ID:

dwi_622

 Coordinate:

scf2_1100000004511:6671789-6671939 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-46.7 -46.4 -46.4 -46.4

Flybase annnotation

CDS [Dwil\GK16778-cds]; exon [dwil_GLEANR_17133:3]; intron [Dwil\GK16778-in]

Repeatable elements

NameClassFamilyStrand
R1_DYaLINER1+
(CTG)nSimple_repeatSimple_repeat+
mature
  1. scf2_1100000004511:2593411-2593430 +
  2. dwi_622  scf2_1100000004511:6671908-6671927 -
  3. scf2_1100000004511:7462568-7462587 -
  4. scf2_1100000004590:3640328-3640347 +
  5. scf2_1100000004768:489454-489473 -
  6. scf2_1100000004768:1758202-1758221 +
  7. scf2_1100000004909:7382620-7382639 +
  8. scf2_1100000004963:1561150-1561169 -
  9. scf2_1100000004963:1568877-1568896 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AACAAAAACAGCAGCATGAGCACCACCACCAACAAGAACATGGAGGCCAAACACAGTTTGCAGATGAGCAGCAGCAGCAGCAGCAGCAATTGAGACCCAAATGGTTGGAGCCGGGGGCCTTACAATGAAAATGTTTAGAGTTTTAGCACCGCAGGTGGCCACGGCAAAAATTTTTACCGGTCGATGCTGCTGCTATTGCAGGATAATGACAGCGAACAAGTGCAAAGCGTGCAGCAACAGGAGCAGGAGCA
**************************************************......((.((((...((((((((((.................((((.....((((...((((..((((......((....((((.........))))...))...)))).))))...))))......))))..)))))))))).))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V118
embryo
 V119
head
......AACAGCAGCATGAGCACC................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
......AACAGCAGCATGAGCACT................................................................................................................................................................................................................................... 18 1 2 0.50 1 1 0 0 0
................................................................................................................................................AACACCGAAGGCGGCCACGG....................................................................................... 20 3 3 0.33 1 0 1 0 0
..............................................................................................AGCCAAATGGCTGGAGCCGGC........................................................................................................................................ 21 3 3 0.33 1 1 0 0 0
..................................................................................GCAGCTATTGAGACACAAA...................................................................................................................................................... 19 2 3 0.33 1 1 0 0 0
..............................................................................................................................................................................................................................TAAAGCGTGCAGCAAAAGG.......... 19 2 3 0.33 1 0 1 0 0
.........................................................................................................................................................................................................GATAATGACAGCGAAGAT................................ 18 2 20 0.25 5 1 0 4 0
..........................................................................................................................................................................................................................AGTGCACAGCGTGCCGCCAC............. 20 3 5 0.20 1 1 0 0 0
..............................................................................................................................................................................................AGCTATTGCAGGATAATGAAC........................................ 21 3 5 0.20 1 1 0 0 0
................................CAAAACCATGGAGGCCCAAC....................................................................................................................................................................................................... 20 3 12 0.17 2 2 0 0 0
..............................................................GATGAGCAGCAGCAGCAGCA......................................................................................................................................................................... 20 0 9 0.11 1 0 0 0 1
........................................................................................................TTGGTGCCGGGGGCCATCC................................................................................................................................ 19 3 12 0.08 1 1 0 0 0
...................................................................................................AATGGTTCGCGCCGGGGCC..................................................................................................................................... 19 3 13 0.08 1 0 1 0 0
.........................................................................................................TGGACCCGGGGGCGGTAC................................................................................................................................ 18 3 17 0.06 1 1 0 0 0
.................................................................................................................................................GCACCGCACGTTGCCTCG........................................................................................ 18 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

TTGTTTTTGTCGTCGTACTCGTGGTGGTGGTTGTTCTTGTACCTCCGGTTTGTGTCAAACGTCTACTCGTCGTCGTCGTCGTCGTCGTTAACTCTGGGTTTACCAACCTCGGCCCCCGGAATGTTACTTTTACAAATCTCAAAATCGTGGCGTCCACCGGTGCCGTTTTTAAAAATGGCCAGCTACGACGACGATAACGTCCTATTACTGTCGCTTGTTCACGTTTCGCACGTCGTTGTCCTCGTCCTCGT
**************************************************......((.((((...((((((((((.................((((.....((((...((((..((((......((....((((.........))))...))...)))).))))...))))......))))..)))))))))).))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V119
head
...................CGTGGTGGTGGGTGTTCT...................................................................................................................................................................................................................... 18 1 2 11.50 23 23 0 0
