ID:

dwi_932

 Coordinate:

scf2_1100000004513:5280031-5280181 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.4 -7.1 -6.8 -6.7

Flybase annnotation

exon [dwil_GLEANR_4478:1]; CDS [Dwil\GK21368-cds]; intron [Dwil\GK21368-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron-
mature
  1. scf2_1100000001212:14838-14863 -
  2. scf2_1100000008778:484-509 -
  3. scf2_1100000006263:779-804 -
  4. scf2_1100000004325:2511-2536 -
  5. scf2_1100000004510:845092-845117 -
  6. scf2_1100000004511:476820-476845 -
  7. dwi_932  scf2_1100000004513:5280046-5280071 -
  8. scf2_1100000004515:1744712-1744737 -
  9. scf2_1100000004590:3285366-3285391 -
  10. scf2_1100000004684:81-106 -
  11. scf2_1100000004725:10554-10579 -
  12. scf2_1100000004762:4749707-4749732 -
  13. scf2_1100000004830:30089-30114 -
  14. scf2_1100000004943:7116455-7116480 -
  15. scf2_1100000004909:3295601-3295626 -
  16. scf2_1100000004909:9297048-9297073 -
  17. scf2_1100000004949:1731974-1731999 -
  18. scf2_1100000004954:2341924-2341949 -
  19. scf2_1100000004954:4709171-4709196 -
  20. scf2_1100000004967:3319001-3319026 -
star
  1. scf2_1100000003723:11501-11526 +
  2. dwi_932  scf2_1100000004513:5280084-5280109 -
  3. scf2_1100000004721:265773-265798 -
  4. scf2_1100000004832:277114-277139 +
  5. scf2_1100000004909:1018772-1018797 +
  6. scf2_1100000004909:1765232-1765257 -
  7. scf2_1100000004909:6796610-6796635 -
  8. scf2_1100000004953:876361-876386 -
  9. scf2_1100000004959:344106-344131 +
  10. scf2_1100000004967:3358634-3358659 -
  11. scf2_1100000004968:3030548-3030573 +
  12. scf2_1100000007230:1202-1227 -
  13. scf2_1100000009866:1070-1095 -
  14. scf2_1100000000356:1749-1774 +
  15. scf2_1100000000705:5222-5247 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTCCGTCCGTCTGCCCGTCCGTCTGGATCAACGCAAACTCCTACCAGACCGTAAGAGCTACAGAGCTGAAATTTTGCATGTAGTCTTATATATACCGCAGGGTTATCAAGATCGGGTGATCGGTCATATAGCTCCCATAGGAACGATCGGTCGAAAACAGTGACTTTGATCAATATCTTCGTTATTTCCTATGCTAAGATTGTAGGCCGTTCTTTCGTCTGTCATTAGACTTCTCATATAAAACCTTTTCC
**************************************************************************************************************************.......((.............((((.(((.........)))...)))).............))***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
..............CCGTCCGTCTGGATCAACGCAAACTCC.................................................................................................................................................................................................................. 27 0 20 0.30 6 6 0 0
................................................................................................................................................................TGACTTTGATCAATATCTTCGTTATT................................................................. 26 0 20 0.10 2 2 0 0
............................................CAGACCGTAAGAGCTACAG............................................................................................................................................................................................ 19 0 11 0.09 1 0 0 1
..........................................................................................................................GTCATATAGCTCCCATAGGAACGATC....................................................................................................... 26 0 15 0.07 1 1 0 0
..........................................................TACAGAGCTGAAATTTTGCATGCAGTC...................................................................................................................................................................... 27 1 18 0.06 1 0 1 0
....................GTCTGGATCCACGCAAACTCCTA................................................................................................................................................................................................................ 23 1 20 0.05 1 1 0 0
..................................................................................................................................................................................................TAAGATTGTAGGCCGTTCTTTCGCCTGT............................. 28 1 20 0.05 1 0 1 0
............................................................................................................................................................ACAGTGACTTTGATCAATATCTTCGTT.................................................................... 27 0 20 0.05 1 0 1 0
.......................................................................................................................................................CGAAAACAGTGACTTTGATCAATATCT......................................................................... 27 0 20 0.05 1 1 0 0

Anti-sense strand reads

CAGGCAGGCAGACGGGCAGGCAGACCTAGTTGCGTTTGAGGATGGTCTGGCATTCTCGATGTCTCGACTTTAAAACGTACATCAGAATATATATGGCGTCCCAATAGTTCTAGCCCACTAGCCAGTATATCGAGGGTATCCTTGCTAGCCAGCTTTTGTCACTGAAACTAGTTATAGAAGCAATAAAGGATACGATTCTAACATCCGGCAAGAAAGCAGACAGTAATCTGAAGAGTATATTTTGGAAAAGG
*****************************************************************.......((.............((((.(((.........)))...)))).............))************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
......................................................................................CTATAAATGGCGTCCCAATAT................................................................................................................................................ 21 3 1 1.00 1 1 0 0 0
...................................................................................................................CACTCTCCAGTATATCGAG..................................................................................................................... 19 2 2 0.50 1 1 0 0 0
...............GCAGGCAGACCTAGTTGCGTTT...................................................................................................................................................................................................................... 22 0 20 0.40 8 8 0 0 0
.....................................GAGGATGGGCTGGGAATCTCG................................................................................................................................................................................................. 21 3 6 0.33 2 2 0 0 0
.....................................................TCTCGATGTCTCGACTTTAAAACGT............................................................................................................................................................................. 25 0 20 0.30 6 6 0 0 0
......................................................................................................................................GGTATCCTTGCTAGCCAGCTT................................................................................................ 21 0 20 0.20 4 4 0 0 0
........................................GATGGGCTGGGAATCTCGAT............................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0
.........................................................................................................................................ATCCTTGCTAGCCAGCTTTTGTCACT........................................................................................ 26 0 20 0.15 3 3 0 0 0
...........................................GGTCTGGCATTCTCGATGTCT........................................................................................................................................................................................... 21 0 8 0.13 1 1 0 0 0
......................................................................................................................................................................................ATAAAGGATACGATTCTAACAT............................................... 22 0 20 0.10 2 2 0 0 0
...............................................................................................................................................GCTAGCCAGCTTTTGTCACT........................................................................................ 20 0 20 0.10 2 2 0 0 0
.................................................................................................................................................................CTGAAACTAGTTATAGAAGC...................................................................... 20 0 20 0.10 2 0 0 2 0
.....................................GAGGATGGGCTGGGAATCTC.................................................................................................................................................................................................. 20 3 11 0.09 1 1 0 0 0
........................................GATGGGCTGGGAATCTCGA................................................................................................................................................................................................ 19 3 11 0.09 1 0 0 0 1
....AAGGCAGACGGGCAGGCAGACCTA............................................................................................................................................................................................................................... 24 1 12 0.08 1 0 1 0 0
...........................................GGTCTGGCATTCTCGATGTCCC.......................................................................................................................................................................................... 22 1 18 0.06 1 1 0 0 0
.......................................TGATGGGCTGGGATTCTC.................................................................................................................................................................................................. 18 3 19 0.05 1 1 0 0 0
...............................................................................................................................................................................AGAAGCAATAAAGGATACGATTCTAA.................................................. 26 0 20 0.05 1 0 1 0 0
...............................................................................................................................TATCGAGGGTATCCTTGCTAGCCAGCTT................................................................................................ 28 0 20 0.05 1 0 0 0 1
