ID:

dwi_803

 Coordinate:

scf2_1100000004512:2442834-2442878 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.9 -3.3 -3.3

Flybase annnotation

intron [Dwil\GK19701-in]; exon [dwil_GLEANR_2316:2]; CDS [Dwil\GK19701-cds]; CDS [Dwil\GK19701-cds]; exon [dwil_GLEANR_2316:3]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
  1. scf2_1100000003252:5105-5127 -
  2. scf2_1100000004510:2606012-2606034 +
  3. scf2_1100000004511:11081515-11081537 +
  4. dwi_803  scf2_1100000004512:2442853-2442875 +
  5. scf2_1100000004521:2723651-2723673 -
  6. scf2_1100000004521:10180692-10180714 +
  7. scf2_1100000004590:2412778-2412800 -
  8. scf2_1100000001001:1273-1295 -
  9. scf2_1100000009657:750-772 -
  10. scf2_1100000004943:346671-346693 -
  11. scf2_1100000004943:4794395-4794417 -
  12. scf2_1100000004943:10624912-10624934 -
  13. scf2_1100000004943:15705860-15705882 +
  14. scf2_1100000004902:11780661-11780683 +
  15. scf2_1100000004909:3306004-3306026 -
  16. scf2_1100000004909:11503730-11503752 -
  17. scf2_1100000004961:4902177-4902199 +
  18. scf2_1100000004963:1846746-1846768 -
  19. scf2_1100000010101:405-427 +
star

Sense Strand Reads

##################################################---------------------------------------------##################################################
CACAATTGGTTCAATGGACAACTGGTGGAAAGCTACAAAGTTATGCCCAAGTTAGTCAGCAGCAGCAGCAGCAACAGCAACAACAGCAACAGCAGCAACAACAGCAGCAACAGCAGCAGCAGCAGCAACATCAGAGTACGCCCAA
**************************************************(((.((..((.((....)).)).))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V119
head
 V118
embryo
 M045
female body
 V117
male body
........................GTGGAAAGCTACAAAGTTATGCC.................................................................................................. 23 0 1 1.00 1 1 0 0 0
.................ACAACTGGTGGAAAGCTACAAAG......................................................................................................... 23 0 1 1.00 1 1 0 0 0
.....................................AAGTTATGCCCAAGTTAGTCAGC..................................................................................... 23 0 1 1.00 1 1 0 0 0
.....................................................................................................................AGCAGCAGCAACATCAGAG......... 19 0 3 0.33 1 0 1 0 0
..............................................................................AACAACAGCAACAGCAGCAACA............................................. 22 0 20 0.30 6 0 1 5 0
.........................................................................................................AGCAACAGCAGCAGCAGC...................... 18 0 20 0.20 4 0 4 0 0
.....................................................................AGCAACAGCAACAACAGCAACAG..................................................... 23 0 19 0.16 3 0 0 3 0
........................................................................AACAGCAACAACAGCAACAGCAGC................................................. 24 0 8 0.13 1 0 1 0 0
.........................................................................ACAGCAACAACAGCAACAGCAGC................................................. 23 0 8 0.13 1 0 0 1 0
.......................................................................................................GCAGCAACAGCAGCAGCAGCA..................... 21 0 20 0.10 2 0 2 0 0
...........................................................................AGCAACAACAGCAACAGCAGC................................................. 21 0 20 0.10 2 0 0 2 0
...................................................................GCAGGAACAGCAACAACAGCAACAG..................................................... 25 1 17 0.06 1 0 1 0 0
......................................................GTCAGCAGCAGCAGCAGCAA....................................................................... 20 0 18 0.06 1 0 0 1 0
..........................................................................................AGCAGCAACAACAGCAGCAACAGCA.............................. 25 0 19 0.05 1 0 0 1 0
.............................................................................CAACAACAGCAACAGCAGCAAC.............................................. 22 0 20 0.05 1 0 0 0 1
....................................................................CAGGAACAGCAACAACAGCAACAG..................................................... 24 1 20 0.05 1 0 0 1 0
..............................................................................................GCAACAACAGCAGCAAAAGCAG............................. 22 1 20 0.05 1 0 0 1 0
...............................................................AGCAGCAGCAACAGCAACAACAGC.......................................................... 24 0 20 0.05 1 0 1 0 0
.......................................................................................AACAGCAGCAACAACAGCAGCA.................................... 22 0 20 0.05 1 0 1 0 0
.......................................................................................AACAGCAGCAACAACAGCA....................................... 19 0 20 0.05 1 0 1 0 0
........................................................................AACAGCAACAACAGCAACAG..................................................... 20 0 20 0.05 1 0 0 1 0
............................................................AGCAGCAGCAGCAACAGCAAC................................................................ 21 0 20 0.05 1 0 1 0 0
...................................................................................................AACAGCAGCAACTGCAGCAGCAGC...................... 24 1 20 0.05 1 0 1 0 0
.............................................................................................AGCAACAACAGCAGCAACAG................................ 20 0 20 0.05 1 1 0 0 0
................................................................................................AACAACAGCAGCAACAGCA.............................. 19 0 20 0.05 1 0 1 0 0
................................................................................................AACAACAGCAGCAACAGC............................... 18 0 20 0.05 1 0 1 0 0
............................................................................GCAACAACAGCAACAGCAGC................................................. 20 0 20 0.05 1 0 1 0 0
...........................................................................................GCAGCAACAACAGCAGCAAC.................................. 20 0 20 0.05 1 0 1 0 0
.................................................................................................ACAACAGCAGCAACAGCA.............................. 18 0 20 0.05 1 0 1 0 0
........................................................................................................CAGCAACAGCAGCAGCAGCA..................... 20 0 20 0.05 1 0 1 0 0
...............................................................................................CAACAACAGCAGCAACAGCAGC............................ 22 0 20 0.05 1 0 1 0 0
.....................................................AGTCAGCAGCAGCAGCAGC......................................................................... 19 0 20 0.05 1 0 1 0 0
.....................................................................AGGAACAGCAACAACAGCAACAGC.................................................... 24 1 20 0.05 1 0 0 1 0
.............................................................................................AGCAACAACAGCAGCAACAGC............................... 21 0 20 0.05 1 0 0 1 0
.....................................................................................................CAGCAGCAACAGCAGCAGCAG....................... 21 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

GTGTTAACCAAGTTACCTGTTGACCACCTTTCGATGTTTCAATACGGGTTCAATCAGTCGTCGTCGTCGTCGTTGTCGTTGTTGTCGTTGTCGTCGTTGTTGTCGTCGTTGTCGTCGTCGTCGTCGTTGTAGTCTCATGCGGGTT
**************************************************(((.((..((.((....)).)).))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V119
head
 V117
male body
....................................................................................................................GTCGTCCTCGTTGTAGTCTCA........ 21 1 1 1.00 1 1 0 0
................................................TTCAAGCAGTCGTCGTCGTG............................................................................. 20 2 6 0.17 1 1 0 0
.......................................................................GTTGTCGTTGTTGTCGTTGTCGT................................................... 23 0 20 0.10 2 2 0 0
............................................................................................................TTGTCGTCGTCGTCGTCGTTGTAGT............ 25 0 13 0.08 1 1 0 0
......................................................................CGTTGTCGTTGTTGTCGTTGTCGT................................................... 24 0 14 0.07 1 1 0 0
....................................................................GTCCTTGTCGTTGTTGTCGTTGTCGT................................................... 26 1 16 0.06 1 1 0 0
....................................................................GTCATTGTCGTTGTTGTCGTTGTCGT................................................... 26 1 16 0.06 1 0 1 0
................................................................CGTCGTCGTTGTCGTTGTTGTCGT......................................................... 24 0 20 0.05 1 1 0 0
.....................................................................TCGTTGTCGTTGTTGTCGT......................................................... 19 0 20 0.05 1 0 0 1
