ID:

dwi_69

 Coordinate:

scf2_1100000004921:520-591 +

 Confidence:

Known Ortholog

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.0 -34.0 -34.0

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. dwi_67  scf2_1100000004902:74453-74474 -
  2. dwi_69  scf2_1100000004921:520-541 +
star
  1. dwi_67  scf2_1100000004902:74404-74426 -
  2. dwi_69  scf2_1100000004921:568-590 +

Sense Strand Reads

CAACTGAGCCACATCATCATCTTCGCCGACATGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAATTATTCAAATCTTTGACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAAAGTGCCCGAGTGCCTGAGTGAATTTTGAA
***********************************.(((((..(((((((((((((((((((((((.(((((.((((............))))...))))).))))))))))).))))))))))))...)))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V117
male body		 V118
embryo
 V119
head
..................................................CTAAGGAAATAGTAGCCGTGAT.................................................................................................... 22 0 2 4428.00 8856 8652 106 85 11 2
...................................................TAAGGAAATAGTAGCCGTGAT.................................................................................................... 21 0 2 2529.00 5058 4940 69 47 2 0
...................................................TAAGGAAATAGTAGCCGTGATT................................................................................................... 22 0 2 1353.50 2707 2647 39 21 0 0
..................................................CTAAGGAAATAGTAGCCGTGA..................................................................................................... 21 0 2 501.50 1003 986 2 15 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTAGAT................................................... 23 0 2 335.50 671 664 0 2 3 2
...................................................TAAGGAAATAGTAGCCGTGA..................................................................................................... 20 0 2 307.00 614 602 0 10 2 0
..................................................CTAAGGAAATAGTAGCCGTGATT................................................................................................... 23 0 2 268.00 536 531 2 2 1 0
..................................................................................................CACAGTTGCTGTTTCTTTTAGA.................................................... 22 0 2 243.50 487 487 0 0 0 0
.................................................TCTAAGGAAATAGTAGCCGTGA..................................................................................................... 22 0 2 217.50 435 423 5 7 0 0
....................................................AAGGAAATAGTAGCCGTGAT.................................................................................................... 20 0 2 217.50 435 435 0 0 0 0
.................................................................................................TCACAGTTGCTGTTTCTTTTAGA.................................................... 23 0 2 186.50 373 373 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGAC.................................................................................................... 22 1 2 153.50 307 268 32 7 0 0
....................................................AAGGAAATAGTAGCCGTGATT................................................................................................... 21 0 2 135.50 271 271 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTTCTTTT....................................................... 22 0 2 97.00 194 193 0 1 0 0
................................................................................................ATCACAGTTGCTGTTTCTTTTAG..................................................... 23 0 2 89.50 179 179 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTTCTTT........................................................ 21 0 2 80.00 160 159 0 1 0 0
.................................................................................................TCACAGTTGCTGTTTCTTTTAG..................................................... 22 0 2 77.00 154 153 0 1 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTAG..................................................... 21 0 2 48.50 97 97 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTAGATT.................................................. 24 1 2 42.00 84 84 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGATA................................................................................................... 23 1 2 41.00 82 82 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTG...................................................................................................... 20 0 2 38.00 76 73 0 2 0 1
...................................................................................................ACAGTTGCTGTTTCTTTTAGAT................................................... 22 0 2 28.50 57 57 0 0 0 0
................................................................................................ATCACAGTTGCTGTTTCTTTT....................................................... 21 0 2 26.50 53 52 0 1 0 0
...................................................TAAGGAAATAGTAGCCGTGAC.................................................................................................... 21 1 2 26.00 52 48 4 0 0 0
....................................................AAGGAAATAGTAGCCGTGA..................................................................................................... 19 0 2 24.50 49 49 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGATA................................................................................................... 22 1 2 23.50 47 47 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGATC................................................................................................... 23 1 2 21.50 43 42 1 0 0 0
...................................................................................................ACAGTTGCTGTTTCTTTTAGA.................................................... 21 0 2 19.50 39 39 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTTCTTTTA...................................................... 23 0 2 18.50 37 36 0 1 0 0
...................................................TAAGGAAATAGGAGCCGTGAT.................................................................................................... 21 1 2 18.00 36 35 0 1 0 0
................................................................................................ATCACAGTTGCTGTTTCTTTTA...................................................... 22 0 2 17.50 35 35 0 0 0 0
.....................................................AGGAAATAGTAGCCGTGAT.................................................................................................... 19 0 2 17.50 35 35 0 0 0 0
.................................................TCTAAGGAAATAGTAGCCGTGAT.................................................................................................... 23 0 2 15.50 31 30 1 0 0 0
.................................................TCTAAGGAAATAGTAGCCGTG...................................................................................................... 21 0 2 12.50 25 25 0 0 0 0
...................................................TAAGGAAATAGAAGCCGTGAT.................................................................................................... 21 1 2 11.50 23 23 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTG...................................................................................................... 19 0 2 11.00 22 21 0 1 0 0
..................................................CTAAGGAAATAGTAGCCGTGACT................................................................................................... 23 1 2 10.50 21 17 4 0 0 0
...................................................TAAGGAAATAGTAGCCGTGATC................................................................................................... 22 1 2 10.50 21 19 2 0 0 0
...................................................TAAGGAAATAGTAGCCGTGATTT.................................................................................................. 23 0 2 10.00 20 20 0 0 0 0
..................................................CTAAGGAAATAATAGCCGTGAT.................................................................................................... 22 1 2 10.00 20 20 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGATTT.................................................................................................. 24 0 2 9.00 18 18 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTTCTT......................................................... 20 0 2 9.00 18 18 0 0 0 0
.....................................................AGGAAATAGTAGCCGTGATT................................................................................................... 20 0 2 8.50 17 17 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTAGAC................................................... 23 1 2 8.00 16 8 8 0 0 0
....................................................AAGGAAATAGTAGCCGTGATTT.................................................................................................. 22 0 2 8.00 16 15 0 1 0 0
................................................................................................ATCACAGTTGCTGTTTCTTT........................................................ 20 0 2 7.50 15 15 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTAGATA.................................................. 24 0 2 7.50 15 15 0 0 0 0
......................................................GGAAATAGTAGCCGTGAT.................................................................................................... 18 0 2 7.00 14 14 0 0 0 0
.................................................CCTAAGGAAATAGTAGCCGTGAT.................................................................................................... 23 1 2 6.50 13 13 0 0 0 0
...................................................................................................ACAGTTGCTGTTTCTTTTAG..................................................... 20 0 2 6.50 13 13 0 0 0 0
...................................................TAAGGAAATAGGAGCCGTGATT................................................................................................... 22 1 2 6.50 13 13 0 0 0 0
..................................................CTAAGGAAATATTAGCCGTGAT.................................................................................................... 22 1 2 6.00 12 11 0 1 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTA...................................................... 20 0 2 6.00 12 12 0 0 0 0
.................................................................................................TCACAGTTGCTGTTTCTTTTA...................................................... 21 0 2 5.50 11 11 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGACA................................................................................................... 23 2 2 5.50 11 11 0 0 0 0
..................................................CTAAGGAAATAGTAGCCTTGAT.................................................................................................... 22 1 2 5.50 11 9 1 1 0 0
...................................................................................................ACAGTTGCTGTTTCTTTTAGATT.................................................. 23 1 2 5.00 10 10 0 0 0 0
...................................................TAAGGAAATAGTAGCCTTGAT.................................................................................................... 21 1 2 5.00 10 10 0 0 0 0
....................................................................................................CAGTTGCTGTTTCTTTTAGAT................................................... 21 0 2 5.00 10 10 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGATG................................................................................................... 23 1 2 5.00 10 10 0 0 0 0
...................................................TAAGGAAATAGAAGCCGTGATT................................................................................................... 22 1 2 5.00 10 10 0 0 0 0
..................................................CTAAGGAAATAGAAGCCGTGAT.................................................................................................... 22 1 2 4.50 9 9 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTTCTTTTAG..................................................... 24 0 2 4.50 9 9 0 0 0 0
...................................................................................................ACAGTTGCTGTTTCTTTTAGATA.................................................. 23 0 2 4.00 8 8 0 0 0 0
......................................................................................................GTTGCTGTTTCTTTTAGAT................................................... 19 0 2 4.00 8 8 0 0 0 0
..................................................CTAAGGAAATAGGAGCCGTGAT.................................................................................................... 22 1 2 4.00 8 8 0 0 0 0
..................................................CTAAGAAAATAGTAGCCGTGAT.................................................................................................... 22 1 2 4.00 8 8 0 0 0 0
.....................................................AGGAAATAGTAGCCGTGA..................................................................................................... 18 0 2 4.00 8 8 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGATG................................................................................................... 22 1 2 4.00 8 8 0 0 0 0
..................................................CTAAGGAAATAGTAGCCG........................................................................................................ 18 0 2 3.50 7 6 1 0 0 0
..................................................CTAAGGAGATAGTAGCCGTGAT.................................................................................................... 22 1 2 3.50 7 7 0 0 0 0
..................................................CTAAGGAAATACTAGCCGTGAT.................................................................................................... 22 1 2 3.50 7 7 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGACC................................................................................................... 23 2 2 3.50 7 5 2 0 0 0
..................................................CTAAGGAAATAATAGCCGTGA..................................................................................................... 21 1 2 3.50 7 7 0 0 0 0
..................................................CTAAGGAAATGGTAGCCGTGAT.................................................................................................... 22 1 2 3.00 6 6 0 0 0 0
..................................................CTAAGGAAGTAGTAGCCGTGAT.................................................................................................... 22 1 2 3.00 6 6 0 0 0 0
....................................................AAGGAAATAGTAGCCGTGATA................................................................................................... 21 1 2 3.00 6 6 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTAGATC.................................................. 24 1 2 3.00 6 6 0 0 0 0
..................................................CTAGGGAAATAGTAGCCGTGAT.................................................................................................... 22 1 2 3.00 6 6 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGT....................................................................................................... 19 0 2 3.00 6 6 0 0 0 0
..................................................CTAAGGAAATAGCAGCCGTGAT.................................................................................................... 22 1 2 2.50 5 5 0 0 0 0
..................................................CTAATGAAATAGTAGCCGTGAT.................................................................................................... 22 1 2 2.50 5 5 0 0 0 0
...................................................TAAGGAAGTAGTAGCCGTGAT.................................................................................................... 21 1 2 2.50 5 5 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGCGAT.................................................................................................... 22 1 2 2.50 5 5 0 0 0 0
......................................................GGAAATAGTAGCCGTGATT................................................................................................... 19 0 2 2.50 5 5 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGACT................................................................................................... 22 1 2 2.50 5 5 0 0 0 0
..................................................TTAAGGAAATAGTAGCCGTGAT.................................................................................................... 22 1 2 2.50 5 4 0 1 0 0
..................................................CTAAGGAAATAGTAGCCGTGAA.................................................................................................... 22 1 2 2.50 5 5 0 0 0 0
.................................................................................................TCACAGTTGCTGTTTCTTTT....................................................... 20 0 2 2.50 5 5 0 0 0 0
.................................................ACTAAGGAAATAGTAGCCGTGAT.................................................................................................... 23 1 2 2.50 5 5 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTAAT.................................................................................................... 22 1 2 2.50 5 5 0 0 0 0
...................................................TAAGAAAATAGTAGCCGTGAT.................................................................................................... 21 1 2 2.00 4 4 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTAGAA................................................... 23 1 2 2.00 4 4 0 0 0 0
.................................................TCTAAGGAAATAGTAGCCGTGAA.................................................................................................... 23 1 2 2.00 4 4 0 0 0 0
...................................................TAAGGAAATAGCAGCCGTGATT................................................................................................... 22 1 2 2.00 4 4 0 0 0 0
................................................................................................ATCACAGTTGCTGTTTCTTTTAGA.................................................... 24 0 2 2.00 4 4 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCTTTT....................................................... 19 0 2 2.00 4 4 0 0 0 0
...................................................TAAGGAAATAGTAGCGGTGAT.................................................................................................... 21 1 2 2.00 4 4 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGATTG.................................................................................................. 23 1 2 2.00 4 3 0 1 0 0
