ID:

dwi_957

 Coordinate:

scf2_1100000004514:313775-313925 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-1.5 -1.3 -1.2

Flybase annnotation

exon [dwil_GLEANR_16017:9]; CDS [Dwil\GK15777-cds]; intron [Dwil\GK15777-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GATAATATATCAACTTGCTTTCCAGCACTGCCGCAACACGTGTTTCTCGTTCATTTGTTTTAACCTGGTACCGCGTGCACGTTCGCTTCGCAGTTGGTTAATAAAATATAAATTAATAAAATATGGCTGACGTTGGTAAGCATTAGACTGACTGAAAACATATTGACTTGGCCATTCTACAACCATTGACAACCTTCTTAGAGGTGCGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTAGAC
****************************************************************************........(((.....(((((((.(((...))).))))))).......))).*************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V119
head
 V117
male body		 M020
head
............................................................................GCACGTTCGCTTCGCAGTTGGTT........................................................................................................................................................ 23 0 1 10.00 10 10 0 0 0 0
..........................................................................GTGCACGTTCGCTTCGCAGTTGGTT........................................................................................................................................................ 25 0 1 10.00 10 10 0 0 0 0
..........................................................................GTGCACGTTCGCTTCGCAGTTGGTTA....................................................................................................................................................... 26 0 1 10.00 10 10 0 0 0 0
..........................................................................GTGCACGTTCGCTTCGCAGTTGGT......................................................................................................................................................... 24 0 1 5.00 5 5 0 0 0 0
.............................................................................CACGTTCGCTTCGCAGTTGGTTA....................................................................................................................................................... 23 0 1 4.00 4 2 0 0 2 0
............................................................................GCACGTTCGCTTCGCAGTTGGTTA....................................................................................................................................................... 24 0 1 3.00 3 2 1 0 0 0
......................................................TTGTTTTAACCTGGTACCGC................................................................................................................................................................................. 20 0 1 3.00 3 3 0 0 0 0
..........................................................TTTAACCTGGTACCGCGTGC............................................................................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0
..............................................................................ACGTTCGCTTCGCAGTTGGT......................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0
............................................................................GCACGTTCGCTTCGCAGTTGGT......................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
................................................................................GTTCGCTTCGCAGTTGGT......................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0
........................................................GTTTTAACCTGGTACCGCGTG.............................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0
..........................................................................GTGCACGTTCGCTTCGCAGTTG........................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
..............................................................................................................AATTAATAAAATATGGCT........................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0
................................................................................GTTCGCTTCGCAGTTGGTT........................................................................................................................................................ 19 0 1 2.00 2 2 0 0 0 0
..............................................................................CACTTCGCTTCGCAGTTGGTTAATAA................................................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0
...........................................................................TGCACGTTCGCTTCGCAGTTGGTT........................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
.............................................................AACCTGGTACCGCGTGCACGTT........................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.........................................................................CGTGCACGTTAGCTTCGCA............................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
.....................................................TTTGTTTTAACATGGTACCGC................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
.......................................................................................TCGCAGTTGGTTAATAAAATA............................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
................................................................................GTTCGCTTCGCAGTTGGTTA....................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.................................................................................TTCGCTTCGCAGTTGGTTAATA.................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
........................................................GTTTTAACCTGGTACCGCGTGCAC........................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................................................................TGAGGTGCGCAAGGAGAA.................................. 18 1 1 1.00 1 1 0 0 0 0
..............................................................................ACGTTCGCTTCGCAGTTGGTT........................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................ATTAGACTGACTGAAAACAT.......................................................................................... 20 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................TGCGCAAGGAGAAGAAAAAGA.......................... 21 0 1 1.00 1 1 0 0 0 0
.......................................................TGTTTTAACCTGGTAACGCGT............................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
................................................................CTGGTACCGCGTGCACGTTCGCTTCGC................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................TGGCTGACGTTGGTAAGC.............................................................................................................. 18 0 1 1.00 1 0 0 1 0 0
.................................................................AGGTACCGCGTGCACGTTCGCT.................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0
.........................................................................CGTGCACGTTCGCTTCGCAGTT............................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................GTTGAGGTGCGCAAGGAGAA.................................. 20 2 1 1.00 1 0 0 0 1 0
........................................................................................CGCAGTTGGTTAATAAAATAT.............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
....................................................................TACCGCGTGCACGTTCGCTTCGCAGTTG........................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................................................AGGTGCGCAAGGAGAAGAAA.............................. 20 0 1 1.00 1 1 0 0 0 0
..........................................................................GTTCACGTTCGCTTCGCAGTTGGTTA....................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
....................................................ATTTGTTTTAACCTGGTACCGCGTGCA............................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
......................................................TTTTTTTAACCTGGTACCGC................................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
.............................................................................CACGTTCGCTTCGCAGTTGGTT........................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
..........................................................................GTGCACGTTCGCTTCGCAGTTGG.......................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..........................................................................GTGCACGTTCGATTCGCAGTTGGTTA....................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0
..................................................................................................................................CGTTGGTAAGCATTAGAC....................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
.......................................................TGTTTTAACCTGGTACCGC................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
.............................................................AACCTGGTACCGCGTGCACGTTCGCTT................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...................................................................................CGCTTCGCAGTTGGTTAAT..................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
...................................................................................................................................GTTGGTAAGCATTAGACT...................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
...............................................................................................................ATTAATAAAATATGGCTGACGTTG.................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
........................................................GTTTTAACCTGGTACCCCGTG.............................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
.................................................................................TTCGCTTCGCAGTTGGTTAA...................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................ATGGCTGACGTTGGTAAG............................................................................................................... 18 0 1 1.00 1 0 0 0 0 1
.................................................................................................................................................................................................................................AGAAGATCAAGGAGGAGCCCTTA... 23 0 1 1.00 1 1 0 0 0 0
........................................................................................CGCAGTTGGTTAATAAAAT................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
...................................................CATTTGTTTTAACCTGGTACCGC................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
..................................................................................................................AATAAAATATGGCTGACGTTGGT.................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
............................................................................GCACGTTCGCTTCGCAGTTG........................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...................................................................................CGCTTCGCAGTTGGTTAATAA................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................AAAAGAAGAAGATCAAGGAGGAGC........ 24 0 1 1.00 1 0 0 0 1 0
...............................................................CCTGGTACCGCGTGCACGTT........................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
................................................................CTGGTACCGCGTGCACGTTCGCTTCG................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
........................................................GTTTTAACCTGGTACCGCGT............................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..........................................................................GTGCACGTTCGCTTCGCAGT............................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
..........................................................TTTAACCTGGTACCGCGTG.............................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
....................................................ATTTGTTTTAACCTGGTACCGC................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
.........................................................................................GCAGTTGGTTAATAAAAT................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................AGAAGAAGATCAAGGAGGAGC........ 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................................ATAAAATATGGCTGACGTTGAGG................................................................................................................. 23 3 2 0.50 1 1 0 0 0 0
.....................................................................................................................AAACTATGGCTGATGTTGCTAA................................................................................................................ 22 3 2 0.50 1 0 1 0 0 0
....................................................................................................................................................................................................CGTTGAGGTGCGCAAGGAGA................................... 20 2 2 0.50 1 1 0 0 0 0
.............................................................................CACGTTCGCTTCACTATTGG.......................................................................................................................................................... 20 3 7 0.14 1 0 1 0 0 0
................................................................................GGTCGATTCGCAGTTGGTGA....................................................................................................................................................... 20 3 8 0.13 1 0 1 0 0 0
...................................................................................................................ATAAAAAATGGCGGACGTTC.................................................................................................................... 20 3 9 0.11 1 1 0 0 0 0
.........................................................................................................................................................................................................................GAAAACGAAGGAGATTAAGGA............. 21 3 13 0.08 1 0 0 0 1 0
................................................................................................................................................................................................................................AAGAAGATTGAGGAGGAGC........ 19 2 14 0.07 1 0 0 0 1 0
...............................................................AGTGGTACCGCGGGCACG.......................................................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

CTATTATATAGTTGAACGAAAGGTCGTGACGGCGTTGTGCACAAAGAGCAAGTAAACAAAATTGGACCATGGCGCACGTGCAAGCGAAGCGTCAACCAATTATTTTATATTTAATTATTTTATACCGACTGCAACCATTCGTAATCTGACTGACTTTTGTATAACTGAACCGGTAAGATGTTGGTAACTGTTGGAAGAATCTCCACGCGTTCCTCTTCTTTTTCTTCTTCTAGTTCCTCCTCGGGAATCTG
***************************************************************************************************************************........(((.....(((((((.(((...))).))))))).......))).**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
..............AACGAGAGGTCTTGACGGC.......................................................................................................................................................................................................................... 19 2 1 1.00 1 1 0
.................GAAAGGTCGTGTGGGCGTT....................................................................................................................................................................................................................... 19 2 1 1.00 1 1 0
.........................................................................GCACGTGCAAGCCTAGCG................................................................................................................................................................ 18 2 1 1.00 1 0 1
................CGAAAGGTCGTGGAGGCGTG....................................................................................................................................................................................................................... 20 3 3 0.33 1 1 0
..........................................................................................................................................................................................ACTGTCGGACGAACCTCCAC............................................. 20 3 6 0.17 1 1 0