...................................................................CGTCGTTGTCGTTGTTGTCGTTGT...................................................... 24 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004512:2442784-2442928 + dwi_803 CACAATTGGTTCAATGG-----ACAACTGGTGGAAA---G--CT-ACAAAGTTATGCC------------------------------CAAGTTAGTCAGCA-------------------------------------------------------------GC---AGCAGCAGCAACAGCAA---------CAAC------------AGCAACAGCAGCA---------ACA-ACAGCAGCAACAG---------CAGCAGC------AGCAGCAA---CATCAG---AGTACGCCCAA
droVir3 scaffold_12875:9893571-9893703 + CGCAGCTGGTCCAGTGG-----ACCACGGGCGGCAA---G--CT-GCAGAGCTATGCG------------------------------CACGTCAGTCAGCA-------------------------------------------------------------GC---AGCAGCAGCAGCAGCAG---------C------------------------AGCA---------ACA-GCAGCAACAACAG---------CAGCAGC------AGCAACAG---CATCAG---AGCACGCCCAA
droMoj3 scaffold_6496:17141154-17141313 - dmo_1187 CGCAGCTGGTGCAGTGG-----ACAACGGGCGGTAA---G--CT-GCAGAGCTATGCG------------------------------CAAGTGAGTCAGCAGCAGCAG------C----------------------------------------------AAC---AGCAGCAGCAGCAGCAA---------CAACAGCAACAGCAACAA------CAGCA---------GCAG-CAACAACAACAG---------CAGCAGC------AACAACAG---CATCAG---AGCACGCCCAA
droGri2 scaffold_15245:3094809-3094956 + CTCAGCTGGTGCAGTGG-----ACAACAGGTGGCAA---G--CT-GCAGAGCTATGCG------------------------------CAGGTCAGTCAGCA-------------------------------------------------------------TC---AGCAACAGCAGCAGCAG---------CAAC------------AGCAGCAGCAACA---------ACA-ACAGCAGCAGCAA------CAACAGCAGC------AACAGGTT---CATCAG---AGCACGCCCAA
dp5 3:8893455-8893587 + CGCAGCTGGTGCAATGG-----ACGACGGGTGGCAA---A--CT-GCAGAGCTATGCC------------------------------CATGTCAGCCAGCA-------------------------------------------------------------GC---AGCAGCAACAACAACAG---------C------------------------AGCA---------GCA-ACAGCAACAACAG---------CAGCAGC------ACCACCAC---CACCAG---AGCACACCGAA
droPer2 scaffold_4:2778839-2778971 + CGCAGCTGGTGCAATGG-----ACGACGGGTGGCAA---A--CT-GCAGAGCTATGCC------------------------------CATGTCAGCCAGCA-------------------------------------------------------------GC---AGCAGCAACAACAGCAG---------C------------------------AGCA---------GCA-ACAGCAACAACAG---------CAGCAGC------ACCACCAC---CACCAG---AGCACACCGAA
droAna3 scaffold_13337:20188416-20188545 + AGCAGCAACAACAGCAG--------------------------------------GCC------------------------------CAA------CAGCAG------------CAACAAGT--G-----------------GCCACGGCC------CAGCAGC---AGCAACAACAACAGCAG---------CAAC------------AACAGCA---------------GCAG-CAGCAACAGGCA---------CAGCAAC------AGCAGCAG---CACCAG---ACCATGCCGCA
droBip1 scf7180000396730:1815594-1815727 + CACATCAGTGTCCAGAT-----GCCGGA-GCGGGAG---G--CC---AAAG------------------------------------------------------------------------------TCAACCTGGCCCAGGCCATAGTC------CAGAAGC---AGCAACAGCAGCAGCAG---------CAAC------------AGCAACTGCAGCA---------ACA-ACAGCAGCAGCAACAGCAACTGCAGCAAC------------------------------------A
droKik1 scf7180000301967:35244-35388 + AGCAGCAGGTACAA-GT-----ACAGCAGCAGGTT-CA-G--CA-GCAACACCAGGCC------------------------------CAAC----------------------------------------------------------------------ATC---AGCAGCAACAGCAGCAG---------CAAC------------ACCAACAGCAGCAACAGCAGGCTCAC-CAGCAACAACTC---------CAGCAGC------AACAGCAG---CAGCGG---GATGTGGCCAA
droFic1 scf7180000453830:465155-465296 + TGCAGCCCT--CGAGTG-----ACAGC----CGCAA---C--AT-CTACAACAATCCC------------------------------TACATTCCGCCG-------------------------------------------------------------CAGC---AGCAGCAGCAGCAGCAA---------CAAC------------AGCAGCAGCAGCA---------GCA-ACAGCAACTGCAG---------CAGCAGC------AGCAGCAAACGCAGCAG---CGCACCGCCCA
droEle1 scf7180000491212:773789-773924 - AACATGTGGCCCACGGC-----AAGAAGGCAGCCAG---A--AA-GCA-----------------------------CCAGCAACATCTA--------------------------------------------------------------------------------CAGCAGCAACAGCAA---------CAGCAGCAGCAGCAGCAA------CAGCA---------ACAG-CAGCAGCAACTG---------CAGCAAC------AACAG------CAACAGACCAGTGCGCCTAT
droRho1 scf7180000779240:75931-76072 - CACAACAAGATCAGCAG-----CTATTTGCCGCCCA---C--TC-AA---ACGAGTGC------------------------------CACA---AGCAACAA------------C----------------------------------------------AAT---GGCAGCAGCAACAGCAA---------CAAC------------CACAACAGCAGCA---------GCA-ACAGCAACAACAG---------CAGCAGC------AACAACAA---CCTCAG---CGGATCCCTGA
droBia1 scf7180000302113:637760-637907 + AGCATGTGGCCCATGGG-----AAGAAGGCAGCCAG---A--AA-ACA-----------------------------CCAGCAACACCTACAGCAG-------------------C----------------------------------------------AAC---AGCAGCAGCAGCAGCAGCAGCAGCAGCAGC------------AA------CAGCA---------ACAG-CAGCA---ACAG------CAGCAACAGC------AGCAGCAA---CAACAGACCAGTGCGCCTAT
droTak1 scf7180000415877:328715-328847 - AGCAACATCTCCAT-GC-----ACAGCAGCTGT-T-------------------GGCC------------------------------CAGA---G---------------------------------TCAG----------------T------TGCAGCAGC---AGCAGCAACAGCAGCAG---------CAAC------------ACCATCAGCAGCAACAACAG---------GCAGCACAGG---------CAGCAGC------AGCAGCAG---CTGGAG---TGCATGGCC-A
droEug1 scf7180000409456:206585-206725 - AATTGCAACACCAACAACACATGCAGC----AGCAA----------C--------AAA----------------------------------------------------------------TACAGCAACAA----------------C------AGC---AGCAGCAGCAACAACAACAGCAA---------CAAC---------------AACAGCAGCAACAACAGCAGCAG-CAGCAACTACAG---------CAGCAGC------AGCAACAA---CAGCAG---ATTATAC----
dm3 chr2R:13261646-13261788 + AGCAACAGCAGCAAT-A-----ACAACTACTAC-------------CACAGCAATGCCAGCAAGCAGGCAGCACACGCCAGCAACAT-------------------------------------------------------------------------GTATC---AACAGCAGCAGCAGCAG---------CATC------------AGCAACAGCAGCA---------ACA-TCAGCAACATCTG---------CAGCATC------AGCAAC-----------------ACGCGC-A
droSim2 3l:5195134-5195280 - AACAAGTGTTGCCG-GG-----ACAACAGTCG-CAGCAAAGGCTAGCAAAACCACAAG------------------------------CAGAACAAGCAGCAG------------C----------------------------------------------AAC---AGCAGCAGCAGCAGCAA---------CAACAGCGACAGCAGCAA------CATCA---------ACAG-CAGCA---GCAA------CAGCAGCAGC------GGCAGCAG---CAGCAG--------------
droSec2 scaffold_4:2908127-2908262 + AGCAGCTGCAGCATC-A-----GCAGCAGCAG-CAACA-T--CA-GCAG--CAA----------------------------------CAAA---ATCAGCA-------------------------------------------------------------GC---AGCAGCAGCTACAACAG---------CAAC------------ATCAGCAGCAGCAACA------GCT-GCAGCATCAGCAG---------CAGCATC------AGCAGCAA---CATCAG--CAGTACGC----
droYak3 2R:13150320-13150443 - CATAATTTT--AAATGG-----GCAGAA-----------------------------------------------------------------CCAGCGGCAG---CAGCAACATC---------------AC----------------T------TGCAGCAGC---AGCAGCAACAGCAGCAG---------CAAC------------AACAGCAGCAGCA---------ACA-ACAGCAGCAACAA---------CAGCAGC------AGCATCAG---AAACAG--------------
droEre2 scaffold_4929:8564444-8564592 + CACACCGGCTGCAGCAGCA---TCAACGG-CAGCAA----------C--------ACCAG-------------------------------------C---------------------------TGCAGCAC----------CCCCAACACCATCATCAGCAGC---AGCAGCAGCAGTAGCAG---------CAAC------------AGCAGCAGCAG----------------CAGCAGCAGCAG---------TAGCAGCAACAGCAACAGCAA---CA--AG---AAGCCGGCCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CACAATTGGTTCAATGG-----ACAACTGGTGGAAA---G--CT-ACAAAGTTATGCC------------------------------CAAGTTAGTCAGCA-------------------------------------------------------------GC---AGCAGCAGCAACAGCAA---------CAAC------------AGCAACAGCAGCA---------ACA-ACAGCAGCAACAG---------CAGCAGC------AGCAGCAA---CATCAG---AGTACGCCCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................GTGGAAA---G--CT-ACAAAGTTATGCC------------------------------......................................................................................................................................................................................................................2311.00100001
......................ACAACTGGTGGAAA---G--CT-ACAAAG...........................................................................................................................................................................................................................................................2311.00100001
................................................AAGTTATGCC------------------------------CAAGTTAGTCAGC.........................................................................................................................................................................................................2311.00100001
......................................................................................................................................................................................................................................................................AGC------AGCAGCAA---CATCAG---AG.........1930.33100010
.......................................................................................................................................................................................AA---------CAAC------------AGCAACAGCAGCA---------ACA-..................................................................22200.30605010
.................................................................................................................................................................................................................................................AGCAACAG---------CAGCAGC------AGC............................18200.20400040
..............................................................................................................................................................................AGCAACAGCAA---------CAAC------------AGCAACAG....................................................................................23190.16303000
