ID:

dwi_777

 Coordinate:

scf2_1100000004512:920466-920616 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.82 -17.8 -17.8 -17.7

Flybase annnotation

CDS [Dwil\GK19612-cds]; exon [dwil_GLEANR_2233:8]; intron [Dwil\GK19612-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATGGCAGCAATGGCTATGCCAATGGCAATTCAACGCCCACTCCAGCTCCTGTTTCGGCTCCTGTAAGTAAAAACCAACTTGTTAACTGTATACTCCTTATGTTTTCTGTGATGTTGGCGTGCTAAAAACAATACTGTCAAGACACACACACACACCCACACCCACACAGCCTCAAGACACACACACACTCAGATATACAGACAAACGAATCAAGAAATGCACCTGAAGTAGCTTTTGGCCCGAACCAAGTT
**************************************************.(((......(((..............((((....((((..........(((....((((.((((((((((..........))).))))..)))))))...)))...........))))...)))).............)))......)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 M020
head
 V117
male body
..................................................................................................................................................CACACACACCCACACCCACACAGCCT............................................................................... 26 0 1 1.00 1 1 0 0 0
.............................................................................................................GATGTCGGAGTGCCAAAAAC.......................................................................................................................... 20 3 9 0.22 2 0 0 2 0
............................................................................................................................................................................................................................TCCTGACGTAACTTTTGGCC........... 20 3 6 0.17 1 0 1 0 0
............................................GATCCAGTTTCGGCTCCT............................................................................................................................................................................................. 18 2 7 0.14 1 0 0 0 1
.............................................................................................................................................................................................................................CCTGAAGGCGCTTTCGGCC........... 19 3 9 0.11 1 0 1 0 0

Anti-sense strand reads

TACCGTCGTTACCGATACGGTTACCGTTAAGTTGCGGGTGAGGTCGAGGACAAAGCCGAGGACATTCATTTTTGGTTGAACAATTGACATATGAGGAATACAAAAGACACTACAACCGCACGATTTTTGTTATGACAGTTCTGTGTGTGTGTGTGGGTGTGGGTGTGTCGGAGTTCTGTGTGTGTGTGAGTCTATATGTCTGTTTGCTTAGTTCTTTACGTGGACTTCATCGAAAACCGGGCTTGGTTCAA
**************************************************.(((......(((..............((((....((((..........(((....((((.((((((((((..........))).))))..)))))))...)))...........))))...)))).............)))......)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
.................................................................................................................................................................AGTGTGTCGGAGTTCTGTGTG..................................................................... 21 1 1 2.00 2 2 0
........................................................................................ACAGGAGGAATACGAAAGAC............................................................................................................................................... 20 3 20 0.05 1 0 1
.......................................GAGGTCATGGACAATGCCG................................................................................................................................................................................................. 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004512:920416-920666 + dwi_777 ATGGCAGC---------AATGGCTATGCCAATGGCAATTCAACGCCCACTCCAGCTCCTGTTTCGGCTCCTGTAAGTAAAAA------C---------CA-------A--CT--------------------------TGTTAACTGT-ATACT---CCTTATGTTTTCTGTGATG---TTGGCGTGCTAAA-AACAATACTGTCAA----------------------GACACACACA----CACACCCAC-----ACCCACAC-AGCCTCAA------GACACACA----------CACACTCAGA-------------TATA--CAG-------------ACAAACGAATCAA------GAAATGC----------------ACCTGAAGTAGCTTTTGGCCCGA------------------------------A-----------C------------CAAGT-T
droVir3 scaffold_12823:1400914-1401167 + dvi_2973 ATGGCAGC---------AATGGCTACTCGAATGGCAATGCCACGC------------CTACACCGGCACCGGTAAGTAAAAG------T---------CATGC-TAAA--CT--------------------------TGTTAACTGT-TCTCT---CCGTGTGTGTTG--T-GCC---CCAGCGTGGTAAA-AACAATCTTGTCAGACA-CTCACAC----------ACA------------CA----CACA---------------CACCCA------CACACACA----------CACTCGCACA-------------CACA--CAA-----------------ATGCATAAAGTAAATGGCTTGAGC---------------------------------CAAGTA-AAAAATGGGGCGACGGGAAA---AAAAGTTTTGTGACCCC------------AAAGA-C
droMoj3 scaffold_6496:500303-500477 - ATGGCAGC---------AATGGCTATGCCAATGGCAATGCCACGC------------CCACTCCGGCACCGGTGAGTACAAT-ACACGTTC------------TG--A---------------------------------------------------CTGTTGATAC--A-GAC---CTG-CATGCCTAC-----------------A-CA----------------------TAAACACCCA----CACACAC-ACACAG--ATGCACTCT--------CTCACA----------C-----------------------ACA--C-----------------AAATGCA--AA------------------------------------------------------GAAATC-------------------------TTCTGACCCC------------GAAAT-G
