ID:

dwi_648

 Coordinate:

scf2_1100000004511:8053529-8053676 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.8 -21.7 -21.7

Flybase annnotation

CDS [Dwil\GK16738-cds]; exon [dwil_GLEANR_17098:9]; exon [dwil_GLEANR_17098:10]; CDS [Dwil\GK16738-cds]; intron [Dwil\GK16738-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATTCTAACCAGTACTAACCCAGAGCAGACGCTGACGTCAACGCAAACAGGTAAGGTGCCAGCAGCCGCTTAGTTAATTAAAAATGTGTTGCCTACTTTTATGTGTGTCATTTTCATACATTTTGCAAAAATTGTGTTGCCTACTTACAAAGCATATAAATGTTGTTCTCTCACTTAATACATTTCCTCGCCCTTTAGATCTCGATAATGATGGCGATAAACAATTGCTGCTGCAACTGAAACGTGAT
**************************************************..((((.((..(((((.((................)))))))........(((((((.......)))))))........((.(((((((...........(((((....)))))...........))))))).))....))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M020
head
 M045
female body
 V118
embryo
....................CAGAGCAGACGCTGACGTCAACGCA........................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0
.....................................................................................................................................................................................................GATCTCGATAATGATGGCG................................ 19 0 1 2.00 2 0 2 0 0
.......................AGCAGACGCTGACGTCAACGC............................................................................................................................................................................................................ 21 0 1 2.00 2 0 2 0 0
.................................................................................................................................................................................................AACAGATCTCGATAATGATGGC................................. 22 3 1 2.00 2 0 2 0 0
.................ACCCAGAGCAGACGCTGACGT.................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
....CTAACCAGTACTAACCCAGAG............................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................AGATCTCGATAATGATGGCG................................ 20 0 1 1.00 1 0 1 0 0
.ATTCTAACCAGTACTAACCCA.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0
...........GTACTAACCCAGAGCAGACGCTGA..................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0
................AACCCAGAGCAGACGCTGACGTCAAC.............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
......AACCAGTACTAACCCAGAG............................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1
...........................................................................................................................................................................................................GATAATGATGGCGATAAACAAT....................... 22 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................................................TAAACAATTGCTGCTGCAACTG......... 22 0 1 1.00 1 0 1 0 0
........................................................................................................................................................................................................CTCGATAATGATGGCGATA............................. 19 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................ATAATGATGGCGATAAACA......................... 19 0 1 1.00 1 0 0 1 0
.......................AGCAGACGCTGACGTCAACGCA........................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
..TTCTAACCAGTACTAACCCAGAGCA............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
......................GAGCAGACGCTGACGTCAACGCA........................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0
...................................................................................................................................................................................................................................CTGCTGCAACTGAAACGT... 18 0 1 1.00 1 0 0 0 1
.............GCTAGCCCGGAGCAGACGCTG...................................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 1 0
.....................................................................................................................................................................................................GATCTCGATAATGATGGCGAT.............................. 21 0 1 1.00 1 1 0 0 0
......................................CAACGCAAACAGGTAAGGTGC............................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0
....................................................................................................................................................................................................AGATCTCGATAATGATGGCA................................ 20 1 1 1.00 1 0 1 0 0
............................................................................................................................................................................ACTTAATACATTTCCTCGCCCTTTAG.................................................. 26 0 1 1.00 1 0 0 0 1
.....................................................................................................................................................................................................GATCTCGATAATGATGGCGATAAACA......................... 26 0 1 1.00 1 1 0 0 0
...TCCAACCAGGACTAACCCA.................................................................................................................................................................................................................................. 19 2 3 0.67 2 0 0 2 0
....................CAGAGCGAACGCTGGCGTC................................................................................................................................................................................................................. 19 3 17 0.18 3 3 0 0 0
......................................................GGTGCCAGCAGCCGGTAATT.............................................................................................................................................................................. 20 3 7 0.14 1 0 0 1 0
..................................................GTAAGGTGCGTGCAGCGG.................................................................................................................................................................................... 18 3 20 0.10 2 0 0 2 0
..................................................CTAACGTGCCAGCAGCCGCG.................................................................................................................................................................................. 20 3 13 0.08 1 0 0 1 0
.....................................................ACGTGCCAGCAGCCGGTAA................................................................................................................................................................................ 19 3 16 0.06 1 0 0 1 0
....................CAGAGCAAACGCTGGCGGC................................................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0