.....................................................................................................AGTTGCTGTTTCTTTTAGAT................................................... 20 0 2 2.00 4 4 0 0 0 0
...................................................TAAGGAAATAGTAGCCTTGATT................................................................................................... 22 1 2 2.00 4 3 0 1 0 0
...................................................TAAGGAAATAGTAGCCGCGATT................................................................................................... 22 1 2 2.00 4 4 0 0 0 0
...................................................TAAGGAAATAGCAGCCGTGAT.................................................................................................... 21 1 2 2.00 4 4 0 0 0 0
..............................................................................................CTATCACAGTTGCTGTTTCTTTT....................................................... 23 1 2 1.50 3 3 0 0 0 0
..................................................CTAAGGAAATAGTATCCGTGA..................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
..................................................CTGAGGAAATAGTAGCCGTGAT.................................................................................................... 22 1 2 1.50 3 3 0 0 0 0
..................................................CCAAGGAAATAGTAGCCGTGAT.................................................................................................... 22 1 2 1.50 3 3 0 0 0 0
....................................................AAGGAAATAGTAGCCGTGAC.................................................................................................... 20 1 2 1.50 3 3 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTTATT................................................................................................... 22 1 2 1.50 3 3 0 0 0 0
..................................................CTAAGGAAATAGTGGCCGTGAT.................................................................................................... 22 1 2 1.50 3 3 0 0 0 0
...................................................TAAGGAAATAGTAGTCGTGAT.................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
...................................................TAAGGAAATACTAGCCGTGAT.................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
....................................................AAGGAAATAGTGGCCGTGATT................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
..................................................CTAAGGAAATAGTAGACGTGAT.................................................................................................... 22 1 2 1.50 3 3 0 0 0 0
.................................................TCTAAGGAAATAGTAGCCGTGT..................................................................................................... 22 1 2 1.50 3 3 0 0 0 0
..................................................TTAAGGAAATAGTAGCCGTGATT................................................................................................... 23 1 2 1.50 3 3 0 0 0 0
...............................................................................................TATCACAGTTGTTGTTTCTTT........................................................ 21 1 2 1.50 3 3 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTAGATG.................................................. 24 1 2 1.50 3 3 0 0 0 0
...................................................TAAGGAAATAATAGCCGTGATT................................................................................................... 22 1 2 1.50 3 2 1 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGG..................................................................................................... 21 1 2 1.50 3 0 3 0 0 0
....................................................................................................CAGTTGCTGTTTCTTTTAGA.................................................... 20 0 2 1.50 3 3 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGGT.................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
...................................................TAAGGAAATAGTAGCCGCGAT.................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTTCTTTTAGA.................................................... 25 0 2 1.50 3 3 0 0 0 0
...................................................TAAGGAAATAATAGCCGTGAT.................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
..................................................CTAAGGAAATAGTATCCGTGAT.................................................................................................... 22 1 2 1.50 3 3 0 0 0 0
....................................................AAGGAAATAGTGGCCGTGAT.................................................................................................... 20 1 2 1.50 3 3 0 0 0 0
..................................................CTAAGGAAATAGTACCCGTGAT.................................................................................................... 22 1 2 1.50 3 3 0 0 0 0
.................................................TCTAAGGAAATAGTAGCCGTGG..................................................................................................... 22 1 2 1.50 3 0 3 0 0 0
..................................................CTAAGTAAATAGTAGCCGTGAT.................................................................................................... 22 1 2 1.50 3 3 0 0 0 0
.................................................GCTAAGGAAATAGTAGCCGTGAT.................................................................................................... 23 1 2 1.50 3 3 0 0 0 0
.................................................GCTAAGGAAATAGTAGCCGTGATT................................................................................................... 24 1 2 1.50 3 3 0 0 0 0
..................................................CTAAGGAAATAGTAGCCTTGATT................................................................................................... 23 1 2 1.50 3 3 0 0 0 0
...................................................TAAGGAGATAGTAGCCGTGAT.................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
...................................................TGAGGAAATAGTAGCCGTGAT.................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
..................................................GTAAGGAAATAGTAGCCGTGATT................................................................................................... 23 1 2 1.50 3 3 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGAA.................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGGGAT.................................................................................................... 22 1 2 1.50 3 2 1 0 0 0
...................................................TAAGGAAATAGTGGCCGTGAT.................................................................................................... 21 1 2 1.50 3 3 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTCTTTTTA...................................................... 23 2 5 1.20 6 0 0 0 6 0
...................................................TAAGGAAATAGTAGCCGTGATTTT................................................................................................. 24 0 2 1.00 2 2 0 0 0 0
..................................................CTAAGGAAATAATAGCCGTGATT................................................................................................... 23 1 2 1.00 2 2 0 0 0 0
..................................................CTAAGGAAACAGTAGCCGTGAT.................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGG..................................................................................................... 20 1 2 1.00 2 0 2 0 0 0
.................................................CCTAAGGAAATAGTAGCCGTGA..................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
...................................................CAAGGAAATAGTAGCCGTGATT................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGGAGCCGTGA..................................................................................................... 20 1 2 1.00 2 2 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTCAT.................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
..................................................CTAATGAAATAGTAGCCGTGAC.................................................................................................... 22 2 2 1.00 2 0 2 0 0 0
...................................................TAAGGAAATAGTAGCCGGGAT.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
...................................................TAGGGAAATAGTAGCCGTGAT.................................................................................................... 21 1 2 1.00 2 1 1 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGGT.................................................................................................... 22 1 2 1.00 2 1 0 1 0 0
...............................................................................................TATCACAGTGGCTGTTCCTTTTA...................................................... 23 2 5 1.00 5 0 0 0 5 0
..................................................................................................CACAGTTGCTGTTTCTTTTAGAG................................................... 23 1 2 1.00 2 2 0 0 0 0
.................................................TCTAAGGAAATAGTAGCCGTGATT................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
...............................................................................................TATCACAGTGGCTGTTTTTTTTA...................................................... 23 2 5 1.00 5 0 0 0 5 0
.................................................................................................TCACAGTTGCTGTTTCTTTTAGAA................................................... 24 1 2 1.00 2 2 0 0 0 0
...............................................................................................TATCACAGTGGCTGTTTCTTT........................................................ 21 1 2 1.00 2 0 0 0 2 0
...................................................TAAGGAAATATTAGCCGTGATT................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
....................................................................................................CAGTTGCTGTTTCTTTTAGATA.................................................. 22 0 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTAGCCTTGATA................................................................................................... 22 2 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTTAT.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
....................................................................................................CAGTTGCTGTTTCTTTTAG..................................................... 19 0 2 1.00 2 2 0 0 0 0
................................................................................................ATCACAGTTGCGGTTTCTTTTAG..................................................... 23 1 2 1.00 2 2 0 0 0 0
................................................................................................ATCACAGTTGCTGTTTCTTTTT...................................................... 22 1 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGATTTTAAT.............................................................................................. 27 0 2 1.00 2 1 0 1 0 0
..................................................CTAAGGAAATAGTAGCCGTTAT.................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
..................................................CTAAGGGAATAGTAGCCGTGAT.................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
...................................................TAGGGAAATAGTAGCCGTGATT................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
..................................................CTAAGGAAATAGAAGCCGTGA..................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTTCTTTTAT..................................................... 24 1 2 1.00 2 2 0 0 0 0
.......................................................GAAATAGTAGCCGTGATT................................................................................................... 18 0 2 1.00 2 2 0 0 0 0
..................................................CTAAAGAAATAGTAGCCGTGATT................................................................................................... 23 1 2 1.00 2 2 0 0 0 0
..................................................CTAAGGAAATATTAGCCGTGA..................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
..................................................................................................CACAGTTGCTGCTTCTTTTAGAT................................................... 23 1 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATACTAGCCGTGATT................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
.................................................................................................TCACAGTTGCTGTTTCTTT........................................................ 19 0 2 1.00 2 2 0 0 0 0
..................................................CTAAGGAAATACTAGCCGTGA..................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
....................................................AAGGAAATAGTAGCCGTGATC................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
..................................................................................................CACAGTTGCTTTTTCTTTTAGAT................................................... 23 1 2 1.00 2 2 0 0 0 0
..................................................................................................CACAGTTGCTGGTTCTTTTAGA.................................................... 22 1 2 1.00 2 2 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCTTT........................................................ 18 0 2 1.00 2 2 0 0 0 0
...................................................TAATGAAATAGTAGCCGTGAT.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTTCT.......................................................... 19 0 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTCATT................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
..................................................CTAACGAAATAGTAGCCGTGAT.................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
...................................................TAATGAAATAGTAGCCGTGATT................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGAAGCCGTGA..................................................................................................... 20 1 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGATTA.................................................................................................. 23 1 2 1.00 2 2 0 0 0 0
....................................................TATGAAATAGTAGCCGTGATT................................................................................................... 21 2 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTAGCCCTGAT.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
..............................................................................................TTATCACAGTTGCTGTTTCTTT........................................................ 22 1 2 1.00 2 2 0 0 0 0
.................................................TCTAAGGAAATAGTAGCCTTGA..................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
...................................................TAAGTAAATAGTAGCCGTGAT.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
..................................................................................................CACAGTTGCTGGTTCTTTTAGAT................................................... 23 1 2 1.00 2 2 0 0 0 0
..................................................................................................CACAGTTGCTGATTCTTTTAGAT................................................... 23 1 2 1.00 2 2 0 0 0 0
...................................................TAAGGGAATAGTAGCCGTGAT.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGATAA.................................................................................................. 24 2 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTACCCGTGAT.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
..................................................................................................CACAGTTGCTGGTTCTTTTAGATT.................................................. 24 2 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTAGCTGTGATT................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGTTT................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
....................................................AAGAAAATAGTAGCCGTGAT.................................................................................................... 20 1 2 1.00 2 2 0 0 0 0
...................................................AAAGGAAATAGTAGCCGTGAT.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
.................................................................................................GCACAGTTGCTGTTTCTTTTAGAT................................................... 24 1 2 1.00 2 2 0 0 0 0
..................................................ATAAGGAAATAGTAGCCGTGATT................................................................................................... 23 1 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATAGTGGCCGTGATT................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
...................................................TAAGAAAATAGTAGCCGTGATT................................................................................................... 22 1 2 1.00 2 2 0 0 0 0
................................................................................................ATCACAGTTGCTGTTTCTTTTAA..................................................... 23 1 2 1.00 2 2 0 0 0 0
...................................................TAAGGAAATATTAGCCGTGAT.................................................................................................... 21 1 2 1.00 2 2 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTGATTG.................................................................................................. 24 1 2 1.00 2 2 0 0 0 0
.................................................................................................TCACAGTTGCTGTTTCTTTTAGAT................................................... 24 0 2 1.00 2 2 0 0 0 0
.....................................................................................................AGTTGCTGTTTCTTTTAGATA.................................................. 21 0 2 1.00 2 2 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTCTTTTTAA..................................................... 24 3 5 0.60 3 0 0 0 3 0
...............................................................................................TATCACAGTTGCTGTTTCCTTT....................................................... 22 1 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATGGTAGCCGTGATC................................................................................................... 22 2 2 0.50 1 1 0 0 0 0