....................................................................................................................................AGGGTATCCTTGCTAGCCAGCTTTTG............................................................................................. 26 0 20 0.05 1 0 1 0 0
......................................................................................................................................GGTATCCTTGCTAGCCAGCT................................................................................................. 20 0 20 0.05 1 1 0 0 0
................................................GGCATTCTCGATGTCTCGACTTTAAAA................................................................................................................................................................................ 27 0 20 0.05 1 0 1 0 0
........................................................CGATGTCTCGACTTTAAAACGTACA.......................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
..................................................................................................................................................AGCCAGCTTTTGTCACTGAAA.................................................................................... 21 0 20 0.05 1 1 0 0 0
...................................................ATTCTCGATGTCTCGACTTTA................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0
............................................GTCTGGCGTTCTCGATGTCTC.......................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0
.................................................................................................................................................ATGCCAGCTTTTGTCACTGAAACTAGT............................................................................... 27 2 20 0.05 1 1 0 0 0
...........................................................................................................................................................TTGTCACTGAAACTAGTTATAGA......................................................................... 23 0 20 0.05 1 0 0 1 0
.........................................ATGGGCTGGGAATCTCGA................................................................................................................................................................................................ 18 3 20 0.05 1 1 0 0 0
...............................................TGGCATTCTCGATGTCTCGACTTT.................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004513:5279981-5280231 - dwi_932 GTC--CGTCCGTCTGCCCGTCCGTC----TGGATCAACGCAAACTCCTACCAGACCGTAAGAGCTACAGAGCTGAAATTTTGCATGTAGTCTTATATA---T--ACCGCAGG----------G----------------------------------------TTATCAAGATCGGGTGATC-GGTCATATAGCTCC-CATAGGAACGATCGGTCGAAA----A--C-AGTGA------------------------------------------C-----------------------TT---------TGATC--------------------------AATATCTTCGTTATTTCCTATGCTAAGATT--GTAGGC-CGTTC------------------------------TTTC-GTC-TGTCATTAGACT------TCTCA--------TATAAA-ACCTTTTCC------
droVir3 scaffold_10430:334-600 - GTC--TGTCCGTCTATCCGTCTGTC----TGTTTCTATGCGAACTAGTCCATCAGTTTTAAAGCTATCTTAATGAAACTTTGCACGCAG------------------------------------------------------------CACATATGTGAAAACCAGCTGGATCGGACCACTATATCATATAGCTGC-CATAGGAACGATCGCTCGAAA----A-TT-AA-GG------------------------------------------TTTTGTATGAAA---------AACCATTTTGTTTATCAAGATAT-------------CTAGACCAA------------------------------ACTCGGCA--TTTATTAGTTTTACTTTACTCCTCATATATA-----------------TGCAAAA------TCCTA---------TTAAG-ATC-GGACC------
droMoj3 scaffold_6482:467406-467650 - -TC--CGTCCGACCGTCC----GTC----TGTATGAGCAAAAGGCTCTCAGAAGATATAAGAGCTAGAGAGCTGAAATTTGGCATGCATACTCGTGTA---T--ACCATAGGCAGTACG-AGTTTGCTT-------------------------------------------------TATT-TTTCCGATAACTCATCCGATAAATTTTTTATCGAGA----A--T------------------------------------------------------------------AATCGACTTGGTTTTTATACTCATTCACGAAAGTAAATC---------AGTATATTGGTTTTGTGCAATGTCCGTCTT--GCTGTC-CGTC---------------------------------------------------C------GTCT----------GT--------CCGTC------
droGri2 scaffold_15203:6025984-6026135 + -TC--TGTTTGTCTGTCTGTCTGTC----TGTTCAAATGCAAACTAATCTCTAAGTTTTGAAGCAATATATTTCAAACTTCGT----------TTTTT---T--GCTGCGGGC----------------------------------AGTATATGTAT----------CGAATCGGATCACTATATCATATAGCCGC-CATAGGAACAATCAGTCGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group3b:224146-224274 - GTC--CGTCCGTCCGTCTGTCCGTC----CCCTTCAGCGCCTAATGCTCAAAGACTATAAGAGCTAGAGCAACGATGTTTTGGATCCAGACTTCTGTGCAGAATCATAGATA------------------------------------------------------------------------------------------A------------------------------TCGCCATATCTATCAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCT------
droPer2 scaffold_69:224784-224941 - GTC--CGTCCGTCCGTCTGTCCGTC----CCTATCAGCGCCTAGTGCTCAAAGACTATAAGAGCTAGGGCAACAACGTTTTATATCCGGACTTCTGTG---A--TATGTCACA-GCTACAAGTATATCG----------------------------------------------TATG-----ATCGTATGATTAT-TATAGCCAGAATCA--------AGAAAAC-AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13070:41020-41268 - -TC--TGTCCGTCGGTCCGTCTGTC----TGTTTCTACGCAAACTAGTCTCTCAGTTTTAGAGCTATCAAGTTGAAACTTTGCACACACCCTTCTTTC---T--------------------------------------------------ATAAGTCGGAACGGCCGGGATCGGTCGACTATATCCTATAGCTGC-CATATAACTGATTGATCGGAA----A--T----------------------------------------------------------------GCCATAACTTTGGTGTTTTTTATGTTAG------------------------------------------------AG--GGTTAAGACCTTCC------------------------------ATAC-ATG-TTGTATTTGACCAAAATATCTTG--------TGTAAAAA-ATTTCTC------
droBip1 scf7180000395382:19026-19272 - GTC--CGTCTGTCTGTCCGTCTGTCTGTCCGTTTCTACGCGAACTAGTCTCTCAGTTTTAAAGCTATCGTCTTGAAACTTTACACACACCCTTCTTTC---C--TTTGCACGC----------------------------------AGTATATAAGTCGGAA----------CGGCCGACTATATCCTATAGCTGC-CATATAACTGAACGATCGGAA----A--T--------------------------------------------------------G--------ACCCAACTTTTGTGTTTTTGAAGATAG------------------------------------------------AA--GTTTGGGA-CATTTTTAGGTTTGGTTTATTGGTCA----------TA-----------------T------TCTC----------ATAAG--------AA------
droKik1 scf7180000302476:3539015-3539282 + GTC--TGTCCGTCTGTCCACCTGTC----CGTTTCTACGCAAACTAGTCCCTCAGTTTAAAAGCTATCTGAATGAAACTTTGCATATAGTCTTCTATA---T--ACTCTCACT----------------------------------GCTATATATGTCGGAACGGGCCGGATCGGACGACTATATGATATAGCTGC-CATATGAACGATCG--------GGAAATT-AAT--------------------------------------------------A-GGAAAAAAATTATAGCTTCGTTGTTTTTCAACGTAT-------------TTGTATCTA------------------------------CTCTGAG-----------------------------ATATAGGCTTTTTTTATTGT-TATAGAAT------TTTGG--------TATAAA----------------
droFic1 scf7180000448494:998-1249 + ATC--TGTCCGTCTGCCCGTCTGTC----TGTTTCTCTTTAAACTAGTCTCTCAGTTTTAAAGCTATCTTGCTGAAACTTTCCCAAAAGTTGTGTAGT---T--ATTGCA--------------------------------------GTATATAAGTCGGAACGGGCGGGATCGGACGACTATATCGGATAGCTCC-CATACGAA----------------------------------------------------------------------------------AAAATTCTCACGCCATTGTTTTTGATCAGAT-------------CGACTTGAT------------------------------TTCTTCC-----------------------------AGATGGCCTTTCCTAACTAC-TATTGAAT------TTCGGA-------TTTCGA-TTTTTTTCA------
droEle1 scf7180000490738:2947-3202 - GTC--CGTCCGTCCGTCTGTCCGTC----CGTTTATATGCAAACTAGTCTCTCAGTTTTAAAGCTATCTGCATGAAACTTTCCCAAAAGTTGTCTTTC---T--ATTGCAGGT----------------------------------AGTATATAAGTCGGAACGAGCCGGATCGGACGACTATAGCATATAGCTCC-CATAGGAACAATCG--------GAGAAATAAAT----------------------------------------------------GAAAAAAAATTATAACTTTGCTTGT-----------------------------------------------TTTTTAATTTAAGTTT--G------CTTTC------------------------------TTTC-TTG-TTTGTTTTGTTC------TTCGA--------CATAAA--------GC------
droRho1 scf7180000767628:663-920 - GTC--CGTCCGTCTGCCCGTCCGTC----CGTTTCTACGTAAACTAGTCCCTTAGTT---AAGCTACCTGC-TTAAACTTTCCCAAAAGTTGTCTTTT---T--ATTTCAA---------------------------------------ATATATGTCGAAACGAGCAGGATCGGACGATTATATCATTTAGCTCC-CATTGAAACCATCG--------GAAAAA--AAT----------------------------------------------------GTTTAAAAA-TATAACTTTGTT---TT--------------------------------AAATATTTGTT-----------------------------------------GTTCTTTGGTAA----------TATTTAAATAC-TATGGAAT------TACGGTTTTATATCTTATA--------GCGCCCAT
droBia1 scf7180000297083:66766-67039 - GTC--CGTCCGTCCGTCTGTCCGTC----CGTTTCTACGCAAACTTGTCTCTCAGTTTGAAAGCTATCGGGCTGAAACTTTCCCAAAAGTCTTCTTTC---T--ATTGCAGGT----------------------------------AGTATATAAGTCGGAACCATCCGGATCGGACAACTATATCTTATAGCTCC-CATAGGAACTATCG--------GGGAAAA-AAT----------------------------------------------------TAAAAAAATATATATCTTTCGTGATTTTTAAAATAT-------------CCCTTTCTA------------------------------AGCTTGG-----------------------------ATATAACATTTTTAAATTAG-TTATGAAT------TTCAA---------ATTAA-ATT-TTATC------
droTak1 scf7180000410945:4335-4603 - GTC--CGTCCGTCTGTCC----GTC----CGTTTCTACGCAAACTATTCTCTCAGTTTTTAAGCTATCGGGATAAAACTTTCCCAAAAGTCTTCGTTC---T--ATTGCAGGT----------------------------------AGTATATAAGTCGG-ACGAGCCGGATCGGACAACTATATCATATAGCTCT-CATAGGAACAATCG--------GGAAAAA-AAT----------------------------------------------------GTAAAAAAATTATATCTTAGGTGTTTTTAAACCTAT-------------AACATCCTA------------------------------CTTTTGG-----------------------------AAATGTTATTTTTTATCTAA-TTCTGAAT------TTCGA---------ATAAA-ATT-TTTTC------
droEug1 scf7180000409791:98043-98293 - GTC--CGTCCATCCGTCCGTCTGTC----CGTATGAACGCAGAGAACTCAGGAACTATAAGAGATACAGAGTTGAGATTAAACAGGCAGATTCTTGAG---G--CCCATATGCAG--CA-AGTTTATTTCAGCATCCTGCCACGCCCACTATATCTCC--C--------------------------ACAAGCCGCG-GATAA------------------------------CGGTGGAGCCCATAACATTATACTGTATGTCCTCGTTTAACCT-----------------------TA---------TATAA--------------------------CATAT--------------------------TTT------------------------------------------TGTCAATATC-AATCT---------ATTCA---------CCAAA-G-ATTTTTT------
dm3 chr3L:23184549-23184627 + GTC--CGTTTATCTGTCT----GTC----CGTATGAACATCAAGATCTCAAGAACTATAAAAGCTGAAGGGTTGAGATTCAGCATGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 node_30091:224-324 + AGCCATGTCCGTCTGTCCGACTGTC----TGTATAAACGTCAAGATCTCAGGAACTATAAAAGCTAGAAGGCTGAGATTAAGCATACAGTTTCTAAAG---A--CAC------TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------
