ID:

dwi_675

 Coordinate:

scf2_1100000004511:8809879-8810010 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -8.5 -8.5

Flybase annnotation

CDS [Dwil\GK17513-cds]; exon [dwil_GLEANR_17800:2]; CDS [Dwil\GK17513-cds]; exon [dwil_GLEANR_17800:3]; intron [Dwil\GK17513-in]

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy+
TART_DVLINEJockey+

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGTTCCAGTTCCAGTACAGGTTCCAGTTCCCGTTCCCGTTCAAGTGCCGGTCACAGCAGTCCCGGCCAATGGACCATCTTTGCCCGCCGTCGTAGCTCAGACTCAGCAAATGCCGCCAACAGCAGAGCAGCAGCCACAACCACAACAACATCATCCACATCAGCAACCACAACCACACCAGCAGCAACAACAGCAGCAGCTGCAACAGGGTAATCATAATCAAGCAGTAGC
***************************************************************************...((((((..((.((....(((.......)))....)).)).....))))))....**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V119
head
 M020
head
 V117
male body
..........................................................ATTCCCGGCCGATGGACCA........................................................................................................................................................... 19 2 1 3.00 3 0 0 3 0 0
...........................................................GTCCCGGCCGATGCACCA........................................................................................................................................................... 18 2 1 3.00 3 0 1 2 0 0
........................................................GCATTCCCGGCCGATGCACCA........................................................................................................................................................... 21 3 1 2.00 2 0 2 0 0 0
..........................................................ATTCCCGGCCAATGCACCA........................................................................................................................................................... 19 2 5 1.60 8 2 0 6 0 0
.........................................................CATTCCCGGCCGATGCACCA........................................................................................................................................................... 20 3 14 1.57 22 1 8 13 0 0
............................................................................................................................................................................................................AGCAGGGGAATCATAATC.......... 18 2 9 1.22 11 0 9 2 0 0
.........................................................GATTCCCGGCCAATGCACCA........................................................................................................................................................... 20 3 18 1.17 21 0 4 17 0 0
.........................AGTTCCCGTTCCCGTTCAAGTGCC....................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
........................................................TCAGTCCCGGCCGATGCACCA........................................................................................................................................................... 21 3 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................................GCAACAGGGTAATCATAATCAAGCAGT... 27 0 1 1.00 1 1 0 0 0 0
..........................................AAGTGCCGGTCACAGCAGTCCC........................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
...........................................................TTCCCGGCCGATGGACCA........................................................................................................................................................... 18 2 1 1.00 1 0 1 0 0 0
...........................................................................CATCTTTGCCCGCCGTCGTAGCTCA.................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
........................................................GCTGTCCCGGCCGATGCACCA........................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
..........................GTTCCCGTTCCCGTTCAAGTGCC....................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..................................................................................................................CGCCAACAGCAGAGCAGC.................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
............................................................................................GTAGCTCAGACTCAGCAAATGCC..................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0
................................................................................................................................................................................................AGCAGCAGCTGCAACAGGGT.................... 20 0 1 1.00 1 0 0 0 0 1
...........................................................................................................CAAATGCCGCCAACAGCAGAGCA...................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................AACAACAGCAGCAGCTGCAACAGGGT.................... 26 0 1 1.00 1 1 0 0 0 0
............................................................................ATCTTTGCCCGCCGTCGT.......................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1
.....................................................................................CGCCGTCGTAGCTCAGACTCAGC............................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0
......................................................................................................................AACAGCAGAGCAGCAGCCACAAC........................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...................................................................................................................GCCAACAGCAGAGCAGCAGC................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
..................................................GTCACAGCAGTCCCGGCCAAT................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
................................................................................................CTCAGACTCAGCAAATGCC..................................................................................................................... 19 0 2 0.50 1 0 0 0 1 0
..................................................................................................CAGACTCAGCAAATGCCGC................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
..........................................................ATTCCCGGCCTATGCACCA........................................................................................................................................................... 19 3 20 0.35 7 0 1 5 1 0
..........................................................ATTCCCGGCCGATGTACCA........................................................................................................................................................... 19 3 20 0.20 4 1 0 3 0 0
............................................................TCCCGGCCGATGCACCAT.......................................................................................................................................................... 18 2 6 0.17 1 0 1 0 0 0
..........................................................AATCCCGGCCGATGCACCA........................................................................................................................................................... 19 3 20 0.15 3 0 1 2 0 0
..........................................................ATTCCCGGCCCATGCACCA........................................................................................................................................................... 19 3 20 0.15 3 0 1 2 0 0
..........................................................TTTCCCGGCCGATGGACCA........................................................................................................................................................... 19 3 8 0.13 1 0 0 1 0 0
............................................................................................................................AGAACAGCGGGCACAACCAC........................................................................................ 20 3 9 0.11 1 0 0 0 0 1
...........................................................TTCCCGGCCAATGCACCA........................................................................................................................................................... 18 2 9 0.11 1 0 1 0 0 0
......................................................................................GCCGTCTTAGCTCAGCCG................................................................................................................................ 18 3 20 0.10 2 0 2 0 0 0
.........................................................GATTCCCGGCCGATGGACCA........................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 1
.........................................................GAGTCCCGGCCGATGCACCA........................................................................................................................................................... 20 3 14 0.07 1 0 0 1 0 0
..........................................................AGTCCCTGCCGATGCACCA........................................................................................................................................................... 19 3 14 0.07 1 0 1 0 0 0
...........................................................TTCCCGGCCGATGTACCA........................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0
.........................................................................................................................................................................................CAACAACAGCAGCAGCTGCAGCA........................ 23 1 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

ACCAAGGTCAAGGTCATGTCCAAGGTCAAGGGCAAGGGCAAGTTCACGGCCAGTGTCGTCAGGGCCGGTTACCTGGTAGAAACGGGCGGCAGCATCGAGTCTGAGTCGTTTACGGCGGTTGTCGTCTCGTCGTCGGTGTTGGTGTTGTTGTAGTAGGTGTAGTCGTTGGTGTTGGTGTGGTCGTCGTTGTTGTCGTCGTCGACGTTGTCCCATTAGTATTAGTTCGTCATCG
****************************************************************************************************...((((((..((.((....(((.......)))....)).)).....))))))....*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 M020
head
 V118
embryo
............................................CACGGCCAGTGTCGTCAGGGC....................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.................TTCCAAGGTCAAGGGCAAGGGC................................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................CGTTGTCTAAGTTGTCCCATT.................. 21 3 5 0.40 2 1 0 1 0
.................................................................................................................................ACGTCGGTGTTGGTGTTGTAGTATT.............................................................................. 25 3 3 0.33 1 0 1 0 0
...CAGGTCCAGGTCGTGTCCAAG................................................................................................................................................................................................................ 21 3 3 0.33 1 1 0 0 0
......................................CACGTTCACGGCAAGTGT................................................................................................................................................................................ 18 2 4 0.25 1 1 0 0 0