...................................................TGAGGAAATAGTAGCCGTGATT................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
...................................................................................................ACATTTGCTGTTTCTTTTAGATT.................................................. 23 2 2 0.50 1 1 0 0 0 0
....................................................AGGGAAATAGTAGCCGTGATT................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATGGTAGCCGTGATT................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
.....................................................AGGAAATAGTAGCCTTGAT.................................................................................................... 19 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGAGAT.................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
.................................................TCTAAGGAAATATTAGCCGTGA..................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
...................................................................................................ACAGTTGCTTTTTCTTTTAGAT................................................... 22 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGAAATAGTAGCCGTCATT................................................................................................... 23 1 2 0.50 1 1 0 0 0 0
....................................................AAGGAAATAGTAGCCGTGTT.................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
...................................................TAACGAAATAGTAGCCGTGAT.................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
.................................................TCTAAGGAAATAGTACCCGTGAT.................................................................................................... 23 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGAAATTGTAGCCGTGAT.................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
..............................................................................................TAATCACAGTTGCTGTTTCTTTTAG..................................................... 25 2 2 0.50 1 1 0 0 0 0
..................................................CTAGGGAAATAGTAGCCGTGA..................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
..................................................................................................CACAGTTGCTGATTCTTTTAGA.................................................... 22 1 2 0.50 1 1 0 0 0 0
.................................................................................................GCACAGTTGCTGTTTCTTTTAGA.................................................... 23 1 2 0.50 1 1 0 0 0 0
.....................................................AGGAAATAGTAGCCGTGATTTT................................................................................................. 22 0 2 0.50 1 1 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCGTTTAGAT................................................... 23 1 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTGT..................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGAAATTGTAGCCGGGAT.................................................................................................... 22 2 2 0.50 1 1 0 0 0 0
...............................................GCCCTAAGGAAATAGTAGCCGTGAT.................................................................................................... 25 3 2 0.50 1 1 0 0 0 0
...............................................TTTCTAAGGAAATAGTAGCCGTGA..................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGGAATAGTAGCCGTGATT................................................................................................... 23 1 2 0.50 1 1 0 0 0 0
..................................................................................................CACAGTTGCTGTGTCTTTTAGAT................................................... 23 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGAAATAGTAGCTGTGAT.................................................................................................... 22 1 2 0.50 1 0 0 1 0 0
....................................................AAGGAAATATTAGCCGTGAT.................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
...................................................TAAGGAGATAGTAGCCGTGA..................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
...................................................GAAGGAAATAGTAGCCGTGAT.................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
......................................................TAAAATAGTAGCCGTGATT................................................................................................... 19 2 2 0.50 1 1 0 0 0 0
....................................................AAGGAAATACTAGCCGTGAT.................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
..............................................................................................AACTCACAGTTGCTGTTTCTTTTAG..................................................... 25 2 2 0.50 1 1 0 0 0 0
................................................................................................ATCACAGTTGCGGTTTCTTTTAA..................................................... 23 2 2 0.50 1 1 0 0 0 0
....................................................AAGGAAATAGTAGCCTTGA..................................................................................................... 19 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGGAATAGTAGCCGTGATA................................................................................................... 23 2 2 0.50 1 1 0 0 0 0
.................................................................................................TCACAGTTGCTGTTTCTTTTAGT.................................................... 23 1 2 0.50 1 1 0 0 0 0
.............................................................................................GATATCACAGTTGCTGTTTCTTTT....................................................... 24 1 2 0.50 1 1 0 0 0 0
..................................................................................................CACAGTTTCTGTTTCTTTTAGAT................................................... 23 1 2 0.50 1 1 0 0 0 0
...............................................................................................TATCACAGTTGCCGTTTCTTTT....................................................... 22 1 2 0.50 1 1 0 0 0 0
...................................................TAAGGAATTAGTAGCCGTGATT................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGAAATAGTAGCCCTGAC.................................................................................................... 22 2 2 0.50 1 0 1 0 0 0
..................................................................................................CACAGATGCTGTTTCTTTTAGAT................................................... 23 1 2 0.50 1 0 0 0 0 1
................................................................................................ATCGCAGTTGCTGTTTCTTTTAG..................................................... 23 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGAAATAATAGCCGTGAC.................................................................................................... 22 2 2 0.50 1 1 0 0 0 0
....................................................AAGGAAATAGTAGCCGTCATT................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGAAATACAAGCCGTGAT.................................................................................................... 22 2 2 0.50 1 1 0 0 0 0
..................................................CTAAGGAAATAGTAGTCGTGAT.................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGAAAATAATAGCCGTGAT.................................................................................................... 22 2 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATAGTAGCGGTGATT................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATAGTACCCGTGATT................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
..................................................CTAAAGAAATAGTAGCCGTGAT.................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCCTTTAGA.................................................... 22 1 2 0.50 1 1 0 0 0 0
.................................................TCTAAGGAAATAGTAGCCGTGAG.................................................................................................... 23 1 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATATTAGCCGTGAC.................................................................................................... 21 2 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTATT.................................................................................................... 21 2 2 0.50 1 1 0 0 0 0
.............................................................................................ATTATCACAGTTGCTGTTTCTTTT....................................................... 24 2 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATAGTAGCCGT....................................................................................................... 18 0 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATAGTATCCGTGA..................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTAAAT................................................... 23 1 2 0.50 1 1 0 0 0 0
...................................................TATGGAAATAGTAGCCGTGATT................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATAGTAGCAGTGATG................................................................................................... 22 2 2 0.50 1 1 0 0 0 0
..................................................................................................CACAGTTGCTGTTTCTTTTACA.................................................... 22 1 2 0.50 1 1 0 0 0 0
...................................................CTAGGAAATAGTAGCCGTGAT.................................................................................................... 21 2 2 0.50 1 1 0 0 0 0
..............................................................................................GTATCACAGTTGCTGTTTCTTTT....................................................... 23 1 2 0.50 1 1 0 0 0 0
..................................................CTAAGGAAATAGTAGACGTGA..................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
.................................................................................................TCACAGTTGCTCTTTCTTTTAG..................................................... 22 1 2 0.50 1 1 0 0 0 0
....................................................AAGGAAATAGTAGCGGTGAT.................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTCCTTT........................................................ 21 1 2 0.50 1 0 0 0 1 0
................................................ATCTAAGGAAATAGTAGCCGTGA..................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
..................................................CAAAGGAAATAGTAGCCGTGAT.................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTTCTTTC....................................................... 22 1 2 0.50 1 1 0 0 0 0
...............................................................................................TATCACAGTCGCTGTTTCTTTT....................................................... 22 1 2 0.50 1 1 0 0 0 0
.................................................TCTAAGGAAATAGTGGCCGTGA..................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
...................................................TAAGGAAATAGTAGCCGTTA..................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
.................................................................................................TCACAGTTGCTGTTTCTTTTAA..................................................... 22 1 2 0.50 1 1 0 0 0 0
..................................................................................................CACAGTTACTGTTTCTTTTAGA.................................................... 22 1 2 0.50 1 1 0 0 0 0
.................................................TCTAAGGAAATAGCAGCCGTGA..................................................................................................... 22 1 2 0.50 1 0 0 1 0 0
...................................................TAAGGAAATAGTAGCAGTGATT................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
................................................................................................CTCACAGTTGCTGTTTCTTTTAGA.................................................... 24 1 2 0.50 1 1 0 0 0 0
....................................................AAGGAAATAGTGGCCGTGACT................................................................................................... 21 2 2 0.50 1 1 0 0 0 0
...................................................TATGGAAATAGTAGCCGTGAT.................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
.....................................................CGGAAATAGTAGCCGTGAT.................................................................................................... 19 1 2 0.50 1 1 0 0 0 0
..................................................................................................CACATTTGCTGTTTCTTTTAGAT................................................... 23 1 2 0.50 1 1 0 0 0 0
...............................................................................................TATCACAGTTGCTGTTTCTTTTAA..................................................... 24 1 2 0.50 1 1 0 0 0 0
...................................................TAAGGGAATAGTAGCCGTGA..................................................................................................... 20 1 2 0.50 1 1 0 0 0 0

Anti-sense strand reads

GTTGACTCGGTGTAGTAGTAGAAGCGGCTGTACTTAAATATAGCTCAATAGATTCCTTTATCATCGGCACTAAAATTAATAAGTTTAGAAACTGTATAGTGTCAACGACAAAGAAAATCTATCGAGAAAACATTCGTCGGATTTCACGGGCTCACGGACTCACTTAAAACTT
************************************.(((((..(((((((((((((((((((((((.(((((.((((............))))...))))).))))))))))).))))))))))))...)))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
................................................................................................TAGTGTCAACGACAAAGAAAAT...................................................... 22 0 2 0.50 1 1
...........GTAGTAGTGGAAGAGGCTATA............................................................................................................................................ 21 3 12 0.08 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004921:470-641 + dwi_69 CAACTG-------------AGCCA-CATCATC--AT-----C--------TTCG----C-------------CGACATGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTAATTAT-----T-----------------CAAATCTTTGACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAA-A-----GT------GCCC---------GAGTGCC-TGAGTGAATT------TT----GAA
droVir3 scaffold_13047:1194145-1194305 + dvi-mir-994 CAAAAA-------------GTCTA-CG----TT-CCA---------------------GC-GATTTT------------GATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACAT-------T-----------------AGAAGCTTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAACAGACGGT---------TC---------GGGGAG-CAGT-------TTGAGA--------A
droMoj3 scaffold_6540:5225139-5225317 + dmo_60 GATCCGAGTGATGCAATAGGTCTAACG----TT-GAA---------------------G-------------CGATATCAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACAT-------T-----------------TCAACCTATTACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAACAGT----C------GGTC---------GCGTTG-CGGTT------TTGAACTT----GAG
droGri2 scaffold_14906:5076875-5077048 - GCCTGC-------------AGATA-TT----CG-CGA---------------------AT-AATGTC------------AACCTTCTTCTCGGAGCGATCTACAACATA------ATA-----------TACAAATTCAATGAG-----T-----------------CCAACTTTTTATGCATTGTCGTCG----CGTACGCACTTGTTTTCATCATGTAGCCCAGCGTATTCTCATCTATGGGGAAGTAGCCAAC-G-----GT------GGCT---------------------------CCGTAC--------T
dp5 2:7230929-7231101 - GCCTTC-------------AGATA-CT----CC-CGA---------------------AT-GATGTC------------GATCTTCTTCTCCGATCGATCTGTAATTTAT--AGG---GAAACATAAGCTAAAATGCA------ATCGATATA--------------GGAATCCT-------------------CTTTACGTACTTGTTTGCTTCATGTAGCCCAAGGTATTTTCATCGATGGGGAAGTAGCCAAC-G-----GT------GGCT---------------------------CCATAC--------T
droPer2 scaffold_0:1091563-1091735 - GCCTTC-------------AGATA-CT----CC-CGA---------------------AT-GATGTC------------GATCTTCTTCTCCGATCGATCTGTAATTTAT--AGG---GAAACATAAGCCAAAACGCA------ATCGAT----A----------TAGAAATCTT-------------------CTTTACGCACTTGTTTGCTTCATGTAGCCCAAGGTATTTTCATCGATGGGGAAGTAGCCAAC-G-----GT------GGCT---------------------------CCATAC--------T
droAna3 scaffold_13340:860215-860387 - GCCTTA-------------AGATA-CT----CC-CGA---------------------AT-AATATC------------TATTTTCTTCTCCGAGCGATCTTTAGAGGAT-----TA----CCATGAAA----GTAAG----------AATTG---------TTAAGGAAATTTA-G------AACTG-TG----CAAGCTTACTTGACTGCCTCATGTAGTCCAAGGTATTCTCGTCGACGGGGAAGAACGCCAC-A-----GT------GGCT---------------------------CCGTAC--------T
droBip1 scf7180000394085:131770-131917 + AGGAAA----------------------------------------------------------C------------CAGATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-------A-----------------GAAGTCTTTCCCATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAG-A-----TTC--------CCATAAC-TCGAGTGCCCAGTG-------TTGAA--------A
droKik1 scf7180000302475:1425691-1425878 + GAACAGTGTGA--------AG--------------------------AAAAGTGCCTCGG-AGTCTCGATCGCGTCCTGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-T-----C-----------------AGAATCTTTCCCATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAG-A-----TCTGAA---ACCGAGT-----------CAAGTGTTAGTC------CTAGAAGGA
droFic1 scf7180000453800:2313470-2313657 + CAGTGG-------------AACTC-AT--------------TTGTGCAGCATTGAATCGG-AAACCCGAACGCGTCCTGTATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-------A-----------------AGATTATTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAG-A-----TTCGAG---TGTGAATAT-CTGTTTGATT-----------------T----GAA
droEle1 scf7180000490995:505802-505977 - GCCTTC-------------AGATA-CT----GA-CGA---------------------AT-GATGTC------------GATCTTCTTCTCCGAGCGATCTGGAATGGGT--TTT---AAAATGTAATCTAAAT----------ACTGATATATGCGGACTATGA---------------------AG-----TTGTTCCTCACTGGTCTGCTTCATGTAGCCAAGAGTGTTCTCGTCAATGGGGAAATATCCCAC-G-----GT------GGCT---------------------------CCGTAT--------T
droRho1 scf7180000777285:67384-67554 - GCCTTT-------------AAATA-CT----GG-CGG---------------------AT-GATGTC------------GATCTTCTTCTCGGAGCGATCTGTCAA-CCAGA---ATCCATTTATAGACAAAAT----------AATAGCTATTT--------------A-------------AATAG-A----ATAAACCCACTGGTCTGCCGCATGTAATTCAGTGTGTTCTCATCGATGGGAAAGTAGCCCAC-A-----GT------GGCT---------------------------CCATAT--------T
droBia1 scf7180000302402:8322767-8322946 + TTGCAA-------------TGCCG------------------------------CCTCGG-AACTTGGATCGCGTCCTGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-------A-----------------TGCATTTTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAG-A-----TC------GTCCGAGTGTCTTGAGTGCCTTGAGTGAATC------CT----G--
droTak1 scf7180000415380:1396590-1396761 - GCCTTC-------------AAATA-CT----CC-CGA---------------------AT-GATGGA------------AATCTTCTTCTCCGAGCGATCTTAAAAAAAT-----AA----ATATAAGATATTATACA----------AATTA---------AGATAATAATTTA------------G-----AGGTAACTCACTTGACAGCTTTAGGTAGCTGAGGGTATTCTCGTCAATGGGGAAATAGCCAAT-A-----GT------GGCT---------------------------CCGTAT--------T