droSec2 scaffold_30:384574-384677 - GTC--CGTCCGTCTGTCCGT------------ATGAACGTCGAGATCCCAGGAACTATAAAAGCTATAAGGTTGAGATTCCGCATACGCAGCG--------ACTCATAGACGCAGCGCA-AGTTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_3121:532-780 + GTC--CGTCCGTCTGTCT----GTC----CGTATGAACGTCGAGATCTCGGGAACTATAAAAGCTAGAATGTTGAGATAAGGCATACAGACTTCAGAG---A--CATAGACGCAGCGCA-AGATTGTTGATTCATG---------------------------------------------------------TTGC-CACGCCCACAAACCGCCCAAAA-------------CTG---------------------------CCACGCCTAAACT-----------------------TT---------TGAAA--------------------------AATAATTTAATTATTTAATATTTTTTCATT--T--TG-----------------------------GTATTGGTCTTGTAAATTTC-TATCGATT------TTCCA---------AAAAA-CTTTTTGCC------
droEre2 scaffold_4929:21286802-21286996 - GCC--CCTCCGTCTGTCTGTACGTC----CGTATGAACGTCGAGATCTCAGGAACTATAAAAGCTACAAAGTTGAGATTAGGCATGCAGATTTCAAAG---A--CGTAGACACAGCGCA-AGTTTTTTAAATGATGTTGCCAC----------------------------------------GCCCACAAAGCGCA-CATGGGCGTGACAC---------------------------------------------------------CAAAAAT-----------------------TT---------TGAAA--------------------------AATAT----------------------------------------TAATTTTTTT--------------------------------------------------------------------ATTTTCT------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GTC--CGTCCGTCTGCCCGTCCGTC----TGGATCAACGCAAACTCCTACCAGACCGTAAGAGCTACAGAGCTGAAATTTTGCATGTAGTCTTATATA---T--ACCGCAGG----------G----------------------------------------TTATCAAGATCGGGTGATC-GGTCATATAGCTCC-CATAGGAACGATCGGTCGAAA----A--C-AGTGA------------------------------------------C-----------------------TT---------TGATC--------------------------AATATCTTCGTTATTTCCTATGCTAAGATT--GTAGGC-CGTTC------------------------------TTTC-GTC-TGTCATTAGACT------TCTCA--------TATAAA-ACCTTTTCC------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................CCGTCCGTC----TGGATCAACGCAAACTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.30606000
......................................................................................................................................................................................................................................TGA------------------------------------------C-----------------------TT---------TGATC--------------------------AATATCTTCGTTATT.........................................................................................................................26200.10202000
..................................................CAGACCGTAAGAGCTACAG........................................................................................................................................................................................................................................................................................................................................................................................................................19110.09110000
........................................................................................................................................................................................GTCATATAGCTCC-CATAGGAACGATC..........................................................................................................................................................................................................................................................................26150.07101000
...............................................................................................................................................................................................................................A--C-AGTGA------------------------------------------C-----------------------TT---------TGATC--------------------------AATATCTTCGTT............................................................................................................................27200.05100010
......................................................................................................................................................................................................................CGAAA----A--C-AGTGA------------------------------------------C-----------------------TT---------TGATC--------------------------AATATCT.................................................................................................................................27200.05101000
droVir3
GTC--TGTCCGTCTATCCGTCTGTC----TGTTTCTATGCGAACTAGTCCATCAGTTTTAAAGCTATCTTAATGAAACTTTGCACGCAG------------------------------------------------------------CACATATGTGAAAACCAGCTGGATCGGACCACTATATCATATAGCTGC-CATAGGAACGATCGCTCGAAA----A-TT-AA-GG------------------------------------------TTTTGTATGAAA---------AACCATTTTGTTTATCAAGATAT-------------CTAGACCAA------------------------------ACTCGGCA--TTTATTAGTTTTACTTTACTCCTCATATATA-----------------TGCAAAA------TCCTA---------TTAAG-ATC-GGACC------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................TTCTATGCGAACTAGTCCATCAGTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCAAGATAT-------------CTAGACCAA------------------------------ACTCGGC...................................................................................................25200.306004000000000000000000000000010000000100000000000000000000000000
..................................................................................................................................................................................................TGC-CATAGGAACGATCGCTC......................................................................................................................................................................................................................................................................20200.306000000040200000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TATGTGAAAACCAGCTGGATCGGACCAC........................................................................................................................................................................................................................................................................................................28200.255000000000000000000000000005000000000000000000000000000000000000
.......................................................................................................................................................CATATGTGAAAACCAGCTGGATCG..............................................................................................................................................................................................................................................................................................................24200.204000000000000000000000000000000000040000000000000000000000000000
...............................................................................................................................................................................................................................A-TT-AA-GG------------------------------------------TTTTGTATGAAA---------.....................................................................................................................................................................................19200.204003000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................TAGCTGC-CATAGGAACGATCGCTC......................................................................................................................................................................................................................................................................24200.153000000001000000000000000000000000000200000000000000000000000000
.......................................................................................................................................................................................TATCATATAGCTGC-CATAGGAAC..............................................................................................................................................................................................................................................................................23200.153000000000000000000000000000003000000000000000000000000000000000
.....TGTCCGTCTATCCGTCTGTC----TGTTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.131000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................TGC-CATAGGAACGATCGCTCGAAA----A-TT-.........................................................................................................................................................................................................................................................27200.102000000010000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................AA----A-TT-AA-GG------------------------------------------TTTTGTATGAAA---------.....................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CGAAA----A-TT-AA-GG------------------------------------------TTTTGTATGAAA---------.....................................................................................................................................................................................24200.051000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCAAGATAT-------------CTAGACCAA------------------------------ACTCG.....................................................................................................23200.051000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................AGCTGC-CATAGGAACGATCG.........................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................................AACCAGCTGGATCGGACCACTATATC..................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................TAGCTGC-CATAGGAACGATCGC........................................................................................................................................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................AAACCAGCTGGATCGGACCACTATATC..................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TTTATTAGTTTTACTTTACTCCTCA.......................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................GAAA----A-TT-AA-GG------------------------------------------TTTTGTATGAAA---------.....................................................................................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................CAGCTGGATCGGACCACTATATCATAT..............................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TATAGCTGC-CATAGGAACGATCGCTC......................