droGri2 scaffold_15245:5845299-5845521 - ACAGCA---------CCAATGGCTA---CAATGGCAACTCC------------------GCTCCGGCACCGGTAAGTAAAAG------T---------CGCTC-------------------------------T-------------CAACTTGCTAACTGTTCTGTG--T-ACC---CTGGCGTG-CTAA-AACAATCTTGTCAGACA-GA----------------------TATACACACA----CACA-----C------------TCA------CACACACA----------C-----------------------ACA--C-----------------AAATGCACAAAGTAAATGGTTTGAGCCAAGCAAGAAATGCAAAAGG--G------------AGTGAAAA-A---------TAAAACAGCAAAAA-----------C------------AAAAA-A
dp5 3:19520312-19520535 + ACGGCAGC---------AACGGCTACTCCAATGGCAACTCGACCC------------CGGCCCCGTCACCGGTAAGTAACGTTAAAGGTCCCAAGAAGATCTGTT--A--GT--------------------------TGTTAACTGT-TGACTGTTGCCTGTTAACTG--T-TCC---TTGCCATGGCTAA-AACAATTATGTCAAA---------------------AACACACATG----CACAGACAC-----ACACAG------------------------ACACTCTCAGACACA----------G-----ACA----CG---TGTTCGGGGGGCCTCAG----ATAAGGCAAAT-----------------------------------------------------------------------------------------------------------G
droPer2 scaffold_37:522302-522553 + ACGGCAGC---------AACGGCTACTCCAACGGCAACTCGACCC------------CGGCCCCGTCACCGGTAAGTAACGTTAAAGGTCCCAGGAAGATCTGTT--A--GT--------------------------TGTTAACTGT-TGACTGTTGCCTGTTAACTG--T-TCC---TTGCCATGGCTAA-AACAATTATGTCAA----------------------AACACACATG----CACAGACAC-----ACACAG------------------------ACACTCTCAGAAACA----------G-----ACA----CG---TGTT--------CTCAG----ATAAGGCAAATGCTTTGGGC---------------------------------CAGATGAAAA-C---------TGAAAG---AAAAA-----------T------------GAAAG-G
droAna3 scaffold_13266:12536072-12536247 + ATGCTGGC---GCCTCGAACGGCTACTCCAACGGCAGCTCTGCCC------------CCGCCCCGGCTCCGGTAAGTAAAGA------C---------ACCTGTT--ACCGTTGGC-----------------------------TCG-TAACTGTTACTCGTTAACTG--T--------TGGCGTGGCTAA-AACAGC---GTCAGACATCCCACCG----------AAA------------CA----CAGA--GT---------T----------------AGACA----------CAGAGC-AGACTCAG-----ACA-----------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396372:36095-36295 + ATAGTGGC---GCCTCGAATGGCTACTCCAACGGCAGCTCGGCCC------------CAGCTCCGGCTCCGGTAAGTGAAGA------C---------ACCTGTA--ATCGTTGGC-----------------------------TCG-TAACTGTTACCTGTTAACTG--T--------TAGCGTGGCTAAAAACAGC---GTCAGACATCCCACCG----------AAA------------CA----CAGA--GT---------T----------------AGACA----------CAGAGC-AGACTCAG-----ACA---------------------------------AA------GCCTTGC----------------------------------------------------------------------------------ACCTGCAGCCGC---CT-T
droKik1 scf7180000302682:1839386-1839592 - ATGGCGGC---GGCTCCAATGGCTACTCCAATGGCAACTCCACCC------------CAGCCCCGGCACCGGTAAGTGAAGA------T---------TGCTT------------------------------TT-----CTACCTCT-A------CTCCTGTTAACTG--TTTCC---CGGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCA---------AAAA------------CA----CAGA-------------TATATGTA----TGGATATAGA----------CACA----------G-----ACA-AAA--------------------------------CGAAGGCGGGGGG---------------------------TTT-----------------------------------------C---------CCCTTGCCAGC---ATC-T
droFic1 scf7180000453809:159378-159583 - ACGGTGGC---AGCTCGAACGGCTACTCCAATGGAAACTCCA------------------CTCCGGCTCCGGTGAGTAAAGT------G---------T------------GTGGCGT--------------TCCCCG----CACCGTCCA--CGTAAATTGTTAACTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCG----------AAA------------CA----CAGA-------TAG--CCTTATAGCTTTATAGATATAGA----------CACA----------G-----AA-CACA--GAACG----------CTCGA------AAAACAAGG---------------------------------------------------------------------------------------------------------G-C
droEle1 scf7180000491107:644267-644455 - ACGGTGGCTCTAACTCGAACGGCTACTCCAATGGAAACTCCG------------------CCCCGGCACCGGTAAGTAAAGA------C---------ATGTGTA--GTAGGTGGA-----A---------AACC-------------CCACCTGTTAAGTGTTAACTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCAACG----------AAA------------CA----CAGA-------------TGTATA--------GATATAGA----------CACA----------G-----AAACACG--CT--------------TCA-----------------------------------------------------------------------------------------------------------------------AAG-A
droRho1 scf7180000779911:447511-447732 + ACGGTGGCTCGAACTCGAACGGCTACTCCAACGGAAACTCCGCCC------------CCGCCCCGGCACCGGTGAGTAAAGA------T---------ATCTG----GCGGGTGGA-----A---------AGCC-------------CCACCTGTTAAATGTTAACTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCG----------AAA------------CT----CAGA-------------TGTATAGATATAGATATATAGA----------CACA----------G-----AAACACG--CTA----CAAAGGGCCTCG---------------AGTTTTGAGC---------------------------------------------------------------------------------------------AAAA-A
droBia1 scf7180000302292:3993915-3994112 + ACGGTGGC---AACTCGAACGGCTACTCCAATGGGAACTCCGCCC------------CCGCCCCGGCACCGGTGAGTACAGA------T---------TCCTG----GGAGGTGGT-----------------TA-------------CCCTTCCTTAAGTGTTTGCTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACTG----------AAA------------CA----CAGA-------------CGTATGTA----GACGTATAGA----------CACA----------G-----AAA-AC----------------------------------AGGAGTCTTCGGG---------------------------------CGGA-------------------------------------------------------------G
droTak1 scf7180000415241:15485-15675 + ACGGAGGC---AACTCGAATGGATACTCGAATGGAAACTCCACCC------------CCGCCCCGGCACCGGTAAGTGAAGA------T---------TCC---------------------------------A-------------CCCCCTCTTAAGTGTTAACTG--T-TCCCTGCTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCG----------AAA------------CA----CAGA-------------TGTATATA------GATATAGA----------CACA----------G-----AAA-ACACAG---GT------------------------------------------------------------------------------------------------------------TCTTGAGTCG------------GAGGA-A