......................................................................................................................................GGTGTTGGTGTTGTAGTATTCG............................................................................ 22 3 20 0.15 3 1 2 0 0
....................................................GGGTTGTCAGGGGCGGTTAC................................................................................................................................................................ 20 3 7 0.14 1 1 0 0 0
........CAAGGTGGTGTGCAAGGTCAA........................................................................................................................................................................................................... 21 3 7 0.14 1 0 1 0 0
........................................................................................................................................................................................CGTTGTTGTCCTCGTCGAG............................. 19 2 20 0.10 2 2 0 0 0
...................................................................................................................................................................CATTGGCGTTGGTGTGGAC.................................................. 19 3 11 0.09 1 1 0 0 0
............................................................................................................................................GGTTTCGTTGTAGTAGGTG......................................................................... 19 2 15 0.07 1 0 0 0 1
.................................................................................................................................................................................................CGTTGTCTAAGTTGTCCCAT................... 20 3 16 0.06 1 0 0 1 0
.....................................................................................................................................................GTAATCGGGGTAGTCGTTGGT.............................................................. 21 3 19 0.05 1 0 1 0 0
......................................................................................................................................GGTGTTGGTGTTGTAGTATT.............................................................................. 20 2 19 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004511:8809829-8810060 + dwi_675 TGGTTCCAGT----------------------TC------------------------------------------------------------------------------CAGTACAG------------GTTCCAGTTCCCGTTCCCGTTCAAGTGCCGG---TCA--CAGCAGTCCCGGCC--------------------------------------AA--------------------------------------------------------------------------------------------------------T--GGACCATCT-----------------------------------------------------------------------------------TTGCCCGCCGTCGTAGCTCAGACTCAGCAAA-----------------------TGCC-------------GCCAACAGCAGA---------G------------C-A---G---------------------------------------------------------------------------------CAGCCA------------CAACC---------------------------------------------------------------------------------------------ACAACAACA---------T------------------------------C---ATCCACAT------------CAGCA------ACCACAA------------CCACA---------CCAGCA---------------------------GCAAC-----AACAGCAGCAGC------------------------------T---GC---------------AA---------------------CAGGGTAATCAT---AATCAAGCA-------------GTAGC
droVir3 scaffold_13049:16376757-16376941 + CAGGCGCTGG-----------------------------------------------------------------------------------------TTGCCGCCGCTCA--------------------------------------------------G---CA----------------------------------------GCAACAGC---AA---------------------------------------------------------C--------GT-C-AAGTGGCCGCCGCTGCCGTG--------------------------------------------------------------------------GCCGCAGCAGC-------------------------------------------------------------------------------------------------------------------------CGC----CCAAC-A---------------------------------------------------------------------------------------------GCAGCAGCACCAGC---------------A---------------------------------------------------------ACAACAGCA---------------ACAGCA---------G------------------------------------CAT---------------CAGCA------GCAGCAGCAACAACAA---CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAG---------CAGCAACAA------CAGCAA---CAA------------CATGCCGCA-------------GTAGC
droMoj3 scaffold_6500:25347657-25347889 - GTCCC--GCT----------------------TC------------------------------------------------------------------------------CCGTCCC------------AGTCCCAGTCCCCGTATGTGCACCAGAAACGG---CAG--CAGC-----------------------------------AGCAGC---AGACGCCGAT-----GCGA----------------------------------------------------C-AA-----------------------------------------------------------------------------------------------------------------------------------GAGCA--------------------------------------------------------------------------------GCAG---------CTG---C-A---G---C------------------------------------------------------------------------------GGCAGCAACAACAGGAACAGC---------------A---------------------------------------------------------ACAACAGCAGGA------------ACAACA---------A------------------------------GAG---CAA---------------C------------------------AG---CAGCA---ACA---GCAACAGCAACAGCAACTGCCAACACTGCAGCAACAAC-----AGCTACAGCTGC------------------------------A---------------------------------------GCAACAGCTTCTTCAG----TTCCAGCA-------------GCAGC
droGri2 scaffold_14853:4643070-4643292 - CTCAGCCCAT-------------TGCTGTCAA--TGTTCCTAATCCCGTCGAGCAG----------------------------------------CGACCGCCATC-----------------------------------------------------------GAG-------------------------------------CAATAGC------AG---------------------------------------------------------CCAGCGTGGCT-CA--------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------TACCGCCCGCTG---CACTACCACCTCCGTCACTGAGCTCACAGCAGCAA------------C-A---G---C------------------------------------------------------------------------------AGCAA---------------C---------------A---------------------------------------------------------ACAACAGCAACA---------------------------G---------------------------------CAACAGCAG------------CAGCA------ACAACAGCAGCAACAG---CAGCA---------ACA-----------------------------------ACA------GCA------------------------------------A------CAG---------CAACAA---------CAGCAG----------------------CAGCAACAA---------GTGGC
dp5 XR_group6:8981822-8982048 + GGGTC-CGGG----------------------AC------------------------------------------------------------------------------CGGGACAGGCTCCTGGCCAAATCCCAGTTTC------------AGTG---G---TCACGCAGCCATCCCTGACAAATGGACA--TGCCATGGACCAACTGCA-----------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-AGCAGCAGCAGCAGCACCATCACC------AC------------------------------------------------------CAGCTACAACTG---------C---------------------------------------------------------------------------------A---------------ACAACAGCAGCAGCAG---------------------------------CACCAC---------------CAACA---------ACA---------------ACA---------ACA-----------------------------------ACAGCA---------------GCAACAACAACAACA------------ACAAC------AACACCATCAC------------CATCAG---CAA----------------TCATC-------------GCAGC
droPer2 scaffold_6:4146718-4146939 + TCCCAC--------------------------------------------------------------------------------------------------------------ACAG------------TTTGCGGCCGCCGT--------------------------------------------------TGCCGCCCACCACCAGCA-----------------------------------------------------------------------------------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCCCAGC-AGCAGGCGCAACAG---------C------AGCAGGTGCAACA------------GCAAC------------------------------------------------AG------------GT------------------------------TGCGTACGCAGTAGCGGCAGCACAGCAG---CCACAGCT---------GCAACACCA---------G------------------------------------CAG---------------CAACA---------G---------------CAGCA---------GCA--------------------------------------------------GGCGCAGCAGCAGGCACAGCA------------A------GTGCAACAGCAGCAGCAG------------CGT---CTG---GCACAGTTCAATCAAGCG-------------GCAGC
droAna3 scaffold_12916:13826132-13826334 + CCAGTCGGAG-----AGGAAGGTA------AG--C------GCTCCCGTTGTGGTGTCGCAGCCGGCAGCCTGTGCCGTCACTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACAACATC-----------------------GCAAG----------------------------------------------------------------GCCC-------------GCCGGTGGCCAC------------------CCAAC-AGCAACA---------------------------------------------------------------------------------ACAACAACAA---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------AGCAGCAACAACAG---CAGCA---------GCA-----------------------------------ACAGCAACAGCA---------------GCAAC---------------AG---C---------------AACAA---------ATGAT-------------------GATGCAACA-------------GCAAC
droBip1 scf7180000396696:237982-238198 - GCGGCCCAGT------------------TCAA--C------GG--------------------------C-----------------CAGGATGGCCGACCACCATCCTCCA--------------------------------------------------G---CAG--CAGC-----------------------------------GG---C---AG---------------------------------------------------------CCAGCGCGGAT-CC--------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------TCCCGCCGGCAG---CCCTGCCCCCACCGTCGCTCAGCTCCCAGCAGCAG------------C-A---G------------------------------------------------------------------------------------CA---GGCC------CAGC---------------A---------------------------------------------------------ACAGCAGCAGCA---------------------------A---------------------------------CAACAA---------------CAACA---------GCA---------------ACAACAACAGTCCCAGC-----------------------------------AGCA------------------------GCAGCAGCAAC------AG---T---------CC---CAG------------CAGCAG---CAA----------------CAGCA-------------GCAGC
droKik1 scf7180000302696:2004085-2004320 - CCAGGT-------------------------------------------GC----------AGCAGCAGC------------------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCCA------------------------------------GCCGCAGCAGC-------------------------------------------------------------------------------------------------------------------------AGC----CTATCCAGGTGCAGCAGCAG---------CCTATCCAGGTGCAGCAGCAGCCTGTCCAGCCGCAGCACCAGCGTATCCAGCAGCCACTCCAACAGCAACAACAG---------C---------------------------------------------------------------------------------A---------------ACTTCA---------G---------CAGCAGCAGCAGCAACTTTATAAG---CAG---------------CA------------ACAG------------CAACT---------TCAAC-----------------------------------AGCA------------------------GCAAATGCAGCAAGTTCAG---CAGCAG---------CAA------------CTTCAT---CAG----------------CAGCA-------------ACAGC
droFic1 scf7180000453927:1291730-1291939 + TGGTCGCCAT-------------G--------CC------------------------------------------------------------------------------C-AGCCAG------------GTTGCA------T--CGAGCACCGGAA-------CT-----CCTACCCCAGCC------ACCGGCGTCATTCATCATCACCA-----------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------------------------------AACAGCAG---------------------------------------------------------------------C-AGCAAC---------------------------------------------------------------------------TCCAGCACCAGCATCAGCAGCAGCAGCAG------------CA---------------------------------------------------------ACAGCAGCATCA---------------------------A---------------------------CAACAG---CAG---------------CA------------TCAG------------CAACT---------CCAACA---------------------------TCAAC-----AGCAGCATCAGC------------------------------AG---CAGCAG---------CAT------------CAGCAG---CAT----------------CAACA-------------GCAGC