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................ATATAGCTGC-CATAGGAACGATCGC........................................................................................................................................................................................................................................................................25200.051000000001000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CGAAA----A-TT-AA-GG------------------------------------------TTTTGTATGAAA---------A....................................................................................................................................................................................25200.051000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGC-CATAGGAACGATCGCTCGAAA----C-............................................................................................................................................................................................................................................................25200.051000000001000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CAAGATAT-------------CTAGACCAA------------------------------ACTCGGCA--................................................................................................25200.051000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................TAGCTGC-CATAGGAACGATCGCTCGAAA----..............................................................................................................................................................................................................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................A-TT-AA-GG------------------------------------------TTTTGTATGAAA---------A....................................................................................................................................................................................20200.051000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TAGCTGC-CATAGGAACGATCGCTCG.....................................................................................................................................................................................................................................................................25200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
-TC--CGTCCGACCGTCC----GTC----TGTATGAGCAAAAGGCTCTCAGAAGATATAAGAGCTAGAGAGCTGAAATTTGGCATGCATACTCGTGTA---T--ACCATAGGCAGTACG-AGTTTGCTT-------------------------------------------------TATT-TTTCCGATAACTCATCCGATAAATTTTTTATCGAGA----A--T------------------------------------------------------------------AATCGACTTGGTTTTTATACTCATTCACGAAAGTAAATC---------AGTATATTGGTTTTGTGCAATGTCCGTCTT--GCTGTC-CGTC---------------------------------------------------C------GTCT----------GT--------CCGTC------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................A----A--T------------------------------------------------------------------AATCGACTTGGTTTTTATACTCA.................................................................................................................................................................2611.001100000
......................................................................................................................................................................................................................CGAGA----A--T------------------------------------------------------------------AATCGACTTGGTTT..........................................................................................................................................................................2120.501000010
............................................................................................................................................................................................................................................................................................................................TTCACGAAAGTAAATC---------AGTATATTGGTT............................................................................................................................2830.331100000
......................................................................................................................................................................................................................................................................................................................................TAAATC---------AGTATATTGGTTTTGTGCAATG..................................................................................................................2830.331100000
............................................................................................................................................................................................GATAACTCATCCGATAAATTTTTT.........................................................................................................................................................................................................................................................................2440.251100000
........................................................................................................................................................................................................................................................................................................................................AATC---------AGTATATTGGTTTTGTGCAATGTC................................................................................................................28200.102200000
droGri2
-TC--TGTTTGTCTGTCTGTCTGTC----TGTTCAAATGCAAACTAATCTCTAAGTTTTGAAGCAATATATTTCAAACTTCGT----------TTTTT---T--GCTGCGGGC----------------------------------AGTATATGTAT----------CGAATCGGATCACTATATCATATAGCCGC-CATAGGAACAATCAGTCGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
GTC--CGTCCGTCCGTCTGTCCGTC----CCCTTCAGCGCCTAATGCTCAAAGACTATAAGAGCTAGAGCAACGATGTTTTGGATCCAGACTTCTGTGCAGAATCATAGATA------------------------------------------------------------------------------------------A------------------------------TCGCCATATCTATCAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCT------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................AAGACTATAAGAGCTAGAGCAACGATGT...............................................................................................................................................................................................................................................................................................................................................................................................................28202.054100000004100
...................................................AGACTATAAGAGCTAGAGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................21201.803600000000360
.................TGTCCGTC----CCCTTCAGCGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.052102100000000
..................................................AAGACTATAAGAGCTAGAGCAACGC..................................................................................................................................................................................................................................................................................................................................................................................................................25200.751500000001500
................................................CAAAGACTATAAGAGCTAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................21200.701401400000000
...........................................................................TGTTTTGGATCCAGACTTCTGT............................................................................................................................................................................................................................................................................................................................................................................................22200.601200000000120
......................................................................AACGATGTTTTGGATCCAG....................................................................................................................................................................................................................................................................................................................................................................................................19200.4590900000000
.........................................TAATGCTCAAAGACTATAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000500
...........................................................................TGTTTTGGATCCAGACTTCTGTG...........................................................................................................................................................................................................................................................................................................................................................................................23200.2040000000040
......GTCCGTCCGTCTGTCCGTC----CC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530300000000
...................................................AGACTATAAGAGCTAGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................19200.1532000000001
..........................................AATGCTCAAAGACTATAAG................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530000000030
.........................................................TAAGAGCTAGAGCAACGATGT...............................................................................................................................................................................................................................................................................................................................................................................................................21200.1022000000000
........................................................................CGATGTTTTGGATCCAGACTT................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000200