......................................................GGTGCCAGCAGCCGGTAAT............................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0
.......................................................GTGCCAGCAGCCGCGTCCT.............................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

TTAAGATTGGTCATGATTGGGTCTCGTCTGCGACTGCAGTTGCGTTTGTCCATTCCACGGTCGTCGGCGAATCAATTAATTTTTACACAACGGATGAAAATACACACAGTAAAAGTATGTAAAACGTTTTTAACACAACGGATGAATGTTTCGTATATTTACAACAAGAGAGTGAATTATGTAAAGGAGCGGGAAATCTAGAGCTATTACTACCGCTATTTGTTAACGACGACGTTGACTTTGCACTA
**************************************************..((((.((..(((((.((................)))))))........(((((((.......)))))))........((.(((((((...........(((((....)))))...........))))))).))....))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
 V118
embryo
 M020
head
..............................................................................................................................................................................................GGGAAATCTAGAGCTATTAC...................................... 20 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................................GACGACGTTGACTTTGCACTA 21 0 1 1.00 1 0 1 0 0
..................................................................................TTACACAACGGATGAAAATACACA.............................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
.......................................................................................CGACGGATGTAAATACACACAAT.......................................................................................................................................... 23 3 1 1.00 1 1 0 0 0
...........................................................................................................................................................................................AGCGGGAAATCTAGAGCTATTAC...................................... 23 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................TATGTAAAGGAGCGGGAAATC.................................................. 21 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................CAAGAGAGTGAATTATGTAAA............................................................... 21 0 1 1.00 1 0 1 0 0
..........................................................GCTCGTGGGCGAAACAATTA.......................................................................................................................................................................... 20 3 3 0.33 1 0 1 0 0
...AGGTTGGTCCTGATTGGG................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 1 0 0
.........................................................................................................................................ACGGATCATTGCTTCGTAT............................................................................................ 19 3 10 0.10 1 0 0 1 0
...............................................................................................................................................................................ACTTTGTCAAGGAGCGGGA...................................................... 19 3 20 0.05 1 0 0 0 1
........................................................ACGGCCGTAGGCGATTCA.............................................................................................................................................................................. 18 3 20 0.05 1 0 1 0 0
.................................................................................................................................................................................................................................ATAACGACGTTGACTTTG..... 18 2 20 0.05 1 0 0 1 0
.....................................................CCTACGGTCGTCGGCGAAA................................................................................................................................................................................ 19 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004511:8053479-8053726 - dwi_648 AATTCTAACCAGTACTAACCCAGAGCAGACGCT---------GA------CGTCAACG------CAAACAGGTAAGGTGC-CAG-CA-GCC-------GCT---------------------------------------------------TA----------G----------T-TAATTAA---------AAA------------------TGTGTTGCCTACTTTTATGTGTGTCATTTT-------CATAC-ATTTTGC-----AAAAATTGTGTTGCCTACTTACAAAGCATA-----------------------------T--------AAATG-------------------TTGTTC----TCTCACTTAATACATTTCCTC--GC--CCTTTAGATCTCGATAATGATGGCGATAAACAA------------TTGCTGCTGCAACTGAAACGTGAT
droVir3 scaffold_13049:6458733-6459013 + dvi_18665 AACCCTAACCAGTACTAACCCAGAGCCACAGCC---------TC---AAGCAGCTATGGAT---GCGACAGGTAGGT-GCAGCT--------------TTT--ACA--------AA-A----------------TACG----------TTGCCTA----------CTTTTAAGAGC---GCCAC---------ATGA--------------AAATGCATTGCCTACTTTCAAACGCAGCCTCAA-------ACTAA-ACATCAAATT----TGCTGCCGTTGCACACTTCTCAGCGCCATC-GA-A----A----------------A---------AAGCCCGTTCCCCAAATTTAAAAGTCATTTTC----T--CT--TTTTGA---------T--CACATAGATCTGG------AGG---ACAAGGAA------------ATGTTAATGCAGCTGAAACGCGAT
droMoj3 scaffold_6680:4773085-4773256 + AACCCTAACCAGTACTAACCAAGAGCCTC---C---------AA------CAGCCATGGAA---GCAACAGGTAGGT-GCAGCT--------------TCTATTTGAACTAAAAAA-A----------------ATTG----------TAGCATA----------CTTTTCAGAGCC--GCAAAAAGCCAGCGCTTCTCACATTCTATATCAAATATGT-------------------------------------------------------------TGCATACTTTCAAGCGCTGC--AA-------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAT
droGri2 scaffold_9452:2788-3056 + AACCCTAACCAGTACTAACCCAGAACTACCACAACAGTTGCCTCCACTACAAGCTATGGAT---ACAACAGGTAGGT-TTTT----T-----------AAG--CT----------------------------------------------------------------------T---TCAGC---------GAGA--------------A--ATTGTTGCATGCTTTCAGGCGCTGCCACAA-------AATCC---ATCATTTTACTCGT-CGCTGTTGCATTCTTTTCTGTGTCATTCGA-A----ACAAAACA-------GA-TGTATTC------TAGCT--------TCTAT--------TG----A--CA--ATTTGCACT-TTTTGT---ACACAGATCTGGA------GG---ATAAGGAA------------ATGCTAATGCAACTGAAACGTGAT
dp5 XR_group8:8798177-8798424 - AACCCTAACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTGC------------------------------------------------------------------------------------------------------------------CG------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGAC-AT---G-TCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---CA-TACCC--------CTAGGGA--T---------AAGTGTGCTATTACTATACAATTGTTGTTC----TCCC--------------------C--CACACAGATCTGGACAGCGAAG---GGAAGCAGCAACAGCAGCTGCTGCAGCTGCAGCTGAAGCGCGAC
droPer2 scaffold_50:408031-408278 + AACCCTAACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTGC------------------------------------------------------------------------------------------------------------------CG------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGAC-AT---G-TCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---CA-TACCC--------CCAGGGA--T---------AAGTGTGCTATTACTATACAATTGTTGTTC----TCCC--------------------C--CACACAGATCTGGACAGCGAGG---GGAAGCAGCAACAACAGCTGCTGCAGCTGCAGCTGAAGCGCGAC