..................ACGTGGTGGTGGGTGTTC....................................................................................................................................................................................................................... 18 2 20 0.65 13 13 0 0
..................ACGTGGTGGTGGGTGTTCT...................................................................................................................................................................................................................... 19 2 10 0.50 5 1 3 1
.................CACGTGGTGGTGGGTGTT........................................................................................................................................................................................................................ 18 2 20 0.35 7 7 0 0
......................................................................................................CCAACCTCGGCCACAGGA................................................................................................................................... 18 2 5 0.20 1 1 0 0
.....................TGGTGGTGGGTGTTCTAG.................................................................................................................................................................................................................... 18 2 20 0.20 4 0 4 0
................................................................................................................CCCCCGGTATGTTAGTTTTAG...................................................................................................................... 21 3 6 0.17 1 1 0 0
...................CGTGGTGGTGGTTGTTTT...................................................................................................................................................................................................................... 18 1 20 0.10 2 2 0 0
...................CGTGGTGGTGGGTGTTCC...................................................................................................................................................................................................................... 18 2 12 0.08 1 1 0 0
...................CGTGGTGGTGGGTGTTTTTGT................................................................................................................................................................................................................... 21 2 15 0.07 1 1 0 0
...................CGAGGTGGTAGTTGTTCTAGT................................................................................................................................................................................................................... 21 3 20 0.05 1 1 0 0
.................CGCGTGGTGGTGGGTGTT........................................................................................................................................................................................................................ 18 2 20 0.05 1 1 0 0
..............GTACGTGTGGTGGTGGGTGTT........................................................................................................................................................................................................................ 21 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004511:6671739-6671989 - dwi_622 AA----------CAAAAACAGCAGCATGAGCACCACCAC------CAA---------------------------CAAGAACATGGA-G---GCCAAACACAGTTTGCAGATGAGCAGCAGCAGCAGCAGCAGCA---ATTGAGACC----------------------------------------------------------------------------------------------------CAAATGGTTGGAGCCGGG-------------------------------------GGCCTTACAATGAAAATGTTTAGAGTTTTAGC----------------------------------ACCGCAGGTGGCCACGGCAAAAATTTTTACCGGTCGA---TGCTGCTGC--------------TATTGCAGGA---TAA--TGACA---------------------GCGAACA--AGTG--C---AAAGCGT--GCAGCAACAGGAGCAGGAGCA--------
droVir3 scaffold_12970:4854231-4854483 + AA----------CAAGATCAGCAGCAGCAGCACCAAGAGCAGCAGCAG---------------------------CAGCAACAACAA-GAGCAGCAGCAGCAGC---AACAAGAGCAGCAGCAGCAGCAACAAGAGCAGCAGCAGCAGCAACAAGAGCAGCAGCAGCAGCAACAACAAGAGCAGCAGCAGCAGCAACA------AGAG---CGGCAGCAGCAACAATGACAGCA---GCAGCAAAAG------------------CAACAGCAATAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCGGCAAG----A--GCAG--C---AGCAGCA--GCAGCAATAGCAGCAAGAGCA--------
droMoj3 scaffold_6473:5650232-5650461 + AA----------CAATAATAACAGCAGCAGCAACAGCGG------CAA---------------------------TAACAACAGCAACTACAAGCAG----------CACAAGAGCAGCAGCAGCAACATCAGCACCAATGGCAATCAGAATGG---CGATCACGACTACGAGGATATATA-------------------------------------------------------------------------------------------------TTTGGTGCGCGAGGAGTCACGCA-A-----------------------------------------------GCAACATCAGC-------ACCAGCATCAGCTGCAGCAGC---------------------------------------------AGCA-----GCA-----ACA---------------------GCA-ACA--GCAG--C---AACAACA--GCAGCAACAGCAGCAACAACA--------
droGri2 scaffold_15203:5087295-5087539 + CAGGTGGTGCAACAGCAGCAGCAGCAGCAGCAACAA---------CAA---------------------------CAACAACAGCAA-CAACAACAACAACGAC---AACAACAGCAGCAGCAGCAGCAGCAGCAGCAACTTCAGTCACAGCAGGAGCAGCAGCAACAACAGCAACATGTACAACAGTGGCAACAACA------GCGG---CAACAACAGCAACCACAACAGCAGCAGCAGCGACAA------------------------------C-----------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------ACGACGACAGCA------ACAG--C---AACAGCA--ACAACAGCAGCAGCAGCAGCA--------
dp5 XR_group8:6794463-6794547 + AA----------AAACTTTTGATTAAGCTGCAGTTATGG------CAG---------------------------GTT------------------------GT---CGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGGAGCA----------------------------CAGGCAGCC---------------------------------------------------------------------TCAGA--GCGGCACCAGGAGCAGGGGCA--------
droPer2 scaffold_17:667546-667632 - CA----------GCGCTGCTGCCGCCACAGGAATAATGG------CGG---------------------------AGGCAG-A-------------GTCACAGC---CGCAGGAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG--------------------------CAGGA--GCAGCAGCAGGAGCAGCCGCA--------