..................................TTGTGAACAGTGAGCAAGTA..................................................................................................................................................................................................... 20 3 12 0.08 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004514:313725-313975 - dwi_957 GATA---ATATATCAACTTGCTTTCCAG----------C-------A-CTGCCGCAACACGTG--TTTC-----TCGTTCATTTGTTTTAACCTGGTACCGCGTGCACGTTCGCT---TC-G-----CAGT---T-GGTTAAT---AAAATATAAATTAATAA-AATATGGCTGACGTTGGTAAGCATT--AGACTGACTGAA---AACATA--TT-GACTTGGCCATTCT-AC--AACCATTGACA----------ACCTTCTTAGAGGTGCGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTAGAC------
droVir3 scaffold_12875:7135179-7135443 + GGTTATAATATATGAACTAGTTCCGATGTGAATTACTCA-------A-CTCTTGCAACACGTGTGTTAC-----TCGGCCATTTTCCATAACCTGGCACCGCGTGCGAACGTCTTTGAGC-ATC-GCGGGCAGTG-TG--TGTTAAA-----TAAAATTATTT-AAAATGACTGACGTTGGTAAGTGGTT-ATAAAAA-TAAC-A-TAAACAAAG-TACC-TC-C--AATG-GAATAC----GTCATA--------CGTAATTACAGATTCGCGT------AAGAAAAAGAAGAAAATCAAGGAAGAGCCACTCGAT------
droMoj3 scaffold_6496:25849093-25849308 + ----------------------------------------------------C--AACACGTGCGTTGC-----TCGGCCATTTTCCTTAACCTGCCGCCACGTGCGGACGTATTCTTGC-ATC-GCACGTAT-T-GTATCAGAAGT------ATAATTAATT-AAAATGACTGACGTTGGTAAGTGACCATAAATAA-AAAACACCAATTA--A-AGTG-CT-C--AA---AT--AT----GTAATA--------CGTAATTTCAGATTCTCGCAAA------AAAAAGAAGAAAATCAAGGAAGAGCCACAAGAT------
droGri2 scaffold_15245:678825-679095 + GATATAATTATGTGAACTAGTTCCGCAGAAAAATACTCG-------A-ATCTTGCAACACGTGTGTTCC-----TCGGCCATTTTCCTTAACCTGGCACCGCGTGCAAACGTCTTTCGGACATC-GCTTGTGCTTAAGTGTTAAATA------AAATCCAAATAAAGATGACTGACGTTGGTAAGTGTAA-CCAACGCATAAC-A-CAAACAAAG-CGCG-CC-A--AATGCGA--AT----AAAGCA------CAAATCATTGCAGACTCGCG------AAAGAAAAAAAAGAAAATCAAGGAGGAGCCGCTCGAT------
dp5 3:18603482-18603692 - -----------------------------------------------------GCAACACGTG--TTTTTTGGATCGTCCATTTTCTTCGACCAGGCACCGCGTGCACAAGCGTTT---------T--------------------AAAATTT--TTATAAAT-AAAATGGCTGATGGTGGTGAGTAGC--AAAGTGA-TGAC---TAAACC--TA-GTGCTA-G--GATT-AC--AA----GAAGCATCGGTGCGAATCGTTGCAGATGTACGCAAAGAGAAGCGAAAGAAGAAGGTCAAGGAGGAGCCAGTGGAT------
droPer2 scaffold_34:551380-551590 - -----------------------------------------------------GCAACACGTG--TTTTTTGGATCGTCCATTTTCTTCGACCAGGCACCGCGTGCACAAGCGTTT---------T--------------------AAAATTT--TTATAAAT-AAAATGGCTGATGGTGGTGAGTAGC--AAAGTGA-TGAC---TAAACC--TA-GTGCTA-G--GATT-AC--AA----GAAGCATCGCTGCGAATCGTTGCAGATGTACGCAAAGAGAAGCGAAAGAAGAAGGTCAAGGAGGAGCCAGTGGAT------
droAna3 scaffold_13266:14336295-14336508 - ---------------------------------------------------------CACGTG--CTTT-----CCGTCTTTTTTCTGGCAGCGCGCAACACGTGTGGAGGTTGCTCTC--A--CAGAAGT---TAAACGTTGCAGA-----CAAATTGAAATAAAAATGGCCGACGTGGGTAAGTCCA--TGGATGA-TGAA---TAAACC--GT-GACCTG-C--CATT-AC--AA----GGAGCA--------TCTATTCTCAGAGGTACGCAAGGAAAAGAAGAAGAAGAAGATCAAGGAGGAGCCAGTGGAT------
droBip1 scf7180000396759:1795762-1795975 + ---------------------------------------------------------CACGTG--CTTT-----CCGTCTTTTTTCTTGCAGCGCGCAACACGTGTGGAGGTTGCTCTC--A--CAGTAGT---TAAACGTTGCAGA-----CAAATTGAAATAAAAATGGCCGACGTGGGTAAGTTCA--TGGATGA-TGAA---TAAACC--GT-GACATG-C--CATT-AC--AA----GGAGAA--------TCTATTCCCAGAGGTACGCAAGGAAAAGAAGAAGAAGAAGATCAAGGAGGAGCCGGTGGAT------
droKik1 scf7180000302277:1147598-1147725 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGGCCGACGTTGGTAAGTGGCTGGGACTGA-TGAA---TGAACA--TGGGGC-TG-C--AACT-AC--AA----GGACTC--------TCTTCCCGCAGAGGTGCGCAAGGAGAAGAAGAAGAAGAAGATCAAGGAGGAGCCCGTGGAC------
droFic1 scf7180000453858:1793108-1793333 + A-----------------------------------------------CTCGCGCTCCACGTG--TTGTC----TCGTCCATTTTTTCGTCGCACGCAACACGTGCAGAGGTTCTT--TC-ATTTACTTGGAG---TTTTTCTCAGA-----CAAACGCATAT-AAAATGGCCGACGTGGGTAAGTCGAG-AAAGTCA-TGAA---TGAAAA--TGGGAC-TC-C--AACT-AA--AG----GAATTA--------AACACCCGTAGAAGTGCGTAAGGAAAAGAAAAAGAAGAAGATCAAGGAGGAACCCATGGAC------
droEle1 scf7180000491214:5000563-5000805 - GCTA---ACATATCGA---------------------------TAGACCGCGCGCTCCACGTG--TTTTC----TCTTCCATTTTTCCCCAGCAAGCAACACGTGCGCAGGCTT-GCTCC-GTCTATCAGC---A-GATTTCCCAGA-----CAAACGCAGAT-ATAATGGCCGACGTGGGTAAGTTCGA-AGTGTGA-TGAA---TAAAAA--GCGGAC-TG-C--AACT-GT--AC----GGATTA--------TCTGCCCGCAGAGGTACGCAAGGAGAAGAAAAAGAAGAAGGTCAAAGAGGAGCCCGTGGAC------
droRho1 scf7180000777386:104197-104416 + ----------------------------------------------------CGCTCCACGTG--TTTTC----CCGTCCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTCCT--CC-GTGTATCAGT---A-GTTTTCCGAGA-----CAAACGCAGAT-AAAATGGCCGACGTGGGTAAGTTCAA-AAAGAGA-TGAA---TAAAAA--GCAGAC-AG-C--AACT-GT--AC----GGATTA--------TTTGCCTGCAGAGGTACGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCTGTGGAC------
droBia1 scf7180000302143:606630-606849 + ----------------------------------------------------CGCTCCACGTG--TTTGC----CCGTCCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTCCTCTCC-GTTTATTAGT---A-ATTTTCTCAGA-----CAAACGCAGTT-AAAATGGCCGACGTGGGTAAGTCTGA-AAAGTGA-TGAA---TAAAAG----GGAC-TC-C--AACC-TT--AC----GGACTG--------TCTGCCCGCAGAAGCACGCAAG------AAGAAGAAGAAGATCAAGGAGGAGCCCGTGGACAGCGAT
droTak1 scf7180000415666:125997-126224 + ----------------------------------------------------CGCTCCACGTG--TTTTC----CCGTCCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTCCTCTCC-GCTTTCAAAT---A-GTTTTCCCAGA-----CAAACGCAGAT-AAAATGGCCGACGTGGGTAAGTCGGA-AAAGTGA-TGAA---TAAAGT--G-GGAC-TC-C-AAAAT-AA--AA----TGACTA--------TCTGCCCGCAGAAGTGCGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCGGTGGACAGCGAT
droEug1 scf7180000409464:431158-431388 + GATA-----------------------------------------GACTGCGCGCTCCACGTG--TTTTC----TCGTTCATTTTGTCGTTGCGCGCAACACGTGCGGAGGTTCCT--CC-GTCTATTAGT---A-GTTCTCTCAGA-----CAAAAGCAGAT-AAAATGGCAGACGTTGGTAAGTCAAA-AAAGTGA-TGAA---TAAAAA--CGCGAC-GC-C--AACA-AA--AT----AAAATG--------TCTACCTACAGAAGTCCGCAAGGAAAAGAAAAAGAAGAAGATCAAGGAGGAGCCCCTGGAC------
dm3 chr2R:20062387-20062600 + ---------------------------------------------------------CACGTG--TTTT-----TCGTCCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTTCTCTCC-GTCTATTAGT---T-GATTTAGCAGA------AAACGTAGAT-AAAATGGCCGACGTGGGTAAGTCTGG-CAAGTGA-TGAA---TTAAAA--G-AGTG-CC-C--AAAT-AA--AC----GGACTA--------TGCGCCCGCAGAAGTACGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTGGAC------
droSim2 2r:20555126-20555339 + ---------------------------------------------------------CACGTG--TTTT-----TCGTTCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTTCTCTCC-GTCTATCAGT---T-GATTTAGCAGA------AAACGTAGAT-AAAATGGCCGACGTGGGTAAGTCTGG-CAAGTGA-TGAA---TTAAAG--G-AGTG-CC-C--AATT-AA--AC----GGACTA--------TGCGCCAACAGAAGTACGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTGGAC------
droSec2 scaffold_5:309507-309777 + GATGTCTTCATGCAATGCAGCTCTGGGTAGTCACACTTATCGATAGGCCGCGCACTCCACGTG--TTTT-----TCGTTCATTTTCTCGCAGCGCGCAACACGTGCAGAGGTTTCTCTCC-GTCTATCAGT---T-GATTTAGCAGA------AAACGTAGAT-AAAATGGCCGACGTGGGTAAGTCTGG-CAAGTGA-TGAA---TTAAAG--G-AGTG-CC-C--AATT-AA--AC----GGACTA--------TGCGCCAACAGAAGTACGCAAAGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTGGAC------
droYak3 2R:20033957-20034175 + ----------------------------------------------------CGCTCCACGTG--TTTT-----TCGTTCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTTCTCTCC-GTCTATTAGT---G-GATTTAGCAGA------AAACGTAGAT-AAAATGGCCGACGTGGGTAAGTCTCG-AAAGTGA-TAAA---TTAAAA--G-AGGC-CC-C--AATT-AA--AC----GGATAA--------TACGCCCACAGAAGTACGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTGGAC------
droEre2 scaffold_4845:21432418-21432636 + ----------------------------------------------------CGCTCCACGTG--TTTT-----TCTTCCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTTCTCTCC-GTCTATTAGT---T-GATTTAGCAGA------AAACGTAGAT-AAGATGGCCGACGTGGGTAAGTCTCA-CATGTGA-TGAA---TTAAAG--G-AGTG-CC-C--AATT-AA--AC----GGACTA--------TGCGCCCACAGAAGTACGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTGGAC------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GATA---ATATATCAACTTGCTTTCCAG----------C-------A-CTGCCGCAACACGTG--TTTC-----TCGTTCATTTGTTTTAACCTGGTACCGCGTGCACGTTCGCT---TC-G-----CAGT---T-GGTTAAT---AAAATATAAATTAATAA-AATATGGCTGACGTTGGTAAGCATT--AGACTGACTGAA---AACATA--TT-GACTTGGCCATTCT-AC--AACCATTGACA----------ACCTTCTTAGAGGTGCGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTAGAC------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................GCACGTTCGCT---TC-G-----CAGT---T-GGTT.......................................................................................................................................................................................23110.0010000100
......................................................................................................GTGCACGTTCGCT---TC-G-----CAGT---T-GGTT.......................................................................................................................................................................................25110.0010000100
......................................................................................................GTGCACGTTCGCT---TC-G-----CAGT---T-GGTTA......................................................................................................................................................................................26110.0010000100
......................................................................................................GTGCACGTTCGCT---TC-G-----CAGT---T-GGT........................................................................................................................................................................................2415.00500050
.........................................................................................................CACGTTCGCT---TC-G-----CAGT---T-GGTTA......................................................................................................................................................................................2314.00400220
........................................................................................................GCACGTTCGCT---TC-G-----CAGT---T-GGTTA......................................................................................................................................................................................2413.00301020
..................................................................................TTGTTTTAACCTGGTACCGC.............................................................................................................................................................................................................................2013.00300030
......................................................................................TTTAACCTGGTACCGCGTGC.........................................................................................................................................................................................................................2012.00200020
..........................................................................................................ACGTTCGCT---TC-G-----CAGT---T-GGT........................................................................................................................................................................................2012.00200020
........................................................................................................GCACGTTCGCT---TC-G-----CAGT---T-GGT........................................................................................................................................................................................2212.00200020
............................................................................................................GTTCGCT---TC-G-----CAGT---T-GGT........................................................................................................................................................................................1812.00200020
....................................................................................GTTTTAACCTGGTACCGCGTG..........................................................................................................................................................................................................................2112.00200020
......................................................................................................GTGCACGTTCGCT---TC-G-----CAGT---T-G..........................................................................................................................................................................................2212.00200020
..........................................................................................................................................................AATTAATAA-AATATGGCT......................................................................................................................................................1812.00200020
............................................................................................................GTTCGCT---TC-G-----CAGT---T-GGTT.......................................................................................................................................................................................1912.00200020
.......................................................................................................TGCACGTTCGCT---TC-G-----CAGT---T-GGTT.......................................................................................................................................................................................2411.00100010
.........................................................................................AACCTGGTACCGCGTGCACGTT....................................................................................................................................................................................................................2211.00100010
......................................................................................................................TC-G-----CAGT---T-GGTTAAT---AAAATA...........................................................................................................................................................................2111.00100001
............................................................................................................GTTCGCT---TC-G-----CAGT---T-GGTTA......................................................................................................................................................................................2011.00100010
.............................................................................................................TTCGCT---TC-G-----CAGT---T-GGTTAAT---A................................................................................................................................................................................2211.00100010
....................................................................................GTTTTAACCTGGTACCGCGTGCAC.......................................................................................................................................................................................................................2411.00101000
..........................................................................................................ACGTTCGCT---TC-G-----CAGT---T-GGTT.......................................................................................................................................................................................2111.00100010
..........................................................................................................................................................................................ATT--AGACTGACTGAA---AACAT................................................................................................................2011.00100010
..............................................................................................................................................................................................................................................................................TGCGCAAGGAGAAGAAAAAGA................................2111.00100010
............................................................................................CTGGTACCGCGTGCACGTTCGCT---TC-G-----C...................................................................................................................................................................................................2711.00100010
........................................................................................................................................................................TGGCTGACGTTGGTAAGC.........................................................................................................................................1811.00100001