.................................................................................................................................................................................AACAGCAA---------CAAC------------AGCAACAGCAGC................................................................................2480.13100010
..................................................................................................................................................................................ACAGCAA---------CAAC------------AGCAACAGCAGC................................................................................2380.13101000
...............................................................................................................................................................................................................................................GCAGCAACAG---------CAGCAGC------AGCA...........................21200.10200020
....................................................................................................................................................................................AGCAA---------CAAC------------AGCAACAGCAGC................................................................................21200.10202000
...............................................................................................GTCAGCA-------------------------------------------------------------GC---AGCAGCAGCAA...........................................................................................................................20180.06101000
........................................................................................................................................................................................................................AGCAGCA---------ACA-ACAGCAGCAACAG---------CA..........................................25190.05101000
......................................................................................................................................................................................CAA---------CAAC------------AGCAACAGCAGCA---------AC....................................................................22200.05100100
........................................................................................................................................................................AGCAGCAGCAACAGCAA---------CAAC------------AGC.........................................................................................24200.05100010
.....................................................................................................................................................................................................................AACAGCAGCA---------ACA-ACAGCAGCA.........................................................22200.05100010
.....................................................................................................................................................................................................................AACAGCAGCA---------ACA-ACAGCA............................................................19200.05100010
.................................................................................................................................................................................AACAGCAA---------CAAC------------AGCAACAG....................................................................................20200.05101000
.....................................................................................................A-------------------------------------------------------------GC---AGCAGCAGCAACAGCAA---------C...........................................................................................................21200.05100010
...........................................................................................................................................................................................................................AGCA---------ACA-ACAGCAGCAACAG---------............................................20200.05100001
..............................................................................................................................................................................................................................A---------ACA-ACAGCAGCAACAG---------CA..........................................19200.05100010
..............................................................................................................................................................................................................................A---------ACA-ACAGCAGCAACAG---------C...........................................18200.05100010
.....................................................................................................................................................................................GCAA---------CAAC------------AGCAACAGCAGC................................................................................20200.05100010
.........................................................................................................................................................................................................................GCAGCA---------ACA-ACAGCAGCAAC.......................................................20200.05100010
........................................................................................................................................................................................................................................ACA-ACAGCAGCAACAG---------CA..........................................18200.05100010
................................................................................................................................................................................................................................................CAGCAACAG---------CAGCAGC------AGCA...........................20200.05100010
.............................................................................................................................................................................................................................CA---------ACA-ACAGCAGCAACAG---------CAGC........................................22200.05100010
..............................................................................................AGTCAGCA-------------------------------------------------------------GC---AGCAGCAGC.............................................................................................................................19200.05100010
...........................................................................................................................................................................................................................AGCA---------ACA-ACAGCAGCAACAG---------C...........................................21200.05101000
.............................................................................................................................................................................................................................................CAGCAGCAACAG---------CAGCAGC------AG.............................21200.05100001
droVir3
CGCAGCTGGTCCAGTGG-----ACCACGGGCGGCAA---G--CT-GCAGAGCTATGCG------------------------------CACGTCAGTCAGCA-------------------------------------------------------------GC---AGCAGCAGCAGCAGCAG---------C------------------------AGCA---------ACA-GCAGCAACAACAG---------CAGCAGC------AGCAACAG---CATCAG---AGCACGCCCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................A-------------------------------------------------------------GC---AGCAGCAGCAGCAGCA......................................................................................................................19201.00200020000000000000000000000000000000000000000000000000000000000000
.............GTGG-----ACCACGGGCGGCAA---.......................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
...............................................AGAGCTATGCG------------------------------CACGTCAGTCAGC.........................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................AGC------AGCAACAG---CATCAG---AGCACGCCCAA2811.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AGCAACAACAG---------CAGCAGC------A..............................19200.255000000000000000000001000000030000100000000000000000000000000000
............................................................................................................................................................................................................................................GCAGCAACAACAG---------CAGCAGC------AGC............................23200.153002100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A-GCAGCAACAACAG---------CAGCA.......................................19200.153002000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CAG---------CAGCAGC------AGCAACAG---CAT.................21200.102000001000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CAACAG---------CAGCAGC------AGCAAC.........................19200.102002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................CAACAACAG---------CAGCAGC------AGC............................19200.102000000000000000000000020000000000000000000000000000000000000000
.............................................................................................................................................................................CAGCAGCAGCAG---------C------------------------AGCA---------ACA-GCAGCA............................................................26200.102000000000000000000000000000002000000000000000000000000000000000