droEug1 scf7180000409692:710033-710222 + CCATTG-------------TGCAA-C------------------------TTCGCCTCGG-AACTTTGAACGCGTCCTGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCT-------T-----------------AGAATTTTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTTG-A-----TCCTAGACTTCCGAATAT-TTAAGTGCCTTGAATGAATT------CT----G--
dm3 chr3R:6233793-6234001 + dme-mir-994 CAGTTA-------------AAATC-AT----AC-ATAATTGTTGACCACAATTGCCTCGGGAACTTCGATCGCGTCCTGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-------A-----------------AGAATTTTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAACAGCCTAG-A-----TCCGAA---TGCGAGTAT-CCGAGTGCCTTGCGTGAATC------CT----GGA
droSim2 3r:14840278-14840451 - GCCTTT-------------AGATA-CT----GG-CGA---------------------AT-GATGTC------------GATCTTCTTTTCAGAGCGATCTAAAAAGTTT-----GTTATGATATAAGTAAAAT----------ATTGTTTTATG--------------A-------------AACAG-TGTGATTTCCCGTACTTGTCTGCTTCATGTAACCAAGAGTATTCTCATCGATGGGGAAGTATCCCAC-G-----GT------GGCT---------------------------CCGTAT--------T
droSec2 scaffold_0:15706855-15707028 - GCCTTT-------------AGATA-CT----GG-CGA---------------------AT-GATGTC------------GATCTTCTTTTCAGAGCGATCTAAAATGTTT--GTT---ATGATATAAGTAAAAT----------ATTGTTTTATG--------------A-------------AACAG-TTTGATTTTCCGTACTTGTCTGCTTCATGTAACCAAGAGTATTCTCATCGATGGGGAAGTATCCCAC-G-----GT------GGCT---------------------------CCGTAT--------T
droYak3 3R:10262308-10262516 + dya_45 CAGTTA-------------AGATC-AT----AAAATATTTGATGGCCACAATTGCCTCGG-AACTTCGATCGCGTCCTGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-------A-----------------AGAATTTTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAG-T-----TCCGAA---TGCGAATAT-CCGAGTGCCTAGCGTGTATC------CT----GGA
droEre2 scaffold_4820:9524278-9524450 - GCCTTT-------------AAATA-CT----GC-CGG---------------------AT-AATATC------------GATTTTCTTCTCGGAGCGATCTAAGGAACCA-----ATCCATGGATATCTAGTAT-TCA----------ATTTAAT--------------A-------------AATGT-TTTAGATTAACTCACTGGTTTGGCGCATGTAACTCAGGGTGTTTTCATCGATTGGGAAGTAGCCCAC-A-----GT------GGCT---------------------------CCATAT--------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CAACTG-------------AGCCA-CATCATC--AT-----C--------TTCG----C-------------CGACATGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTAATTAT-----T-----------------CAAATCTTTGACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAA-A-----GT------GCCC---------GAGTGCC-TGAGTGAATT------TT----GAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................2224428.008856106865285112
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................2122529.0050586949404720
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................2221353.5027073926472100
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................212501.50100329861500
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................232335.506710664232
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................202307.0061406021020
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................232268.005362531210
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................222243.504870487000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................222217.504355423700
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................202217.504350435000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................232186.503730373000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................222153.5030732268700
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................212135.502710271000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTT......................................................................................................22297.001940193100
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................23289.501790179000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTT.......................................................................................................21280.001600159100
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................22277.001540153100
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAG....................................................................................................21248.5097097000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATT.................................................................................................24242.0084084000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................23241.0082082000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................20238.0076073201
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................22228.5057057000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTT......................................................................................................21226.5053052100
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................21226.0052448000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................19224.5049049000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................22223.5047047000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATC.....................................................................................................................................................................................23221.5043142000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................21219.5039039000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................23218.5037036100
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................22217.5035035000
......................................................................................................AGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................19217.5035035000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................23215.5031130000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................21212.5025025000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................19211.0022021100
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATC.....................................................................................................................................................................................22210.5021219000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................23210.0020020000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................2429.0018018000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTT........................................................................................................2029.0018018000
......................................................................................................AGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................2028.5017017000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGAC..................................................................................................2328.001688000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................2228.0016015100
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTT.......................................................................................................2027.5015015000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATA.................................................................................................2427.5015015000
.......................................................................................................GGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................1827.0014014000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAG....................................................................................................2026.5013013000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTA.....................................................................................................2026.0012012000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................2125.5011011000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGACA.....................................................................................................................................................................................2325.5011011000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGATT.................................................................................................2325.0010010000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................2125.0010010000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATG.....................................................................................................................................................................................2325.0010010000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................2424.50909000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGATA.................................................................................................2324.00808000
...........................................................................................................................................................................................GTTGC-------------TGTTTCTTTTAGAT..................................................................................................1924.00808000
......................................................................................................AGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................1824.00808000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATG.....................................................................................................................................................................................2224.00808000
...................................................................................................CTAAGGAAATA-----GTA---------GCCG..........................................................................................................................................................................................1823.50716000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGACC.....................................................................................................................................................................................2323.50725000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................2123.00606000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATC.................................................................................................2423.00606000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGT.........................................................................................................................................................................................1923.00606000
.......................................................................................................GGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................1922.50505000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................2222.50505000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTT......................................................................................................2022.50505000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGAA..................................................................................................2322.00404000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................2322.00404000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................2422.00404000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTT......................................................................................................1922.00404000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTG....................................................................................................................................................................................2322.00403100
..........................................................................................................................................................................................AGTTGC-------------TGTTTCTTTTAGAT..................................................................................................2022.00404000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................2021.50303000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGT.......................................................................................................................................................................................2221.50303000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATG.................................................................................................2421.50303000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGG.......................................................................................................................................................................................2121.50330000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAGA...................................................................................................2021.50303000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................2521.50303000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGG.......................................................................................................................................................................................2221.50330000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................2121.50303000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTTT...................................................................................................................................................................................2421.00202000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGG.......................................................................................................................................................................................2021.00220000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGAG..................................................................................................2321.00202000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................2421.00202000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGAA..................................................................................................2421.00202000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAGATA.................................................................................................2221.00202000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAG....................................................................................................1921.00202000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTT.....................................................................................................2221.00202000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTTTAAT................................................................................................................................................................................2721.00201100
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAT....................................................................................................2421.00202000
........................................................................................................GAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................1821.00202000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTT.......................................................................................................1921.00202000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATC.....................................................................................................................................................................................2121.00202000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTT.......................................................................................................1821.00202000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCT.........................................................................................................1921.00202000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTA....................................................................................................................................................................................2321.00202000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATAA....................................................................................................................................................................................2421.00202000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAA....................................................................................................2321.00202000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATTG....................................................................................................................................................................................2421.00202000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................2421.00202000
..........................................................................................................................................................................................AGTTGC-------------TGTTTCTTTTAGATA.................................................................................................2121.00202000
......................................................................................................AGGAAATA-----GTA---------GCCGTGATTTT...................................................................................................................................................................................2220.50101000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGT.......................................................................................................................................................................................2020.50101000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGT...................................................................................................2320.50101000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAG......................................................................................................................................................................................2320.50101000
....................................................................................................TAAGGAAATA-----GTA---------GCCGT.........................................................................................................................................................................................1820.50101000