..............................................CTCAAAGACTATAAGAGCTAGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020200000000
..................................................AAGACTATAAGAGCTAGAGCAACGAT.................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000002000
.........................................................TAAGAGCTAGAGCAACGA..................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000100
......................................................................AACGATGTTTTGGATCCAGA...................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
.........................................TAATGCTCAAAGACTATAA.................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.....................................CGCCTAATGCTCAAAGACTATAAG................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
.........................................TAATGCTCAAAGACTATAAGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000010
..........................................................AAGAGCTAGAGCAACGATGTT..............................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
..........................................................................ATGTTTTGGATCCAGACT.................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000000000
........................................CTAATGCTCAAAGACTATAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.................................................AAAGACTATAAGAGCTAGAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
................................................CAAAGACTATAAGAGCTAGAGCAACGA..................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000100000
........................................CTAATGCTCAAAGACTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
GTC--CGTCCGTCCGTCTGTCCGTC----CCTATCAGCGCCTAGTGCTCAAAGACTATAAGAGCTAGGGCAACAACGTTTTATATCCGGACTTCTGTG---A--TATGTCACA-GCTACAAGTATATCG----------------------------------------------TATG-----ATCGTATGATTAT-TATAGCCAGAATCA--------AGAAAAC-AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................CAAAGACTATAAGAGCTAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2270.141100000
.....................................................................................CCGGACTTCTGTG---A--TATGT................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
.....................................................................................CCGGACTTCTGTG---A--TATGTCA..............................................................................................................................................................................................................................................................................................................................................................................21200.051000010
..................GTCCGTC----CCTATCAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
droAna3
-TC--TGTCCGTCGGTCCGTCTGTC----TGTTTCTACGCAAACTAGTCTCTCAGTTTTAGAGCTATCAAGTTGAAACTTTGCACACACCCTTCTTTC---T--------------------------------------------------ATAAGTCGGAACGGCCGGGATCGGTCGACTATATCCTATAGCTGC-CATATAACTGATTGATCGGAA----A--T----------------------------------------------------------------GCCATAACTTTGGTGTTTTTTATGTTAG------------------------------------------------AG--GGTTAAGACCTTCC------------------------------ATAC-ATG-TTGTATTTGACCAAAATATCTTG--------TGTAAAAA-ATTTCTC------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................GTTGAAACTTTGCACACACCC..................................................................................................................................................................................................................................................................................................................................................................................................21200.357070000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAAATATCTTG--------TGTAAAAA-ATTT.........27120.081010000
..........................................................................AAACTTTGCACACACCCTTCTTTC---T--------------------------------------------------A....................................................................................................................................................................................................................................................................................................................................26170.061100000
.................................................................ATCAAGTTGAAACTTTGCACACACC...................................................................................................................................................................................................................................................................................................................................................................................................25190.051010000
...............................................TCTCTCAGTTTTAGAGCTATCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................24190.051001000
............................................................GAGCTATCAAGTTGAAACTTTGCAC........................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
..................................................CTCAGTTTTAGAGCTATCAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000
..............................................................................................................................................................................................TAGCTGC-CATATAACTGATTGATCG.....................................................................................................................................................................................................................................................................25200.051010000
..........................................................................................................................................................AAGTCGGAACGGCCGGGATC...............................................................................................................................................................................................................................................................................................................20200.051010000
.TC--TGTCCGTCGGTCCGTCTGTC----TGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
...................................TACGCAAACTAGTCTCTCAGTTTTAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
droBip1
GTC--CGTCTGTCTGTCCGTCTGTCTGTCCGTTTCTACGCGAACTAGTCTCTCAGTTTTAAAGCTATCGTCTTGAAACTTTACACACACCCTTCTTTC---C--TTTGCACGC----------------------------------AGTATATAAGTCGGAA----------CGGCCGACTATATCCTATAGCTGC-CATATAACTGAACGATCGGAA----A--T--------------------------------------------------------G--------ACCCAACTTTTGTGTTTTTGAAGATAG------------------------------------------------AA--GTTTGGGA-CATTTTTAGGTTTGGTTTATTGGTCA----------TA-----------------T------TCTC----------ATAAG--------AA------SizeHit CountTotal NormTotal
No Reads
droKik1
GTC--TGTCCGTCTGTCCACCTGTC----CGTTTCTACGCAAACTAGTCCCTCAGTTTAAAAGCTATCTGAATGAAACTTTGCATATAGTCTTCTATA---T--ACTCTCACT----------------------------------GCTATATATGTCGGAACGGGCCGGATCGGACGACTATATGATATAGCTGC-CATATGAACGATCG--------GGAAATT-AAT--------------------------------------------------A-GGAAAAAAATTATAGCTTCGTTGTTTTTCAACGTAT-------------TTGTATCTA------------------------------CTCTGAG-----------------------------ATATAGGCTTTTTTTATTGT-TATAGAAT------TTTGG--------TATAAA----------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATC--TGTCCGTCTGCCCGTCTGTC----TGTTTCTCTTTAAACTAGTCTCTCAGTTTTAAAGCTATCTTGCTGAAACTTTCCCAAAAGTTGTGTAGT---T--ATTGCA--------------------------------------GTATATAAGTCGGAACGGGCGGGATCGGACGACTATATCGGATAGCTCC-CATACGAA----------------------------------------------------------------------------------AAAATTCTCACGCCATTGTTTTTGATCAGAT-------------CGACTTGAT------------------------------TTCTTCC-----------------------------AGATGGCCTTTCCTAACTAC-TATTGAAT------TTCGGA-------TTTCGA-TTTTTTTCA------SizeHit CountTotal NormTotal
No Reads
droEle1
GTC--CGTCCGTCCGTCTGTCCGTC----CGTTTATATGCAAACTAGTCTCTCAGTTTTAAAGCTATCTGCATGAAACTTTCCCAAAAGTTGTCTTTC---T--ATTGCAGGT----------------------------------AGTATATAAGTCGGAACGAGCCGGATCGGACGACTATAGCATATAGCTCC-CATAGGAACAATCG--------GAGAAATAAAT----------------------------------------------------GAAAAAAAATTATAACTTTGCTTGT-----------------------------------------------TTTTTAATTTAAGTTT--G------CTTTC------------------------------TTTC-TTG-TTTGTTTTGTTC------TTCGA--------CATAAA--------GC------SizeHit CountTotal NormTotal
No Reads
droRho1
GTC--CGTCCGTCTGCCCGTCCGTC----CGTTTCTACGTAAACTAGTCCCTTAGTT---AAGCTACCTGC-TTAAACTTTCCCAAAAGTTGTCTTTT---T--ATTTCAA---------------------------------------ATATATGTCGAAACGAGCAGGATCGGACGATTATATCATTTAGCTCC-CATTGAAACCATCG--------GAAAAA--AAT----------------------------------------------------GTTTAAAAA-TATAACTTTGTT---TT--------------------------------AAATATTTGTT-----------------------------------------GTTCTTTGGTAA----------TATTTAAATAC-TATGGAAT------TACGGTTTTATATCTTATA--------GCGCCCATSizeHit CountTotal NormTotal
No Reads
droBia1
GTC--CGTCCGTCCGTCTGTCCGTC----CGTTTCTACGCAAACTTGTCTCTCAGTTTGAAAGCTATCGGGCTGAAACTTTCCCAAAAGTCTTCTTTC---T--ATTGCAGGT----------------------------------AGTATATAAGTCGGAACCATCCGGATCGGACAACTATATCTTATAGCTCC-CATAGGAACTATCG--------GGGAAAA-AAT----------------------------------------------------TAAAAAAATATATATCTTTCGTGATTTTTAAAATAT-------------CCCTTTCTA------------------------------AGCTTGG-----------------------------ATATAACATTTTTAAATTAG-TTATGAAT------TTCAA---------ATTAA-ATT-TTATC------SizeHit CountTotal NormTotal
No Reads
droTak1
GTC--CGTCCGTCTGTCC----GTC----CGTTTCTACGCAAACTATTCTCTCAGTTTTTAAGCTATCGGGATAAAACTTTCCCAAAAGTCTTCGTTC---T--ATTGCAGGT----------------------------------AGTATATAAGTCGG-ACGAGCCGGATCGGACAACTATATCATATAGCTCT-CATAGGAACAATCG--------GGAAAAA-AAT----------------------------------------------------GTAAAAAAATTATATCTTAGGTGTTTTTAAACCTAT-------------AACATCCTA------------------------------CTTTTGG-----------------------------AAATGTTATTTTTTATCTAA-TTCTGAAT------TTCGA---------ATAAA-ATT-TTTTC------SizeHit CountTotal NormTotal