........................................................................................................................................................................................................................................................G---------CAGCAGC------AGCAACAG---CATCA...............21150.071001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AGCAGCAGCAG---------C------------------------AGCA---------ACA-GCAGCAACAA........................................................29200.051000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AGCAGC------AGCAACAG---CATCA...............19200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................AGCAGCAGCAGCAGCAG---------C------------------------AGCA---------ACA-..................................................................25200.051000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................CA-GCAGCAACAACAG---------CAGCAG......................................21200.051000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................AGCA---------ACA-GCAGCAACAACAG---------C...........................................21200.051000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GCAG---------C------------------------AGCA---------ACA-GCAGCAAC..........................................................20200.051000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................GCAGCAGCAG---------C------------------------AGCA---------ACA-GCAGCAACA.........................................................27200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................AGCAACAACAG---------CAGCAGC------AGCAA..........................23200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................A---------ACA-GCAGCAACAACAG---------CAGCAGC------AGCA...........................28200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GCAGCAGCAGCAG---------C------------------------AGCA---------ACA-GCA...............................................................24200.051000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AGCAACAACAG---------CAGCAGC------AG.............................20200.051000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A-GCAGCAACAACAG---------CAGCAGC------A..............................22200.051000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................AGCAGCAG---------C------------------------AGCA---------ACA-GCAGC.............................................................21200.051000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AACAG---------CAGCAGC------AGCAACAG---C...................21200.051000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................GCAGCAACAACAG---------CAGCAGC------A..............................21200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CA-GCAGCAACAACAG---------CAGCA.......................................20200.051000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................CAGCAGCAGCAGCAG---------C------------------------AGCA---------ACA-G.................................................................24200.051000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................CAACAG---------CAGCAGC------AGCAACAG---C...................22200.051000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................CAACAACAG---------CAGCAGC------AGCAACAG---C...................25200.051000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................ACAACAG---------CAGCAGC------AGCAACAG---CA..................24200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................GCAGCAACAACAG---------CAGCAGC------AGCA...........................24200.051000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................G---------CAGCAGC------AGCAACAG---CATC................20200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GCAG---------C------------------------AGCA---------ACA-GCAGCAACA.........................................................21200.051000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................GCAGCAG---------C------------------------AGCA---------ACA-GCAG..............................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................A-------------------------------------------------------------GC---AGCAGCAGCAGCAGCAG---------C------------------------...................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................AGCA---------ACA-GCAGCAACAACAG---------CAGC........................................24200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CA---------ACA-GCAGCAACAACAG---------CAGCAGC------A..............................26200.051000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GCAACAACAG---------CAGCAGC------AGCAAC.........................23200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ACAG---------CAGCAGC------AGCAACAG---CA..................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AGCAGCAGCAGCAG---------C------------------------AGCA---------ACA-..................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................GCA---------ACA-GCAGCAACAACAG---------CA..........................................21200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ACA-GCAGCAACAACAG---------CAGCAGC------AGC............................26200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
CGCAGCTGGTGCAGTGG-----ACAACGGGCGGTAA---G--CT-GCAGAGCTATGCG------------------------------CAAGTGAGTCAGCAGCAGCAG------C----------------------------------------------AAC---AGCAGCAGCAGCAGCAA---------CAACAGCAACAGCAACAA------CAGCA---------GCAG-CAACAACAACAG---------CAGCAGC------AACAACAG---CATCAG---AGCACGCCCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................AACGGGCGGTAA---G--CT-GCAGAGCTA........................................................................................................................................................................................................................................................2411.001000001
.......................................................................................................................................................................................................................................................AG---------CAGCAGC------AACAACAG---CATC................2170.141100000
...............................................................................................................................................................................................................................................ACAACAACAG---------CAGCAGC------AAC............................20200.102200000
...................................................................................................................................................................................................................A------CAGCA---------GCAG-CAACAACAAC.......................................................20200.102100001
..............................................................................................................................................................................AGCAGCAGCAA---------CAACAGCAACAGCAACA...........................................................................................28200.051000010
.................................................................................................................................................................................................................................................AACAACAG---------CAGCAGC------AACAACAG---C...................24200.051000010
..................................................................................................AGCAGCAGCAG------C----------------------------------------------AAC---AGCAGCA...............................................................................................................................22200.051100000
...........................................................................................................AG------C----------------------------------------------AAC---AGCAGCAGCAGCAGC.......................................................................................................................21200.051001000
droGri2
CTCAGCTGGTGCAGTGG-----ACAACAGGTGGCAA---G--CT-GCAGAGCTATGCG------------------------------CAGGTCAGTCAGCA-------------------------------------------------------------TC---AGCAACAGCAGCAGCAG---------CAAC------------AGCAGCAGCAACA---------ACA-ACAGCAGCAGCAA------CAACAGCAGC------AACAGGTT---CATCAG---AGCACGCCCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................AGCAGCAA------CAACAGCAGC------AAC............................21200.05110
dp5
CGCAGCTGGTGCAATGG-----ACGACGGGTGGCAA---A--CT-GCAGAGCTATGCC------------------------------CATGTCAGCCAGCA-------------------------------------------------------------GC---AGCAGCAACAACAACAG---------C------------------------AGCA---------GCA-ACAGCAACAACAG---------CAGCAGC------ACCACCAC---CACCAG---AGCACACCGAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................CGGGTGGCAA---A--CT-GCAGAGC..........................................................................................................................................................................................................................................................2011.0010000000001