droEle1 scf7180000491104:2812113-2812325 - CAGCCCCAGC----------------------AT------------------------------------------------------------------------------C-----------------------------------------------------------AGC-----------------------------------AT---CAGCTTACCTTGAACAATCGCGT----------------------------------------------------C-AAGAGCCAGC---AGAACTTCCAGCAAACGCTGCGCAT--GCAGCAGATGATGGCTC-----------------------------------------------------------------------------------CATCGATGC------------------------------------------------------------------------------------CCAAC-A---------------------------------------------------------------------------------------------TCAGCAACA------T------------GT------------------------------ACCA-----------------------TCACCAGCAGCA------------ACAACA---------G------------------------------------CAA---------------C------------ATCTG------------CCCCT---------CCAGCA---------------------------GCAGC-----AGCAGCAGCAGC------A---GCAAC---------------AG------------------CAGCAA---------C--------CAG------------TGATGAGCA-------------GCAGC
droRho1 scf7180000763611:285183-285414 + CAGTTCGA--------------------------C------GATCCCGTGGAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCTGGCCTCGTTGGAGTTCAGCGCCGGTTCCACGGGCAAATCATC-----------------------GCTAACGGACAACTTTTTGA-----------------------TGCAGCAGCATCTGATGCAGCCCGCCG---GACC------CCA---------------GCAA-------------------CAGCAGC------------------------------------------------------------------------------AGCAGCAACAA---------CCCTTTGGCCATCAGCA---------------------------------------------------------------------------------ACAGCA---------G------------------------------------------------------CAGCA------ACAACAACAACAACAA---CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAA---------CAGCAG------------CAG---CAG----------------CAGCA-------------GCATA
droBia1 scf7180000302126:3508306-3508551 + ACAGTT-------------------------------------------GC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACGGCAATGGCAGTCAGAATCCCTTC-A---TCAAGG---AGAACTACTGGGAGGCGCCGCCCACCAGGGCCAGCTTGCTGCTC----------------------C----------ACTC-----------------------GCCCACGGAGTACTCTGAGG-----------------------AGCAACAGCA---------------------------------------------------G---------------C-AGCAGCAGCAACAG---------C------AA------------------------------------------------------CAGCAACAGCAG---------CAG------------CA---------------------------------------------------------------------------------ACAGCA---------G------------------------------------CAG---CAACAGCAGCAGCA------------AC---------AG---CAGCA---------GCA-----------------------------------ACAGCA---A---------------------CA---------------G---CAGCAG---------CAA------------CAGCAG---CAG----------------CAGCAACATATGCATGCCTCAGC
droTak1 scf7180000415169:966901-967117 + TTC---CAGA---------------------------------------CC-------------------------------------------------------------------------------------------------------------------------AGC-----------------------------------GG---CAACTTTCTGCGACCGATCGCCTTCAAGCCGATTCCATTTGAGCCGGACTATC---------------------------------------------------------------------------------------------------------------------------------------------GCATC--------GCCTGCCAGC--------------------AGCAGCAGCA---------------------------------------------------G---------------C-ACCAGCAGCAATTG---------C------AG------------------------------------------------------TTGCAACAGCAG---------CAG------------CA---------------------------------------------------------ACAGCTGCAGCT------------GCAACA---------C------------------------------------CAC---------------CAACA---------G---------------CAGCA---------GCA-----------------------------------ACAGCA---------------ACAGCAGCAGCAACA------------A------CAGCAACACCAACAG---------------CAA---CAT----------------CAGGC-------------GCTGC
droEug1 scf7180000409122:194422-194622 - CCGCC-CAGC----------------------AT------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------AGCAAC---AG---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCAGTGGC-------------------------------------------------------------------------------------------------------------------------TGC----CCATC-AGCAGCAGCAACAG---------C------AGTTGCAGCAGCAGCAA---CAACTGCTGCAGTTGTCCATCCAGCAGG---------------------------------------------------------------------------------------------CAGCTCACCATCATCAGCAGGA------------GCAGCA---------T------------------------------------CGC---------------CAACA---------G---------------CAGCA---------ACA-----------------------------------GCAACA---------------TCAGCAGCAACAACA------------A------CAGCAACATCATCAGCAG------------CAA---CAG----------------CAGGG-------------TCATC
dm3 chr2R:14633463-14633689 + CGGCAGCAGC----------------------AA------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------ACTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCAGCAGTAATGGCAACGAG------------------------------------------------------------------------------------------------------------CAGCACTCCCAGC-AGCAACA---------------------------------------------------------------------------------------TCTG---------C---------------AGCTGCAGCAGCAGCAACAGCAGCATGCCCA---------------------------GCCAAACGAGTA------------CCAACAGTTGCTGCAGCATCCCCACCATCACTATCAGCAACACTA-CAG---CGG---------------C------------AACAA------------CAACA---------CCAGCG---------------------------GCAAC-----AACAGCAATAGC------------------------------A---GC---------------AACAC--GCAGCAATACCAC---CAG----------------AGACA-------------GCAGC
droSim2 3r:9978767-9978958 + CGATTCCTGG-------------G-------------------------CC----------ACCAGCAGGCCCTGTCGCCGCATCCA-----------------------C-----ACCG------------G--------------------------------------CTGTCGTCCTCGTCGACGCCACC--AGCTTTGC---------A-----------------------------------------------------------------------------------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCCCTGC-AGCAGCAGCAACAG---------C------ACATGCT---------------------------------------------------------GCAGCAGCACCAGC---------------T------------------------------------------------------------------------------------------------A------------------------------------CAG---CAACAGCTGCAGCATCA---GCAGCAGCAA------------CAACA---------TCA-----------------------------------------------------------------------------------A---CAGCAA---------TTG------------CAGCAG---CAG----------------CAGCA-------------ACAG-
droSec2 scaffold_0:20880690-20880913 + AGGGCTCAGG----------------------CT------------------------------------------------------------------------------C------------------AGTACCAGCAGCAGCAACAGCAGCAGTTCGAGGTACT-----GCAGGCCCAGGC--------------------------------------AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GGA---------------G------CAACACTTG---C-A---G---C---------------------------------A------------GCAACACCAGCAGCACCAGT------------TGCAGCTCTTG---------C---------------A---------------------------------------------------------ACTGCAGCAGCA---------------------------G---------------------------------CAACAG---------------CAGTT---------GCA---------------GCA---------ACC---AGTGCAGCACCATCCGCCGCAGCAGCTGCAAC-----AACAGCAGCAGC------------------------------A---GC---------------AG---------------------CAGGTGGCTCAG---GATCCAGCA-------------GCAAG
droYak3 3L:12472419-12472615 - CGGCTCCCGT----------------------CC------------------------------------------------------------------------------C------------------GGTTCCAGTTCCAGTTCCAGTTGCAGAATCTGGC-CAG-----CA--------------------------------GAAGC------AG---------------------------------------------------------CCAT-----AT-CC--------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TACAGCCAGCAC---CACC------ACG---------------GCAG-------------------CACCAGC------------------------------------------------------------------------------AGCAGCATGTG---------C---------------A---------------------------------------------------------ACACCAGCAGCAGCCACACTTGCAACACCA---------T------------------------------GAG---CTG---------------C------------------------AACACCACCA---------CCACC--------------------------------------A---GCA------------------------------------G------------------CAGCAGCAA------CAGCAG---CAG----------------CATCC-------------ACCAC
droEre2 scaffold_4690:17734652-17734893 - CCAAAACAGTCAGGGCGGACCACAGATACCGG--C--------------GC----------ACCAGCATC------------------------------------------C-ACCCAG------------CTTGCA------T--CA-------------G---CAA--CAGC-----------------------------------AG---C---AA---------------------------------------------------------CCACC--------------------GCCTCCCTCGCAGCAGCAGCAGCAGCT--GCATCAGCTCAAG-------------------------------------------------------------------------------------------------------------------------------------TCCC---C------GCA---------------G----------------------------CAACAC---------C------AG------------------------------------------------------CAGCAGCTGCAG---------CA------------------------------------------------------------------------GCACCAGCAGCA------------GCAACA---------T---------------------------CACCAG---CAG---------------CAACAGCA---GCAG------------------CA---------GCA-----------------------------------TCACCAGCAGCA---------------GCAAC---------------AG---CAGCAG---------CAA------------CATCAT---CAG----------------CAGCA-------------ACAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGGTTCCAGT----------------------TC------------------------------------------------------------------------------CAGTACAG------------GTTCCAGTTCCCGTTCCCGTTCAAGTGCCGG---TCA--CAGCAGTCCCGGCC--------------------------------------AA--------------------------------------------------------------------------------------------------------T--GGACCATCT-----------------------------------------------------------------------------------TTGCCCGCCGTCGTAGCTCAGACTCAGCAAA-----------------------TGCC-------------GCCAACAGCAGA---------G------------C-A---G---------------------------------------------------------------------------------CAGCCA------------CAACC---------------------------------------------------------------------------------------------ACAACAACA---------T------------------------------C---ATCCACAT------------CAGCA------ACCACAA------------CCACA---------CCAGCA---------------------------GCAAC-----AACAGCAGCAGC------------------------------T---GC---------------AA---------------------CAGGGTAATCAT---AATCAAGCA-------------GTAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................AGTTCCCGTTCCCGTTCAAGTGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------AA---------------------CAGGGTAATCAT---AATCAAGCA-------------GT...2711.00100010
..........................................................................................................................................................AAGTGCCGG---TCA--CAGCAGTCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