droEug1 scf7180000409672:563682-563919 - ACGGTGGC---AACTCGAACGGCTACTCCAATGGAAACTCCGCCC------------CCGCTCCGGCACCGGTAAGTAAAGA------C---------TTCTGG---CCAGGTGGCAATATAAAAATAAAAAACA-------------CCACCTGTTAAGTGTTAACTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACTG--------AAAAA------------CA----CAGA-------------TATATATA------TCTATAGA----------CACA----------GATATAGAACACA--G-C-------------TCAG------GAGGA----GAAATGT----------------------------------------------------------------------------------GTATGGGGAAGA---AA-T
dm3 chr2R:11664501-11664738 - ACGGTGGC---CACTCGAACGGCTACTCCAATGGAAACTCCACCC------------CTGCTCCGGCACCGGTAAGTACAGA------T---------TCC-G----GCAGGTGGCAATAGA---------AGTC-------------CCACCTGTCAAGTGTTAAGTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCG--------GAAAA------------CA----CAGT-------------TGTATCGA------GATAGAGA----------CACAGCCAAA-------------CACA--CAA-------------TCAG------AAGGCAAAAGCACTGGGT---------------------------------CGAAGGTAAATGTGCGG-------------------------------------------AGGG-T
droSim2 2r:12330660-12330896 - ACGGTGGC---AACTCGAACGGCTACTCCAATGGAAACTCCACCC------------CTGCTCCGGCACCGGTAAGTACAGA------T---------TCC-G----CCAGGTGGCATCATA---------AGTC-------------CCACCTGTCAAGTGTTAAGTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCGCCG--------GAAAA------------CA----CAGT-------------TGTATCGA------GATAGAGA----------CACAGCCAAA-------------CACA--CAA-------------TCAG------AAGGCAAGAGCACGGGGT---------------------------------CGAAGGAAAATATTCAG--------------------------------------------AGG-G
droSec2 scaffold_1:9158133-9158359 - ACGGTGGC---AACTCGAACGGCTACTCCAATGGAAACTCCACCC------------CTGCTCCGGCACCGGTAAGTACCGA------T---------TCC-G----CCAGGTGGCATCAGA---------AGTC-------------CCACCTGTCAGGTGTTAAGTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCG--------GAAAA------------CA----CAGT-------------TGTATCGA------GATAGAGA----------CACAGCCAAA-------------CACA--CAA-------------TCAG------AAGGCAAGAGCACGGGGT---------------------------------CGAAGGAA------------------------------------------------------AA-T
droYak3 2R:17322330-17322566 + ACGGTGGC---AACTCGAACGGCTACTCCAATGGAAACTCCACCC------------CTGCTCCGGCACCGGTAAGTACAGA------T---------TCC-G----CCAGGTGGCCATAGA---------AGTC-------------CCACCTGTCAAGTGTTAAGTG--T-TCC---CTGCCGTGGCTAAAAACAAT---GTCAGACA-CTCACCG--------AAAAA------------CA----CAGA-------------TGTATCGA------GATAGAAA----------CACAGCCAAACT-----------CACA--CAA-------------TCAG------AAGGCAAAGGCAGTGGG---------------------------TTT-------------------------------------------T----------TGGGGAAAATCTGC-T
droEre2 scaffold_4845:14198054-14198293 + ACGGTGGC---AGCTCGAACGGCTACTCCAATGGAAACTCCGCCC------------CAGCTCCGGCACCGGTAAGTACAGA------T---------TCC-G----CCAGGTGGCAGTAGAAGTGCC-TAAGTT-------------CCACCTGTCAAGTGTTAAGTG--T-TCC---CTGCCGTGGCTAA-AACAAG---GTCAGACA-CTCGCCGAAAAATAAGAAAA------------CA----CAGA-------------CGTATCGA------GATAGAGA----------CACAGCCAAA-------------CACA--CAA-------------TCAG-----------------------T---------------------------------TGAGGGAAAATATGCGG--------------------------------------CGGC---TTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
ATGGCAGC---------AATGGCTATGCCAATGGCAATTCAACGCCCACTCCAGCTCCTGTTTCGGCTCCTGTAAGTAAAAA------C---------CA-------A--CT--------------------------TGTTAACTGT-ATACT---CCTTATGTTTTCTGTGATG---TTGGCGTGCTAAA-AACAATACTGTCAA----------------------GACACACACA----CACACCCAC-----ACCCACAC-AGCCTCAA------GACACACA----------CACACTCAGA-------------TATA--CAG-------------ACAAACGAATCAA------GAAATGC----------------ACCTGAAGTAGCTTTTGGCCCGA------------------------------A-----------C------------CAAGT-TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................CACA----CACACCCAC-----ACCCACAC-AGCCT.......................................................................................................................................................................................................2611.00100010
droVir3
ATGGCAGC---------AATGGCTACTCGAATGGCAATGCCACGC------------CTACACCGGCACCGGTAAGTAAAAG------T---------CATGC-TAAA--CT--------------------------TGTTAACTGT-TCTCT---CCGTGTGTGTTG--T-GCC---CCAGCGTGGTAAA-AACAATCTTGTCAGACA-CTCACAC----------ACA------------CA----CACA---------------CACCCA------CACACACA----------CACTCGCACA-------------CACA--CAA-----------------ATGCATAAAGTAAATGGCTTGAGC---------------------------------CAAGTA-AAAAATGGGGCGACGGGAAA---AAAAGTTTTGTGACCCC------------AAAGA-CSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................ATGGCAATGCCACGC------------CTACACCGG....................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................CTGT-TCTCT---CCGTGTGTGTTG--...........................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
....................GGCTACTCGAATGGCAATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....CAGC---------AATGGCTACTCGAATGGCAATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.......................TACTCGAATGGCAATGCCACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................CGAATGGCAATGCCACGC------------CT...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CA------------CA----CACA---------------CACCCA------CACACACA----------CACT........................................................................................................................................................................2670.141001000000000000000000000000000000000000000000000000000000000000