.............................................................................................CAGCCAGCA-------------------------------------------------------------GC---AGCAGCAAC.............................................................................................................................2080.2520000000020
...............................................................................................................................................................................ACAACAACAG---------C------------------------AGCA---------GCA-AC................................................................20200.1020010100000
.............................................................................................................................................................................CAACAACAACAG---------C------------------------AGCA---------GCA-ACA...............................................................23200.1020100100000
.................................................................................................................................................................................AACAACAG---------C------------------------AGCA---------GCA-ACAGC.............................................................21200.1020200000000
................................................................................................................................................................................CAACAACAG---------C------------------------AGCA---------GCA-ACAG..............................................................21200.0510100000000
..............................................................................................AGCCAGCA-------------------------------------------------------------GC---AGCAGCAAC.............................................................................................................................19200.0510100000000
..............................................................................................................................................................................................................................A---------GCA-ACAGCAACAACAG---------CAGC........................................21200.0510100000000
...................................................................................................................................................................................CAACAG---------C------------------------AGCA---------GCA-ACAGCAAC..........................................................22200.0510100000000
............................................................................................................................................................................................................................GCA---------GCA-ACAGCAACAACAG---------CAGCA.......................................24200.0510000100000
.............................................................................................................................................................................CAACAACAACAG---------C------------------------AGCA---------G.....................................................................18200.0510100000000
....................................................................................................................................................................C---AGCAGCAACAACAACAG---------C------------------------AG.................................................................................21200.0510100000000
........................................................................................................................................................................................................................................GCA-ACAGCAACAACAG---------CAGCAGC------...............................23200.0510000001000
...................................................................................................................................................................GC---AGCAGCAACAACAACAG---------C------------------------...................................................................................20200.0510100000000
........................................................................................................................................................................................G---------C------------------------AGCA---------GCA-ACAGCAACAACAG---------C...........................................23200.0510000100000
.........................................................................................................................................................................................................................................CA-ACAGCAACAACAG---------CAGCA.......................................20200.0510000100000
..............................................................................................................................................................................AACAACAACAG---------C------------------------AGCA---------GCA-..................................................................19200.0510100000000
............................................................................................................................................................................................................................................ACAGCAACAACAG---------CAGCAGC------A..............................21200.0510100000000
.........................................................................................................................................................................GCAGCAACAACAACAG---------C------------------------AGCA---------GC....................................................................23200.0510010000000
........................................................................................................................................................................AGCAGCAACAACAACAG---------C------------------------A..................................................................................19200.0510100000000
..................................................................................................AGCA-------------------------------------------------------------GC---AGCAGCAACAACAACAG---------C------------------------AGC................................................................................27200.0510100000000
droPer2
CGCAGCTGGTGCAATGG-----ACGACGGGTGGCAA---A--CT-GCAGAGCTATGCC------------------------------CATGTCAGCCAGCA-------------------------------------------------------------GC---AGCAGCAACAACAGCAG---------C------------------------AGCA---------GCA-ACAGCAACAACAG---------CAGCAGC------ACCACCAC---CACCAG---AGCACACCGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................AA---A--CT-GCAGAGCTATGCC------------------------------CATGT.................................................................................................................................................................................................................2313.003201000
.............................................................................................................................................................................................................................CA---------GCA-ACAGCAACAACAG---------CA..........................................20200.051000010
........................................................................................................................................................................................................................................GCA-ACAGCAACAACAG---------CAGCAGC------...............................23200.051010000
...........................................................................................................................................................................AGCAACAACAGCAG---------C------------------------AGCA---------GC....................................................................21200.051001000
.............................................................................................................................................................................CAACAACAGCAG---------C------------------------AGCA---------GCA-A.................................................................21200.051001000
...................................................................................................GCA-------------------------------------------------------------GC---AGCAGCAACAACAGCAG---------C------------------------A..................................................................................24200.051001000
..............................................................................................................................................................................................................................................AGCAACAACAG---------CAGCAGC------...............................18200.051010000
droAna3
AGCAGCAACAACAGCAG--------------------------------------GCC------------------------------CAA------CAGCAG------------CAACAAGT--G-----------------GCCACGGCC------CAGCAGC---AGCAACAACAACAGCAG---------CAAC------------AACAGCA---------------GCAG-CAGCAACAGGCA---------CAGCAAC------AGCAGCAG---CACCAG---ACCATGCCGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................T--G-----------------GCCACGGCC------CAGCAGC---......................................................................................................................................1811.001010000