.................................................................................................ATCTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................2320.50101000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTC......................................................................................................2220.50101000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAA....................................................................................................2220.50101000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAA....................................................................................................2420.50101000
droVir3
CAAAAA-------------GTCTA-CG----TT-CCA---------------------GC-GATTTT------------GATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACAT-------T-----------------AGAAGCTTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAACAGACGGT---------TC---------GGGGAG-CAGT-------TTGAGA--------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................221297871.0029787111479740121693012723969175662883304271235112074204220125742841619858687718520316546740222213916252871941400100010000000000020611213817
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................211143088.00143088043528065941821165037102551641812122060150411270197533154271029829531387679745424261323015171537318800000000000000000900070540
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................22190929.00909291629260462512583972686901452934169030903769014490784276128155602243848254787720111422247250000010000000000002190060221
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................20138099.00380990082801565515061173127421040000107173902177833432312684696643231424493341124240000000000000000016002071
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................22137995.00379950193301622546473213200132152232010401334041731297521655602953417319541132341190190000000000000000070020140
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................21134121.0034121021241010692632461121264123512101000629001598297527388149866714726333513482617000000000000000009017056
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................23124404.002440400344085336196614731613002000000170063621011537678375501420321140111131100000000000000000020000310
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................23112867.001286700519048311105549702535151010005800508111084931882967311228100251380000000000000000047000057
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTT......................................................................................................22110487.0010487001670418181171015801610110000009005051095869225928477312416211156360000000000000000020020197
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................2214522.0045220015401931140111341140001000000200239562575833104910011220111974000000000000000000010015
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTT.......................................................................................................2113328.0033280095011344100410500000000006001943713716517191101231300288100000000000000000101000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................2312832.002832007109141330760930000000001006529525682676620000000111031000000000000000000000047
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................2312014.00201400330553580601300000000000068248155593727220001000146300000000000000000000000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................2311883.0018830049066018308003201000010010088193112417603100000100046100000000000000000000008
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................2011836.0018360058086531122120109000000100200143131106276305000105000080200000000000000000000100
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................2111706.001706004106133212255015000000000160093137113183262100004002070000000000000000000000100
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAG....................................................................................................2111588.00158800910914203018010010000000000100138146366329200111000081200000000000000000000102
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................2311582.001582002520130240100300000000000015133141392572110000000090000000000000000002000014
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................2211522.00152200228091180201000000000000477116340695100000000061000000000000000001000022
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATC.....................................................................................................................................................................................2311438.0014380036084018201615730001000110032686318119702020500003830000000000000000010000464
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................2311377.0013770012103605206503901000000100025991124193642000001000281000000000000000001000010
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................2211299.0012990060058371012828201000000020069126118216321010000000039000000000000000000000002
....................................................................................................TAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................1911183.0011830024090521711860980000000003001035954111178000000001151000000000000000000100000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................241942.0094200250522320440340000000000003910862232250101101000054000000000000000000000004
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................221933.0093300210440130062070000000000000376926188253000010000031000000000000000000000001
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................231832.008320026039074050039000000000100287455177175000001000091100000000000000000100000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATT.................................................................................................241690.006900020015022040600000000000013513120214000000020001210000000000000000010000170
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................221677.0067700390140380606000000000000946351752520000010100130000000000000000000000042
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGATT.................................................................................................231655.0065500140133370704000000000000136338229212000000000060000000000000000000000016
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATC.....................................................................................................................................................................................221590.005900016036454015250000000100100253332646900040000001830000000000000000020000161
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................241546.00546002308126051037000000000000115323143142000000000026000000000000000000000002
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................221519.00519001006211050100000000000066075146174100000000022000000000000000000000000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................201498.004980033905011020300000000000021911485400000000002000000000000000000000002
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTT........................................................................................................201490.00490001909037050700000000000036495382720000000000400000000000000000000000081
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTT......................................................................................................211432.004320027091300904000000000000124751114770000011000320000000000000000000000017
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................211426.00426001201402001000000000000001661918498010010100026000000000000000000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGT.........................................................................................................................................................................................191424.0042400504619615030000000004006540196945000001100014000000000000000000000009
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................211327.003270027003010207000000000000062181700000000001000000000000000000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGT.........................................................................................................................................................................................181312.003120030380750100000000000000672714463300000010005000000000000000000000002
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTT......................................................................................................201300.0030000240702602020000000000002629474528000001000063000000000000000000000000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGC.......................................................................................................................................................................................221268.00268000034114805021000000000100293131000000000020100000000000000000000000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATC.................................................................................................241240.0024000104010000000000000000000460000000000000000000000000000000000224
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................211233.0023300150401201301200000000000061827606300000000003000000000000000000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGC.......................................................................................................................................................................................201222.0022200004137903017000000000200501110000002000020000000000000000000000002
...................................................................................................CTAAGGAAATA-----GTA---------GCCG..........................................................................................................................................................................................181208.0020801001403705050000000000002019142650100000000010000000000000000000600000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................221200.002000080501901501200000000000031284258000000000040000000000000000000000014
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGATA.................................................................................................231190.00190004010300000000000000000188866800000000001000000000000000000100000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................231175.00175001105013060300000000000061914435000000000005000000000000000000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................221166.001660012050130906000000000000917203330000000000012000000000000000000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATG.....................................................................................................................................................................................231159.001590090201601901400000000000010913382800000000001000000000000000000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGC.......................................................................................................................................................................................211151.001510000160600606000000000100323167000000000013000000000000000000000000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTA.....................................................................................................201136.0013600404012000000000000010062014481600001000008000000000000000000000002
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................211121.001210010611301206000000000100111311182000000010007000000000000000000000000
..................................................................................................TCTAAGGAAATA-----GTA---------GCC...........................................................................................................................................................................................181119.001190010416708050000000000006734800000000005000000000000000000000000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAG....................................................................................................201117.001170060301501050000000000005106352500000000005100000000000000000000000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................211116.00116003100000000000000000000087195100000000000000000000000000000000000
...........................................................................................................................................................................................GTTGC-------------TGTTTCTTTTAGAT..................................................................................................191113.0011300106016020300000000000061152913000000000020000000000000000000000019
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAA....................................................................................................241108.001080000103000000000000000011310473200000000001000000000000000000000000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................191107.001070087010500000000000001002404300000000000000000000000000000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATAA....................................................................................................................................................................................241107.001070013020401000000000010003119371810000000006000000000000000000000100
.......................................................................................................................................TTTACAT-------T-----------------AGAAGCTTTCACATAT......................................................................................................................................24195.0095009051200000000000000000971730000000000014000000000000000000000001
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCT.........................................................................................................19190.009000100701400010000000000006761213010000000013000000000000000000000000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................21187.008700501010000000000000000153263900000000002000000000000000000000004
......................................................................................................AGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................19185.0085003004070001000000100000481101700100100000000000000000000000000000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTT......................................................................................................19185.008500100211300000010000000008181511000000000015000000000000000000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAT....................................................................................................22181.008100005060140800000000010038100100000000007000000000000000000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATG.....................................................................................................................................................................................22180.00800070508013090000000000008597400000300002000000000000000000000000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................24178.007800000010100000000000000156174600000000001000000000000000000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................24173.0073001010100010000000000003321312000000000000000000000000000000000036
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATTT................................................................................................25172.0072003020401000000000000002510201300000000007000000000000000000000005
..........................................................................................................................................................................................AGTTGC-------------TGTTTCTTTTAGAT..................................................................................................20171.007100201190403000000000000053810000000000020000000000000000000000023
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGT.......................................................................................................................................................................................22170.007000005012070300000000000072591500000000003100000000000000000000001
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATA.................................................................................................24168.006800201010000000000000000015322300000000000000000000000000000000003
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTT......................................................................................................18167.006700002022000200000000000069261100000000015000000000000000000000001
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAT....................................................................................................23165.0065000030701302200000000010011001000000200005000000000000000000000000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................25165.006500201010000000000000000176222500000000000000000000000000000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTC....................................................................................................................................................................................23163.006300104090204000000000000135151610000000101000000000000000000000000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGT.........................................................................................................................................................................................20162.00620030202200030000000000004529800000000004000000000000000000000000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAT....................................................................................................24159.0059000010501001300000000000010206700000000005000000000000000000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAG......................................................................................................................................................................................22154.00540020401108040000000001009503300000000004000000000000000000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTTT...................................................................................................................................................................................24152.005200302010110500000000000022537000000000011000000000000000000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGT.......................................................................................................................................................................................21144.0044001040905030000000001002414800000000002000000000000000000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTA....................................................................................................................................................................................23143.00430010403030000000000000015612600000000002000000000000000000000000
