTCTC--------------------------------------------------TGTGT----TTCTGTGCCAGTGAAT--CT----------CATGACAA---TTG---TTA-------GTTAATC---------CGTAATC------CCGACATATCCCACAGGTTGTTTCCCCTTTGGAGCCCGCAGTCGTCGTCACGCGTGGGAGAAASizeHit CountTotal NormTotal
No Reads
dm3
AACTT--TA-------------T-----------TGTAATTAAAATTTA-----TACCGCATTTA-TA-TA----------CA----AATTATA-TACAA-CTTTTTATACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-ATTTACG-----------T--TTATCCTTAAGT---------GTATTCTGTTTTCG--TTTTTGGTT-TGTTCCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGAACTAAG--AA-GGGAATGGGGTGAC-T--------------------------------------------------AGTGT----TATTGCTCATATAAAT--CC----------CATGGTAA---TTG---TTA-------GTTAATC---------AGTTGTA------CCAACATATCCCACAGGTTGCCTGCCTTTCGGAGCACGCGGTCGTCGCCACGCGTGGGAGAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................AACTAAG--AA-GGGAATGGG.......................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000001000000000000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGTCGTCGCCACGCGTGG......2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCATGAACTAAG--AA-GGGAATG.........................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTGCCTGCCTTTCGGAGCACGCG.......................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TATA-TACAA-CTTTTTATACAAAA------------------------------------TA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TAATTAAAATTTA-----TACCGCATTTA-TA-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TT--TA-------------T-----------TGTAATTAAAATTTA-----TACCGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTTCGGAGCACGCGGT.....................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TGGGGTGAC-T--------------------------------------------------AGTGT----TATTGC...............................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...TT--TA-------------T-----------TGTAATTAAAATTTA-----TACCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....T--TA-------------T-----------TGTAATTAAAATTTA-----TACCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCGCCACGCGTGGGAGA..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000
.............................................................................................................................................................................................................................................................................................................................................................TGCATGAACTAAG--AA-GGGAATG.........................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GAACTAAG--AA-GGGAATGGGGTT....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
........................................TAAAATTTA-----TACCGCATTTA-T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TATACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-T.............................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................TACATAAGCATAC----AAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................C-TATGCATGAACTAAG--AA-GGG.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGTTGCCTGCCTTTCGGAGCACG.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.......................................................................................................................................................................................................TATCCTTAAGT---------GTATTCTGTT..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TTTTATACAAAA------------------------------------TACATAAGCATAC----AAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TATCCTTAAGT---------GTATTCTGTTTTCG--TT..................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GGAATGGGGTGAC-T--------------------------------------------------AGTGT----TATTGCTC.............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TA..................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TCTGTTTTCG--TTTTTGGTT-TG........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TATACAAAA------------------------------------TACATAAGCATAC----AAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AAG--AA-GGGAATGGGGTGAC-T--------------------------------------------------A.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--CC----------CATGGTAA---TTG---TTA-------GT..........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TCCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGA.......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCTTTCGGAGCACGCGG......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATGGGGTGAC-T--------------------------------------------------AGTGT----TATTG................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................A------------------------------------TACATAAGCATAC----AAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CACG----------------------CCAGA-------------------------------TCGCAGATC-TAT.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.........................................................................................TTATA-TACAA-CTTTTTATACAAAA------------------------------------TACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGT.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................TATACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-..............................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCTGCCTTTCGGAGCACGCG.......................2311.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTCGGAGCACGCGGTCGTCGCC..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................ACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-A.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAA---TTG---TTA-------GTTAATC---------AGT.........................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATACAAAA------------------------------------TACATAAGCATAC----AAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AATTAAAATTTA-----TACCGCATTTA-TA-TA----------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................ACTAAG--AA-GGGAATGGGGTGA...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TGCATGAACTAAG--AA-GGGAATGGGG......................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................A-TACAA-CTTTTTATACAAAA------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TTTTATACAAAA------------------------------------TACATAAGCATAC----A......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TA----------CA----AATTATA-TACAA-CTTTTTATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCCACGCGTGGGAGA..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TACAAAA------------------------------------TACATAAGCATAC----A......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TA-----TACCGCATTTA-TA-TA----------CA----AATTATA-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................ACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-AAA...........................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTGCCTGCCTTTCGGAGC............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TTATA-TACAA-CTTTTTATACAAAA------------------------------------TAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................ATGAACTAAG--AA-GGGAATGGGG......................