.........................................................C------------------------------CAA------CAGCAG------------CAACAAGT--.................................................................................................................................................................................1820.501010000
.....................................................................................................................................................................................GCAG---------CAAC------------AACAGCA---------------GCAG-CAGC.............................................................23200.204040000
...................................................................................................................................................................................................AAC------------AACAGCA---------------GCAG-CAGC.............................................................18200.153030000
........................................................................................................................................................................AGCAACAACAACAGCAG---------CA..........................................................................................................19200.153030000
....................................................................................................................................................................................................AC------------AACAGCA---------------GCAG-CAGCAACA.........................................................21200.102000011
................................................................................................................................................................................CAACAGCAG---------CAAC------------AACAGCA---------------GCAG-C................................................................25150.071010000
...........................................................................................................................................................................AACAACAACAGCAG---------CAAC------------AAC.........................................................................................21180.061100000
......................................................................................................................................................................................................................GCA---------------GCAG-CAGCAACAGGC......................................................18190.051010000
.....................................................................................................................................................................................GCAG---------CAAC------------AACAGCA---------------GCAG-C................................................................20200.051100000
...............................................................................................................................................................AGCAGC---AGCAACAACAACAGC.......................................................................................................................21200.051000001
..........................................................................................................................................................................CAACAACAACAGCAG---------CAAC------------............................................................................................19200.051000001
..................................................................................................................................................................................................CAAC------------AACAGCA---------------GCAG-CAGCAACA.........................................................23200.051010000
................................................................................................................................................................GCAGC---AGCAACAACAACAGCAG---------C...........................................................................................................23200.051010000
.......................................................................................................................................................C------CAGCAGC---AGCAACAACA............................................................................................................................18200.051100000
..................................................................................................................................................................................................................AACAGCA---------------GCAG-CAGCAACA.........................................................19200.051000100
.............................................................................................................................................................................CAACAACAGCAG---------CAAC------------AAC.........................................................................................19200.051010000
.....................................................................................................................................................................................GCAG---------CAAC------------AACAGCA---------------GCAG-CA...............................................................21200.051010000
........................................................................................................................................................................................G---------CAAC------------AACAGCA---------------GCAG-CAGCA............................................................21200.051000100
.....................................................................................................................................................................................GCAG---------CAAC------------AACAGCA---------------GCAG-CAGCA............................................................24200.051010000
....................................................................................................................................................................................................AC------------AACAGCA---------------GCAG-CAGCAAC..........................................................20200.051000001
................................................................................................................................................................................CAACAGCAG---------CAAC------------AACAGCA---------------GCA...................................................................23200.051010000
droBip1
CACATCAGTGTCCAGAT-----GCCGGA-GCGGGAG---G--CC---AAAG------------------------------------------------------------------------------TCAACCTGGCCCAGGCCATAGTC------CAGAAGC---AGCAACAGCAGCAGCAG---------CAAC------------AGCAACTGCAGCA---------ACA-ACAGCAGCAGCAACAGCAACTGCAGCAAC------------------------------------ASizeHit CountTotal NormTotal
No Reads
droKik1
AGCAGCAGGTACAA-GT-----ACAGCAGCAGGTT-CA-G--CA-GCAACACCAGGCC------------------------------CAAC----------------------------------------------------------------------ATC---AGCAGCAACAGCAGCAG---------CAAC------------ACCAACAGCAGCAACAGCAGGCTCAC-CAGCAACAACTC---------CAGCAGC------AACAGCAG---CAGCGG---GATGTGGCCAASizeHit CountTotal NormTotal
No Reads
droFic1
TGCAGCCCT--CGAGTG-----ACAGC----CGCAA---C--AT-CTACAACAATCCC------------------------------TACATTCCGCCG-------------------------------------------------------------CAGC---AGCAGCAGCAGCAGCAA---------CAAC------------AGCAGCAGCAGCA---------GCA-ACAGCAACTGCAG---------CAGCAGC------AGCAGCAAACGCAGCAG---CGCACCGCCCASizeHit CountTotal NormTotal
No Reads
droEle1
AACATGTGGCCCACGGC-----AAGAAGGCAGCCAG---A--AA-GCA-----------------------------CCAGCAACATCTA--------------------------------------------------------------------------------CAGCAGCAACAGCAA---------CAGCAGCAGCAGCAGCAA------CAGCA---------ACAG-CAGCAGCAACTG---------CAGCAAC------AACAG------CAACAGACCAGTGCGCCTATSizeHit CountTotal NormTotal
No Reads
droRho1
CACAACAAGATCAGCAG-----CTATTTGCCGCCCA---C--TC-AA---ACGAGTGC------------------------------CACA---AGCAACAA------------C----------------------------------------------AAT---GGCAGCAGCAACAGCAA---------CAAC------------CACAACAGCAGCA---------GCA-ACAGCAACAACAG---------CAGCAGC------AACAACAA---CCTCAG---CGGATCCCTGASizeHit CountTotal NormTotal
No Reads
droBia1
AGCATGTGGCCCATGGG-----AAGAAGGCAGCCAG---A--AA-ACA-----------------------------CCAGCAACACCTACAGCAG-------------------C----------------------------------------------AAC---AGCAGCAGCAGCAGCAGCAGCAGCAGCAGC------------AA------CAGCA---------ACAG-CAGCA---ACAG------CAGCAACAGC------AGCAGCAA---CAACAGACCAGTGCGCCTATSizeHit CountTotal NormTotal
No Reads
droTak1
AGCAACATCTCCAT-GC-----ACAGCAGCTGT-T-------------------GGCC------------------------------CAGA---G---------------------------------TCAG----------------T------TGCAGCAGC---AGCAGCAACAGCAGCAG---------CAAC------------ACCATCAGCAGCAACAACAG---------GCAGCACAGG---------CAGCAGC------AGCAGCAG---CTGGAG---TGCATGGCC-ASizeHit CountTotal NormTotal
No Reads
droEug1
AATTGCAACACCAACAACACATGCAGC----AGCAA----------C--------AAA----------------------------------------------------------------TACAGCAACAA----------------C------AGC---AGCAGCAGCAACAACAACAGCAA---------CAAC---------------AACAGCAGCAACAACAGCAGCAG-CAGCAACTACAG---------CAGCAGC------AGCAACAA---CAGCAG---ATTATAC----SizeHit CountTotal NormTotal
No Reads
dm3