droAna3 scaffold_13340:15568979-15569023 + AT----------AACAAAAGAGAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--G---CAAGGGC--GAAGCAGCAGGAGCAGGAGCA--------
droBip1 scf7180000396022:4008-4098 - AA----------CAACAACAACAACAGCAGTAGCAACAA------TAA---------------------------CAACAACAACAA-T---AACAACAACAAT---TGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACG--------------------------CAGTA--GCAGTCGCAGCAGCAGCAGTT--------
droKik1 scf7180000302401:199265-199496 + AA----------CAAAAACAGAAGCAACAGTGGCAGCAA------CTACTGGAGGTACTGCAGTCACTAAAGCAGCAACAACAGCT----------------------------ACAACAGCAACAGCAACAAGAACAGGTGCTGTTGCAGCAAAAGCAGCAACAGGAGCAAAAGC---------------AGCAACAGGAGCAAAAG---CTGCTACAGGAGCAAAAGCAGCAACAGGAGCAAAAG------------------------------C-----------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------GCAACAGGAGCA------AAAG--G---AGCAAAA--GCAGCAGCAGGAGCAAAAGCA--------
droFic1 scf7180000453495:6855-7081 - AA----------CAACAACAACAACAGCAGCAACAACAG------CAA---------------------------CAACAGCAACAA-C---AGCAACAACAGC---AACAAGAGAAACAACTGCAATAGCAACAACAACTTCT-------------------------------------------------------------------------------------------------------GCAG---------------------------------------------------------CTGATGATGCCGATTCGAGCTCCTCCACCGACCGGTTTCATT------------------------------------------ATCAGCATTTTTTCGAAGATGCTGCC--G-----------CCAGCAGCACGACA-----ACA---------------------GCA-ACACCAGAGCCC---AGCAGCA--GCAGCAACAACAGCAGCAGCA--------
droEle1 scf7180000490281:215177-215266 - CTGCGG-----------CTGGATAT----------------------------------------------------------------------------------GG------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAGCGCTTGCCTTGGTGCGTGAAAAAGCCAGCCT-----------------------------------------------------------GGAAGCA--------------------------------------------------------------------------------------------------GAAG--------------------------CAGAA--GCAGAAGCAGAAGCAGAAGCA--------
droRho1 scf7180000766314:83198-83381 - AA----------CAGCAACAGCAACAACAGCAACAACAG------CAA---------------------------CAACAGCAGCAA-C---AGCAACAACAGC---AACAGCAGCAGCAACAGCAGCAACAGCAACAGCAATT-------------------------------------------------------------------------------------------------------GCAG---------------------------------------------------------CAGTTGGCAGCCAAGCGAGCGACAATGACGACCGGCGACAGT-------------------------------------------------CTGTGCTGAAAGTCTGCGC--C-----------CCGTTAATTTGGCA-----ACT---------------------GCA-------------------------AAA-----------------A--------
droBia1 scf7180000302136:814917-815021 + AG----------CAGCAGCAGCAGCAGCAGCAACTCCAA------CAG---------------------------CAGCAGCAATAT-G---GTCAGCAACAGA---CGCAGATGGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------CAGCA--GCAGCAGCAGCAACAGCAGCAAATGGGAC
droTak1 scf7180000411534:508-532 + GC----------TTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGCAGGAGCAGGAGCA--------
droEug1 scf7180000409711:2720773-2721007 - AC----------CAAAGACAGCAGCAGCAGCAGCAGCAG------GAA---------------------------CAGCAACACCAA-AGCCAACAGCAACAAC---GACACTTGCAGCAACAACATGAGCAGCAGCAACAACA------------------------------------------------------GCAGCAAATGTTGAGATTACAC---------------------------------------------TAAAAGTA-----------------------------------------------------------------------------------------------ACTGCCAACGGGAGCAGCAACG----------------------------CCGGCTGAGGCAGAGCTGCAGCA---GAATGCAACGCATTTGGAGAGT---------GCA------GCAC--TAAAATCAATTATGTAGCCAGCGCTGCAGCAGCA--------
dm3 chrX:12625189-12625412 - AA----------CAACAGCAGCAGCAGCAGCAGCAGCAA------CAG---------------------------CAACAACAACAA-CACTAGCAACAATAAC---AACAATAGCAGCAACAGCGGCAACAACAAC------ACAC----------------------------------------------------------------------------------------------------CAAACGGTGCGCAACAGC-------------------------------------A-----------------------------------------------GCAACAACAAC-------ACCATCAGCAGCAGCAGCAACATCATCAGCAGCAACG------TGTTGTT--G-----------CCAGCAGCA---ACCAGCAACA---------------------GCA------ACAA--C---AACAACT--ACAGCAACAGCAGCAGCAGCA--------
droYak3 chr2h:852052-852103 + AT----------TTTAGGTTTTTGAAGATAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAG--------------------------TAGAA--GTAGAAGTAGAAGTAGAAGTA--------
droEre2 scaffold_2261:95-129 + GAG---------TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAG--------------------------TAAGA--GTAGGAGTAGGAGTAGGAGTA--------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AA----------CAAAAACAGCAGCATGAGCACCACCAC------CAA---------------------------CAAGAACATGGA-G---GCCAAACACAGTTTGCAGATGAGCAGCAGCAGCAGCAGCAGCA---ATTGAGACC----------------------------------------------------------------------------------------------------CAAATGGTTGGAGCCGGG-------------------------------------GGCCTTACAATGAAAATGTTTAGAGTTTTAGC----------------------------------ACCGCAGGTGGCCACGGCAAAAATTTTTACCGGTCGA---TGCTGCTGC--------------TATTGCAGGA---TAA--TGACA---------------------GCGAACA--AGTG--C---AAAGCGT--GCAGCAACAGGAGCAGGAGCA--------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................AACAGCAGCATGAGCACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
................AACAGCAGCATGAGCACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50101000
.............................................................................................................GATGAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................2090.11100001
droVir3
AA----------CAAGATCAGCAGCAGCAGCACCAAGAGCAGCAGCAG---------------------------CAGCAACAACAA-GAGCAGCAGCAGCAGC---AACAAGAGCAGCAGCAGCAGCAACAAGAGCAGCAGCAGCAGCAACAAGAGCAGCAGCAGCAGCAACAACAAGAGCAGCAGCAGCAGCAACA------AGAG---CGGCAGCAGCAACAATGACAGCA---GCAGCAAAAG------------------CAACAGCAATAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCGGCAAG----A--GCAG--C---AGCAGCA--GCAGCAATAGCAGCAAGAGCA--------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................GCAGCACCAAGAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000200000000000000000000000000000