................................................................................................................................................................................................................................................................................................................................................CATCT-----------------------------------------------------------------------------------TTGCCCGCCGTCGTAGCTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..........................................................................................................................................GTTCCCGTTCCCGTTCAAGTGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------GCCAACAGCAGA---------G------------C-A---G---------------------------------------------------------------------------------C...................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCTCAGACTCAGCAAA-----------------------TGCC-------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC------------------------------T---GC---------------AA---------------------CAGGGT....................................2011.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA-----------------------TGCC-------------GCCAACAGCAGA---------G------------C-A---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-----AACAGCAGCAGC------------------------------T---GC---------------AA---------------------CAGGGT....................................2611.00100010
.................................................................................................................................................................................................................................................................................................................................................ATCT-----------------------------------------------------------------------------------TTGCCCGCCGTCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGTCGTAGCTCAGACTCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGA---------G------------C-A---G---------------------------------------------------------------------------------CAGCCA------------CAAC..............................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAACAGCAGA---------G------------C-A---G---------------------------------------------------------------------------------CAGC................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..................................................................................................................................................................G---TCA--CAGCAGTCCCGGCC--------------------------------------AA--------------------------------------------------------------------------------------------------------T--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGACTCAGCAAA-----------------------TGCC-------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACTCAGCAAA-----------------------TGCC-------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100010
droVir3
CAGGCGCTGG-----------------------------------------------------------------------------------------TTGCCGCCGCTCA--------------------------------------------------G---CA----------------------------------------GCAACAGC---AA---------------------------------------------------------C--------GT-C-AAGTGGCCGCCGCTGCCGTG--------------------------------------------------------------------------GCCGCAGCAGC-------------------------------------------------------------------------------------------------------------------------CGC----CCAAC-A---------------------------------------------------------------------------------------------GCAGCAGCACCAGC---------------A---------------------------------------------------------ACAACAGCA---------------ACAGCA---------G------------------------------------CAT---------------CAGCA------GCAGCAGCAACAACAA---CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAG---------CAGCAACAA------CAGCAA---CAA------------CATGCCGCA-------------GTAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAGCAA---CAA------------CATGCCGCA-------------GT...2211.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................A----------------------------------------GCAACAGC---AA---------------------------------------------------------C--------GT-C-AAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC-------------------------------------------------------------------------------------------------------------------------CGC----CCAAC-A---------------------------------------------------------------------------------------------GC..........................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GCCGCCGCTGCCGTG--------------------------------------------------------------------------GCCGCAGCAGC-------------------------------------------------------------------------------------------------------------------------CGC----CC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------A---------------------------------------------------------ACAACAGCA---------------ACAGCA---------G------------------------------------CAT---------------CAGCA------GC..........................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GCCGCTGCCGTG--------------------------------------------------------------------------GCCGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GTG--------------------------------------------------------------------------GCCGCAGCAGC-------------------------------------------------------------------------------------------------------------------------CGC----CC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----CCAAC-A---------------------------------------------------------------------------------------------GCAGCAGCACC.................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CAGCAA---CAA------------CATGCCGC...................2020.501000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------ACAGCA---------G------------------------------------CAT---------------CAGCA------GCAGCAGCA...................................................................................................................................................................................................2570.292000000000000000000000000000000000200000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------------ACAGCA---------G------------------------------------CAT---------------CAGCA------GCA.........................................................................................................................................................................................................22130.152000000000000000001000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------C.............................................................................21200.153003000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAA---CAGCA---------ACA-----------------------------------ACAACA---............................................................................................................................21200.153000000000000000000000000000000300000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CA............................................................................19200.102000000000000000000000000000011000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------ACAACAGCA---------------ACAGCA---------G------------------------------------CA.......................................................................................................................................................................................................................................19200.102000000000000000000000000000100000000000000000000000000000000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---------------A---------------------------------------------------------ACAACAGCA---------------ACAGCA---------G------------------------------------.........................................................................................................................................................................................................................................21200.102000000000000000000000000000000000010000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------CAGCAACAA------CAGCAA---CAA------------C..........................21200.102000000000000000000010000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------GCAGCAGCAACAACAA---CAGCA---------...........................................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------ACAGCA---------G------------------------------------CAT---------------CAGCA------GCA.........................................................................................................................................................................................................21150.071000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-A---------------------------------------------------------------------------------------------GCAGCAGCACCAGC---------------...............................................................................................................................................................................................................................................................................................................................................................................19180.061000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------G------------------------------------CAT---------------CAGCA------GCAGCAGCAACA................................................................................................................................................................................................22180.061001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------ACAACA---A---------------------------------------------CAG---------CAGCAACAA------CAGCAA---CA........................................28190.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---A---------------------------------------------CAG---------CAGCAACAA------CAG................................................19200.051000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------CAGCA------GCAGCAGCAACAAC..............................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------GCAGCAGCAACAACAA---CAGC.....................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---A---------------------------------------------CAG---------CAGCAACAA------CAGCAA---CA........................................24200.051000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAG---------CAGCA.............................................................25200.051000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------CAG---------CAGCAACAA------CAGCAA---CA........................................21200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAA---CAGCA---------ACA-----------------------------------ACAACA---............................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---A---------------------------------------------CAG---------CAGCAACAA------CAGCAA---CAA------------CA.........................25200.051000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAA---CAGCA---------ACA-----------------------------------ACAACA---............................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAA---CAGCA---------ACA-----------------------------------.....................................................................................................................................21200.051000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------------------ACAACA---A---------------------------------------------CAG---------CAGCAACAA------CA.................................................23200.051000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------CAGCAACAA------CAGCAA---CAA------------...........................20200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAG---------CAGC..............................................................25200.051000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAACAA---CAGCA---------ACC-----------------------------------.....................................................................................................................................23200.051100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------A---------------------------------------------------------ACAACAGCA---------------ACAGCA---------G------------------------------------C........................................................................................................