No Reads
droEug1
GTC--CGTCCATCCGTCCGTCTGTC----CGTATGAACGCAGAGAACTCAGGAACTATAAGAGATACAGAGTTGAGATTAAACAGGCAGATTCTTGAG---G--CCCATATGCAG--CA-AGTTTATTTCAGCATCCTGCCACGCCCACTATATCTCC--C--------------------------ACAAGCCGCG-GATAA------------------------------CGGTGGAGCCCATAACATTATACTGTATGTCCTCGTTTAACCT-----------------------TA---------TATAA--------------------------CATAT--------------------------TTT------------------------------------------TGTCAATATC-AATCT---------ATTCA---------CCAAA-G-ATTTTTT------SizeHit CountTotal NormTotal
No Reads
dm3
GTC--CGTTTATCTGTCT----GTC----CGTATGAACATCAAGATCTCAAGAACTATAAAAGCTGAAGGGTTGAGATTCAGCATGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................AACTATAAAAGCTGAAGGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................2425.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000003200000001000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AACTATAAAAGCTGAAGGGTTGAGA................................................................................................................................................................................................................................................................................................................................................................................................................2522.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000
...............................................TCAAGAACTATAAAAGCTGAAGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2522.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AACTATAAAAGCTGAAGGGTTGA..................................................................................................................................................................................................................................................................................................................................................................................................................2322.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................CAAGATCTCAAGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CAAGATCTCAAGAACTATAAAAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................2521.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGAACATCAAGATCTCAAGAACTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CAAGAACTATAAAAGCTGAAGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................T----GTC----CGTATGAACATCAAGATCTCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AACTATAAAAGCTGAAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................................................TAAAAGCTGAAGGGTTGAGATTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............TCT----GTC----CGTATGAACATCAAGATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGAAGGGTTGAGATTCAGCATG.......................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................T----GTC----CGTATGAACATCAAGATCTCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CAAGAACTATAAAAGCTGAAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCT----GTC----CGTATGAACATCAAGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TATAAAAGCTGAAGGGTTGAGATTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................TATAAAAGCTGAAGGGTTGAGATTC.............................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................ATCAAGATCTCAAGAACTATAAAAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GAACTATAAAAGCTGAAGGGTTGAGA................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGAAGGGTTGAGATTCAGCATGC......................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............TGTCT----GTC----CGTATGAACATCAAGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AAAAGCTGAAGGGTTGAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CATCAAGATCTCAAGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TCAAGAACTATAAAAGCTGAAGGGTATC..................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ATCAAGATCTCAAGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTGTCT----GTC----CGTATGAACATCAAGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CAAGAACTATAAAAGCTGAAGGGTT....................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TATCTGTCT----GTC----CGTATGAACATCAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AAGAACTATAAAAGCTGAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AACTATAAAAGCTGAAGGGTTGAGAT...............................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
GTC--CGTTTATCTGTCT----GTC----CG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GTTTATCTGTCT----GTC----CGTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................AGATCTCAAGAACTATAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................AAAGCTGAAGGGTTGACGC...............................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droSim2
AGCCATGTCCGTCTGTCCGACTGTC----TGTATAAACGTCAAGATCTCAGGAACTATAAAAGCTAGAAGGCTGAGATTAAGCATACAGTTTCTAAAG---A--CAC------TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................CAGGAACTATAAAAGCTAGAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................242175.503510000001421702851032000
................................................CAGGAACTATAAAAGCTAGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................232014.90298000000025302300022000
...............................................TCAGGAACTATAAAAGCTAGAAGGCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................2819.00900000000100080000
........................................CAAGATCTCAGGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................24107.50750000004521801000000
................................................CAGGAACTATAAAAGCTAGAAGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................2517.00700000023001010000
................................................CAGGAACTATAAAAGCTAGAAGGCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................2715.00500000000000041000
...........................................................AAAGCTAGAAGGCTGAGATTAAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................2512.00200010000001000000
.....................TGTC----TGTATAAACGTCAAGATCTCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000011000000000
................................................CAGGAACTATAAAAGCTAGAAGGCTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000000000020000
................................................CAGGAACTATAAAAGCTAGAAGGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000010001000000
.......................................TCAAGATCTCAGGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2551.80900000034020000000
........................................CAAGATCTCAGGAACTATAAAAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................25101.801800000087300000000
................................................CAGGAACTATAAAAGCTAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................22201.7034000100025000008000
...............................................TCAGGAACTATAAAAGCTAGAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2521.50300000002100000000
.............................................TCTCAGGAACTATAAAAGCTAGAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2721.50300000020100000000
...............................TATAAACGTCAAGATCTCAGGAACTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................2821.50300000000300000000
................................................CAGGAACTATAAAAGCTAGAAGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................2531.33400000022000000000
...............................TATAAACGTCAAGATCTCAGGAACTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2631.33400000000103000000
.........CGTCTGTCCGACTGTC----TG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
...............................................TCAGGAACTATAAAAGCTAGAAGGCTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000000010000
.................................TAAACGTCAAGATCTCAGGAACTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................2621.00200000020000000000
.............................................................................TTAAGCATACAGTTTCTAAAG---A--CAC------............................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.............................TGTATAAACGTCAAGATCTCAGGAACTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2821.00200000001010000000
...........TCTGTCCGACTGTC----TGTATAAACGTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.............................................TCTCAGGAACTATAAAAGCTAGAAGGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
.....................TGTC----TGTATAAACGTCAAGATCTCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
.........CGTCTGTCCGACTGTC----TGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
.............TGTCCGACTGTC----TGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
.............TGTCCGACTGTC----TGTATAAACGTCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
................................................CAGGAACTATAAAAGCTAGAAGGCTGAGA................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
...............TCCGACTGTC----TGTATAAACGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
...........................................GATCTCAGGAACTATAAAAGCTAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................26201.0020000000000117020000
.............TGTCCGACTGTC----TGTATAAACGTCAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.....................TGTC----TGTATAAACGTCAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
....................................................AACTATAAAAGCTAGAAGGCTGAGATTA.............................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000100000000000
.............TGTCCGACTGTC----TGTATAAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
...............TCCGACTGTC----TGTATAAACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
..................................................GGAACTATAAAAGCTAGAAGGCTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