........................................................................................................................................................................GCAACAACAAGAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................2321.002000000000000000000000000000002000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--GCAGCAATAGCAGCAAGA...........2111.001000000000000000000000000000000100000000000000000000000000000000
.............................................................................GCAACAACAA-GAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2321.002000000000000000000000000000002000000000000000000000000000000000
.......................GCAGCAGCACCAAGAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000010000000000000000000000000000000000
........................CAGCAGCACCAAGAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000000100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AGCAACAACAAGAGCAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................2520.501000000000000000000000000000001000000000000000000000000000000000
............................................................................AGCAACAACAA-GAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000000100000000000000000000000000000000
......................AGCAGCAGCACCAAGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AGCAACAACAAGAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................................................AGCAACAACAAGAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000001000000000000000000000000000000000
............................................................................AGCAACAACAA-GAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................AGCAACAATGACAGCA---GCAGCA.................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000001000000000000000000000000000000000
............................................................................AGCAACAACAA-GAGCAGCAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501000000000000000000000000000001000000000000000000000000000000000
...............................ACCAAGAGCAGCAGCAG---------------------------CA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GCAGCAACAATGACAGCA---GC.....................................................................................................................................................................................................................................................................................................2030.331000000000000000000100000000000000000000000000000000000000000000
...................................................................................................GCAGC---AACAAGAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................2740.251000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................GCAGCAACAAGAGCAGCAGCAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................2740.251000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................GCAGCAACAAGAGCAGCAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................2740.251000000000000000000000000000000000000000000000000000000000000010
...............................................G---------------------------CAGCAACAACAA-GAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................GCAGCAACAACAAGAGCAG............................................................................................................................................................................................................................................................................................................................................................1940.251000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................AGCA---GCAGCAAAAG------------------CAACAGCA...................................................................................................................................................................................................................................................................2250.201000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--C---AGCAGCA--GCAGCAATAGCAG................2560.171001000000000000000000000000000000000000000000000000000000000000
................................................................................ACAACAA-GAGCAGCAGCAGCAGC---A........................................................................................................................................................................................................................................................................................................................................................................................................................................2460.171000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................ACAGCA---GCAGCAAAAG------------------CAACA......................................................................................................................................................................................................................................................................2160.171001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AGCAACAAGAGCAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................2260.171000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................ACAACAAGAGCAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................2460.171000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................AGCAACAAGAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................2260.171000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................AGC---AACAAGAGCAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2260.171000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................ACAACAAGAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................20130.152000000000000000000000000000020000000000000000000000000000000000