........................................................................................................GAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................18140.00400030301106010000000000005113300000010002000000000000000000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGT.......................................................................................................................................................................................20140.0040002040706020000000000000436500000000001000000000000000000000000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTT.....................................................................................................23140.0040003030601010000000000000867400000000001000000000000000000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATTTT...................................................................................................................................................................................25139.0039001010708000000000000000329500000000003000000000000000000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGT...................................................................................................23136.00360020305020400000000000002261000000000000000000000000000000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATAA....................................................................................................................................................................................23134.00340000000000000000000000007910400000000003000000000000000000000001
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTA.....................................................................................................19134.00340010201100000000000000000038600000000003000000000000000000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGG.......................................................................................................................................................................................20132.00320000114012020000000000001200300000000002000000000000000000400000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGG.......................................................................................................................................................................................21132.0032011020506030010000000003301200000000004000000000000000000000000
...........................................................................................................................................................................................GTTGC-------------TGTTTCTTTTAGA...................................................................................................18131.00310000002010100000000000015410300000000002000000000000000000000002
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGG.......................................................................................................................................................................................22131.0031000030706060000000000002021300000000001000000000000000000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATAAA...................................................................................................................................................................................25129.00290040001010000000000000003410400000000001000000000000000000100000
......................................................................................................AGGAAATA-----GTA---------GCCGTGATTTA...................................................................................................................................................................................22129.00290000101000000000000000001081800000000000000000000000000000000000
......................................................................................................AGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................20129.00290020000001000000000000000222200000000000000000000000000000000000
droMoj3
GATCCGAGTGATGCAATAGGTCTAACG----TT-GAA---------------------G-------------CGATATCAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACAT-------T-----------------TCAACCTATTACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAACAGT----C------GGTC---------GCGTTG-CGGTT------TTGAACTT----GAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................22118490.00184901814923210324
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................2116851.0068516761011088
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................2216389.00638962580143123
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................2113271.0032713210002059
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................2012000.0020001954101044
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................2211694.0016941634002058
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................2311203.0012031184000019
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................201552.0055255200000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................211546.0054654600000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................231447.00447433200111
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................231441.0044144001000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................221407.0040740700000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTT......................................................................................................221354.0035435100003
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................221318.0031831400004
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................231187.0018718700000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................231179.0017917710001
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................191164.0016416400000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAG....................................................................................................211159.0015915701001
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................201145.0014514300002
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTT.......................................................................................................211141.0014113800003
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................221108.0010810600002
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTT......................................................................................................21171.00717000001
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................22166.00666600000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................21163.00636300000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................22162.00626000011
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................21161.00615700004
....................................................................................................TAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................19158.00585601001
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................24156.00565300003
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................23152.00525200000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................23146.00464400002
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTT........................................................................................................20145.00454300002
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTT......................................................................................................20137.00373601000
......................................................................................................AGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................19136.00363600000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................22134.00343310000
......................................................................................................AGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................20134.00343400000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................22130.00303000000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................23129.00292900000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................21126.00262600000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................24125.00252500000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGATT.................................................................................................23124.00242300001
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATG.....................................................................................................................................................................................23120.00201900001
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATC.....................................................................................................................................................................................23120.00201800002
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTT.......................................................................................................20119.00191900000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................22118.00181800000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATT.................................................................................................24116.00161600000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAG....................................................................................................20116.00161600000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGATA.................................................................................................23115.00151500000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGT.......................................................................................................................................................................................21115.00151400001
......................................................................................................AGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................18114.00141400000
.......................................................................................................GGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................18112.00121200000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................21112.00121200000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................21112.00121200000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTT......................................................................................................19112.00121200000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGT.........................................................................................................................................................................................19111.00111100000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATAA....................................................................................................................................................................................24110.00101000000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................2318.008700001
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGAA..................................................................................................2418.008800000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................2118.008800000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATG.....................................................................................................................................................................................2217.007700000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................2417.007700000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATC.....................................................................................................................................................................................2216.006400101
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGT...................................................................................................2216.006600000
....................................................................................................TAAGGAAATA-----GTA---------GCCGT.........................................................................................................................................................................................1816.006600000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCT.........................................................................................................1916.006600000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTG....................................................................................................................................................................................2316.006600000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTT.......................................................................................................1916.006600000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTA.....................................................................................................2016.006600000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................2415.005500000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAGA...................................................................................................2015.005500000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAA....................................................................................................2415.005500000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATGG....................................................................................................................................................................................2415.005500000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAG....................................................................................................1914.004400000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATGG....................................................................................................................................................................................2314.004400000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................2414.004400000
.......................................................................................................................................TTTACAT-------T-----------------TCAACCTATTACATAT......................................................................................................................................2414.004400000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTC....................................................................................................................................................................................2314.004400000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTA....................................................................................................................................................................................2314.004400000
.......................................................................................................................................TTTACAT-------T-----------------TCAACCTATTACAT........................................................................................................................................2213.003300000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCT.........................................................................................................1813.003300000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGT...................................................................................................2313.003300000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGT.........................................................................................................................................................................................2013.003200001
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAG......................................................................................................................................................................................2213.003300000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTGG...................................................................................................................................................................................2413.003300000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................2513.003300000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATGGC...................................................................................................................................................................................2513.003300000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................1813.003300000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATTG....................................................................................................................................................................................2413.003300000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAG......................................................................................................................................................................................2113.003300000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGACA.....................................................................................................................................................................................2313.003300000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................2113.003300000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAAA.....................................................................................................................................................................................2213.003300000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAGT...................................................................................................2413.003300000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGAA..................................................................................................2312.002200000