droAna3 scaffold_13337:7861390-7861651 - AAACCTAACCACTACTAACCCAGAGCTGCTGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGAC-TC-----------G--------------------------------------ATCTCTCTCACCTGTCC----------GTT--------C-CTCTCAC---------C--------------------TGTGTTGCATACTTTCGCGCATAGAAA----------CTCGA-ACATAGCATTGCGCCGGCGCCACTGCATACCTTTGAGAGCTTC--GA-T-C--T-----------------T--------TAATTTTCT------C--------------TAAT--T--TC--TTTCAATTA-TT--AA--CTCACAGATGTAGAGAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAAAGGGAC
droBip1 scf7180000396541:15953-16214 - AAACCTAACCACTACTAACACAGAGCTGCAGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGAC-GC-----------GAT--CT------------------------------CTCT----CTCACCTGTCC----------ATA--------C-CTCTCAC---------C--------------------TTTGTTGCATACTTTCGCGCATAGAAG----------C-TCAATCATGGCATTGCGCCGGCGCCACTGCATACCTTTGAGGGCTCT--GT-A-C--T---------------T-T--------GATTTTATT---------------------TA----A--TT--TTTTCCTAA-TC--AA--CTCACAGATGTAGAAAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAACGGGAC
droKik1 scf7180000302474:176803-177101 - AACCCTAACCAGTACTAACCCCGAGCTGCTGCC---------GC------GTCCCGTGGAT---CCGTCAGGTGGGT-CTAGCC--------------ACT--CCT---------AAC----------------TCTCT----CTC--TCTCTCCCTCTCACCTG----------C---CTCAC---------CTGTGTGTAT--ATTCTCACCTGTGTTGCATACTCTCAAGCGCCGCCAGGT-------CAACC-ACATTGCATTGCGTCTGCGCCGCTGCATACTTTTGAGTGCCGTTTCA-A----AAAAGAATTTAGAAT--T---------AAATGTAAAGTTTCTATCCAA-------------------------------------T--CCCTCAGATCTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTTCAGCTGAAGCGGGAC
droFic1 scf7180000452451:99789-100064 - CACCCTAACCACTACTAACCCAGAGCTGCCGCC---------GC------GTCCCGTGGAT---CCTTCAGGTGGGT-CCTGAC-CC-----------TCA--CT-----T----AAC-----------------CCTT----CTC----------AGTCGCCCGTT--------T-TCCTCAC---------CTG------------------TGTGTTGCATACTCGCAAGCGCCGCCGAAAG-A----CATCC-ACATCGCATTGCGCATCTGCCACTGCATACTTTTGAGGGTTCC--TA-T-A--A--------------TA-A--------GAATGGGTT---------------------TA----A--CT--TTGTGGTAT-TCGTGT--ATCCTAGATGTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGCGGGAC
droEle1 scf7180000490564:5319-5588 + AACCCTAACCAGTACTAACCCAGATCTGCTGCC---------GC------GTCCTGTGGAT---CCTTCAGGTGGGT-CTCAAC-CC-----------TAG--C------------------------------CCCTT----CTCACTCACCC----------CTT-C------T-CACTCAC---------CTG------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAA-AA---CACCC-ACATTGCATTGCGCACCTGCCGCTGCATACTTTCGAGAGCTGA--AAAT-C--A--------------TA-T--------GAATTGTGT---------------------TA----A--CT--TTT----TG-TTA-AT--ATCGCAGATATGGAGCACGAGG---ACAAGCAG------------CTGCTGCAGCAGCTGAAGCGGGAC
droRho1 scf7180000766314:12796-13063 + AACCCTAACCAGTACTAACCCAGAGCAGCTGCC---------GT------GCCCCGCGGAT---CCTTCAGGTGGGT-CCTAGC--------------------------------------------------CCCTT----CTCACCCACCC----------TCG--------T-CTCTCAC---------CTG------------------TGTGTTGCATACTCGCAAGCGCCGCCACCAA-A----CATCC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTCGAGGGCTAACTGA-A-A--T--------------AA-T--------GAATTGTGT---------------------TA----A--CT--TTGGGTTTG-TTATGT--ATCGCAGATATGGAGAGCGAGG---ACAAGCAT------------CTGCTGCTGCAGCTGAAGCGGGAC
droBia1 scf7180000300910:2425907-2426180 - AACCCTAACCAGTACTAACCCAGAGCTG---CC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCGATCTCGAACTCAGGCTAAA--CCA----T----AAC-----------------------------------C----------TTA--------A-CCCTCAC---------CTT------------------TGTGTTGCATACTCTCGAGCGCCGCCAAAA-------CATCC-ACATTGCATTGCGCACCTGCCACTGCATACTTTCGAGGGCTGA--GA-TACTTT--------------G--A--------GTATGGGTT---------------------TG----A--CT--TTATGATCT-TTATGTATATCACAGATGTGGACAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGAC
droTak1 scf7180000415356:437499-437767 - AACCCTAACCAGTACTAACCCAGAGCTGCTGCC------------------------GGAT---CCTTCAGGTGGGT-CGCAAA-CC-----------AAA--CCT----A----AAA----------------CCCCTCCC-----------CCAACTCACCTG---------------TCAC---------CTG------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAACATACACATCC-CCATTGCATTGCGCCTCTGCCGCTGCATACTTTCGAGGGCCCA--GA-T-A--T---------------T-T----GTAAATATTATAT---------------------TA----A--CT--TTATGATT------CC--ACAACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGAC
dm3 chr3L:8780392-8780665 + AACCCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAAC-CT-----------AAA--CCT----T----AAC----------------TCCATTCC--------------ATTCACCTG----------T-CTCTCAC---------CTG------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATTC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGAGTTAA--GA-T-T--T--------------GA-T--------GAATGGGCT---------------------TA----A--CG--TTACGTTTG-TTATGT--ATCACAGATATGGAAAGCGAGG---ATCAGCAG------------CTGCTCCTCCAGCTGAAGCGGGAC
droSim2 3l:8569704-8569976 + dsi_14956 AACCCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAAC-CT-----------AAA--CCT----T----AAC----------------TCCAT-CC--------------ATTCACCTG----------T-CCCTCAC---------CTG------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-T--T--------------GA-T--------GAATGGGCT---------------------TA----A--CC--TTTCGATTG-TTATGT--ATCACAGATATGGAAAGCGAGG---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGAC
droSec2 scaffold_0:1057607-1057880 + AACCCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAAC-CT-----------AAA--CCT----T----AAC----------------TCCATTCC--------------ATTCACCTG----------T-CTCTCAC---------CTG------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-T--T--------------GA-T--------GAATGGGCT---------------------TA----A--CC--TTACGATTG-TTATGT--ATCACAGATATGGAGAGCGAGA---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGAC
droYak3 3L:3129103-3129393 - TACCCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCCGTGGAT---CCTACAGGTGGGT-CTCAAC-CT-----------AAA--CCG----T----AACCTTAACCACACCCCATTCCATTCC--------------ATTCACCTG----------T-CTCTCAC---------CTG------------------TGTGTTGCATACTTGCGAGCGCCGCCAATA-------CATCC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAC--GA-T-T--T--------------GA-T--------GAATGGGCTTA--------------------A----A--CC--TTACGATTG-TTATGT--ATCACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGAC
droEre2 scaffold_4784:5259431-5259695 - TACCCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCGCCGGAT---CCTACAGGTGGGT-CTCAAC-CT-----------AAG--CCC----T----AAC----------------CCCATGCC--------------ATTTACCTG-----------------------------TG------------------TGTGTTGCATACTTGCGAGCGCCGCCATTA-------CATCC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-C--T--------------GA-T--------GAGTGTGCC---------------------TA----A--CT--TTACGCTGG-TTATGT--ATCGCAGATATGGACAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AATTCTAACCAGTACTAACCCAGAGCAGACGCT---------GA------CGTCAACG------CAAACAGGTAAGGTGC-CAG-CA-GCC-------GCT---------------------------------------------------TA----------G----------T-TAATTAA---------AAA------------------TGTGTTGCCTACTTTTATGTGTGTCATTTT-------CATAC-ATTTTGC-----AAAAATTGTGTTGCCTACTTACAAAGCATA-----------------------------T--------AAATG-------------------TTGTTC----TCTCACTTAATACATTTCCTC--GC--CCTTTAGATCTCGATAATGATGGCGATAAACAA------------TTGCTGCTGCAACTGAAACGTGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................CAGAGCAGACGCT---------GA------CGTCAACG------CA.................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200