.....................................................................................................CGTGCACGTTCGCT---TC-G-----CAGT---T-...........................................................................................................................................................................................2211.00101000
.......................................................................................................................C-G-----CAGT---T-GGTTAAT---AAAATAT..........................................................................................................................................................................2111.00100010
................................................................................................TACCGCGTGCACGTTCGCT---TC-G-----CAGT---T-G..........................................................................................................................................................................................2811.00101000
...........................................................................................................................................................................................................................................................................AGGTGCGCAAGGAGAAGAAA....................................2011.00100010
................................................................................ATTTGTTTTAACCTGGTACCGCGTGCA........................................................................................................................................................................................................................2711.00100010
.........................................................................................................CACGTTCGCT---TC-G-----CAGT---T-GGTT.......................................................................................................................................................................................2211.00100010
......................................................................................................GTGCACGTTCGCT---TC-G-----CAGT---T-GG.........................................................................................................................................................................................2311.00100010
...............................................................................................................................................................................CGTTGGTAAGCATT--AGAC................................................................................................................................1811.00100010
...................................................................................TGTTTTAACCTGGTACCGC.............................................................................................................................................................................................................................1911.00100010
.........................................................................................AACCTGGTACCGCGTGCACGTTCGCT---T............................................................................................................................................................................................................2711.00100010
...............................................................................................................CGCT---TC-G-----CAGT---T-GGTTAAT---.................................................................................................................................................................................1911.00100001
................................................................................................................................................................................GTTGGTAAGCATT--AGACT...............................................................................................................................1811.00100010
...........................................................................................................................................................ATTAATAA-AATATGGCTGACGTTG...............................................................................................................................................2411.00100010
.............................................................................................................TTCGCT---TC-G-----CAGT---T-GGTTAA.....................................................................................................................................................................................2011.00100001
.......................................................................................................................................................................ATGGCTGACGTTGGTAAG..........................................................................................................................................1811.00110000
...................................................................................................................................................................................................................................................................................................AGAAGATCAAGGAGGAGCCCTTA.........2311.00100010
.......................................................................................................................C-G-----CAGT---T-GGTTAAT---AAAAT............................................................................................................................................................................1911.00100010
...............................................................................CATTTGTTTTAACCTGGTACCGC.............................................................................................................................................................................................................................2311.00100010
..............................................................................................................................................................AATAA-AATATGGCTGACGTTGGT.............................................................................................................................................2311.00100010
........................................................................................................GCACGTTCGCT---TC-G-----CAGT---T-G..........................................................................................................................................................................................2011.00100010
...............................................................................................................CGCT---TC-G-----CAGT---T-GGTTAAT---AA...............................................................................................................................................................................2111.00100010
.............................................................................................................................................................................................................................................................................................AAAAGAAGAAGATCAAGGAGGAGC..............2411.00100100
...........................................................................................CCTGGTACCGCGTGCACGTT....................................................................................................................................................................................................................2011.00100010
............................................................................................CTGGTACCGCGTGCACGTTCGCT---TC-G-----....................................................................................................................................................................................................2611.00100010
....................................................................................GTTTTAACCTGGTACCGCGT...........................................................................................................................................................................................................................2011.00100010
......................................................................................................GTGCACGTTCGCT---TC-G-----CAGT---.............................................................................................................................................................................................2011.00100010
......................................................................................TTTAACCTGGTACCGCGTG..........................................................................................................................................................................................................................1911.00100010
................................................................................ATTTGTTTTAACCTGGTACCGC.............................................................................................................................................................................................................................2211.00100010
.........................................................................................................................G-----CAGT---T-GGTTAAT---AAAAT............................................................................................................................................................................1811.00100010
................................................................................................................................................................................................................................................................................................AGAAGAAGATCAAGGAGGAGC..............2111.00100010
...............................................................................................................................................................ATAA-AATATGGCTGACGTTGAGG............................................................................................................................................2320.50100010
droVir3
GGTTATAATATATGAACTAGTTCCGATGTGAATTACTCA-------A-CTCTTGCAACACGTGTGTTAC-----TCGGCCATTTTCCATAACCTGGCACCGCGTGCGAACGTCTTTGAGC-ATC-GCGGGCAGTG-TG--TGTTAAA-----TAAAATTATTT-AAAATGACTGACGTTGGTAAGTGGTT-ATAAAAA-TAAC-A-TAAACAAAG-TACC-TC-C--AATG-GAATAC----GTCATA--------CGTAATTACAGATTCGCGT------AAGAAAAAGAAGAAAATCAAGGAAGAGCCACTCGAT------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................GTGCGAACGTCTTTGAGC-..........................................................................................................................................................................................................1818.008001100000000030000000000000000100000000000000000000000000002000
..............................................................................................................GTCTTTGAGC-ATC-GCGGG.................................................................................................................................................................................................1814.004120000000000000000000000000000000000000000000000000000000100000
.......................................................................................ATAACCTGGCACCGCGTGCGAAC.....................................................................................................................................................................................................................2312.002000200000000000000000000000000000000000000000000000000000000000
........................................................................................................GCGAACGTCTTTGAGC-ATC-GC....................................................................................................................................................................................................2112.002000000000000000000000000000000000020000000000000000000000000000
......................................................................................................GTGCGAACGTCTTTGAGC-ATC-GCG...................................................................................................................................................................................................2412.002000000000000000000000000000000000000110000000000000000000000000
.................................................................................................................................................................................................................................................................................................GAAGAAAATCAAGGAAGAGC..............2012.002000200000000000000000000000000000000000000000000000000000000000
..........................................................................................................GAACGTCTTTGAGC-ATC-GCGGG.................................................................................................................................................................................................2212.002000100000000000001000000000000000000000000000000000000000000000
.........................................................................................AACCTGGCACCGCGTGCGAACGTCTT................................................................................................................................................................................................................2611.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................GAGC-ATC-GCGGGCAGTG-TG--TGT....................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................TTTCCATAACCTGGCACCGCGTGCGAAC.....................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGCGTGCGAACGTCTTTGAGC-ATC-GCGGG.................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................GCGAACGTCTTTGAGC-ATC-GCG...................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................AAACAAAG-TACC-TC-C--AATG-GA.........................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................C-GCGGGCAGTG-TG--TGTTA..................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AACGTCTTTGAGC-ATC-GCGGGC................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................CCATAACCTGGCACCGCGTGC.........................................................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
..............................................................................................GGCACCGCGTGCGAACGTCTTTGAGC-AT........................................................................................................................................................................................................2811.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................GCGAACGTCTTTGAGC-ATC-GCGG..................................................................................................................................................................................................2311.001000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GT------AAGAAAAAGAAGAAAATCAAGG....................2411.001000000000000000000000000000000000010000000000000000000000000000