........................................................................................................GAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................1812.002200000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................2012.002200000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTTT.......................................................................................................................................................................................2112.002200000
...................................................................................................CTAAGGAAATA-----GTA---------GCCG..........................................................................................................................................................................................1812.002200000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGG.......................................................................................................................................................................................2012.002200000
..........................................................................................................................................................................................AGTTGC-------------TGTTTCTTTTAGAT..................................................................................................2012.002200000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGT.......................................................................................................................................................................................2012.002200000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATA.................................................................................................2412.002200000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGG...................................................................................................2212.002200000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................2312.002200000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTA.....................................................................................................1912.002200000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAGATA.................................................................................................2212.002200000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATTC....................................................................................................................................................................................2412.002000002
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGG.......................................................................................................................................................................................2112.002200000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATG.....................................................................................................................................................................................2112.002200000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTC......................................................................................................2011.001100000
...........................................................................................................................................................................................GTTGC-------------TGTTTCTTTTAGA...................................................................................................1811.001100000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTTT...................................................................................................................................................................................2411.001100000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAGA.....................................................................................................................................................................................2211.001100000
.......................................................................................................................................TTTACAT-------T-----------------TCAACCTATTACATATC.....................................................................................................................................2511.001100000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGACG.....................................................................................................................................................................................2311.001100000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTTC...................................................................................................................................................................................2411.001000001
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTT.......................................................................................................1811.001100000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGACA.....................................................................................................................................................................................2211.001100000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATTA....................................................................................................................................................................................2411.001100000
droGri2
GCCTGC-------------AGATA-TT----CG-CGA---------------------AT-AATGTC------------AACCTTCTTCTCGGAGCGATCTACAACATA------ATA-----------TACAAATTCAATGAG-----T-----------------CCAACTTTTTATGCATTGTCGTCG----CGTACGCACTTGTTTTCATCATGTAGCCCAGCGTATTCTCATCTATGGGGAAGTAGCCAAC-G-----GT------GGCT---------------------------CCGTAC--------TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
GCCTTC-------------AGATA-CT----CC-CGA---------------------AT-GATGTC------------GATCTTCTTCTCCGATCGATCTGTAATTTAT--AGG---GAAACATAAGCTAAAATGCA------ATCGATATA--------------GGAATCCT-------------------CTTTACGTACTTGTTTGCTTCATGTAGCCCAAGGTATTTTCATCGATGGGGAAGTAGCCAAC-G-----GT------GGCT---------------------------CCATAC--------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GCCTTC-------------AGATA-CT----CC-CGA---------------------AT-GATGTC------------GATCTTCTTCTCCGATCGATCTGTAATTTAT--AGG---GAAACATAAGCCAAAACGCA------ATCGAT----A----------TAGAAATCTT-------------------CTTTACGCACTTGTTTGCTTCATGTAGCCCAAGGTATTTTCATCGATGGGGAAGTAGCCAAC-G-----GT------GGCT---------------------------CCATAC--------TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
GCCTTA-------------AGATA-CT----CC-CGA---------------------AT-AATATC------------TATTTTCTTCTCCGAGCGATCTTTAGAGGAT-----TA----CCATGAAA----GTAAG----------AATTG---------TTAAGGAAATTTA-G------AACTG-TG----CAAGCTTACTTGACTGCCTCATGTAGTCCAAGGTATTCTCGTCGACGGGGAAGAACGCCAC-A-----GT------GGCT---------------------------CCGTAC--------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AGGAAA----------------------------------------------------------C------------CAGATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-------A-----------------GAAGTCTTTCCCATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAG-A-----TTC--------CCATAAC-TCGAGTGCCCAGTG-------TTGAA--------ASizeHit CountTotal NormTotal
No Reads
droKik1
GAACAGTGTGA--------AG--------------------------AAAAGTGCCTCGG-AGTCTCGATCGCGTCCTGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-T-----C-----------------AGAATCTTTCCCATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAG-A-----TCTGAA---ACCGAGT-----------CAAGTGTTAGTC------CTAGAAGGASizeHit CountTotal NormTotal
No Reads
droFic1
CAGTGG-------------AACTC-AT--------------TTGTGCAGCATTGAATCGG-AAACCCGAACGCGTCCTGTATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-------A-----------------AGATTATTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAG-A-----TTCGAG---TGTGAATAT-CTGTTTGATT-----------------T----GAASizeHit CountTotal NormTotal
No Reads
droEle1
GCCTTC-------------AGATA-CT----GA-CGA---------------------AT-GATGTC------------GATCTTCTTCTCCGAGCGATCTGGAATGGGT--TTT---AAAATGTAATCTAAAT----------ACTGATATATGCGGACTATGA---------------------AG-----TTGTTCCTCACTGGTCTGCTTCATGTAGCCAAGAGTGTTCTCGTCAATGGGGAAATATCCCAC-G-----GT------GGCT---------------------------CCGTAT--------TSizeHit CountTotal NormTotal
No Reads
droRho1
GCCTTT-------------AAATA-CT----GG-CGG---------------------AT-GATGTC------------GATCTTCTTCTCGGAGCGATCTGTCAA-CCAGA---ATCCATTTATAGACAAAAT----------AATAGCTATTT--------------A-------------AATAG-A----ATAAACCCACTGGTCTGCCGCATGTAATTCAGTGTGTTCTCATCGATGGGAAAGTAGCCCAC-A-----GT------GGCT---------------------------CCATAT--------TSizeHit CountTotal NormTotal
No Reads
droBia1
TTGCAA-------------TGCCG------------------------------CCTCGG-AACTTGGATCGCGTCCTGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-------A-----------------TGCATTTTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAG-A-----TC------GTCCGAGTGTCTTGAGTGCCTTGAGTGAATC------CT----G--SizeHit CountTotal NormTotal
No Reads
droTak1
GCCTTC-------------AAATA-CT----CC-CGA---------------------AT-GATGGA------------AATCTTCTTCTCCGAGCGATCTTAAAAAAAT-----AA----ATATAAGATATTATACA----------AATTA---------AGATAATAATTTA------------G-----AGGTAACTCACTTGACAGCTTTAGGTAGCTGAGGGTATTCTCGTCAATGGGGAAATAGCCAAT-A-----GT------GGCT---------------------------CCGTAT--------TSizeHit CountTotal NormTotal
No Reads
droEug1
CCATTG-------------TGCAA-C------------------------TTCGCCTCGG-AACTTTGAACGCGTCCTGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCT-------T-----------------AGAATTTTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTTG-A-----TCCTAGACTTCCGAATAT-TTAAGTGCCTTGAATGAATT------CT----G--SizeHit CountTotal NormTotal
No Reads
dm3
CAGTTA-------------AAATC-AT----AC-ATAATTGTTGACCACAATTGCCTCGGGAACTTCGATCGCGTCCTGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-------A-----------------AGAATTTTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAACAGCCTAG-A-----TCCGAA---TGCGAGTAT-CCGAGTGCCTTGCGTGAATC------CT----GGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................2215678870.00567887038229001410000100000100003863804924873349002301110041953139365518894908152490414906346258106632887960536171135910786121033015000962266151000000000000000003435342801003521710650566168260012012121643235171868114662138010012020002843121841662944310528112586100329215120097165260127127024131270875102577812372486031731426561374000000443630102720370240014024033413442221033928992713001319673171001718054211677041596111177283116771452414934127634714510782682375969400512336768676728291881517311168278707055111332854227918240154000110109932620002509171041122129102111563042291361548164545321180966818434900607613109798581036011422132127812432872422501957025521338724871111747008230567234347561495152021510131026060109791387925201720681441521
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................2111128278.0011282781040046000000000000000106924826860111100000120962762104156910362513663201368652688417242089830792481308058100027415150000000000000000029222221010002171021032224010000001210623085481014000700000100100151510510236976096152635501789317785357917109781921253623220555177613106753510000001806780100110050000210023236311211937621163997320151832252069313410222033198753661120814841531402121677126437018551017026264343282331013868210789554597164410011200111283000100001132301008170120201010108098433468228415871101672217120958142191111002051050411731785948330157013859634213071895555244036014307221400011795367838049435002011053
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................221925523.009255233020010000000000000000582109219104600000000599520692335670111442311822441819268189795026322168206445300063210000000000000000001013136010000000000010417000000055270811700010211300010100000581157540638531113135716112330255797563763118383017156228138156234233500000166406210400600002000343680126019289925879692919179150423411311283241932244467867573131437312210011592236112411148564012788620689143834108145440061628100530000000322022000028031011050700000023000065773562259563085991505940994476226712041400103202912138124553280712645307274427151757407003031103420363050230116421903016766400245216
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................221611438.006114382000090000000000000004077197032410000000006132753863916061131812786734121715313513849676291421265000157400000000000000000243200000000002000039100001001197241030003000200000000000211016910298100169761192023185768222807849816941791579302941201210000001010416100001001000010000032064089542104591691264127792010010241126421912002323910783404168834163968283153187818902159361366502100300000001950100000050100000404011000011012718245766146997021316206104299158417820420241100009118213075942356191543001002000810432319612416411421281210000512635112719210011045
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................211434515.00434515102101000000000000000047776865125400000020633419575291604265661867472412143389245471430951124429800067221700000000000000000344800000010002010059020000013022111200000000100000000000304358157175142142131811249451031143324184252243451702326892032603299442521937000002524352019020110000000111114144123190040153116231110245122271584913477110348154788430142710573862171054621893220114683347124833358588951319722001000000015701000001522001203060030013110105115262337764353829224589125717288312644000002320863111699120352702521259413203558422442247252035221100111117191129152649210020423
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................201284006.00284006000001100000000000000042896741333000000004603443852854297476136490259111551019381118177211062070006734100000000000000000342500000012001000053500000800003121050000000100000000000232632216933368694706116102511284587206154431444861130183129208700000020000000020010000010000040347114627128017811132103044722013157595742227012104469027011374312276101033612595144971333603791961002900000012200100010430000002000120000110103444186483658192235257338054551307346210000002001000664306122414388110250511014831843614696003010010101004698121103241001610
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.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAT....................................................................................................231631.006310000000000000000000004800000000000001681175024119020011613101212000000000000000000000000000000000000000000300000000000000000000000000000000000000000000100061442656171911142500000000000000000000000000000000010700000000000014270000000001000321011410000000000090000000010000000000000000000002100319190000000000000008276000000000000000000000000000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTTTACC................................................................................................................................................................................271620.0062000000000000000000000000200000000000001200000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000001002100241000000000000000000000000000000000000000000000000530000000000000599694913202400000000000000000000000000000000000000000023601643115000000000000001311790000002281118000000000000001351000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTTT...................................................................................................................................................................................241619.00619000000000000000000000002000000000000000000000020001100000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000002124001310000000000000000000000000000000001021010105000002700000000050002411443214617000000000000000000000000000000000000000000233026748317000000000000000366120000002542212000000000000101312000000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGAC..................................................................................................231616.0061600000000000000000000010000000000000000012000000041001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210004121000000000000000000000000000000000000000000000000100000000007100231332616600001000000000000000000000000000000000000044033320189135500000000000000066381716000000738000000000000001102000000
......................................................................................................AGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................191610.00610000000000000000000000470000000000100010000100030100010000100000000000000000000000000000000000000200000000000002000000000000000000021100000101000004101400200000000000000000000000000000000000020020000000000000000000000900333120437423210000000000000000000000000000000000000000002315941913434000000000000000016230000003580000000000000001000000079
droSim2
GCCTTT-------------AGATA-CT----GG-CGA---------------------AT-GATGTC------------GATCTTCTTTTCAGAGCGATCTAAAAAGTTT-----GTTATGATATAAGTAAAAT----------ATTGTTTTATG--------------A-------------AACAG-TGTGATTTCCCGTACTTGTCTGCTTCATGTAACCAAGAGTATTCTCATCGATGGGGAAGTATCCCAC-G-----GT------GGCT---------------------------CCGTAT--------TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................TA-CT----GG-CGA---------------------AT-GATGTC------------GATCTT........................................................................................................................................................................................................................................2311.00100000001000000000
droSec2
GCCTTT-------------AGATA-CT----GG-CGA---------------------AT-GATGTC------------GATCTTCTTTTCAGAGCGATCTAAAATGTTT--GTT---ATGATATAAGTAAAAT----------ATTGTTTTATG--------------A-------------AACAG-TTTGATTTTCCGTACTTGTCTGCTTCATGTAACCAAGAGTATTCTCATCGATGGGGAAGTATCCCAC-G-----GT------GGCT---------------------------CCGTAT--------TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CAGTTA-------------AGATC-AT----AAAATATTTGATGGCCACAATTGCCTCGG-AACTTCGATCGCGTCCTGAATT---TATATCGAGTTATCTAAGGAAATA-----GTA---------GCCGTGATTTTACCC-------A-----------------AGAATTTTTCACATATCACAGTTGC-------------TGTTTCTTTTAGATAGCTC-------T--------TTTGTAAGCAGCCTAG-T-----TCCGAA---TGCGAATAT-CCGAGTGCCTAGCGTGTATC------CT----GGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................2217158.007158145793201655830001195