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------G------------------------------------CAT---------------CAGCA------GCAGCAG.....................................................................................................................................................................................................20200.051000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAG---------CAGCAACAA------CA.................................................26200.051000000000000000000010000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAG---------CA................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------ACAACA---A---------------------------------------------CAG---------CAGCAACAA------C..................................................21200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------G------------------------------------CAT---------------CAGCA------GCAGCAGC....................................................................................................................................................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA---CAGCA---------ACA-----------------------------------ACAACA---............................................................................................................................23200.051000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAG---------CAGCAACAA------C..................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------------CAGCA------GCAGCAGCAACA................................................................................................................................................................................................19200.051000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------A---------------------------------------------------------ACAACAGCA---------------ACAGCA---------..............................................................................................................................................................................................................................................................................19200.051000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------A---------------------------------------------------------ACAACAGCA---------------ACAGCA---------G------------------------------------CA.......................................................................................................................................................................................................................................22200.051000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA---CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAG---------C.................................................................27200.051000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA---A---------------------------------------------CAG---------CAGCAACAA------CAG................................................22200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------GCAGCAGCAACAACAA---CAGCA---------ACA-----------------------------------AC...................................................................................................................................27200.051000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------G------------------------------------CAT---------------CAGCA------GCAGCAGCA...................................................................................................................................................................................................19200.051000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAG---------CAGCA.............................................................21200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---------------CAGCA------GCAGCAGCAAC.................................................................................................................................................................................................19200.051000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------A---------------------------------------------------------ACAACAGCA---------------ACAGCA---------G------------------------------------C........................................................................................................................................................................................................................................20200.051000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---A---------------------------------------------CAG---------CAGCAACAA------CAGCAA---..........................................21200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAACAA---CAGC.....................................................................................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
droMoj3
GTCCC--GCT----------------------TC------------------------------------------------------------------------------CCGTCCC------------AGTCCCAGTCCCCGTATGTGCACCAGAAACGG---CAG--CAGC-----------------------------------AGCAGC---AGACGCCGAT-----GCGA----------------------------------------------------C-AA-----------------------------------------------------------------------------------------------------------------------------------GAGCA--------------------------------------------------------------------------------GCAG---------CTG---C-A---G---C------------------------------------------------------------------------------GGCAGCAACAACAGGAACAGC---------------A---------------------------------------------------------ACAACAGCAGGA------------ACAACA---------A------------------------------GAG---CAA---------------C------------------------AG---CAGCA---ACA---GCAACAGCAACAGCAACTGCCAACACTGCAGCAACAAC-----AGCTACAGCTGC------------------------------A---------------------------------------GCAACAGCTTCTTCAG----TTCCAGCA-------------GCAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCAG----TTCCAGCA-------------GCA..1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------C------------------------AG---CAGCA---ACA---GCAACAGCA..................................................................................................................................................................22200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------C------------------------AG---CAGCA---ACA---GCAACA.....................................................................................................................................................................20200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------ACAACA---------A------------------------------GAG---CAA---------------C------------------------AG---CA.......................................................................................................................................................................................19200.051100000
droGri2
CTCAGCCCAT-------------TGCTGTCAA--TGTTCCTAATCCCGTCGAGCAG----------------------------------------CGACCGCCATC-----------------------------------------------------------GAG-------------------------------------CAATAGC------AG---------------------------------------------------------CCAGCGTGGCT-CA--------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------TACCGCCCGCTG---CACTACCACCTCCGTCACTGAGCTCACAGCAGCAA------------C-A---G---C------------------------------------------------------------------------------AGCAA---------------C---------------A---------------------------------------------------------ACAACAGCAACA---------------------------G---------------------------------CAACAGCAG------------CAGCA------ACAACAGCAGCAACAG---CAGCA---------ACA-----------------------------------ACA------GCA------------------------------------A------CAG---------CAACAA---------CAGCAG----------------------CAGCAACAA---------GTGGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---------CAACAA---------CAGCAG----------------------CAGC...................19200.10220
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAGCA------ACAACAGCAGCAACAG---CA.......................................................................................................................................................................................24200.05110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAGCA------ACAACAGCAGCAACAG---CAGCA---------...........................................................................................................................................................................27200.05110
dp5
GGGTC-CGGG----------------------AC------------------------------------------------------------------------------CGGGACAGGCTCCTGGCCAAATCCCAGTTTC------------AGTG---G---TCACGCAGCCATCCCTGACAAATGGACA--TGCCATGGACCAACTGCA-----------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-AGCAGCAGCAGCAGCACCATCACC------AC------------------------------------------------------CAGCTACAACTG---------C---------------------------------------------------------------------------------A---------------ACAACAGCAGCAGCAG---------------------------------CACCAC---------------CAACA---------ACA---------------ACA---------ACA-----------------------------------ACAGCA---------------GCAACAACAACAACA------------ACAAC------AACACCATCAC------------CATCAG---CAA----------------TCATC-------------GCAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------ACA---------------ACA---------ACA-----------------------------------ACAGCA---------------GC..............................................................................................................21200.1530030000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------ACA-----------------------------------ACAGCA---------------GCAACAACAACA....................................................................................................22200.1020101000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---------------ACA---------ACA-----------------------------------ACAGCA---------------GCAACA..........................................................................................................21200.1020100100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------ACA---------ACA-----------------------------------ACAGCA---------------GCAACAAC........................................................................................................22200.1020011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------ACA---------ACA-----------------------------------ACAGCA---------------GCAACAAC........................................................................................................21200.1020110000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------ACA---------ACA-----------------------------------ACAGCA---------------GCAACAACA.......................................................................................................23200.1020110000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAG---------------------------------CACCAC---------------CA.....................................................................................................................................................................................................................23110.0910100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---------ACA---------------ACA---------ACA-----------------------------------ACAGCA---------------GCAACA..........................................................................................................24140.0710000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------ACAGCA---------------GCAACAACAACAACA------------ACA..................................................................................25190.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AGCAGCAGCAGCAGCACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------ACA-----------------------------------ACAGCA---------------GCAACAACAACA....................................................................................................23200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAG---------------------------------CACCAC---------------C......................................................................................................................................................................................................................19200.0510001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAACA------------ACAAC------A.........................................................................21200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------------ACAAC------AACACCATCT................................................................18200.0510001000000