..............................................A-CTCTTGCAACACGTGTGA.................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................CATTTTCCATAACCTGGCACCGCG............................................................................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................AAAAGAAGAAAATCAAGGAAGAGCCACTC.........2911.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................AACGTCTTTGAGC-ATC-GC....................................................................................................................................................................................................1811.001000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................C-ATC-GCGGGCAGTG-TG--TGTTAA.................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATC-GCGGGCAGTG-TG--TGTTAA.................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGAAGAAAATCAAGGAAGAGC..............2111.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AAAAGAAGAAAATCAAGGAAGAG...............2311.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................AGTG-TG--TGTTAAA-----TAAAATTATTT-A..............................................................................................................................................................2511.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................ATC-GCGGGCAGTG-TG--TGTTA..................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AGC-ATC-GCGGGCAGTG-TG--.......................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................AAAATTATTT-AAAATGACT......................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................CCTGGCACCGCGTGCGAACG....................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................AGAAAATCAAGGAAGAGC..............1811.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................AATG-GAATAC----GTCATA--------CGTAATTA...........................................................2411.001000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................GAACGTCTTTGAGC-ATC-GCGGGC................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................GCACCGCGTGCGAACGTCTTTGAGC-ATC-G.....................................................................................................................................................................................................2911.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................GGCACCGCGTGCGAACGTCTTTGAGC-..........................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AACGTCTTTGAGC-ATC-GCGGG.................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TTATTT-AAAATGACTGACGTT................................................................................................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................AAGAAAAAGAAGAAAATCAAGGA...................2311.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................CATTTTCCATAACCTGGCACCG..............................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000001000000000000
...................................................................................TTCCATAACCTGGCACCGCGT...........................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................GTCTTTGAGC-ATC-GCGGGCAGTG-TG--.......................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................GAACGTCTTTGAGC-ATC-GC....................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................GTCTTTGAGC-ATC-GCGGGCAG..............................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
----------------------------------------------------C--AACACGTGCGTTGC-----TCGGCCATTTTCCTTAACCTGCCGCCACGTGCGGACGTATTCTTGC-ATC-GCACGTAT-T-GTATCAGAAGT------ATAATTAATT-AAAATGACTGACGTTGGTAAGTGACCATAAATAA-AAAACACCAATTA--A-AGTG-CT-C--AA---AT--AT----GTAATA--------CGTAATTTCAGATTCTCGCAAA------AAAAAGAAGAAAATCAAGGAAGAGCCACAAGAT------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................TTTCCTTAACCTGCCGCCACGTGCGGAC.....................................................................................................................................................................................................................2811.001000010
.................................................................................................GCCACGTGCGGACGTATTCTT.............................................................................................................................................................................................................2111.001100000
............................................................................................................................................................ATTAATT-AAAATGACTGACGTTG...............................................................................................................................................2311.001100000
..........................................................................................ACCTGCCGCCACGTGCGGAC.....................................................................................................................................................................................................................2011.001000010
...............................................................................................CCGCCACGTGCGGACGTATTCTTGC-ATC-G.....................................................................................................................................................................................................2911.001100000
.........................................................................................AACCTGCCGCCACGTGCGGACG....................................................................................................................................................................................................................2211.001100000
.................................................................................................GCCACGTGCGGACGTATTCTTGC-..........................................................................................................................................................................................................2311.001000010
...........................................................................................CCTGCCGCCACGTGCGGACG....................................................................................................................................................................................................................2011.001100000
..........................................................................................ACCTGCCGCCACGTGCGGACGTA..................................................................................................................................................................................................................2311.001100000
.............................................................................................................................GCACGTAT-T-GTATCAGAAG.................................................................................................................................................................................1911.001000010
droGri2
GATATAATTATGTGAACTAGTTCCGCAGAAAAATACTCG-------A-ATCTTGCAACACGTGTGTTCC-----TCGGCCATTTTCCTTAACCTGGCACCGCGTGCAAACGTCTTTCGGACATC-GCTTGTGCTTAAGTGTTAAATA------AAATCCAAATAAAGATGACTGACGTTGGTAAGTGTAA-CCAACGCATAAC-A-CAAACAAAG-CGCG-CC-A--AATGCGA--AT----AAAGCA------CAAATCATTGCAGACTCGCG------AAAGAAAAAAAAGAAAATCAAGGAGGAGCCGCTCGAT------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................CTTTCGGACATC-GCTTGTG...............................................................................................................................................................................................1911.00110
dp5
-----------------------------------------------------GCAACACGTG--TTTTTTGGATCGTCCATTTTCTTCGACCAGGCACCGCGTGCACAAGCGTTT---------T--------------------AAAATTT--TTATAAAT-AAAATGGCTGATGGTGGTGAGTAGC--AAAGTGA-TGAC---TAAACC--TA-GTGCTA-G--GATT-AC--AA----GAAGCATCGGTGCGAATCGTTGCAGATGTACGCAAAGAGAAGCGAAAGAAGAAGGTCAAGGAGGAGCCAGTGGAT------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................TTCTTCGACCAGGCACCGCGTGCA........................................................................................................................................................................................................................2412.0020200000000
.........................................................................................................................................................................................................................................................CGGTGCGAATCGTTGCAG........................................................1811.0010100000000
..............................................................................................................................................................................................................................................................................TACGCAAAGAGAAGCGAAAGAAGAAGG..........................2711.0010100000000
.............................................................................................................................................................................................................................TA-G--GATT-AC--AA----GAAGCATCGGTGCG...................................................................2511.0010100000000
...........................................................................................CCAGGCACCGCGTGCACAAGC...................................................................................................................................................................................................................2111.0010010000000
....................................................................................TCTTCGACCAGGCACCGCGTGCACAAGC...................................................................................................................................................................................................................2811.0010010000000
........................................................................................................................................................................................GTAGC--AAAGTGA-TGAC---TAAACC--TA-GT........................................................................................................2611.0010100000000
...................................................................................TTCTTCGACCAGGCACCGCGTGC.........................................................................................................................................................................................................................2311.0010100000000
........................................................................................CGACCAGGCACCGCGTGCACAAGC...................................................................................................................................................................................................................2411.0010000100000
......................................................................................TTCGACCAGGCACCGCGTG..........................................................................................................................................................................................................................1911.0010000100000
...........................................................................CGTCCATTTTCTTCGACCAGGC..................................................................................................................................................................................................................................2211.0010010000000
...........................................................................................................................................................TTATAAAT-AAAATGGCTGATGGTGA..............................................................................................................................................2511.0010100000000
.....................................................................................CTTCGACCAGGCACCGCGTGCACAAGC...................................................................................................................................................................................................................2711.0010010000000
..............................................................................................................................................................TAAAT-AAAATGGCTGATGGTGGTGAGT.........................................................................................................................................2711.0010001000000
droPer2
-----------------------------------------------------GCAACACGTG--TTTTTTGGATCGTCCATTTTCTTCGACCAGGCACCGCGTGCACAAGCGTTT---------T--------------------AAAATTT--TTATAAAT-AAAATGGCTGATGGTGGTGAGTAGC--AAAGTGA-TGAC---TAAACC--TA-GTGCTA-G--GATT-AC--AA----GAAGCATCGCTGCGAATCGTTGCAGATGTACGCAAAGAGAAGCGAAAGAAGAAGGTCAAGGAGGAGCCAGTGGAT------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................GAAGCGAAAGAAGAAGGTCAAGGA...................2414.004400000
.............................................................................................................................................................................................................................................................................................GAAAGAAGAAGGTCAAGGAGGAGC..............2413.003300000
.............................................................................................................................................................................................................................................................................................GAAAGAAGAAGGTCAAGGAGGAGCC.............2512.002200000
.................................................................................................................................................................................................................................................................................GCAAAGAGAAGCGAAAGAAGAAG...........................2312.002200000
........................................................................................................................................................................................................................................................................................GAAGCGAAAGAAGAAGGTCAAGGAGGA................2712.002200000
......................................................................................................................................................................................................................................................................................GAGAAGCGAAAGAAGAAGGTCAAG.....................2412.002200000
...................................................................................................................................................................................................................................................................................................AGAAGGTCAAGGAGGAGC..............1821.002200000
........................................................................................................................................................................................................................................................................................GAAGCGAAAGAAGAAGGTCAAGGG...................2411.001100000
..................................................................................................................................................AAAATTT--TTATAAAT-AAAATGGCT......................................................................................................................................................2411.001100000
.........................................................................................GACCAGGCACCGCGTGCACAAGCGT.................................................................................................................................................................................................................2511.001001000
..................................................................................................................................................................................................................................................................................................AAGAAGGTCAAGGAGGAGCCAGTG.........2411.001000001
........................................................................................................................................................................................................................................................................................GAAGCGAAAGAAGAAGGTCAAGGAGGG................2711.001100000
..............................................................G--TTTTTTGGATCGTCCATTTTCTT...........................................................................................................................................................................................................................................2411.001100000
................................................................................................................................................................................................................................................................................................AGAAGAAGGTCAAGGAGGAGCC.............2211.001100000
......................................................................................................GTGCACAAGCGTTT---------T--------------------AAAATTT--........................................................................................................................................................................2211.001001000