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCTTTCGGAGCACGCGGT.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................TACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-A.............................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGGAGCACGCGGTCGTCG................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GAATGGGGTGAC-T--------------------------------------------------AGTGT----TAT..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................GGGTGAC-T--------------------------------------------------AGTGT----TATTGCTC.............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCCTTTCGGAGCACGCGGTCGT..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TACAA-CTTTTTATACAAAA------------------------------------TACATAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TA-------------T-----------TGTAATTAAAATTTA-----TA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGCCACGCGTGGGAGTT.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................................TAAG--AA-GGGAATGGGGTGAC-T--------------------------------------------------AGTG..........................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTTCGGAGCACGCGGTC....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACGCGGTCGTCGCCACG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTCGGAGCACGCGGT.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TATCCTTAAGT---------GTATTCTGTTTTCG--T...................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CAAAA------------------------------------TACATAAGCATAC----AAACAA-A-AAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................A-CTTTTTATACAAAA------------------------------------TACATAAGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AACTAAG--AA-GGGAATGGGGT.....................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTCGGAGCACGCGGTC....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................T-TGTTCCAG--------------------TGCACG----------------------CCAGA-------------------------------T.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TATGCATGAACTAAG--AA-GGGA............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................TACAA-CTTTTTATACAAAA------------------------------------TACATAAGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACTT---TA-------------T-----------TGTAATTAAAATTTA-----TACCGCATTTAGTGTTT----------CA----AATTATA-TACAAA-TTTTTATACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-ATTTACG-----------T--TTATCCTTAAGT---------GTATTCTGTTTTCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGAACTAAG--AA-GGGAATGGGATT-GGC--------------------------------------------------AGTGT----TGTTGCTCATATAAAT--CC----------CATGGTAT---TTAT--TAA-------GTTAATC---------AGTTAAA------CCAACATATTCCACAGGTTGCCTGCCTTTCGGAGCCCGCAGTCGTCGCCACGCGTGGGAGAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................TACATAAGCATAC----AAACAA-A-ATTTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2514.00400000000000004000
.......TA-------------T-----------TGTAATTAAAATTTA-----TACCGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000000000003000
............................................................................................TA-TACAAA-TTTTTATACAAAA------------------------------------TACATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000021000000000
................................................................................................................AAA------------------------------------TACATAAGCATAC----AAACAA-A-ATT...........................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000000002000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAGCCCGCAGTCGTCGCC..............2111.00110000000000000000
.......................................................................................................................................................TACATAAGCATAC----AAACAA-A-AAA...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................A-GGGAATGGGATT-GGC--------------------------------------------------AG............................................................................................................................................................1811.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................TGAACTAAG--AA-GGGAATGGGATT-GGC--------------------------------------------------..............................................................................................................................................................2611.00100000010000000000
...........................................................................................................................................................TAAGCATAC----AAACAA-A-ATTTACG-----------T--T........................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
......................................................TACCGCATTTAGTGTTT----------CA----AATTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
........................................................................................................................................................................................................................................................TTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGC..........................................................................................................................................................................................................................................................2011.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TATGCATGAACTAAG--AA-GGGA............................................................................................................................................................................................................................2111.00100000010000000000
.......TA-------------T-----------TGTAATTAAAATTTA-----TACCGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..........................................................................................................TATACAAAA------------------------------------TACATAAGCATAC----AAACAA-................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
.........................................................................................................TTATACAAAA------------------------------------TACATAAGCATAC----AAACAA-................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGAGCCCGCAGTCGTCGC...............2111.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................TGAACTAAG--AA-GGGAATGGG.......................................................................................................................................................................................................................2011.00110000000000000000
.............................................TTTA-----TACCGCATTTAGTGTTT----------CA----AA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
droSec2