................................................................................ACAACAA-GAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................20130.152000000000000000000000000000020000000000000000000000000000000000
.........................................................................................................................................................AGAGCAGCAGCAGCAGCAACA......................................................................................................................................................................................................................................................................................................................................................................21200.153000000000000000000002000000000000000001000000000000000000000000
....................................................................................................................................AGAGCAGCAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................21200.153000000000000000000002000000000000000001000000000000000000000000
...................................AGAGCAGCAGCAG---------------------------CAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000000000000000000002000000000000000001000000000000000000000000
......................................................................................A-GAGCAGCAGCAGCAGC---AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000000000000000000002000000000000000001000000000000000000000000
.................................................................................................................................................................................AGAGCAGCAGCAGCAGCAACA------........................................................................................................................................................................................................................................................................................................................................21200.153000000000000000000002000000000000000001000000000000000000000000
...............................................................................................................AGAGCAGCAGCAGCAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000000000000000000002000000000000000001000000000000000000000000
......................................................................................................GC---AACAAGAGCAGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................2370.141000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................GCAACAAGAGCAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................2370.141000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................GCAACAAGAGCAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................2370.141000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................GCAACAAGAGCAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................2170.141000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAG----A--GCAG--C---AGCAGC................................1870.141000000000000000000000000000001000000000000000000000000000000000
......................................................................................................GC---AACAAGAGCAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2170.141000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................GCAACAAGAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................2170.141000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--GCAG--C---AGCAGCA--GCAGCAATAGCA.................2570.141001000000000000000000000000000000000000000000000000000000000000
.............................................CAG---------------------------CAGCAACAACAA-GAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CAGCAGCAACAACAAGAGCA.............................................................................................................................................................................................................................................................................................................................................................2090.111000000000100000000000000000000000000000000000000000000000000000
........................................................................................GAGCAGCAGCAGCAGC---AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102001000000000000000000000100000000000000000000000000000000000000
..............................................................................................................AAGAGCAGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000002000000000000000000000000000000000000000000000000000000000
................................................................................................................GAGCAGCAGCAGCAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................20200.102001000000000000000000000100000000000000000000000000000000000000
.....................................................................................AA-GAGCAGCAGCAGCAGC---.........................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000002000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AAGAGCAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................18200.102000002000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................GAGCAGCAGCAGCAGCAACA------........................................................................................................................................................................................................................................................................................................................................20200.102001000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................GAGCAGCAGCAGCAGCAACA......................................................................................................................................................................................................................................................................................................................................................................20200.102001000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................ACAAGAGCAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000000200000000000000000000000000