AGCAACAGCAGCAAT-A-----ACAACTACTAC-------------CACAGCAATGCCAGCAAGCAGGCAGCACACGCCAGCAACAT-------------------------------------------------------------------------GTATC---AACAGCAGCAGCAGCAG---------CATC------------AGCAACAGCAGCA---------ACA-TCAGCAACATCTG---------CAGCATC------AGCAAC-----------------ACGCGC-ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................TAC-------------CACAGCAATGCCAGCAAGCAGG..........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TG---------CAGCATC------AGCAAC-----------------ACGCGC-.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................T-------------------------------------------------------------------------GTATC---AACAGCAGCAGCAG........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AACAGCAGCAAT-A-----ACAACT..................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................ACAT-------------------------------------------------------------------------GTATC---AACAGCAGCAGCAGCAG---------CATC------------............................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AC-------------CACAGCAATGCCAGCAAGCAG...........................................................................................................................................................................................................................................2311.0010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TCAGCAACATCTG---------CAGCATC------AGCAAC-----------------A.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AATGCCAGCAAGCAGGCAGCACACGCCAG.............................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................T-------------------------------------------------------------------------GTATC---AACAGCAGCAGCAGCAG---------CATC------------............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................GCAATGCCAGCAAGCAGGCAGC......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A-TCAGCAACATCTG---------CAGCATC------AGCAAC-----------------A.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................T-------------------------------------------------------------------------GTATC---AACAGCAGCAGCAGCAG---------CAT.........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................GCAATGCCAGCAAGCAGGCAGCACA...................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TCAGCAACATCTG---------CAGCATC------A..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................ACACGCCAGCAACAT-------------------------------------------------------------------------GTATC---AACAGC................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AC-------------CACAGCAATGCCAGCAAGCAGGCAGCA.....................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CAG---------CATC------------AGCAACAGCAGCA---------A.....................................................................2150.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ACAGCAGCAGCAGCAG---------CATC------------AGCAA.......................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................GCAGCAG---------CATC------------AGCAACAGCAGCA---------A.....................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CAG---------CATC------------AGCAACAGCAGCA---------ACA-TCAG..............................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CAG---------CATC------------AGCAACAGCAGCA---------ACA-..................................................................2340.2510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................ATC---AACAGCAGCAGCAGCAG---------T...........................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000200000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................AACAGCAGCAGCAGCAG---------CATC------------............................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GCAG---------CATC------------AGCAACAGCAGCA---------AC....................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AGCAGCAG---------CATC------------AGCAACAGCAGC................................................................................2480.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................GCAGCAG---------CATC------------AGCAACAGC...................................................................................20120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AGCAGCAGCAGCAG---------CATC------------AGCAA.......................................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................CAGCAGCAGCAG---------CATC------------AGCAACA.....................................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ACAGCAGCAGCAGCAG---------CATC------------AGCA........................................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................AGCAG---------CATC------------AGCAACAGC...................................................................................18170.1830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................CAGCAGCAGCAGCAG---------CATC------------AG..........................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000010000
..................................................................................................................................................................ATC---AACAGCAGCAGCAGC.......................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................CAGCAG---------CATC------------AGCAACAGCA..................................................................................20170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AG---------CATC------------AGCAACAGCAGC................................................................................18180.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GCAG---------CATC------------AGCAACAGCA..................................................................................18190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AGCAACAGCAGCA---------ACA-TCAG..............................................................20200.1020000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AGCAGCAG---------CATC------------AGCAAC......................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TC---AACAGCAGCAGCAGCAG---------T...........................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................C---AACAGCAGCAGCAGCAG---------CA..........................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.................................................................................................................................................................................AGCAGCAG---------CATC------------AGCAACAGCAG.................................................................................23100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ACAGCAGCAGCAGCAG---------CATC------------............................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................AGCAGCAG---------CATC------------AGCAACAGC...................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AGCAGCAG---------CATC------------AGCAACAG....................................................................................20110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................GCAG---------CATC------------AGCAACAGCAGC................................................................................20130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CAGCAG---------CATC------------AGCAACAGCAG.................................................................................21140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................ATC---AACAGCAGCAGCAGCAG---------............................................................................................................20150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................ATC------------AGCAACAGCAGCA---------ACA-..................................................................19160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ACAGCAGCAGCAGCAG---------CATC------------A...........................................................................................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................ATC---AACAGCAGCAGCAGCA......................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................................................................................................................................................C---AACAGCAGCAGCAGCAG---------CAT.........................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CAGCAGCAGCAGCAG---------CATC------------AGC.........................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AGCAACAGCAGCA---------ACA-TC................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................CAGCAGCAGCAG---------CATC------------AGC.........................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................AGCAGCAG---------CATC------------AGCAACA.....................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................TC---AACAGCAGCAGCAGC.......................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AGCAACAGCAGCA---------ACA-TCA...............................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AGCAGCAGCAGCAG---------CATC------------AG..........................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................AGCAGCAGCAGCAG---------CATC------------AGC.........................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