droMoj3
ATGGCAGC---------AATGGCTATGCCAATGGCAATGCCACGC------------CCACTCCGGCACCGGTGAGTACAAT-ACACGTTC------------TG--A---------------------------------------------------CTGTTGATAC--A-GAC---CTG-CATGCCTAC-----------------A-CA----------------------TAAACACCCA----CACACAC-ACACAG--ATGCACTCT--------CTCACA----------C-----------------------ACA--C-----------------AAATGCA--AA------------------------------------------------------GAAATC-------------------------TTCTGACCCC------------GAAAT-GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......GC---------AATGGCTATGCCAATGGCAATGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
....CAGC---------AATGGCTATGCCAATGGCAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droGri2
ACAGCA---------CCAATGGCTA---CAATGGCAACTCC------------------GCTCCGGCACCGGTAAGTAAAAG------T---------CGCTC-------------------------------T-------------CAACTTGCTAACTGTTCTGTG--T-ACC---CTGGCGTG-CTAA-AACAATCTTGTCAGACA-GA----------------------TATACACACA----CACA-----C------------TCA------CACACACA----------C-----------------------ACA--C-----------------AAATGCACAAAGTAAATGGTTTGAGCCAAGCAAGAAATGCAAAAGG--G------------AGTGAAAA-A---------TAAAACAGCAAAAA-----------C------------AAAAA-ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
ACGGCAGC---------AACGGCTACTCCAATGGCAACTCGACCC------------CGGCCCCGTCACCGGTAAGTAACGTTAAAGGTCCCAAGAAGATCTGTT--A--GT--------------------------TGTTAACTGT-TGACTGTTGCCTGTTAACTG--T-TCC---TTGCCATGGCTAA-AACAATTATGTCAAA---------------------AACACACATG----CACAGACAC-----ACACAG------------------------ACACTCTCAGACACA----------G-----ACA----CG---TGTTCGGGGGGCCTCAG----ATAAGGCAAAT-----------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................TGGCAACTCGACCC------------CGGCCCC......................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020101000000
.................................GCAACTCGACCC------------CGGCCCC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................ACTCGACCC------------CGGCCCCGTC...................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000000
...................................AACTCGACCC------------CGGCCCCGTCACC................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...............................TGGCAACTCGACCC------------CGGCCCCGTCACCG...............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..............................ATGGCAACTCGACCC------------CGGCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................GGCAACTCGACCC------------CGGCCCC......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................TGGCAACTCGACCC------------CGGCCCCGTC...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............................ATGGCAACTCGACCC------------CGGCCCCGTC...................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
ACGGCAGC---------AACGGCTACTCCAACGGCAACTCGACCC------------CGGCCCCGTCACCGGTAAGTAACGTTAAAGGTCCCAGGAAGATCTGTT--A--GT--------------------------TGTTAACTGT-TGACTGTTGCCTGTTAACTG--T-TCC---TTGCCATGGCTAA-AACAATTATGTCAA----------------------AACACACATG----CACAGACAC-----ACACAG------------------------ACACTCTCAGAAACA----------G-----ACA----CG---TGTT--------CTCAG----ATAAGGCAAATGCTTTGGGC---------------------------------CAGATGAAAA-C---------TGAAAG---AAAAA-----------T------------GAAAG-GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................ACGGCAACTCGACCC------------CGGCCCCGT....................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
..................ACGGCTACTCCAACGGCAACTCGACCC------------C............................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
........................ACTCCAACGGCAACTCGACCC------------CGGCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
......................CTACTCCAACGGCAACTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................TTGGGC---------------------------------CAGATGAAAA-C---------TGAAA........................................2211.001100000
droAna3
ATGCTGGC---GCCTCGAACGGCTACTCCAACGGCAGCTCTGCCC------------CCGCCCCGGCTCCGGTAAGTAAAGA------C---------ACCTGTT--ACCGTTGGC-----------------------------TCG-TAACTGTTACTCGTTAACTG--T--------TGGCGTGGCTAA-AACAGC---GTCAGACATCCCACCG----------AAA------------CA----CAGA--GT---------T----------------AGACA----------CAGAGC-AGACTCAG-----ACA-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......GC---GCCTCGAACGGCTACTCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
..............TCGAACGGCTACTCCAACGGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................CTCCAACGGCAGCTCTGCCC------------CCGCCCC......................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.TGCTGGC---GCCTCGAACGGCTACTCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..............................ACGGCAGCTCTGCCC------------CCGCCCC......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................AGCTCTGCCC------------CCGCCCCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........................CCAACGGCAGCTCTGCCC------------CCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...........................CCAACGGCAGCTCTGCCC------------CCGCCCCGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