...................................................................................ACAA-GAGCAGCAGCAGCAGC---.........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000000200000000000000000000000000
..............................................................................................................................................................................ACAAGAGCAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000000200000000000000000000000000
.................................................................................................................................ACAAGAGCAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................................................GAGCAGCAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................20200.102001000000000000000000000100000000000000000000000000000000000000
............................................................................................................ACAAGAGCAGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG--C---AGCAGCA--GCAGCAATAGC..................22140.071001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CAACAAGAGCAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................22160.061000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................CAACAAGAGCAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................22160.061000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................C---AACAAGAGCAGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................22160.061000000000000010000000000000000000000000000000000000000000000000
.................................................................................CAACAA-GAGCAGCAGCAGCAGC---.........................................................................................................................................................................................................................................................................................................................................................................................................................................22160.061000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................CAACAAGAGCAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................22160.061000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................ACAACAAGAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................AAGAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
....................................GAGCAGCAGCAG---------------------------CAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................CAACAAGAGCAGCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................CAACAACAAGAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................AAGAGCAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CAGCA---GCAGCAAAAG------------------CAACA......................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.................................CAAGAGCAGCAGCAG---------------------------CAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
......................................................................................A-GAGCAGCAGCAGCAGC---AA.......................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CAAGAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
.....................................................................................AA-GAGCAGCAGCAGCAGC---A........................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................C---AACAAGAGCAGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................AGAGCAGCAGCAGCAGCAA.............................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................CAAGAGCAGCAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
....................................................................................CAA-GAGCAGCAGCAGCAGC---A........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
..............................................................................CAACAACAA-GAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................CAAGAGCAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
.................................................................................CAACAA-GAGCAGCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................CAACAAGAGCAGCAGCAG......................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
................................................................................ACAACAA-GAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................CAAGAGCAGCAGCAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAG----A--GCAG--C---AGCAGCA--GCA..........................20200.051000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................AGAGCAGCAGCAGCAGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...................................AGAGCAGCAGCAG---------------------------CAGCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCAGCAGCAGCAGC---AACAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----A--GCAG--C---AGCAGCA--GCAGC........................20200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GCAGCAGCAGCAGCAACA------AG......................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AAGAGCAGCAGCAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................CAACAAGAGCAGCAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................AGAGCAGCAGCAGCAGCAA................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GCAGCAGCAGCAGCAACAAG..............................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GCAGCAGCAACAACAAGAGCT.............................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000001000000000000000000000000000000000000000000