....................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGATAATGATGGCG............................................1912.00220000
.......................AGCAGACGCT---------GA------CGTCAACG------C..................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000
.................ACCCAGAGCAGACGCT---------GA------CGT..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
....CTAACCAGTACTAACCCAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTCGATAATGATGGCG............................................2011.00110000
.ATTCTAACCAGTACTAACCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........GTACTAACCCAGAGCAGACGCT---------GA------.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
................AACCCAGAGCAGACGCT---------GA------CGTCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
......AACCAGTACTAACCCAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................GATAATGATGGCGATAAACAA------------T.......................2211.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAA------------TTGCTGCTGCAACTG.........2211.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CTCGATAATGATGGCGATA.........................................1911.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGATGGCGATAAACA.....................................1911.00101000
.......................AGCAGACGCT---------GA------CGTCAACG------CA.................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..TTCTAACCAGTACTAACCCAGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
......................GAGCAGACGCT---------GA------CGTCAACG------CA.................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCAACTGAAACGT...1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGATAATGATGGCGAT..........................................2111.00100100
.....................................................CAACG------CAAACAGGTAAGGTGC-..................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTCGATAATGATGGCA............................................2011.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................ACTTAATACATTTCCTC--GC--CCTTTAG..............................................................2611.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGATAATGATGGCGATAAACA.....................................2611.00100100
droVir3
AACCCTAACCAGTACTAACCCAGAGCCACAGCC---------TC---AAGCAGCTATGGAT---GCGACAGGTAGGT-GCAGCT--------------TTT--ACA--------AA-A----------------TACG----------TTGCCTA----------CTTTTAAGAGC---GCCAC---------ATGA--------------AAATGCATTGCCTACTTTCAAACGCAGCCTCAA-------ACTAA-ACATCAAATT----TGCTGCCGTTGCACACTTCTCAGCGCCATC-GA-A----A----------------A---------AAGCCCGTTCCCCAAATTTAAAAGTCATTTTC----T--CT--TTTTGA---------T--CACATAGATCTGG------AGG---ACAAGGAA------------ATGTTAATGCAGCTGAAACGCGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACG....1812.002002000000000000000000000000000000000000000000000000000000000000
.......ACCAGTACTAACCCAGAGCCACAGCC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000001000100000000000000000000000000000000000000000
..........AGTACTAACCCAGAGCCACAGCC---------TC---A...................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACGCG..2012.002001000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................A------------ATGTTAATGCAGCTGAAACGCGAT2511.001000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAGCTGAAACGCGAT1911.001001000000000000000000000000000000000000000000000000000000000000
....................CAGAGCCACAGCC---------TC---AAGCAGCTATG.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAA------------ATGTTAATGCAGCT..........2111.001001000000000000000000000000000000000000000000000000000000000000
...........GTACTAACCCAGAGCCACAGCC---------TC---AAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........CAGTACTAACCCAGAGCCACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
............TACTAACCCAGAGCCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
.....TAACCAGTACTAACCCAGAGCCACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACGC...1911.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGCAGCTGAAACGCG..1911.001001000000000000000000000000000000000000000000000000000000000000
................AACCCAGAGCCACAGCC---------TC---AAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
...........................ACAGCC---------TC---AAGCAGCTATGGAT---GC.................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
.......................AGCCACAGCC---------TC---AAGCAGCTAT..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
.ACCCTAACCAGTACTAACCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CTGG------AGG---ACAAGGAA------------ATG.....................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGG------AGG---ACAAGGAA------------AT......................1911.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GG---ACAAGGAA------------ATGTTAATGCAGCTGAA.......2711.001000000000000000000100000000000000000000000000000000000000000000
...........GTACTAACCCAGAGCCACAGCC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
....................CAGAGCCACAGCC---------TC---AAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.................ACCCAGAGCCACAGCC---------TC---AAGC................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AACCCTAACCAGTACTAACCAAGAGCCTC---C---------AA------CAGCCATGGAA---GCAACAGGTAGGT-GCAGCT--------------TCTATTTGAACTAAAAAA-A----------------ATTG----------TAGCATA----------CTTTTCAGAGCC--GCAAAAAGCCAGCGCTTCTCACATTCTATATCAAATATGT-------------------------------------------------------------TGCATACTTTCAAGCGCTGC--AA-------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............ACTAACCAAGAGCCTC---C---------AA------CAG..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......AACCAGTACTAACCAAGAGCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droGri2
AACCCTAACCAGTACTAACCCAGAACTACCACAACAGTTGCCTCCACTACAAGCTATGGAT---ACAACAGGTAGGT-TTTT----T-----------AAG--CT----------------------------------------------------------------------T---TCAGC---------GAGA--------------A--ATTGTTGCATGCTTTCAGGCGCTGCCACAA-------AATCC---ATCATTTTACTCGT-CGCTGTTGCATTCTTTTCTGTGTCATTCGA-A----ACAAAACA-------GA-TGTATTC------TAGCT--------TCTAT--------TG----A--CA--ATTTGCACT-TTTTGT---ACACAGATCTGGA------GG---ATAAGGAA------------ATGCTAATGCAACTGAAACGTGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGA------GG---ATAAGGA.....................................2020.50101
dp5
AACCCTAACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTGC------------------------------------------------------------------------------------------------------------------CG------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGAC-AT---G-TCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---CA-TACCC--------CTAGGGA--T---------AAGTGTGCTATTACTATACAATTGTTGTTC----TCCC--------------------C--CACACAGATCTGGACAGCGAAG---GGAAGCAGCAACAGCAGCTGCTGCAGCTGCAGCTGAAGCGCGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGCAGCA..................................2616.0060000000060