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................2112892.00289212266910153063000102
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................2212790.0027906270500416500009
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................211901.0090128310027900050
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................201722.00722162700041500075
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................221651.0065105740014600066
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................231385.0038503661002400012
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................231323.00323027310021000037
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................231283.002830280000000003
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................211279.002790279000000000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTT......................................................................................................221274.002740263000120008
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................201252.002520252000000000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................231213.002130212001000000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................221205.002050205000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................221127.001270127000000000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTT.......................................................................................................21194.0094091001000002
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................23183.0083080001020000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAG....................................................................................................21155.0055055000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................22151.0051050000010000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................23149.0049048000010000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................19148.0048048000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATC.....................................................................................................................................................................................23148.0048070000000041
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTT......................................................................................................21146.0046046000000000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATT.................................................................................................24140.00400220000000018
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................22138.0038038000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................20131.0031030000000001
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................22130.0030030000000000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGATT.................................................................................................23129.0029025000010003
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................23128.0028027000100000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAG....................................................................................................24127.0027027000000000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................25123.0023030000000020
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................21122.0022022000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................19121.0021021000000000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTG........................................................................................................................................................................................21121.0021119001000000
......................................................................................................AGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................19120.0020020000000000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGATA.................................................................................................23119.0019011000000008
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAG......................................................................................................................................................................................22117.0017017000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................22115.0015015000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATG.....................................................................................................................................................................................22112.0012012000000000
...................................................................................................CTAAGGAAATA-----GTA---------GC............................................................................................................................................................................................16112.0012000000000012
.................................................................................................ATCTAAGGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................24110.0010000000000010
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................22110.0010010000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................23110.001009000100000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTT........................................................................................................20110.0010010000000000
......................................................................................................AGGAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................2019.00909000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................2218.00808000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATC.....................................................................................................................................................................................2217.00716000000000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTA.....................................................................................................2017.00706000010000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAGAC..................................................................................................2616.00600000000006
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATG.....................................................................................................................................................................................2316.00606000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................2416.00606000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTT......................................................................................................2016.00606000000000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATA.................................................................................................2415.00505000000000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAG....................................................................................................2015.00505000000000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTT.......................................................................................................2015.00505000000000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGATA.....................................................................................................................................................................................2115.00505000000000
......................................................................................................AGGAAATA-----GTA---------GCCGTGA.......................................................................................................................................................................................1814.00403000000001
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGAA..................................................................................................2314.00404000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGT.........................................................................................................................................................................................1914.00400000000004
.......................................................................................................................................TTTACCC-------A-----------------AGAATTTTTCACATAT......................................................................................................................................2414.00404000000000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................2314.00404000000000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAGATT.................................................................................................2213.00303000000000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCT.........................................................................................................1913.00303000000000
....................................................................................................................................................................................TATCACAGTTGC-------------TGTTTCTTTTAA....................................................................................................2413.00303000000000
........................................................................................................GAAATA-----GTA---------GCCGTGATT.....................................................................................................................................................................................1813.00303000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGG.......................................................................................................................................................................................2013.00321000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTA.....................................................................................................2113.00303000000000
.......................................................................................................GGAAATA-----GTA---------GCCGTGAT......................................................................................................................................................................................1813.00303000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGT.........................................................................................................................................................................................1812.00202000000000
.........................................................................................................................................................................................CAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................2112.00202000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTA....................................................................................................................................................................................2312.00202000000000
..........................................................................................................................................................................................AGTTGC-------------TGTTTCTTTTAG....................................................................................................1812.00202000000000
......................................................................................................AGGAAATA-----GTA---------GCCGTGATTTT...................................................................................................................................................................................2212.00202000000000
.....................................................................................................................................................................................ATCACAGTTGC-------------TGTTTCTTTTAGA...................................................................................................2412.00202000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTT.......................................................................................................1912.00202000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCG..........................................................................................................................................................................................1812.00211000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGAT..................................................................................................2412.00202000000000
......................................................................................................AGGAAATA-----GTA---------GCCGTGATTT....................................................................................................................................................................................2112.00202000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTT........................................................................................................1812.00202000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................2112.00210100000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAG......................................................................................................................................................................................2112.00211000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGATT.................................................................................................2512.00200000000002
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGG...................................................................................................2212.00202000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATAA....................................................................................................................................................................................2412.00201000010000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................2111.00101000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGG...................................................................................................2311.00101000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGT...................................................................................................2311.00101000000000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAAA.....................................................................................................................................................................................2411.00101000000000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTTAGATAA................................................................................................2511.00101000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATAG....................................................................................................................................................................................2311.00101000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTTTACC................................................................................................................................................................................2711.00101000000000
..................................................................................................TCTAAGGAAATA-----GTA---------GCCGTGAC......................................................................................................................................................................................2311.00101000000000
...................................................................................................................................................................................ATATCACAGTTGC-------------TGTTTCTTT.......................................................................................................2211.00101000000000
....................................................................................................TAAGGAAATA-----GTA---------GCCGTGATTGG...................................................................................................................................................................................2411.00101000000000
.....................................................................................................AAGGAAATA-----GTA---------GCCGTGAA......................................................................................................................................................................................2011.00101000000000
...................................................................................................CTAAGGAAATA-----GTA---------GCCGTGATTA....................................................................................................................................................................................2411.00101000000000
........................................................................................................................................................................................ACAGTTGC-------------TGTTTCTTTTAGAAT.................................................................................................2311.00101000000000
......................................................................................................................................................................................TCACAGTTGC-------------TGTTTCTTTTAGAA..................................................................................................2411.00101000000000
.......................................................................................................................................................................................CACAGTTGC-------------TGTTTCTTTT......................................................................................................1911.00101000000000
droEre2
GCCTTT-------------AAATA-CT----GC-CGG---------------------AT-AATATC------------GATTTTCTTCTCGGAGCGATCTAAGGAACCA-----ATCCATGGATATCTAGTAT-TCA----------ATTTAAT--------------A-------------AATGT-TTTAGATTAACTCACTGGTTTGGCGCATGTAACTCAGGGTGTTTTCATCGATTGGGAAGTAGCCCAC-A-----GT------GGCT---------------------------CCATAT--------TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/15/2015 at 02:35 PM