...................................................................................................................................................................................................................GCA-----------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-AGCAGCAGCAGCAGCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------C---------------------------------------------------------------------------------A---------------ACAACAGCAGCAGCAG---------------------------------C...........................................................................................................................................................................................................................................20200.0510000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------------------ACAGCA---------------GCAACAACAACAACA------------A....................................................................................24200.0510001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------ACA---------------ACA---------ACA-----------------------------------ACAGCA---------------GCAA............................................................................................................24200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------GCAACAACAACAACA------------ACAAC------AACA......................................................................27200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACA------------ACAAC------AACAC.....................................................................21200.0510010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---------ACA-----------------------------------ACAGCA---------------GCAACAACA.......................................................................................................21200.0510100000000
droPer2
TCCCAC--------------------------------------------------------------------------------------------------------------ACAG------------TTTGCGGCCGCCGT--------------------------------------------------TGCCGCCCACCACCAGCA-----------------------------------------------------------------------------------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCCCAGC-AGCAGGCGCAACAG---------C------AGCAGGTGCAACA------------GCAAC------------------------------------------------AG------------GT------------------------------TGCGTACGCAGTAGCGGCAGCACAGCAG---CCACAGCT---------GCAACACCA---------G------------------------------------CAG---------------CAACA---------G---------------CAGCA---------GCA--------------------------------------------------GGCGCAGCAGCAGGCACAGCA------------A------GTGCAACAGCAGCAGCAG------------CGT---CTG---GCACAGTTCAATCAAGCG-------------GCAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAG------------CGT---CTG---GC..................................2313.003300000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG---------C------AGCAGGTGCAACA------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAG------------CGT---CT........................................2120.501001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA---------GCA--------------------------------------------------GGCGCAGCAGCAGG........................................................................................................2230.331010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCA---------G------------------------------------CAG---------------CAACA---------G---------------CAGCA---------GCA--------------------------------------------------......................................................................................................................22200.051000010
droAna3
CCAGTCGGAG-----AGGAAGGTA------AG--C------GCTCCCGTTGTGGTGTCGCAGCCGGCAGCCTGTGCCGTCACTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACAACATC-----------------------GCAAG----------------------------------------------------------------GCCC-------------GCCGGTGGCCAC------------------CCAAC-AGCAACA---------------------------------------------------------------------------------ACAACAACAA---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------AGCAGCAACAACAG---CAGCA---------GCA-----------------------------------ACAGCAACAGCA---------------GCAAC---------------AG---C---------------AACAA---------ATGAT-------------------GATGCAACA-------------GCAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG---CAGCA---------GCA-----------------------------------ACAGCAACA............................................................................................................................23200.357130003
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------AGCA......................................................................................................................................................................................................25200.204010003
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAG---CAGCA---------GCA-----------------------------------ACAGC................................................................................................................................21200.204040000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG---CAGCA---------GCA-----------------------------------ACAGCAACA............................................................................................................................21200.153000003
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAG---CAGCA---------GCA-----------------------------------ACA..................................................................................................................................19200.153010002
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG---CAGCA---------GCA-----------------------------------ACAGCAACAGCA---------------GC........................................................................................................2770.141010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------AGCAGC....................................................................................................................................................................................................22200.102020000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------AGC.......................................................................................................................................................................................................23200.102020000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------AGCA......................................................................................................................................................................................................20200.102002000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---CAGCA---------GCA-----------------------------------ACAGCAAC.............................................................................................................................19200.102000002
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---------------C------------AGCAGCAACAACAG---CA.......................................................................................................................................................................................22200.102020000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------GCA-----------------------------------ACAGCAACAGCA---------------GCAAC---------------......................................................................................21200.102020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------AGCAGC....................................................................................................................................................................................................21200.102020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAG---CAGCA---------GCA-----------------------------------ACAGCAAC.............................................................................................................................24200.102000002
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAG---CAGCA---------GCA-----------------------------------ACAGCAACAGC..........................................................................................................................26120.081010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------..........................................................................................................................................................................................................25120.081010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------..........................................................................................................................................................................................................24120.081010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------C...........................................................................................................................................................................................................................................21140.071010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA---------------------------------------------------------------------------------ACAACAACAA---------C---------------------------------------------------------------------------AGC---A---------------AC...........................................................................................................................................................................................................................................................................................23140.071010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAG---CAGCA---------