....................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGCAGC...................................2513.0030000000030
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGACAGCGAAG---GGAAGCAGCA..................................2512.0020000000020
..........AGTACTAACCCCG------------------------------CTGTGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTGGACAGCGAAG---GGAAGC......................................2312.0020000000020
..................................................................................................................................................................................................................................................................................................................................................................................................................CAGATCTGGACAGCGAAG---GGAAGC......................................2412.0020000000020
..........AGTACTAACCCCG------------------------------CTGTGGATACCCC.................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGACAGCGAAG---GGAAGCAGC...................................2812.0020000000020
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAAG---GGAAGCAGC...................................2112.0020000000020
......................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGCA..................................2411.0010000000010
.........CAGTACTAACCCCG------------------------------CTGTGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............ACTAACCCCG------------------------------CTGTGGATACC...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............ACTAACCCCG------------------------------CTGTGGATACCCC.................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............TACTAACCCCG------------------------------CTGTGGATACCCCA................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CTGGACAGCGAAG---GGAAGCAGCAACAGC.............................2811.0010000000001
....................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGCA.....................................2311.0010000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGC......................................2211.0010000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGC...................................2311.0010000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGACAGCGAAG---GGAAGC......................................2511.0010000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCTGCTGCAGCT................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGACAGCGAAG---GGAAGCAGC...................................2411.0010000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGCAAC................................2611.0010000000010
..........AGTACTAACCCCG------------------------------CTGTGGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000000
...........GTACTAACCCCG------------------------------CTGTGGATACCCCA................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGCAA.................................2511.0010000000100
.................ACCCCG------------------------------CTGTGGATACCCC.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........GTACTAACCCCG------------------------------CTGTGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
AACCCTAACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTGC------------------------------------------------------------------------------------------------------------------CG------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGAC-AT---G-TCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---CA-TACCC--------CCAGGGA--T---------AAGTGTGCTATTACTATACAATTGTTGTTC----TCCC--------------------C--CACACAGATCTGGACAGCGAGG---GGAAGCAGCAACAACAGCTGCTGCAGCTGCAGCTGAAGCGCGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........AGTACTAACCCCG------------------------------CTGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........GTACTAACCCCG------------------------------CTGTGGATACC...................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...........GTACTAACCCCG------------------------------CTGTGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CTGGACAGCGAGG---GGAAGCA.....................................2011.001010000
.......ACCAGTACTAACCCCG------------------------------CTG...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGACAGCGAGG---GGAAG.......................................2411.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAGG---GGAAGCA.....................................1911.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAGG---GGAAGC......................................2211.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAGG---GGAAGCAGC...................................2111.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGACAGCGAGG---GGAAGCAGC...................................2011.001010000
...........GTACTAACCCCG------------------------------CTGTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droAna3
AAACCTAACCACTACTAACCCAGAGCTGCTGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGAC-TC-----------G--------------------------------------ATCTCTCTCACCTGTCC----------GTT--------C-CTCTCAC---------C--------------------TGTGTTGCATACTTTCGCGCATAGAAA----------CTCGA-ACATAGCATTGCGCCGGCGCCACTGCATACCTTTGAGAGCTTC--GA-T-C--T-----------------T--------TAATTTTCT------C--------------TAAT--T--TC--TTTCAATTA-TT--AA--CTCACAGATGTAGAGAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAAAGGGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................AGCTGCTGCC---------GC------TACCCGTGGAT---CCC................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGAGCGAGG---ACAAGCAG------------C.......................2212.002100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................CGAGG---ACAAGCAG------------CTGCTGATGC..............2311.001100000
...............TAACCCAGAGCTGCTGCC---------GC------TACC.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGAGCGAGG---ACAAG.......................................1811.001100000
.............ACTAACCCAGAGCTGCTGCC---------GC------TACCC............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
........................GCTGCTGCC---------GC------TACCCGTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGATGCA.............2311.001100000
..................CCCAGAGCTGCTGCC---------GC------TACCC............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.................ACCCAGAGCTGCTGCC---------GC------TACC.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.....................AGAGCTGCTGCC---------GC------TACCCGTGGAT---...................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
..................CCCAGAGCTGCTGCC---------GC------TACC.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGAT................2011.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGATGCAACTGAAAAGGGAC2311.001000010