..GCTGGC---GCCTCGAACGGCTACTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...............................CGGCAGCTCTGCCC------------CCGCCCCGGCTCC................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..........................TCCAACGGCAGCTCTGCCC------------CCGCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....................GGCTACTCCAACGGCAGCTCTGCCC------------CC...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...................CGGCTACTCCAACGGCAGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................ACTCCAACGGCAGCTCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....GGC---GCCTCGAACGGCTACTCCAACGGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.................AACGGCTACTCCAACGGCAGCTCTGCCC------------.............................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
....................................GCTCTGCCC------------CCGCCCCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................GCTACTCCAACGGCAGCTCTGCCC------------CCG..........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................AACGGCTACTCCAACGGCAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................GCTACTCCAACGGCAGCTCTGCCC------------.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
ATGCTGGC---GCCTCGAACGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...CTGGC---GCCTCGAACGGCTACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................CTACTCCAACGGCAGCTCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................AACGGCAGCTCTGCCC------------CCGCCCCGG....................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
ATGCTGGC---GCCTCGAACGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...................................AGCTCTGCCC------------CCGCCCCGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
ATAGTGGC---GCCTCGAATGGCTACTCCAACGGCAGCTCGGCCC------------CAGCTCCGGCTCCGGTAAGTGAAGA------C---------ACCTGTA--ATCGTTGGC-----------------------------TCG-TAACTGTTACCTGTTAACTG--T--------TAGCGTGGCTAAAAACAGC---GTCAGACATCCCACCG----------AAA------------CA----CAGA--GT---------T----------------AGACA----------CAGAGC-AGACTCAG-----ACA---------------------------------AA------GCCTTGC----------------------------------------------------------------------------------ACCTGCAGCCGC---CT-TSizeHit CountTotal NormTotal
No Reads
droKik1
ATGGCGGC---GGCTCCAATGGCTACTCCAATGGCAACTCCACCC------------CAGCCCCGGCACCGGTAAGTGAAGA------T---------TGCTT------------------------------TT-----CTACCTCT-A------CTCCTGTTAACTG--TTTCC---CGGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCA---------AAAA------------CA----CAGA-------------TATATGTA----TGGATATAGA----------CACA----------G-----ACA-AAA--------------------------------CGAAGGCGGGGGG---------------------------TTT-----------------------------------------C---------CCCTTGCCAGC---ATC-TSizeHit CountTotal NormTotal
No Reads
droFic1
ACGGTGGC---AGCTCGAACGGCTACTCCAATGGAAACTCCA------------------CTCCGGCTCCGGTGAGTAAAGT------G---------T------------GTGGCGT--------------TCCCCG----CACCGTCCA--CGTAAATTGTTAACTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCG----------AAA------------CA----CAGA-------TAG--CCTTATAGCTTTATAGATATAGA----------CACA----------G-----AA-CACA--GAACG----------CTCGA------AAAACAAGG---------------------------------------------------------------------------------------------------------G-CSizeHit CountTotal NormTotal
No Reads
droEle1
ACGGTGGCTCTAACTCGAACGGCTACTCCAATGGAAACTCCG------------------CCCCGGCACCGGTAAGTAAAGA------C---------ATGTGTA--GTAGGTGGA-----A---------AACC-------------CCACCTGTTAAGTGTTAACTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCAACG----------AAA------------CA----CAGA-------------TGTATA--------GATATAGA----------CACA----------G-----AAACACG--CT--------------TCA-----------------------------------------------------------------------------------------------------------------------AAG-ASizeHit CountTotal NormTotal
No Reads
droRho1
ACGGTGGCTCGAACTCGAACGGCTACTCCAACGGAAACTCCGCCC------------CCGCCCCGGCACCGGTGAGTAAAGA------T---------ATCTG----GCGGGTGGA-----A---------AGCC-------------CCACCTGTTAAATGTTAACTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCG----------AAA------------CT----CAGA-------------TGTATAGATATAGATATATAGA----------CACA----------G-----AAACACG--CTA----CAAAGGGCCTCG---------------AGTTTTGAGC---------------------------------------------------------------------------------------------AAAA-ASizeHit CountTotal NormTotal
No Reads
droBia1
ACGGTGGC---AACTCGAACGGCTACTCCAATGGGAACTCCGCCC------------CCGCCCCGGCACCGGTGAGTACAGA------T---------TCCTG----GGAGGTGGT-----------------TA-------------CCCTTCCTTAAGTGTTTGCTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACTG----------AAA------------CA----CAGA-------------CGTATGTA----GACGTATAGA----------CACA----------G-----AAA-AC----------------------------------AGGAGTCTTCGGG---------------------------------CGGA-------------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droTak1
ACGGAGGC---AACTCGAATGGATACTCGAATGGAAACTCCACCC------------CCGCCCCGGCACCGGTAAGTGAAGA------T---------TCC---------------------------------A-------------CCCCCTCTTAAGTGTTAACTG--T-TCCCTGCTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCG----------AAA------------CA----CAGA-------------TGTATATA------GATATAGA----------CACA----------G-----AAA-ACACAG---GT------------------------------------------------------------------------------------------------------------TCTTGAGTCG------------GAGGA-ASizeHit CountTotal NormTotal
No Reads
droEug1