GCA-----------------------------------ACAGC................................................................................................................................27140.071010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---------------C------------AGCAGCAACAACAG---CAGCA---------...........................................................................................................................................................................25200.051000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------C------------AGCAGCAACAACAG---CAGC.....................................................................................................................................................................................23200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAG---CAGCA---------GCA-----------------------------------ACAGCA...............................................................................................................................22200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAG---CAGCA---------GC.........................................................................................................................................................................21200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG---CAGCA---------GCA-----------------------------------ACAGCAACA............................................................................................................................22200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------AGC.......................................................................................................................................................................................................24200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCA---------------GCAAC---------------AG---C---------------AACAA---------...................................................20200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------CAGCAG---------------C------------AGCAGCAACAACAG---CAGC.....................................................................................................................................................................................26200.051001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAG---CAGCA---------GCA-----------------------------------AC...................................................................................................................................21200.051000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------CAGCAG---------------C------------AGCAGCAACAACAG---C........................................................................................................................................................................................23200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAG---CAGCA---------GCA-----------------------------------ACAGCAAC.............................................................................................................................25200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA---------------------------------------------------------------------------------ACAACAACAA---------C---------------------------------------------------------------------------AGC---.............................................................................................................................................................................................................................................................................................................21200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------ACAGCAACAGCA---------------GCAAC---------------A.....................................................................................19200.051000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------A.........................................................................................................................................................................................................22200.051001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------..........................................................................................................................................................................................................22200.051000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA---------C---------------------------------------------------------------------------AGC---A---------------ACAGC........................................................................................................................................................................................................................................................................................19200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------A.........................................................................................................................................................................................................20200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAG---CAGCA---------GCA-----------------------------------ACAG.................................................................................................................................20200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------AGCAGCA...................................................................................................................................................................................................23200.051000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAG---CAGCA---------GCA-----------------------------------ACA..................................................................................................................................18200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------C---------------------------------------------------------------------------AGC---A---------------ACAGCA---------G---------------------------------CAGCAG---------------C------------..........................................................................................................................................................................................................20200.051010000
droBip1
GCGGCCCAGT------------------TCAA--C------GG--------------------------C-----------------CAGGATGGCCGACCACCATCCTCCA--------------------------------------------------G---CAG--CAGC-----------------------------------GG---C---AG---------------------------------------------------------CCAGCGCGGAT-CC--------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------TCCCGCCGGCAG---CCCTGCCCCCACCGTCGCTCAGCTCCCAGCAGCAG------------C-A---G------------------------------------------------------------------------------------CA---GGCC------CAGC---------------A---------------------------------------------------------ACAGCAGCAGCA---------------------------A---------------------------------CAACAA---------------CAACA---------GCA---------------ACAACAACAGTCCCAGC-----------------------------------AGCA------------------------GCAGCAGCAAC------AG---T---------CC---CAG------------CAGCAG---CAA----------------CAGCA-------------GCAGCSizeHit CountTotal NormTotal
No Reads
droKik1
CCAGGT-------------------------------------------GC----------AGCAGCAGC------------------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCCA------------------------------------GCCGCAGCAGC-------------------------------------------------------------------------------------------------------------------------AGC----CTATCCAGGTGCAGCAGCAG---------CCTATCCAGGTGCAGCAGCAGCCTGTCCAGCCGCAGCACCAGCGTATCCAGCAGCCACTCCAACAGCAACAACAG---------C---------------------------------------------------------------------------------A---------------ACTTCA---------G---------CAGCAGCAGCAGCAACTTTATAAG---CAG---------------CA------------ACAG------------CAACT---------TCAAC-----------------------------------AGCA------------------------GCAAATGCAGCAAGTTCAG---CAGCAG---------CAA------------CTTCAT---CAG----------------CAGCA-------------ACAGCSizeHit CountTotal NormTotal
No Reads
droFic1
TGGTCGCCAT-------------G--------CC------------------------------------------------------------------------------C-AGCCAG------------GTTGCA------T--CGAGCACCGGAA-------CT-----CCTACCCCAGCC------ACCGGCGTCATTCATCATCACCA-----------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------------------------------AACAGCAG---------------------------------------------------------------------C-AGCAAC---------------------------------------------------------------------------TCCAGCACCAGCATCAGCAGCAGCAGCAG------------CA---------------------------------------------------------ACAGCAGCATCA---------------------------A---------------------------CAACAG---CAG---------------CA------------TCAG------------CAACT---------CCAACA---------------------------TCAAC-----AGCAGCATCAGC------------------------------AG---CAGCAG---------CAT------------CAGCAG---CAT----------------CAACA-------------GCAGCSizeHit CountTotal NormTotal
No Reads
droEle1
CAGCCCCAGC----------------------AT------------------------------------------------------------------------------C-----------------------------------------------------------AGC-----------------------------------AT---CAGCTTACCTTGAACAATCGCGT----------------------------------------------------C-AAGAGCCAGC---AGAACTTCCAGCAAACGCTGCGCAT--GCAGCAGATGATGGCTC-----------------------------------------------------------------------------------CATCGATGC------------------------------------------------------------------------------------CCAAC-A---------------------------------------------------------------------------------------------TCAGCAACA------T------------GT------------------------------ACCA-----------------------TCACCAGCAGCA------------ACAACA---------G------------------------------------CAA---------------C------------ATCTG------------CCCCT---------CCAGCA---------------------------GCAGC-----AGCAGCAGCAGC------A---GCAAC---------------AG------------------CAGCAA---------C--------CAG------------TGATGAGCA-------------GCAGCSizeHit CountTotal NormTotal
No Reads
droRho1
CAGTTCGA--------------------------C------GATCCCGTGGAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCTGGCCTCGTTGGAGTTCAGCGCCGGTTCCACGGGCAAATCATC-----------------------GCTAACGGACAACTTTTTGA-----------------------TGCAGCAGCATCTGATGCAGCCCGCCG---GACC------CCA---------------GCAA-------------------CAGCAGC------------------------------------------------------------------------------AGCAGCAACAA---------CCCTTTGGCCATCAGCA---------------------------------------------------------------------------------ACAGCA---------G------------------------------------------------------CAGCA------ACAACAACAACAACAA---CAGCA---------ACA-----------------------------------ACAACA---A---------------------------------------------CAA---------CAGCAG------------CAG---CAG----------------CAGCA-------------GCATASizeHit CountTotal NormTotal
No Reads
droBia1
ACAGTT-------------------------------------------GC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACGGCAATGGCAGTCAGAATCCCTTC-A---TCAAGG---AGAACTACTGGGAGGCGCCGCCCACCAGGGCCAGCTTGCTGCTC----------------------C----------ACTC-----------------------GCCCACGGAGTACTCTGAGG-----------------------AGCAACAGCA---------------------------------------------------G---------------C-AGCAGCAGCAACAG---------C------AA------------------------------------------------------CAGCAACAGCAG---------CAG------------CA---------------------------------------------------------------------------------ACAGCA---------G------------------------------------CAG---CAACAGCAGCAGCA------------AC---------AG---CAGCA---------GCA-----------------------------------ACAGCA---A---------------------CA---------------G---CAGCAG---------CAA------------CAGCAG---CAG----------------CAGCAACATATGCATGCCTCAGCSizeHit CountTotal NormTotal