..................................................................................................................TT---------T--------------------AAAATTT--TTATAAAT-AAAATGGCT......................................................................................................................................................2711.001100000
droAna3
---------------------------------------------------------CACGTG--CTTT-----CCGTCTTTTTTCTGGCAGCGCGCAACACGTGTGGAGGTTGCTCTC--A--CAGAAGT---TAAACGTTGCAGA-----CAAATTGAAATAAAAATGGCCGACGTGGGTAAGTCCA--TGGATGA-TGAA---TAAACC--GT-GACCTG-C--CATT-AC--AA----GGAGCA--------TCTATTCTCAGAGGTACGCAAGGAAAAGAAGAAGAAGAAGATCAAGGAGGAGCCAGTGGAT------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................CAAGGAGGAGCCAGTGGA.......1812.002020000
...............................................................................TTTTTTCTGGCAGCGCGCAACACGT...........................................................................................................................................................................................................................2511.001010000
.................................................................................................................................................................ATAAAAATGGCCGACGTGGAG.............................................................................................................................................2111.001010000
................................................................................................................................AGT---TAAACGTTGCAGA-----CAAATTGAAA.................................................................................................................................................................2611.001010000
............................................................................................................AGGTTGCTCTC--A--CAGAAGT---.............................................................................................................................................................................................1911.001000001
.........................................................................................................................................................AAATTGAAATAAAAATGGCC......................................................................................................................................................2011.001010000
.....................................................................................CTGGCAGCGCGCAACACGTGTGGA......................................................................................................................................................................................................................2411.001010000
................................................................................TTTTTCTGGCAGCGCGCA.................................................................................................................................................................................................................................1811.001010000
.............................................................................................................GGTTGCTCTC--A--CAGAAGT---TAAACGTTGC...................................................................................................................................................................................2811.001001000
..................................................................................................................................................................................................................CC--GT-GACCTG-C--CATT-AC--AA----GGAGCA--------TCT................................................................2811.001100000
................................................................................................................................AGT---TAAACGTTGCAGA-----CAA........................................................................................................................................................................1911.001010000
...........................................................................................GCGCGCAACACGTGTGGAGG....................................................................................................................................................................................................................2011.001000100
..................................................................................................................CTCTC--A--CAGAAGT---TAAACGTTGCAGA-----...........................................................................................................................................................................2611.001010000
.................................................................................................................................GT---TAAACGTTGCAGA-----CAAATT.....................................................................................................................................................................2111.001010000
.........................................................................................................................A--CAGAAGT---TAAACGTTGCAG.................................................................................................................................................................................2011.001000010
..............................................................................................CGCAACACGTGTGGAGGT...................................................................................................................................................................................................................1811.001000001
.....................................................................................................CGTGTGGAGGTTGCTCTC--A--.......................................................................................................................................................................................................1911.001000001
.......................................................................................................................................................................ATGGCCGACGTGGGTAAGTCC.......................................................................................................................................2111.001100000
......................................................................................TGGCAGCGCGCAACACGTGTGGA......................................................................................................................................................................................................................2311.001100000
...................................................................................TTCTGGCAGCGCGCAACAC.............................................................................................................................................................................................................................1911.001010000
..........................................................................................AGCGCGCAACACGTGTGGAGG....................................................................................................................................................................................................................2111.001000001
...........................................................................................GCGCGCAACACGTGTGGA......................................................................................................................................................................................................................1811.001100000
.............................................................................................GCGCAACACGTGTGGAGGTTG.................................................................................................................................................................................................................2111.001000010
......................................................................................................................C--A--CAGAAGT---TAAACGTTG....................................................................................................................................................................................1811.001100000
.................................................................................TTTTCTGGCAGCGCGCAACACGTG..........................................................................................................................................................................................................................2411.001010000
...............................................................................................................TTGCTCTC--A--CAGAAGT---TAAACGTTGC...................................................................................................................................................................................2611.001000001
droBip1
---------------------------------------------------------CACGTG--CTTT-----CCGTCTTTTTTCTTGCAGCGCGCAACACGTGTGGAGGTTGCTCTC--A--CAGTAGT---TAAACGTTGCAGA-----CAAATTGAAATAAAAATGGCCGACGTGGGTAAGTTCA--TGGATGA-TGAA---TAAACC--GT-GACATG-C--CATT-AC--AA----GGAGAA--------TCTATTCCCAGAGGTACGCAAGGAAAAGAAGAAGAAGAAGATCAAGGAGGAGCCGGTGGAT------SizeHit CountTotal NormTotal
No Reads
droKik1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGGCCGACGTTGGTAAGTGGCTGGGACTGA-TGAA---TGAACA--TGGGGC-TG-C--AACT-AC--AA----GGACTC--------TCTTCCCGCAGAGGTGCGCAAGGAGAAGAAGAAGAAGAAGATCAAGGAGGAGCCCGTGGAC------SizeHit CountTotal NormTotal
No Reads
droFic1
A-----------------------------------------------CTCGCGCTCCACGTG--TTGTC----TCGTCCATTTTTTCGTCGCACGCAACACGTGCAGAGGTTCTT--TC-ATTTACTTGGAG---TTTTTCTCAGA-----CAAACGCATAT-AAAATGGCCGACGTGGGTAAGTCGAG-AAAGTCA-TGAA---TGAAAA--TGGGAC-TC-C--AACT-AA--AG----GAATTA--------AACACCCGTAGAAGTGCGTAAGGAAAAGAAAAAGAAGAAGATCAAGGAGGAACCCATGGAC------SizeHit CountTotal NormTotal
No Reads
droEle1
GCTA---ACATATCGA---------------------------TAGACCGCGCGCTCCACGTG--TTTTC----TCTTCCATTTTTCCCCAGCAAGCAACACGTGCGCAGGCTT-GCTCC-GTCTATCAGC---A-GATTTCCCAGA-----CAAACGCAGAT-ATAATGGCCGACGTGGGTAAGTTCGA-AGTGTGA-TGAA---TAAAAA--GCGGAC-TG-C--AACT-GT--AC----GGATTA--------TCTGCCCGCAGAGGTACGCAAGGAGAAGAAAAAGAAGAAGGTCAAAGAGGAGCCCGTGGAC------SizeHit CountTotal NormTotal
No Reads
droRho1
----------------------------------------------------CGCTCCACGTG--TTTTC----CCGTCCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTCCT--CC-GTGTATCAGT---A-GTTTTCCGAGA-----CAAACGCAGAT-AAAATGGCCGACGTGGGTAAGTTCAA-AAAGAGA-TGAA---TAAAAA--GCAGAC-AG-C--AACT-GT--AC----GGATTA--------TTTGCCTGCAGAGGTACGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCTGTGGAC------SizeHit CountTotal NormTotal
No Reads
droBia1
----------------------------------------------------CGCTCCACGTG--TTTGC----CCGTCCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTCCTCTCC-GTTTATTAGT---A-ATTTTCTCAGA-----CAAACGCAGTT-AAAATGGCCGACGTGGGTAAGTCTGA-AAAGTGA-TGAA---TAAAAG----GGAC-TC-C--AACC-TT--AC----GGACTG--------TCTGCCCGCAGAAGCACGCAAG------AAGAAGAAGAAGATCAAGGAGGAGCCCGTGGACAGCGATSizeHit CountTotal NormTotal
No Reads
droTak1
----------------------------------------------------CGCTCCACGTG--TTTTC----CCGTCCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTCCTCTCC-GCTTTCAAAT---A-GTTTTCCCAGA-----CAAACGCAGAT-AAAATGGCCGACGTGGGTAAGTCGGA-AAAGTGA-TGAA---TAAAGT--G-GGAC-TC-C-AAAAT-AA--AA----TGACTA--------TCTGCCCGCAGAAGTGCGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCGGTGGACAGCGATSizeHit CountTotal NormTotal
No Reads
droEug1
GATA-----------------------------------------GACTGCGCGCTCCACGTG--TTTTC----TCGTTCATTTTGTCGTTGCGCGCAACACGTGCGGAGGTTCCT--CC-GTCTATTAGT---A-GTTCTCTCAGA-----CAAAAGCAGAT-AAAATGGCAGACGTTGGTAAGTCAAA-AAAGTGA-TGAA---TAAAAA--CGCGAC-GC-C--AACA-AA--AT----AAAATG--------TCTACCTACAGAAGTCCGCAAGGAAAAGAAAAAGAAGAAGATCAAGGAGGAGCCCCTGGAC------SizeHit CountTotal NormTotal
No Reads
dm3
---------------------------------------------------------CACGTG--TTTT-----TCGTCCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTTCTCTCC-GTCTATTAGT---T-GATTTAGCAGA------AAACGTAGAT-AAAATGGCCGACGTGGGTAAGTCTGG-CAAGTGA-TGAA---TTAAAA--G-AGTG-CC-C--AAAT-AA--AC----GGACTA--------TGCGCCCGCAGAAGTACGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTGGAC------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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...............................................................................CATTTTCTCGCAGCGCGCAACACGTGC.........................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
....................................................................................................................................................................................................................................................................................AGGAGAAGAAAAAGAAGAAG...........................2021.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GAAGATCAAGGAGGAGCCCTT..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CAGA------AAACGTAGAT-AAAATGG........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................AT-AAAATGGCCGACGTGGGT.............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................A--AC----GGACTA--------TGCGCCCGCA.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................CGCGCAACACGTGCGGAG.....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GAAGAAGATCAAGGAGGAGCCCTTGGAC------2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TCTCGCAGCGCGCAACACGTGCGGA......................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CGCAAGGAGAAGAAAAAGA................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................GA------AAACGTAGAT-AAAATGGCCGAC...................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TGA-TGAA---TTAAAA--G-AGTG-CC-...................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................CACGTG--TTTT-----TCGTCCATTT...............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TTTCTCGCAGCGCGCAACACGTGCGGC......................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AAATGGCCGACGTGGGTAAGTCTG......................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................................................................................................................................GTG-CC-C--AAAT-AA--AC----GGACTA--------TG.................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TCTCC-GTCTATTAGT---T-GATT.......................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GCGCGCAACACGTGCGGAGGTT..................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................GTAGAT-AAAATGGCCGACGT.................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................AT-AAAATGGCCGACGTGGGTAAGT.........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................GTAAGTCTGG-CAAGTGA-TGA.........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................CTCTCC-GTCTATTAGT---T-GAT........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AAAAAGAAGAAGATCAAGGAGG.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................ATGGCCGACGTGGGTAAG..........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................AGA------AAACGTAGAT-AAAATGGCCGA....................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GTGGGTAAGTCTGG-CAAGTG..............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TTAGT---T-GATTTAGCAGA------AAACGT....................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................GCAGCGCGCAACACGTGCGGA......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................AT-AAAATGGCCGACGTGGGTA............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................................................................................................................GAAGAAGATCAAGGAGGAG...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACACGTGCGGAGGTTTCTCT.............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................................................................................................................G-AGTG-CC-C--AAAT-AA--AC----GGACTA--------TGCGC..............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AAATGGCCGACGTGGGTAAGTC........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................................AGAAGTACGCAAGGAGAAGAAAAAG.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................TTTTCTCGCAGCGCGCAACACGTGCGG.......................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AAAAAGAAGAAGATCAAGGAGGAGC..