................AACCCAGAGCTGCTGCC---------GC------TACC.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................GC------TACCCGTGGAT---CCCGCAGA...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................GAGCTGCTGCC---------GC------TACCCGTGGAT---...................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................GAGCTGCTGCC---------GC------TACCCGTGGAT---CC.................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..............CTAACCCAGAGCTGCTGCC---------GC------TACCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---ACAAGCAG------------CTGCTGATGCA.............2211.001100000
........CCACTACTAACCCAGAGCTGCTGCC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGATGC..............2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGAGAGCGAGG---ACAAG.......................................2011.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................GATGTAGAGAGCGAGG---ACAAGCAG------------CT......................2611.001100000
...CCTAACCACTACTAACCCAGAGCTGCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
......................GAGCTGCTGCC---------GC------TACCCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
......................GAGCTGCTGCC---------GC------TACCCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGAGCGAGG---ACAAGCAG------------CTGC....................2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAGCGAGG---ACAAGCAG------------CTGCTG..................2611.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAGAGCGAGG---ACAAGC......................................2011.001100000
.................ACCCAGAGCTGCTGCC---------GC------TACCCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................................................................................................................................................................................................................................................................CTTC--GA-T-C--T-----------------T--------TAATTTTCT------C--------------T...................................................................................................2111.001100000
droBip1
AAACCTAACCACTACTAACACAGAGCTGCAGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGAC-GC-----------GAT--CT------------------------------CTCT----CTCACCTGTCC----------ATA--------C-CTCTCAC---------C--------------------TTTGTTGCATACTTTCGCGCATAGAAG----------C-TCAATCATGGCATTGCGCCGGCGCCACTGCATACCTTTGAGGGCTCT--GT-A-C--T---------------T-T--------GATTTTATT---------------------TA----A--TT--TTTTCCTAA-TC--AA--CTCACAGATGTAGAAAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAACGGGACSizeHit CountTotal NormTotal
No Reads
droKik1
AACCCTAACCAGTACTAACCCCGAGCTGCTGCC---------GC------GTCCCGTGGAT---CCGTCAGGTGGGT-CTAGCC--------------ACT--CCT---------AAC----------------TCTCT----CTC--TCTCTCCCTCTCACCTG----------C---CTCAC---------CTGTGTGTAT--ATTCTCACCTGTGTTGCATACTCTCAAGCGCCGCCAGGT-------CAACC-ACATTGCATTGCGTCTGCGCCGCTGCATACTTTTGAGTGCCGTTTCA-A----AAAAGAATTTAGAAT--T---------AAATGTAAAGTTTCTATCCAA-------------------------------------T--CCCTCAGATCTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTTCAGCTGAAGCGGGACSizeHit CountTotal NormTotal
No Reads
droFic1
CACCCTAACCACTACTAACCCAGAGCTGCCGCC---------GC------GTCCCGTGGAT---CCTTCAGGTGGGT-CCTGAC-CC-----------TCA--CT-----T----AAC-----------------CCTT----CTC----------AGTCGCCCGTT--------T-TCCTCAC---------CTG------------------TGTGTTGCATACTCGCAAGCGCCGCCGAAAG-A----CATCC-ACATCGCATTGCGCATCTGCCACTGCATACTTTTGAGGGTTCC--TA-T-A--A--------------TA-A--------GAATGGGTT---------------------TA----A--CT--TTGTGGTAT-TCGTGT--ATCCTAGATGTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGCGGGACSizeHit CountTotal NormTotal
No Reads
droEle1
AACCCTAACCAGTACTAACCCAGATCTGCTGCC---------GC------GTCCTGTGGAT---CCTTCAGGTGGGT-CTCAAC-CC-----------TAG--C------------------------------CCCTT----CTCACTCACCC----------CTT-C------T-CACTCAC---------CTG------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAA-AA---CACCC-ACATTGCATTGCGCACCTGCCGCTGCATACTTTCGAGAGCTGA--AAAT-C--A--------------TA-T--------GAATTGTGT---------------------TA----A--CT--TTT----TG-TTA-AT--ATCGCAGATATGGAGCACGAGG---ACAAGCAG------------CTGCTGCAGCAGCTGAAGCGGGACSizeHit CountTotal NormTotal
No Reads
droRho1
AACCCTAACCAGTACTAACCCAGAGCAGCTGCC---------GT------GCCCCGCGGAT---CCTTCAGGTGGGT-CCTAGC--------------------------------------------------CCCTT----CTCACCCACCC----------TCG--------T-CTCTCAC---------CTG------------------TGTGTTGCATACTCGCAAGCGCCGCCACCAA-A----CATCC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTCGAGGGCTAACTGA-A-A--T--------------AA-T--------GAATTGTGT---------------------TA----A--CT--TTGGGTTTG-TTATGT--ATCGCAGATATGGAGAGCGAGG---ACAAGCAT------------CTGCTGCTGCAGCTGAAGCGGGACSizeHit CountTotal NormTotal
No Reads
droBia1
AACCCTAACCAGTACTAACCCAGAGCTG---CC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCGATCTCGAACTCAGGCTAAA--CCA----T----AAC-----------------------------------C----------TTA--------A-CCCTCAC---------CTT------------------TGTGTTGCATACTCTCGAGCGCCGCCAAAA-------CATCC-ACATTGCATTGCGCACCTGCCACTGCATACTTTCGAGGGCTGA--GA-TACTTT--------------G--A--------GTATGGGTT---------------------TG----A--CT--TTATGATCT-TTATGTATATCACAGATGTGGACAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGACSizeHit CountTotal NormTotal
No Reads
droTak1
AACCCTAACCAGTACTAACCCAGAGCTGCTGCC------------------------GGAT---CCTTCAGGTGGGT-CGCAAA-CC-----------AAA--CCT----A----AAA----------------CCCCTCCC-----------CCAACTCACCTG---------------TCAC---------CTG------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAACATACACATCC-CCATTGCATTGCGCCTCTGCCGCTGCATACTTTCGAGGGCCCA--GA-T-A--T---------------T-T----GTAAATATTATAT---------------------TA----A--CT--TTATGATT------CC--ACAACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGACSizeHit CountTotal NormTotal
No Reads
dm3
AACCCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAAC-CT-----------AAA--CCT----T----AAC----------------TCCATTCC--------------ATTCACCTG----------T-CTCTCAC---------CTG------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATTC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGAGTTAA--GA-T-T--T--------------GA-T--------GAATGGGCT---------------------TA----A--CG--TTACGTTTG-TTATGT--ATCACAGATATGGAAAGCGAGG---ATCAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..CCCTAACCAGTACTAACCCAGAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAAGCGAGG---ATCAGCAG------------CTGCT...................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGG---ATCAGCAG------------CTGCTC..................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........GTACTAACCCAGAGCTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAGG---ATCAGCAG------------CT......................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........GTACTAACCCAGAGCTGCTGCC---------GC------.................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ATCAGCAG------------CTGCTC..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCGAGG---ATCAGCAG------------CT......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TAACCCAGAGCTGCTGCC---------G........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GAGAGTTAA--GA-T-T--T--------------GA-T--------GAATGGGCT---------------------T...................