ACTT---TA-------------T-----------TGTAATTAAAATTTA-----TACCGCATTTAGTGTTT----------CA----AATTATA-TACAAA-TTTTTATACAAAA------------------------------------TACATAAGCATAC----AAACAA-A-ATTTACG-----------T--TTATCCTTAAGT---------GTATTCTGTTTTCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGAACTAAG--AA-GGGAATGGGATT-GGC--------------------------------------------------AGTGT----TGTTGCTCATATAAAT--CC----------AATGGTAT---TTGT--TTA-------GTTAATC---------AGTTAAA------CCAACATATTCCACAGGTTGCCTGCCTTTCGGAGCCCGCAGTCGTCGCCACGCGTGGGAGAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................TCGGTT-TGTTTCAG--------------------TGCACG----------------------C.................................................................................................................................................................................................................................................................................................2111.0011000
...........................................................................................................................................................................................................................GTATTCTGTTTTCG--TTTTCGG.............................................................................................................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................................................................................................................................................................................ATGAACTAAG--AA-GGGAATGGG.......................................................................................................................................................................................................................2111.0010001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGTTGCCTGCCTTTCGG...............................2111.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCCCGCAGTCGTCGCCA.............2111.0010100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT--CC----------AATGGTAT---TTGT--TTA-------............................................................................................2111.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGTAT---TTGT--TTA-------GTTAAT......................................................................................2111.0010100
droYak3
TATT---TTTTGTTCAACATTTT-----------TGTAACTAAAATTTA-----TACCGCATTTAGTGTTT----------CA----AATTATA-C--A---GTTTTATACAAAA------------------------------------TACATAAGCATAC----CTAAAA-A-ATTTCCG-----------T--TTATCCTTAAGT---------GTATTCTGTTTTCG--TTATCGGTT-TGTTTCAG--------------------TGCACG----------------------CCAGA-------------------------------TCGCAGATC-TATGCATGAACTATG--AA-TGGAATGGGGCT-TCC--------------------------------------------------AGTGT----AATTGCTCATATAAAT--CC----------TATGGTAA---TTG---TTA-------GATAATC---------AATTATA------ACCACATATCTCACAGGTTGCCTCCCCTTTGGCGCTCGCAGTCGTCGTCACGCGTGGGAGAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................TATCGGTT-TGTTTCAG--------------------TGCAC.........................................................................................................................................................................................................................................................................................................................2113.00330000000000
.............................................................TTTAGTGTTT----------CA----AATTATA-C--A---GTTTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGTCGTCGTCACGCGT........1911.00100000010000
droEre2
T---------------------T-----------TGTAACTAAAATTTA-----TACCGCATTTAGTGTTT----------CG----AATTATA-TACACA-GTTTTATACAAAA------------------------------------TACATAAGCA-AC----CTACAA-A-ATTTACG-----------T--TTATCCTTAAGT---------GTATTCTGTTTCCG--TTTTCGGTT-TGTTTCAG--------------------TGCACG----------------------TCAGA-------------------------------TCGCAGATT-TATGCATGAACTGTA--AA-GGGAATGGCATTTC-C--------------------------------------------------AGTGT----TGTTGCTCATATA----------------------CAT---TTGTTAATT-------GTTAATC---------AGTTATA------CCAACATATCCCACAGGTTGCCTCCCTTTTGGAGCCCGCAGTCGTCGTCACGCGTGGGAGAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCTCCCTTTTGGAGCCCGCA.......................23110.001000000010
.......................................................................................................................................................................................................................................................TTTCAG--------------------TGCACG----------------------TCAGA-------------------------------TCGC..........................................................................................................................................................................................................................................................2112.0021000010
.....................................................................................................................................................................................................................................TCCG--TTTTCGGTT-TGTTTCAG--------------------..............................................................................................................................................................................................................................................................................................................................2111.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCGCAGTCGTCGTCACGCGTGGG.....2611.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAGCCCGCAGTCGTCGT...............2111.0010000010
.......................................................................................AATTATA-TACACA-GTTTTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..............................................................................................................................................................................................................................................................................................................................................................GCATGAACTGTA--AA-GGGAATGGCA......................................................................................................................................................................................................................2411.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGAGCCCGCAGTCGTCG................2111.0010000010
............................................................................................TA-TACACA-GTTTTATACAAAA------------------------------------TACAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTTGCCTCCCTTTTGGAG.............................2111.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................A--AA-GGGAATGGCATTTG-A--------------------------------------------------..............................................................................................................................................................18200.0510000100

Generated: 05/18/2015 at 12:17 AM