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................GATTTAGCAGA------AAACGTAGA.................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GCGCAACACGTGCGGAGGTTTCTCTCC-G.........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........................................................................................................................................................................GGCCGACGTGGGTAAGTCTG......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................AAGAAGATCAAGGAGGAGCCCTTGG........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................A------AAACGTAGAT-AAAATGGCCGACGTGGC..............................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................GCAGCGCGCAACACGTGCGGAGGT...................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................................................ACGTAGAT-AAAATGGCCGACGTGGAAG............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CGCAACACGTGCGGAGGTTTCT...............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................GCGCGCAACACGTGCGGAG.....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................A------AAACGTAGAT-AAAATGGCC......................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................AGAAGATCAAGGAGGAGCCC............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...............................................................................................................................................................................................................................................................................................AAGAAGAAGATCAAGGAGGAG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........................................................................................................................................................................................................................................................................................GAAAAAGAAGAAGATCAAGGA...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................ATCAAGGAGGAGCCCTTGGAC------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AAATGGCCGACGTGGGTAAGTCTGG-....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................AACGTAGAT-AAAATGGCCGACGTG................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GCCGACGTGGGTAAGTCTG......................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................G-AGTG-CC-C--AAAT-AA--AC----GGACTA--------TGC................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................A--------TGCGCCCGCAGAAGTACGCAAGGAG..........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TTAAAA--G-AGTG-CC-C--AAAT-AA--AC----GGAC.............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AAGAAGAAGATCAAGGAGGAGCC.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GTGA-TGAA---TTAAAA--G-AGTG-CC-C--................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................GTAAGTCTGG-CAAGTGA-TGAA---TTA..................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CTCC-GTCTATTAGT---T-GATTTAGCAGA------..........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................GGTTTCTCTCC-GTCTATTAG.................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CTATTAGT---T-GATTTAGCAG.................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TCC-GTCTATTAGT---T-GATTTAG....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................GTAGAT-AAAATGGCCGACGTGGG..............................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GCGCAACACGTGCGGAGGTT..................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................TTTCTCTCC-GTCTATTAGT---T-GAT........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CGCAGCGCGCAACACGTGC.........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GACTA--------TGCGCCCGCAGAA......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AAAGAAGAAGATCAAGGAGG.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ACGTAGAT-AAAATGGCCGACGTGGC..............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AAGAAGATCAAGGAGGAG...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CACGTGCGGAGGTTTCTCTCC-G.........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CTCGCAGCGCGCAACACGTGCGGAGGT...................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................AC----GGACTA--------TGCGCCCGCAG........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGGCCGACGTGGGTAAGTCTGG-CAAGT...............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................AAAT-AA--AC----GGACTA--------TGCGCCCGCAG........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................CTGG-CAAGTGA-TGAA---TTAAA................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................CAGA------AAACGTAGAT-AAAATGGCCG.....................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................ACGTGCGGAGGTTTCTCTCC-GTC.......................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
......................................................................................TCGCAGCGCGCAACACGTGCGGT......................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................T---T-GATTTAGCAGA------AAACGTAG..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AGTACGCAAGGAGAAGAAAAAGAA...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................CTATTAGT---T-GATTTAGCAGA------AAA.......................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TGAA---TTAAAA--G-AGTG-CC-C--................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GAAGAAGATCAAGGAGGAGCCCTTGGA.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGATCAAGGAGGAGCCCTTGGAA------2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................CGCAGCGCGCAACACGTGCGGAG.....................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAGATCAAGGAGGAGCCCTTGG........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CAGA------AAACGTAGAT-AAAATGGCC......................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GAT-AAAATGGCCGACGTGGA..............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACACGTGCGGAGGTTTCTCTC............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CAGA------AAACGTAGAT-AAAATGGC.......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................AGT---T-GATTTAGCAGA------AAACC.....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................GATTTAGCAGA------AAACGTAGAT-ATC............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TTCTCGCAGCGCGCAACACG............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GTGGGTAAGTCTGG-CAAGTGA-TGAA---.....................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGAAGAAGATCAAGGAGGAGCCCTTGG........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGCCGACGTGGGTAAGTCTGG-CAAGT...............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GACGTGGGTAAGTCTGG-CAAG................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................GCAGCGCGCAACACGTGCGGAGGA...................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................................................................................................................A------AAACGTAGAT-AAAATGGCCGACGTG................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ACGTAGAT-AAAATGGCCGACGTG................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
---------------------------------------------------------CACGTG--TTTT-----TCGTTCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTTCTCTCC-GTCTATCAGT---T-GATTTAGCAGA------AAACGTAGAT-AAAATGGCCGACGTGGGTAAGTCTGG-CAAGTGA-TGAA---TTAAAG--G-AGTG-CC-C--AATT-AA--AC----GGACTA--------TGCGCCAACAGAAGTACGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTGGAC------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................TAGCAGA------AAACGTAGAT-AAAATGGCAA.....................................................................................................................................................2712.00200000000000020000
...........................................................................................................................................................................................................................................................................................GAAAAAGAAGAAGATCAAGGAG..................2212.00200200000000000000
...........................................................................................................................................TTAGCAGA------AAACGTAGAT-AAAATGGC.......................................................................................................................................................2612.00200000000200000000
...................................................................................................................................................................................................................................AATT-AA--AC----GGACTA--------TGCGCC.............................................................2012.00220000000000000000
..............................................................................................................GTTTCTCTCC-GTCTATCAGT---.............................................................................................................................................................................................2011.00100100000000000000
....................................................................................................................CTCC-GTCTATCAGT---T-GATTTAGCAGA------..........................................................................................................................................................................2611.00100000001000000000
..................................................................................................................................................................................................................................................................................................AAGAAGATCAAGGAGGAGCCCTTGGA.......2611.00100000010000000000
.............................................................................................................................................AGCAGA------AAACGTAGAT-AA.............................................................................................................................................................1811.00100000001000000000
...............................................................................CATTTTCTCGCAGCGCGCA.................................................................................................................................................................................................................................1911.00100000000001000000
.............................................................................................................................................................................................................................................................................GTACGCAAGGAGAAGAAAAAGAAGAAG...........................2711.00100010000000000000
..........................................................................................................................................TTTAGCAGA------AAACGTAGAT-AAAATGGCC......................................................................................................................................................2811.00100000001000000000
...............................................................................................................................................CAGA------AAACGTAGAT-AAAATGGC.......................................................................................................................................................2211.00100100000000000000
..........................................................................................................................................................................................................................................................................GAAGTACGCAAGGAGAA........................................1711.00100000000001000000
..............................................................................................................GTTTCTCTCC-GTCTATCAGT---T-G..........................................................................................................................................................................................2211.00100100000000000000
........................................................................................................................................GATTTAGCAGA------AAACGTAGAT-...............................................................................................................................................................2111.00100001000000000000
....................................................................................................................................................................................GTAAGTCTGG-CAAGTGA-T...........................................................................................................................1811.00100000000001000000
........................................................................................................................................................................................................................................................................................GAAGAAAAAGAAGAAGATCAAGGA...................2411.00101000000000000000
.............................................................................................................................................................................................................................................................................................AAAAGAAGAAGATCAAGGAGG.................2111.00100100000000000000
.............................................................................................................GGTTTCTCTCC-GTCTATCAGT---T-...........................................................................................................................................................................................2211.00100010000000000000
.................................................................................................................................................GA------AAACGTAGAT-AAAATGG........................................................................................................................................................1911.00100000000001000000
......................................................................................................................................................................................................................................................TA--------TGCGCCAACAGAAGTACGCAAGGAGA.........................................2811.00100000001000000000
............................................................................................................................................................CGTAGAT-AAAATGGCCGA....................................................................................................................................................1811.00110000000000000000
..............................................................................................................GTTTCTCTCC-GTCTATCAGT---T-...........................................................................................................................................................................................2111.00100010000000000000
................................................................................................................................................................GAT-AAAATGGCCGACGTGGGT.............................................................................................................................................2111.00100000000001000000
.........................................................................................................................................................................................................................................A--AC----GGACTA--------TGCGCCAACA.........................................................1911.00100100000000000000
.....................................................................................................CGTGCGGAGGTTTCTCTC............................................................................................................................................................................................................1811.00110000000000000000