ACGGTGGC---AACTCGAACGGCTACTCCAATGGAAACTCCGCCC------------CCGCTCCGGCACCGGTAAGTAAAGA------C---------TTCTGG---CCAGGTGGCAATATAAAAATAAAAAACA-------------CCACCTGTTAAGTGTTAACTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACTG--------AAAAA------------CA----CAGA-------------TATATATA------TCTATAGA----------CACA----------GATATAGAACACA--G-C-------------TCAG------GAGGA----GAAATGT----------------------------------------------------------------------------------GTATGGGGAAGA---AA-TSizeHit CountTotal NormTotal
No Reads
dm3
ACGGTGGC---CACTCGAACGGCTACTCCAATGGAAACTCCACCC------------CTGCTCCGGCACCGGTAAGTACAGA------T---------TCC-G----GCAGGTGGCAATAGA---------AGTC-------------CCACCTGTCAAGTGTTAAGTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCG--------GAAAA------------CA----CAGT-------------TGTATCGA------GATAGAGA----------CACAGCCAAA-------------CACA--CAA-------------TCAG------AAGGCAAAAGCACTGGGT---------------------------------CGAAGGTAAATGTGCGG-------------------------------------------AGGG-TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................CCC------------CTGCTCCGGCACCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACTCGAACGGCTACTCCAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATGGAAACTCCACCC------------CT...........................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CTCCAATGGAAACTCCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACTCGAACGGCTACTCCAATGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCACCC------------CTGCTCCGGCACCG...............................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CACCTGTCAAGTGTTAAGTG--T-TCC---CTGCC..............................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CACTGGGT---------------------------------CGAAGGTAAATGTGC...................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATGGAAACTCCACCC------------CTGCTCCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AAAGCACTGGGT---------------------------------CGAAGGTAAATGTG....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CA----CAGT-------------TGTATCGA------GATAGAGA----------CACA........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................AATAGA---------AGTC-------------CCACCTGTCA........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............ACTCGAACGGCTACTCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TAGAGA----------CACAGCCAAA-------------CACA--CAA-------------TCAG------AA...................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TGGCAATAGA---------AGTC-------------CCACCTGTCAAGTG....................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACGGCTACTCCAATGGAAACTCCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AACGGCTACTCCAATGGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CTGCCGTGGCTAA-AACAAT---GT..........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGGCTACTCCAATGGAAACTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CAAA-------------CACA--CAA-------------TCAG------AAGGCA...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AA------------CA----CAGT-------------TGTATCGA------GATAGAGA----------CACA........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................CGGCTACTCCAATGGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CACCC------------CTGCTCCGGCACCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AAA------------CA----CAGT-------------TGTATCGA------GATAG.........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................ACCC------------CTGCTCCGGCACCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GGCTACTCCAATGGAAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACTCGAACGGCTACTCCAATGGAAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TGTCAAGTGTTAAGTG--T-TCC---C..................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCGAACGGCTACTCCAATGGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TGTATCGA------GATAGAGA----------CACAGCCAAA-------------.....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................CGGTAAGTACAGA------T---------TCC-G----GCA........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CTCGAACGGCTACTCCAATGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AGCCAAA-------------CACA--CAA-------------TCAG------AAGGC................................................................................................................2311.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GGCTACTCCAATGGAAACTCCACCC------------.............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCGAACGGCTACTCCAATGGAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AGAGA----------CACAGCCAAA-------------CACA--C..............................................................................................................................................2011.0010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAGCACTGGGT---------------------------------CGAAGGT...........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CC------------CTGCTCCGGCACCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCACCC------------CTGCTCCGGCACCGGTG............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AA-AACAAT---GTCAGACA-CTCACCG--------GAA.................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................CGGCTACTCCAATGGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CCAATGGAAACTCCACCC------------CTGCTCCGGCA..................