...........................................................................GATTAAGCATACAGTTTCTAAAG---A--CAC------............................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.............TGTCCGACTGTC----TGTATAAACGTCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
.................................................AGGAACTATAAAAGCTAGAAGGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
....................................................AACTATAAAAGCTAGAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2060.83500000500000000000
.................................TAAACGTCAAGATCTCAGGAACTATAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000000001000000
.................................TAAACGTCAAGATCTCAGGAACTATAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000010000000000
........................................CAAGATCTCAGGAACTATAAAAGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................................26100.50500000030200000000
...........................................................AAAGCTAGAAGGCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................1620.50100000000001000000
.................................TAAACGTCAAGATCTCAGGAACTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000100000000
...............................TATAAACGTCAAGATCTCAGGAACTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000000100000000
................................................CAGGAACTATAAAAGCTAGAAGGCTGAT.................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000000010000
.............................TGTATAAACGTCAAGATCTCAGGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000000010000
.......................TC----TGTATAAACGTCAAGATCTCAGGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000000010000
...........................................GATCTCAGGAACTATAAAAGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................25200.45900000000800010000
.....TGTCCGTCTGTCCGACTGTC----................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.40200000000002000000
.......................................TCAAGATCTCAGGAACTATAAAAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................2650.40200000011000000000
........................................CAAGATCTCAGGAACTATAAAAGCTAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................2950.40200000000200000000
...............................TATAAACGTCAAGATCTCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................2230.33100100000000000000
...............................TATAAACGTCAAGATCTCAGGAACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100000000100000000
.GCCATGTCCGTCTGTCCGACTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25100000010000000000
................................................CAGGAACTATAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................15200.25500000000005000000
...................................AACGTCAAGATCTCAGGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2950.20100000010000000000
.......................................TCAAGATCTCAGGAACTATAAAAGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................................2750.20100000001000000000
.....................................CGTCAAGATCTCAGGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2750.20100000000100000000
......................................GTCAAGATCTCAGGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2650.20100000010000000000
...............................TATAAACGTCAAGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1650.20100000000001000000
........................................CAAGATCTCAGGAACTATAAAAGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2850.20100000010000000000
........................................CAAGATCTCAGGAACTATAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................22110.18200000020000000000
.........................................AAGATCTCAGGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................23130.15200000000002000000
........................................CAAGATCTCAGGAACTATAAAAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................25130.15200000001000010000
...............................................TCAGGAACTATAAAAGCTAGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................24200.15300000021000000000
.........CGTCTGTCCGACTGTC----................................................................................................................................................................................................................................................................................................................................................................................................................................................................1670.14100000000001000000
........................................CAAGATCTCAGGAACTATAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................23100.10100000010000000000
.......................................................TATAAAAGCTAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................15200.10200000000002000000
...........................................GATCTCAGGAACTATAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200000000002000000
................................................CAGGAACTATAAAAGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200000002000000000
.............................................TCTCAGGAACTATAAAAGCTAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200000010000010000
........................................CAAGATCTCAGGAACTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................18140.07100000010000000000
......................................GTCAAGATCTCAGGAACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................18170.06100100000000000000
........................................CAAGATCTCAGGAACTATAAAAGTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................26190.05100000010000000000
...........................................GATCTCAGGAACTATAAAAGCTAGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000001000000
.................................................AGGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000001000000000
.............................................TCTCAGGAACTATAAAAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000001000000
............................................ATCTCAGGAACTATAAAAGCTAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000001000000
...............................................TCAGGAACTATAAAAGCTAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000001000000
........................................CAAGATCTCAGGAACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000010000000000
.............................................TCTCAGGAACTATAAAAGCTAGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000010000000000
..............................................CTCAGGAACTATAAAAGCTAG..........................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000001000000
.......................................................TATAAAAGCTAGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
droSec2
GTC--CGTCCGTCTGTCCGT------------ATGAACGTCGAGATCCCAGGAACTATAAAAGCTATAAGGTTGAGATTCCGCATACGCAGCG--------ACTCATAGACGCAGCGCA-AGTTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................CGAGATCCCAGGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2470.5744000
............................................ATCCCAGGAACTATAAAAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................2190.2222000
................................ATGAACGTCGAGATCCCAGGAACTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................26130.1521010
.......................................TCGAGATCCCAGGAACTATAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2570.1411000
.............TGTCCGT------------ATGAACGTCGAGATCCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................25120.0811000
.............TGTCCGT------------ATGAACGTCGAGATCCCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................27120.0810010
.............TGTCCGT------------ATGAACGTCGAGATCCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................26120.0811000
.............TGTCCGT------------ATGAACGTCGAGATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................23120.0811000
.................................TGAACGTCGAGATCCCAGGAACTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................25130.0811000
..................................GAACGTCGAGATCCCAGGAACTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................24130.0811000
.................................TGAACGTCGAGATCCCAGGAACTATAA.................................................................................................................................................................................................................................................................................................................................................................................................................................27130.0811000
...............TCCGT------------ATGAACGTCGAGATCCCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................25130.0811000
.................................TGAACGTCGAGATCCCAGGAACTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................26130.0811000
..................................GAACGTCGAGATCCCAGGAACTA....................................................................................................................................................................................................................................................................................................................................................................................................................................23140.0711000
.................CGT------------ATGAACGTCGAGATCCCAGGAACTA....................................................................................................................................................................................................................................................................................................................................................................................................................................28140.0711000
..................GT------------ATGAACGTCGAGATCCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................21170.0610100
...................T------------ATGAACGTCGAGATCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................18180.0611000
...........................................................................................................AGACGCAGCGCA-AGTTTG...............................................................................................................................................................................................................................................................................................................................................................18200.0510010
........CCGTCTGTCCGT------------ATGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510001
droYak3
GTC--CGTCCGTCTGTCT----GTC----CGTATGAACGTCGAGATCTCGGGAACTATAAAAGCTAGAATGTTGAGATAAGGCATACAGACTTCAGAG---A--CATAGACGCAGCGCA-AGATTGTTGATTCATG---------------------------------------------------------TTGC-CACGCCCACAAACCGCCCAAAA-------------CTG---------------------------CCACGCCTAAACT-----------------------TT---------TGAAA--------------------------AATAATTTAATTATTTAATATTTTTTCATT--T--TG-----------------------------GTATTGGTCTTGTAAATTTC-TATCGATT------TTCCA---------AAAAA-CTTTTTGCC------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................TTGAGATAAGGCATACAGACT.................................................................................................................................................................................................................................................................................................................................................................................................21120.50615000000000
..................................................................................................................................................................................................................................................................................................................................................................................T--T--TG-----------------------------GTATTGGTCTTGTAAATTTC-TATC.............................................2890.22200200000000
......................................................................GTTGAGATAAGGCATACAGAC..................................................................................................................................................................................................................................................................................................................................................................................................21110.18201000100000
........................................................................TGAGATAAGGCATACAGACT.................................................................................................................................................................................................................................................................................................................................................................................................20120.08101000000000
..............................................................................................................................TTGATTCATG---------------------------------------------------------TTGC-CACGCCCACAAAC..........................................................................................................................................................................................................................................................................27120.08100100000000
.......................................................................TTGAGATAAGGCATACAGAC..................................................................................................................................................................................................................................................................................................................................................................................................20120.08101000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTCATT--T--TG-----------------------------GTATTGGTCTTG..........................................................21120.08101000000000
........................C----CGTATGAACGTCGAGATCTCGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................25120.08101000000000
..................................................................................................................................................................................................................................................................................................................................................................................T--T--TG-----------------------------GTATTGGTCTTGTAAATC....................................................22170.06100100000000
......................GTC----CGTATGAACGTCGAGATCTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................25180.06101000000000
.......................TC----CGTATGAACGTCGAGATCTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................24180.06101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATT------TTCCA---------AAAAA-CTTTTTGCC------25200.05101000000000
..............................................................................................................................................................................................................CAAACCGCCCAAAA-------------CTG---------------------------CCACGCCT..............................................................................................................................................................................................................25200.05100100000000
......................................................................................................................................TG---------------------------------------------------------TTGC-CACGCCCACAAACCGCC......................................................................................................................................................................................................................................................................23200.05101000000000
......................................................................................................................................TG---------------------------------------------------------TTGC-CACGCCCACAAACCGC.......................................................................................................................................................................................................................................................................22200.05101000000000
..................................................................................................................................TTCATG---------------------------------------------------------TTGC-CACGCCCA...............................................................................................................................................................................................................................................................................18200.05101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-TATCGATT------TTCCA---------AAAAA-CTTTT..........26200.05100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGATT------TTCCA---------AAAAA-CTTTTTGC.......26200.05100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGATT------TTCCA---------AAAAA-CTTTTTGCC------27200.05100100000000
....................................................................................TACAGACTTCAGAG---A--CATAGA...............................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
...................................................................................................................................................................................................................CGCCCAAAA-------------CTG---------------------------CCACGCCT..............................................................................................................................................................................................................20200.05101000000000
..........................................................................................CTTCAGAG---A--CATAGACGCAG..........................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
droEre2
GCC--CCTCCGTCTGTCTGTACGTC----CGTATGAACGTCGAGATCTCAGGAACTATAAAAGCTACAAAGTTGAGATTAGGCATGCAGATTTCAAAG---A--CGTAGACACAGCGCA-AGTTTTTTAAATGATGTTGCCAC----------------------------------------GCCCACAAAGCGCA-CATGGGCGTGACAC---------------------------------------------------------CAAAAAT-----------------------TT---------TGAAA--------------------------AATAT----------------------------------------TAATTTTTTT--------------------------------------------------------------------ATTTTCT------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................TACAAAGTTGAGATTAGGCATGCAGA...................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.........................................................................................................................GTTTTTTAAATGATGTTGCCAC----------------------------------------......................................................................................................................................................................................................................................................................................................2211.0011000000
........................C----CGTATGAACGTCGAGATCTCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000000
.......................................................................TTGAGATTAGGCATGCAGATT.................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000000

Generated: 05/18/2015 at 12:20 AM