.....................................................................................CTCGCAGCGCGCAACACGTGCGGA......................................................................................................................................................................................................................2411.00100010000000000000
.......................................................................................................................C-GTCTATCAGT---T-GATTTAG....................................................................................................................................................................................1911.00110000000000000000
......................................................................................................................................T-GATTTAGCAGA------AAACGTAGAT-AAAA...........................................................................................................................................................2611.00100000000010000000
...........................................................................................................................................TTAGCAGA------AAACGTAGAT-AAAATGGCC......................................................................................................................................................2711.00101000000000000000
..................................................................................................................................................................................................................................................................................................AAGAAGATCAAGGAGGAGCC.............2011.00100100000000000000
...................................................................................TTCTCGCAGCGCGCAACACGTGCGGA......................................................................................................................................................................................................................2611.00100000001000000000
..................................................................................................................................................A------AAACGTAGAT-AAAATGG........................................................................................................................................................1811.00100000000001000000
.......................................................................................................................................................................................................................................................................................AGAAGAAAAAGAAGA.............................15200.05100000001000000000
droSec2
GATGTCTTCATGCAATGCAGCTCTGGGTAGTCACACTTATCGATAGGCCGCGCACTCCACGTG--TTTT-----TCGTTCATTTTCTCGCAGCGCGCAACACGTGCAGAGGTTTCTCTCC-GTCTATCAGT---T-GATTTAGCAGA------AAACGTAGAT-AAAATGGCCGACGTGGGTAAGTCTGG-CAAGTGA-TGAA---TTAAAG--G-AGTG-CC-C--AATT-AA--AC----GGACTA--------TGCGCCAACAGAAGTACGCAAAGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTGGAC------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................T-GATTTAGCAGA------AAACGTAGA.................................................................................................................................................................2112.0021100
...............................................................................CATTTTCTCGCAGCGCGCAACACG............................................................................................................................................................................................................................2412.0020020
................................................................................................................................................................................................AAGTGA-TGAA---TTAAAG--G-A..........................................................................................................1811.0010001
.................................................................................................................................................................................................................................................................................GCAAAGAGAAGAAAAAGAA...............................1911.0010100
.............................................................................................GCGCAACACGTGCAGAGGT...................................................................................................................................................................................................................1911.0010001
........................................................................................................................................................................................................................................................................................GAAGAAAAAGAAGAAGATCAAGGAGG.................2611.0010010
..................................................................................TTTCTCGCAGCGCGCAACACGTGC.........................................................................................................................................................................................................................2411.0010010
..................................................................................TTTCTCGCAGCGCGCAACACGT...........................................................................................................................................................................................................................2211.0010010
.............................................................................................................................................AGCAGA------AAACGTAGAT-AAA............................................................................................................................................................1911.0010010
.....................................................................................................................TCC-GTCTATCAGT---T-GATTTA.....................................................................................................................................................................................2011.0010001
.............................................................................................................................ATCAGT---T-GATTTAGCAGA------AAACGT....................................................................................................................................................................2411.0010010
...........................................................................................................................................TTAGCAGA------AAACGTAGAT-AAAATGG........................................................................................................................................................2511.0010100
.............................................................................................................................................................................................................................................................................................AAAAGAAGAAGATCAAGGAG..................2011.0010010
.....................................................................................CTCGCAGCGCGCAACACGT...........................................................................................................................................................................................................................1911.0010010
...............................................................................CATTTTCTCGCAGCGCGCAACAC.............................................................................................................................................................................................................................2311.0010010
................................................................................ATTTTCTCGCAGCGCGCAACACG............................................................................................................................................................................................................................2311.0010010
............................................................................................................................................TAGCAGA------AAACGTAGAT-AAAATGGC.......................................................................................................................................................2511.0010100
.................................................................................................................................GT---T-GATTTAGCAGA------AAACGTAGAT-...............................................................................................................................................................2411.0010010
.........................................................................................................................GTCTATCAGT---T-GATTTAGCAGA------..........................................................................................................................................................................2211.0010010
............................................................................................CGCGCAACACGTGCAGAGGTTTCTCTCC-..........................................................................................................................................................................................................2811.0010010
.........................................................................................................................GTCTATCAGT---T-GATTTAGCA..................................................................................................................................................................................2011.0010010
.................................................................................................................................GT---T-GATTTAGCAGA------AAACGTAGAT-AAA............................................................................................................................................................2711.0010010
..............................................................................................CGCAACACGTGCAGAGGTT..................................................................................................................................................................................................................1911.0010100
.......................................................................................CGCAGCGCGCAACACGTGCAGAGG....................................................................................................................................................................................................................2411.0010001
..................................................................................................................................T---T-GATTTAGCAGA------AAACG.....................................................................................................................................................................1811.0010001
...............................................................................................................................................................................................................................................................................................AAGAAGAAGATCAAGGAGGAGC..............2211.0010010
..................................................................................................................................T---T-GATTTAGCAGA------AAACGTAGAT-AAA............................................................................................................................................................2611.0010100
..................................................................................................ACACGTGCAGAGGTTTCT...............................................................................................................................................................................................................1811.0010001
.......................................................................................CGCAGCGCGCAACACGTGCAGAG.....................................................................................................................................................................................................................2311.0010010
...........................................................................................GCGCGCAACACGTGCAGAGG....................................................................................................................................................................................................................2011.0010010
..................................................................................................................................................................................................................................................................................................AAGAAGATCAAGGAGGAGC..............1911.0010010
........................................................................................GCAGCGCGCAACACGTGCAGAGGTTTCT...............................................................................................................................................................................................................2811.0010010
...............................................................................................GCAACACGTGCAGAGGTTTCT...............................................................................................................................................................................................................2111.0011000
..........................................................................................................AGAGGTTTCTCTCC-GTCTATCAGT---.............................................................................................................................................................................................2411.0010010
....................................................................................TCTCGCAGCGCGCAACACGTGCAGA......................................................................................................................................................................................................................2511.0010010
.................................................................................................................TCTCTCC-GTCTATCAGT---T-GATTTAGC...................................................................................................................................................................................2611.0010010
droYak3
----------------------------------------------------CGCTCCACGTG--TTTT-----TCGTTCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTTCTCTCC-GTCTATTAGT---G-GATTTAGCAGA------AAACGTAGAT-AAAATGGCCGACGTGGGTAAGTCTCG-AAAGTGA-TAAA---TTAAAA--G-AGGC-CC-C--AATT-AA--AC----GGATAA--------TACGCCCACAGAAGTACGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTGGAC------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................AAAAGAAGAAGATCAAGGA...................1917.00700000000007
..............................................................................................................................TTAGT---G-GATTTAGCAGA------AAACGTAGAT-...............................................................................................................................................................2712.00202000000000
...................................................................................................................................................................................................................................................................................AAGGAGAAGAAAAAGAAGAAGATCAAGG....................2812.00200000000002
.............................................................................................................................ATTAGT---G-GATTTAGCAGA------AAACGTAGAT-...............................................................................................................................................................2811.00100000010000
...............................................................................................GCAACACGTGCGGAGGTTTCT...............................................................................................................................................................................................................2111.00100001000000