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.ACCCTAACCAGTACTAACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GA-T--------GAATGGGCT---------------------TA----A--CG--T......................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ATCAGCAG------------C.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGC....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGAGCTGCTGCC---------GC------ATCCTGTGGAT---...................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAAAGCGAGG---ATCAGCA.....................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GCCGCCAATA-------CATTC-ACATTGCATTG.......................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGCC---------GC------ATCCTGTGGAT---CCTTCAGA...........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCTGCC---------GC------ATCCTGTGGAT---CCTT...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACCCAGAGCTGCTGCC---------GC------ATCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AACCCAGAGCTGCTGCC---------GC------.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........GTACTAACCCAGAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACTAACCCAGAGCTGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACCCAGAGCTGCTGCC---------GC------ATCCTGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACTAACCCAGAGCTGCTGCC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............TAACCCAGAGCTGCTGCC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGCTC..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAGCAG------------CTGCTCC.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GA-T-T--T--------------GA-T--------GAATGGGCT---------------------TA----..............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGCGAGG---ATCAGCA.....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAAGCGAGG---ATCAGCAG------------CTG.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGAGCTGCTGCC---------GC------ATCCT............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ATCAGCAG------------CTGCT...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TAA--GA-T-T--T--------------GA-T--------GAATGGGCT---------------------TA----A--CG--T......................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAGG---ATCAGCAG------------CTG.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................ATTCACCTG----------T-CTCTCAC---------CTG------------------T............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................ACTCGCGAGCGCCGCCAATA-------C.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAG------------CTGCTCCTCCAGCTGAAGC.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGCT...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAG------------CTGCTCCTCCAGCTGAAGCGGG..2911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................G---ATCAGCAG------------CTGCTCCTCC..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTTAA--GA-T-T--T--------------GA-T--------GAATGGGCT---------------------T...................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...................................................................................................................................................................................................................................................................................................................T--T--------------GA-T--------GAATGGGCT---------------------TA----A--CG--TTACGT.................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................TGCC---------GC------ATCCTGTGGAT---CCTTCAG............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CT-----------AAA--CCT----T----AAC----------------TCCATTCC--------------A......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTAA--GA-T-T--T--------------GA-T--------GAATGGGCT---------------------....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CAGATATGGAAAGCGAGG---ATC.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTCCAGCTGAAGCGG...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................CACCTG----------T-CTCTCAC---------CTG------------------TGTGTTGC.....................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ATCAGCAG------------CTG.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GGGCT---------------------TA----A--CG--TTACGTTTG-TTATGT--A....................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAGCTGAAGCGGGAC1911.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GC------ATCCTGTGGAT---CCTTCA.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCGAGG---ATCAGCAG------------CTGCTATC................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGCTGCC---------GC------ATCCTGTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGTACTAACCCAGAGCTGCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGG---ATCAGCAG------------CTGCTCC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAGCAG------------CTGC....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................GTGGAT---CCTTCAGGTGGG.......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCC---------GC------ATCCTGTGGAT---CCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ACCAGTACTAACCCAGAGCTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................TCTCAC---------CTG------------------TGTGTTGCATAC.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
............................CTGCC---------GC------ATCCTGTGGAT---CCTTCA.............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAAAGCGAGG---ATC.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................A-T-T--T--------------GA-T--------GAATGGGCT---------------------TA----A--CG--.......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................GCTGCC---------GC------ATCCTGTGGAT---CC.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAGCAG------------CTG.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCGAGG---ATCAGCAG------------CTG.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAAAGCGAGG---ATCA........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGCTCG.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGCGAGG---ATCAGCAG------------CT......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................TTTGAGAGTTAA--GA-T-T--T--------------GA-T--------GAATGG............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............................................................................................................................................................................................................................................................................ATCTGCCGCTGCATACTTTT................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAATC.....................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AACCCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAAC-CT-----------AAA--CCT----T----AAC----------------TCCAT-CC--------------ATTCACCTG----------T-CCCTCAC---------CTG------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-T--T--------------GA-T--------GAATGGGCT---------------------TA----A--CC--TTTCGATTG-TTATGT--ATCACAGATATGGAAAGCGAGG---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ACAAGCAG------------CTG.....................2512.00200000000200000000