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................ACA-CTCACCG--------GAAAA------------CA----CAGT-------------............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................................AGT-------------TGTATCGA------GATAGAGA----------CA..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............ACTCGAACGGCTACTCCAATGGAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CAATGGAAACTCCACCC------------CTGCTCC......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................TAGA---------AGTC-------------CCACCTGTCAAGTGTTAAG...............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CA----CAGT-------------TGTATCGA------GATAGAG.......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AAT---GTCAGACA-CTCACCG--------GA..................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TGGCAATAGA---------AGTC-------------CCACCTGTCAAG......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................A------------CA----CAGT-------------TGTATCGA------GAT...........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................A------T---------TCC-G----GCAGGTGGCACC...............................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............CGAACGGCTACTCCATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................17100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACGGTGGC---AACTCGAACGGCTACTCCAATGGAAACTCCACCC------------CTGCTCCGGCACCGGTAAGTACAGA------T---------TCC-G----CCAGGTGGCATCATA---------AGTC-------------CCACCTGTCAAGTGTTAAGTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCGCCG--------GAAAA------------CA----CAGT-------------TGTATCGA------GATAGAGA----------CACAGCCAAA-------------CACA--CAA-------------TCAG------AAGGCAAGAGCACGGGGT---------------------------------CGAAGGAAAATATTCAG--------------------------------------------AGG-GSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
ACGGTGGC---AACTCGAACGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
.....................................................................................................................................................................................................AT---GTCAGACA-CTCGCCG--------GA..................................................................................................................................................................................................................................................1912.00200200000000000000
...........................................................................................................................................................................................................................................................GT-------------TGTATCGA------GATAGAGA----------C...........................................................................................................................................................................1912.00200200000000000000
........................ACTCCAATGGAAACTCCACCC------------CT...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001000000000000
.....GGC---AACTCGAACGGCTACTCCAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
...................................AACTCCACCC------------CTGCTCCGGCACC................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.CGGTGGC---AACTCGAACGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.......C---AACTCGAACGGCTACTCCAATGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
droSec2
ACGGTGGC---AACTCGAACGGCTACTCCAATGGAAACTCCACCC------------CTGCTCCGGCACCGGTAAGTACCGA------T---------TCC-G----CCAGGTGGCATCAGA---------AGTC-------------CCACCTGTCAGGTGTTAAGTG--T-TCC---CTGCCGTGGCTAA-AACAAT---GTCAGACA-CTCACCG--------GAAAA------------CA----CAGT-------------TGTATCGA------GATAGAGA----------CACAGCCAAA-------------CACA--CAA-------------TCAG------AAGGCAAGAGCACGGGGT---------------------------------CGAAGGAA------------------------------------------------------AA-TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................AACTCCACCC------------CTGCTCCGGCACCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.......C---AACTCGAACGGCTACTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...............................TGGAAACTCCACCC------------CTGCTCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
...GTGGC---AACTCGAACGGCTACTCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
..............................ATGGAAACTCCACCC------------CTGCT........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
........................................................................................................................................................................................................................................................................................................................................................CAG------AAGGCAAGAGCACGG......................................................................................................1811.0010010
droYak3