No Reads
droTak1
TTC---CAGA---------------------------------------CC-------------------------------------------------------------------------------------------------------------------------AGC-----------------------------------GG---CAACTTTCTGCGACCGATCGCCTTCAAGCCGATTCCATTTGAGCCGGACTATC---------------------------------------------------------------------------------------------------------------------------------------------GCATC--------GCCTGCCAGC--------------------AGCAGCAGCA---------------------------------------------------G---------------C-ACCAGCAGCAATTG---------C------AG------------------------------------------------------TTGCAACAGCAG---------CAG------------CA---------------------------------------------------------ACAGCTGCAGCT------------GCAACA---------C------------------------------------CAC---------------CAACA---------G---------------CAGCA---------GCA-----------------------------------ACAGCA---------------ACAGCAGCAGCAACA------------A------CAGCAACACCAACAG---------------CAA---CAT----------------CAGGC-------------GCTGCSizeHit CountTotal NormTotal
No Reads
droEug1
CCGCC-CAGC----------------------AT------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------AGCAAC---AG---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCAGTGGC-------------------------------------------------------------------------------------------------------------------------TGC----CCATC-AGCAGCAGCAACAG---------C------AGTTGCAGCAGCAGCAA---CAACTGCTGCAGTTGTCCATCCAGCAGG---------------------------------------------------------------------------------------------CAGCTCACCATCATCAGCAGGA------------GCAGCA---------T------------------------------------CGC---------------CAACA---------G---------------CAGCA---------ACA-----------------------------------GCAACA---------------TCAGCAGCAACAACA------------A------CAGCAACATCATCAGCAG------------CAA---CAG----------------CAGGG-------------TCATCSizeHit CountTotal NormTotal
No Reads
dm3
CGGCAGCAGC----------------------AA------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------ACTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCAGCAGTAATGGCAACGAG------------------------------------------------------------------------------------------------------------CAGCACTCCCAGC-AGCAACA---------------------------------------------------------------------------------------TCTG---------C---------------AGCTGCAGCAGCAGCAACAGCAGCATGCCCA---------------------------GCCAAACGAGTA------------CCAACAGTTGCTGCAGCATCCCCACCATCACTATCAGCAACACTA-CAG---CGG---------------C------------AACAA------------CAACA---------CCAGCG---------------------------GCAAC-----AACAGCAATAGC------------------------------A---GC---------------AACAC--GCAGCAATACCAC---CAG----------------AGACA-------------GCAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGAG------------------------------------------------------------------------------------------------------------CAGCACTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCATGCCCA---------------------------GCC..................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGG---------------C------------AACAA------------CAACA---------CCAGCG---------------------------G.........................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAGCAGCAGCAACAGCA.........................................................................................................................................................................................................................................................................................................................................................2270.2920000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------------CAACA---------CCAGCG---------------------------GC........................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGCAGCAACAGCAGC.......................................................................................................................................................................................................................................................................................................................................................21180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAGCAGCA......................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAGCAGCA......................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGATTCCTGG-------------G-------------------------CC----------ACCAGCAGGCCCTGTCGCCGCATCCA-----------------------C-----ACCG------------G--------------------------------------CTGTCGTCCTCGTCGACGCCACC--AGCTTTGC---------A-----------------------------------------------------------------------------------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCCCTGC-AGCAGCAGCAACAG---------C------ACATGCT---------------------------------------------------------GCAGCAGCACCAGC---------------T------------------------------------------------------------------------------------------------A------------------------------------CAG---CAACAGCTGCAGCATCA---GCAGCAGCAA------------CAACA---------TCA-----------------------------------------------------------------------------------A---CAGCAA---------TTG------------CAGCAG---CAG----------------CAGCA-------------ACAG-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AGGGCTCAGG----------------------CT------------------------------------------------------------------------------C------------------AGTACCAGCAGCAGCAACAGCAGCAGTTCGAGGTACT-----GCAGGCCCAGGC--------------------------------------AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GGA---------------G------CAACACTTG---C-A---G---C---------------------------------A------------GCAACACCAGCAGCACCAGT------------TGCAGCTCTTG---------C---------------A---------------------------------------------------------ACTGCAGCAGCA---------------------------G---------------------------------CAACAG---------------CAGTT---------GCA---------------GCA---------ACC---AGTGCAGCACCATCCGCCGCAGCAGCTGCAAC-----AACAGCAGCAGC------------------------------A---GC---------------AG---------------------CAGGTGGCTCAG---GATCCAGCA-------------GCAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC------------------------------A---GC---------------AG---------------------CAGGTGGC..................................1820.5010001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----AACAGCAGCAGC------------------------------A---G.................................................................................18200.1020020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----AACAGCAGCAGC------------------------------A---GC---------------AG---------------------C.........................................22200.0511000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-----AACAGCAGCAGC------------------------------A---GC---------------A................................................................19200.0511000
.......................................................................................................................................CCAGCAGCAGCAACAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100
droYak3
CGGCTCCCGT----------------------CC------------------------------------------------------------------------------C------------------GGTTCCAGTTCCAGTTCCAGTTGCAGAATCTGGC-CAG-----CA--------------------------------GAAGC------AG---------------------------------------------------------CCAT-----AT-CC--------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------TACAGCCAGCAC---CACC------ACG---------------GCAG-------------------CACCAGC------------------------------------------------------------------------------AGCAGCATGTG---------C---------------A---------------------------------------------------------ACACCAGCAGCAGCCACACTTGCAACACCA---------T------------------------------GAG---CTG---------------C------------------------AACACCACCA---------CCACC--------------------------------------A---GCA------------------------------------G------------------CAGCAGCAA------CAGCAG---CAG----------------CATCC-------------ACCACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------CAGCAGCAA------CAGCAG---CAG----------------CATC...................23180.06100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------CAGCAGCAA------CAGCAG---CAG----------------.......................19200.05101000000000
droEre2
CCAAAACAGTCAGGGCGGACCACAGATACCGG--C--------------GC----------ACCAGCATC------------------------------------------C-ACCCAG------------CTTGCA------T--CA-------------G---CAA--CAGC-----------------------------------AG---C---AA---------------------------------------------------------CCACC--------------------GCCTCCCTCGCAGCAGCAGCAGCAGCT--GCATCAGCTCAAG-------------------------------------------------------------------------------------------------------------------------------------TCCC---C------GCA---------------G----------------------------CAACAC---------C------AG------------------------------------------------------CAGCAGCTGCAG---------CA------------------------------------------------------------------------GCACCAGCAGCA------------GCAACA---------T---------------------------CACCAG---CAG---------------CAACAGCA---GCAG------------------CA---------GCA-----------------------------------TCACCAGCAGCA---------------GCAAC---------------AG---CAGCAG---------CAA------------CATCAT---CAG----------------CAGCA-------------ACAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------TCACCAGCAGCA---------------GCAAC---------------AG---C................................................................................2150.2010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------------------CA---------GCA-----------------------------------TCACCAGCAGCA---------------..........................................................................................................2170.1410000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------CAACAGCA---GCAG------------------CA---------GCA-----------------------------------TCA..................................................................................................................................22170.0610000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAG---CAG---------------CAACAGCA---GCA.........................................................................................................................................................................................................20200.0510000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------------GCAAC---------------AG---CAGCAG---------C.................................................................18200.0511000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------CAACAGCA---GCAG------------------CA---------GCA-----------------------------------TC...................................................................................................................................20200.0510000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------AG---CAGCAG---------CAA------------CATCA..............................................18200.0510000100

Generated: 05/17/2015 at 11:38 PM