.........................................................................................................................................................................................................................................................................................................................................................T---------------------TA----A--CC--TTTCGATTG-TTATGT--ATC..................................................................2411.00110000000000000000
...........................GCTGCC---------GC------ATCCTGTGGAT---CCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
....................CAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCT................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
...........................GCTGCC---------GC------ATCCTGTGGAT---C..................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
......................................................................................................................................................................................................................................................................................................GGCTAA--GA-T-T--T--------------GA-T--------GAATGGGC..........................................................................................................................2211.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ACAAGCAG------------CTGCTC..................2111.00101000000000000000
droSec2
AACCCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAAC-CT-----------AAA--CCT----T----AAC----------------TCCATTCC--------------ATTCACCTG----------T-CTCTCAC---------CTG------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-T--T--------------GA-T--------GAATGGGCT---------------------TA----A--CC--TTACGATTG-TTATGT--ATCACAGATATGGAGAGCGAGA---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................GAGCTGCTGCC---------GC------ATCCTGTGGAT---CC.................................................................................................................................................................................................................................................................................................................................................................................................................2612.0022000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGATATGGAGAGCGAGA---ACAAGC......................................2311.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAGCGAGA---ACAAGCAG------------C.......................2111.0011000
..........................TGCTGCC---------GC------ATCCTGTGGAT---...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
droYak3
TACCCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCCGTGGAT---CCTACAGGTGGGT-CTCAAC-CT-----------AAA--CCG----T----AACCTTAACCACACCCCATTCCATTCC--------------ATTCACCTG----------T-CTCTCAC---------CTG------------------TGTGTTGCATACTTGCGAGCGCCGCCAATA-------CATCC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAC--GA-T-T--T--------------GA-T--------GAATGGGCTTA--------------------A----A--CC--TTACGATTG-TTATGT--ATCACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................AACCCAGAGCTGCTGCC---------GC------.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAGCGAGG---ACAAGC......................................1911.00100001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAGCGAGG---ACAAGCAG------------CTGCT...................2611.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCCAACTGAAGCGGGA.2011.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAGAGCGAGG---ACAAGC......................................2211.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAGAGCGAGG---ACAAG.......................................2111.00100000010000
......................GAGCTGCTGCC---------GC------ATCCCGTGGAT---C..................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGT.................1911.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CTGCTGCTCCAACTGAAGC.....2011.00101000000000
droEre2
TACCCTAACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCGCCGGAT---CCTACAGGTGGGT-CTCAAC-CT-----------AAG--CCC----T----AAC----------------CCCATGCC--------------ATTTACCTG-----------------------------TG------------------TGTGTTGCATACTTGCGAGCGCCGCCATTA-------CATCC-ACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--GA-T-C--T--------------GA-T--------GAGTGTGCC---------------------TA----A--CT--TTACGCTGG-TTATGT--ATCGCAGATATGGACAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........GTACTAACCCAGAGCTGCTGCC---------G........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................AGATATGGACAGCGAGG---ACAAGC......................................2311.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGACAGCGAGG---ACA.........................................1911.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------CTGCTGCTCCAACTGAAGCGG...2311.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTCCAACTGAAGCG....1911.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGCTCCAAC...........2511.0011000000
..................CCCAGAGCTGCTGCC---------GC------ATC..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................TATGGACAGCGAGG---ACAAGCAG------------C.......................2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------------CTGCTGCTCCAACTGA........2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ACAAGCAG------------CTGCTGCT................2311.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGACAGCGAGG---ACAAGCA.....................................2211.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAGG---ACAAGCAG------------CT......................2211.0011000000
.....................AGAGCTGCTGCC---------GC------ATCCGCCGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ACAAGCAG------------CTGC....................1911.0010000100
.....................AGAGCTGCTGCC---------GC------ATCCGCCGG........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCGAGG---ACAAGCAG------------CTGCT...................2311.0010000010
....................CAGAGCTGCTGCC---------GC------ATCCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGACAGCGAGG---ACAAGCAG------------CTGCTGCT................2711.0011000000
...................CCAGAGCTGCTGCC---------GC------ATC..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.................ACCCAGAGCTGCTGCC---------GC------ATC..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGG---ACAAGCAG------------CTGC....................1811.0011000000
....................CAGAGCTGCTGCC---------GC------ATCCGCCGGAT---...................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..............CTAACCCAGAGCTGCTGCC---------GC------ATC..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.....TAACCAGTACTAACCCAGAGCTGCTGCC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000

Generated: 05/17/2015 at 11:36 PM