ACGGTGGC---AACTCGAACGGCTACTCCAATGGAAACTCCACCC------------CTGCTCCGGCACCGGTAAGTACAGA------T---------TCC-G----CCAGGTGGCCATAGA---------AGTC-------------CCACCTGTCAAGTGTTAAGTG--T-TCC---CTGCCGTGGCTAAAAACAAT---GTCAGACA-CTCACCG--------AAAAA------------CA----CAGA-------------TGTATCGA------GATAGAAA----------CACAGCCAAACT-----------CACA--CAA-------------TCAG------AAGGCAAAGGCAGTGGG---------------------------TTT-------------------------------------------T----------TGGGGAAAATCTGC-TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............TCGAACGGCTACTCCAATGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................AGAAA----------CACAGCCAAACT-----------C....................................................................................................................................................1811.00100100000000
...............CGAACGGCTACTCCAATGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
............ACTCGAACGGCTACTCCAATGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.......................TACTCCAATGGAAACTCCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
............ACTCGAACGGCTACTCCAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000
......................CTACTCCAATGGAAACTCCACCC------------CT...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000
................GAACGGCTACTCCAATGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
...........AACTCGAACGGCTACTCCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.......C---AACTCGAACGGCTACTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.............................AATGGAAACTCCACCC------------CTGCTCC......................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.......................................................................................................................AGA---------AGTC-------------CCACCTGTCAAGTGTTAAGT..............................................................................................................................................................................................................................................................................................................2711.00100000000001
.........................................ACCC------------CTGCTCCGGCACCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................2020.50100100000000
droEre2
ACGGTGGC---AGCTCGAACGGCTACTCCAATGGAAACTCCGCCC------------CAGCTCCGGCACCGGTAAGTACAGA------T---------TCC-G----CCAGGTGGCAGTAGAAGTGCC-TAAGTT-------------CCACCTGTCAAGTGTTAAGTG--T-TCC---CTGCCGTGGCTAA-AACAAG---GTCAGACA-CTCGCCGAAAAATAAGAAAA------------CA----CAGA-------------CGTATCGA------GATAGAGA----------CACAGCCAAA-------------CACA--CAA-------------TCAG-----------------------T---------------------------------TGAGGGAAAATATGCGG--------------------------------------CGGC---TTTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................CCAATGGAAACTCCGCCC------------CAGCTCC......................................................................................................................................................................................................................................................................................................................................................................................................................2512.0021100000
......GC---AGCTCGAACGGCTACTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
..................................................................................................................................................................................................................................................................................................................................ACA--CAA-------------TCAG-----------------------T---------------------------------TGAGGGA...........................................................1811.0010000100
.......................TACTCCAATGGAAACTCCGCCC------------C............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...............................................................................................................................................................................................A-AACAAG---GTCAGACA-CTCGCCG............................................................................................................................................................................................................................................................2211.0010001000
................................GGAAACTCCGCCC------------CAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
............GCTCGAACGGCTACTCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.....GGC---AGCTCGAACGGCTAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
...........AGCTCGAACGGCTACTCCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..........................TCCAATGGAAACTCCGCCC------------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
....................................ACTCCGCCC------------CAGCTCCGGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.............................AATGGAAACTCCGCCC------------CAGCTCCGGCACC................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
..................................AAACTCCGCCC------------CAGCTCCGGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.....................GCTACTCCAATGGAAACTCCGCCC------------.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
ACGGTGGC---AGCTCGAACGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000

Generated: 05/17/2015 at 11:51 PM