.........................................................................................................................................................AAACGTAGAT-AAAATGGCC......................................................................................................................................................1911.00100100000000
...............................................................................CATTTTCTCGCAGCGCGCAACACG............................................................................................................................................................................................................................2411.00101000000000
............................................................................................................................................................................................................................................................................AGTACGCAAGGAGAAGAAAAAGAA...............................2411.00100000010000
................................................................................................CAACACGTGCGGAGGTTTCT...............................................................................................................................................................................................................2011.00101000000000
................................................................................................................................................................................................................................................................................................AGAAGAAGATCAAGGAGGAGC..............2111.00100100000000
...............................................................................................................................................................................................................................................................................ACGCAAGGAGAAGAAAAAGAAGAAGAT.........................2711.00100100000000
.................................................................................................AACACGTGCGGAGGTTTCTCT.............................................................................................................................................................................................................2111.00101000000000
..............................................................................................................................................GCAGA------AAACGTAGAT-AAAATGGCC......................................................................................................................................................2411.00100100000000
...............................................................................................................................................................................................................................................................................ACGCAAGGAGAAGAAAAAGA................................2011.00100010000000
..............................................................................................................................................................................................................................................................................TACGCAAGGAGAAGAAAAAGAAGAAGA..........................2711.00101000000000
......................................................................................TCGCAGCGCGCAACACGTGCGGAGG....................................................................................................................................................................................................................2511.00100100000000
.................................................................................................................................................................AT-AAAATGGCCGACGTGG...............................................................................................................................................1811.00100000010000
...............................................................................................GCAACACGTGCGGAGGTTTCTCTCC-GTCT......................................................................................................................................................................................................2911.00100100000000
.............................................................................................................................ATTAGT---G-GATTTAGCAGA------AAACGT....................................................................................................................................................................2411.00100010000000
..............................................................................................................................TTAGT---G-GATTTAGCAGA------AAAC......................................................................................................................................................................2111.00100100000000
................................................................................................................................................AGA------AAACGTAGAT-AAAATGGCCGAC...................................................................................................................................................2511.00100100000000
.......................................................................................CGCAGCGCGCAACACGTGCGGAG.....................................................................................................................................................................................................................2311.00100010000000
...........................................................................................................................................................................................................................................................................................GAAAAAGAAGAAGATCAAGGAGG.................2311.00100100000000
.........................................................................................................................................................AAACGTAGAT-AAAATGGCCGACGTGGA..............................................................................................................................................2711.00100010000000
....................................................................................TCTCGCAGCGCGCAACACGTGCGGA......................................................................................................................................................................................................................2511.00101000000000
.............................................................................................................GGTTTCTCTCC-GTCTATTAGT---G-G..........................................................................................................................................................................................2311.00101000000000
...........................................................................................................................................................................................................................................................................................GAAAAAGAAGAAGATCAAGG....................2011.00100100000000
...........................................................................................................................................................................................................................................................................AAGTACGCAAGGAGAAGAAAAA..................................2211.00100000010000
.............................................................................................................................................................GTAGAT-AAAATGGCCGACGT.................................................................................................................................................2011.00100010000000
..................................................................................TTTCTCGCAGCGCGCAACACGTGC.........................................................................................................................................................................................................................2411.00100100000000
....................................................................................................................................................................................................................................................................................................GAAGATCAAGGAGGAGCCCTTGGAC------2511.00100100000000
........................................................................................................................................................................................................................................................................................GAAGAAAAAGAAGAAGATCAAGGA...................2411.00100100000000
.......................................................................................................................C-GTCTATTAGT---G-GATTTAGC...................................................................................................................................................................................2011.00100000010000
............................................................................................................................TATTAGT---G-GATTTAGCAGA------AAACGTAGA.................................................................................................................................................................2811.00100000010000
droEre2
----------------------------------------------------CGCTCCACGTG--TTTT-----TCTTCCATTTTCTCGCAGCGCGCAACACGTGCGGAGGTTTCTCTCC-GTCTATTAGT---T-GATTTAGCAGA------AAACGTAGAT-AAGATGGCCGACGTGGGTAAGTCTCA-CATGTGA-TGAA---TTAAAG--G-AGTG-CC-C--AATT-AA--AC----GGACTA--------TGCGCCCACAGAAGTACGCAAGGAGAAGAAAAAGAAGAAGATCAAGGAGGAGCCCTTGGAC------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................AGATCAAGGAGGAGCCCTTGGAC------23113.001300000013
..........................................................................................AGCGCGCAACACGTGCGGAGGTTTCT...............................................................................................................................................................................................................26111.001100000011
........................................................................................................................................GATTTAGCAGA------AAACGTAGAT-A..............................................................................................................................................................2211.0010000010
.............................................................................................................................................................................................................................................................................................AAAAGAAGAAGATCAAGGAGG.................2111.0010001000
.............................................................................................................................................................................................................................................................................GTACGCAAGGAGAAGAAAAAGA................................2211.0010001000
........................................................................................................................................GATTTAGCAGA------AAACGTAGAT-AAG............................................................................................................................................................2411.0010001000
..........................................................................................................................................................................................................................................................................................AGAAAAAGAAGAAGATCAAGGAGGA................2511.0010000100
..................................................................................................ACACGTGCGGAGGTTTCTCTC............................................................................................................................................................................................................2111.0010100000
......................................................................................................................................T-GATTTAGCAGA------AAACGTA...................................................................................................................................................................1911.0010001000
................................................................................................................................................................................................................................................................................CGCAAGGAGAAGAAAAAGA................................1911.0010001000
............................................................................................................AGGTTTCTCTCC-GTCTATT...................................................................................................................................................................................................1911.0010001000
........................................................................................................................................GATTTAGCAGA------AAACGTA...................................................................................................................................................................1811.0010100000
.............................................................................................................................................................................GACGTGGGTAAGTCTCA-CATG................................................................................................................................2111.0011000000
..................................................................................................ACACGTGCGGAGGTTTCT...............................................................................................................................................................................................................1811.0010000010
..................................................................................................................CTCTCC-GTCTATTAGT---T-GATTTAGCAGA------..........................................................................................................................................................................2811.0011000000
.............................................................................................................................................AGCAGA------AAACGTAGAT-AAGATG.........................................................................................................................................................2211.0010001000
...............................................................................................GCAACACGTGCGGAGGTTTCT...............................................................................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................AAAGAAGAAGATCAAGGAGGAGC..............2311.0010100000
..............................................................................................................GTTTCTCTCC-GTCTATTAGT---C-...........................................................................................................................................................................................2111.0010100000
...........................................................................................................................................TTAGCAGA------AAACGTAGAT-...............................................................................................................................................................1811.0010000010
..............................................................................................................................TTAGT---T-GATTTAGCAGA------AAAC......................................................................................................................................................................2111.0010000010

Generated: 05/18/2015 at 12:15 AM