AACAAGTGTTGCCG-GG-----ACAACAGTCG-CAGCAAAGGCTAGCAAAACCACAAG------------------------------CAGAACAAGCAGCAG------------C----------------------------------------------AAC---AGCAGCAGCAGCAGCAA---------CAACAGCGACAGCAGCAA------CATCA---------ACAG-CAGCA---GCAA------CAGCAGCAGC------GGCAGCAG---CAGCAG--------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AGCAGCTGCAGCATC-A-----GCAGCAGCAG-CAACA-T--CA-GCAG--CAA----------------------------------CAAA---ATCAGCA-------------------------------------------------------------GC---AGCAGCAGCTACAACAG---------CAAC------------ATCAGCAGCAGCAACA------GCT-GCAGCATCAGCAG---------CAGCATC------AGCAGCAA---CATCAG--CAGTACGC----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................CAGCATCAGCAG---------CAGCATC------AGCA...........................2340.2510010
..................................................................................................................................................................................................CAAC------------ATCAGCAGCAGCAACA------G.....................................................................21110.0910001
............................GCAG-CAACA-T--CA-GCAG--CAA----------------------------------C.....................................................................................................................................................................................................................20130.0810010
........................................................................................................................................................................................G---------CAAC------------ATCAGCAGCAGCAACA------......................................................................21160.0610010
....................................................................................................................................................................................................AC------------ATCAGCAGCAGCAACA------......................................................................18200.0511000
.....................................................................................................................................................................................................C------------ATCAGCAGCAGCAACA------GC....................................................................19200.0510010
.......................................................................................................................................................................................AG---------CAAC------------ATCAGCAGCAGCAA..............................................................................20200.0510001
droYak3
CATAATTTT--AAATGG-----GCAGAA-----------------------------------------------------------------CCAGCGGCAG---CAGCAACATC---------------AC----------------T------TGCAGCAGC---AGCAGCAACAGCAGCAG---------CAAC------------AACAGCAGCAGCA---------ACA-ACAGCAGCAACAA---------CAGCAGC------AGCATCAG---AAACAG--------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................GCAG---------CAAC------------AACAGCAGCAGC................................................................................20200.05100100000000
..................................................................................................................................................................................................................AACAGCAGCAGCA---------ACA-ACAGCAGCA.........................................................25200.05101000000000
...........................................................................................................................................................................AGCAACAGCAGCAG---------CAAC------------A...........................................................................................19200.05101000000000
..........................................................................................................................................................................................................................................A-ACAGCAGCAACAA---------CAGCAGC------AGC............................24200.05101000000000
..................................................................................................................................................................................................................AACAGCAGCAGCA---------ACA-ACAGCAGC..........................................................24200.05101000000000
..............................................................................................................................................................................AACAGCAGCAG---------CAAC------------AACAGCAGCA..................................................................................25200.05101000000000
..............................................................................................................................................................................AACAGCAGCAG---------CAAC------------AACAGCAGC...................................................................................24200.05101000000000
..............................................................................................................................................................................................................................................AGCAGCAACAA---------CAGCAGC------A..............................19200.05101000000000
droEre2
CACACCGGCTGCAGCAGCA---TCAACGG-CAGCAA----------C--------ACCAG-------------------------------------C---------------------------TGCAGCAC----------CCCCAACACCATCATCAGCAGC---AGCAGCAGCAGTAGCAG---------CAAC------------AGCAGCAGCAG----------------CAGCAGCAGCAG---------TAGCAGCAACAGCAACAGCAA---CA--AG---AAGCCGGCCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................GCAACAGCAACAGCAA---CA--AG---AAGCCGGCC..2911.0010100000
............................................................................................................................................................................................................................................................................AGCAACAGCAA---CA--AG---AAGCC......2011.0010001000
.......................................................................................................................................................................................................................................................AG---------TAGCAGCAACAGCAACAGCA........................2220.5010001000
...........................................................................................................................................................................................................................AG----------------CAGCAGCAGCAG---------TAGCAGCAACAG................................2630.3310100000
..................................................................................................................................................................AGC---AGCAGCAGCAGTAGCAG---------CAAC------------AG..........................................................................................2630.3310100000
...................................................................................................................................................................................................AAC------------AGCAGCAGCAG----------------CAGC.............................................................18200.2040000040
..................................................................................................................................................................................................CAAC------------AGCAGCAGCAG----------------CAGC.............................................................19200.2040000040
..........................................................................................................................................................................................................................................................................ACAGCAACAGCAA---CA--AG---A..........1850.2010100000
..........................................................................................................................................................................................................................CAG----------------CAGCAGCAGCAG---------TAGC........................................19200.0510000010
.................................................................................................................................................................CAGC---AGCAGCAGCAGTAGC.......................................................................................................................19200.0510000010
..................................................................................................................................................................................................CAAC------------AGCAGCAGCAG----------------CAGCAGCA.........................................................23200.0510000010
..........................................................................................................................................................TCATCAGCAGC---AGCAGCAGC.............................................................................................................................20200.0510000010
.....................................................................................................................................................................................................................AGCAGCAG----------------CAGCAGCAGCAG---------TA..........................................22200.0510000010

Generated: 05/17/2015 at 11:57 PM