............................................GCAG---------------------------CAGCAACAACAA-GAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................AGAGCAGCAGCAGCAGCAA........................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AGCA---GCAGCAAAAG------------------CAAC.......................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000000100000000000000000000000
droMoj3
AA----------CAATAATAACAGCAGCAGCAACAGCGG------CAA---------------------------TAACAACAGCAACTACAAGCAG----------CACAAGAGCAGCAGCAGCAACATCAGCACCAATGGCAATCAGAATGG---CGATCACGACTACGAGGATATATA-------------------------------------------------------------------------------------------------TTTGGTGCGCGAGGAGTCACGCA-A-----------------------------------------------GCAACATCAGC-------ACCAGCATCAGCTGCAGCAGC---------------------------------------------AGCA-----GCA-----ACA---------------------GCA-ACA--GCAG--C---AACAACA--GCAGCAACAGCAGCAACAACA--------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--GCAG--C---AACAACA--GCAGC........................19200.204000040
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----ACA---------------------GCA-ACA--GCAG--C---AACAACA--GC...........................25200.153200001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-ACA--GCAG--C---AACAACA--GC...........................19200.102200000
.................................................................................................................................................................................................................................................................................................................................................................................................CAGC---------------------------------------------AGCA-----GCA-----ACA---------------------GCA-ACA--................................................20200.102000020
.................................................................................................................................................................................................................................................................................................................................................................................................CAGC---------------------------------------------AGCA-----GCA-----ACA---------------------GCA-ACA--GC..............................................22200.102000020
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AACAACA--GCAGCAACAGCA.................20200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAAC.........19200.051000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----ACA---------------------GCA-ACA--GCAG--C---AACAACA--GC...........................24200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA--GCAGCAACAGCA.................18200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------GCA-ACA--GCAG--C---AACAACA--GCAGC........................24200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---------------------GCA-ACA--GCAG--C---AACAAC................................20200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--GCAG--C---AACAACA--GCAGCAACAG...................25200.051000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--GCAG--C---AACAACA--GCAGCAAC.....................23200.051000010
...........................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCAGC---------------------------------------------AGCA-----GCA-----AC...............................................................................19200.051000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--GCAGCAACAGCAGCAACAAC.........21200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-ACA--GCAG--C---AACAACA--GC...........................20200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACAAC.........18200.051000010
droGri2
CAGGTGGTGCAACAGCAGCAGCAGCAGCAGCAACAA---------CAA---------------------------CAACAACAGCAA-CAACAACAACAACGAC---AACAACAGCAGCAGCAGCAGCAGCAGCAGCAACTTCAGTCACAGCAGGAGCAGCAGCAACAACAGCAACATGTACAACAGTGGCAACAACA------GCGG---CAACAACAGCAACCACAACAGCAGCAGCAGCGACAA------------------------------C-----------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------ACGACGACAGCA------ACAG--C---AACAGCA--ACAACAGCAGCAGCAGCAGCA--------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................GCAGCAGCAGCAGCAACTTCAGTC.................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
...................................................................................................................................................ACAGCAGGAGCAGCAGCAACA............................................................................................................................................................................................................................................................................................................................................................................2170.29211
..........................................................................................................................................................GAGCAGCAGCAACAACAGCA......................................................................................................................................................................................................................................................................................................................................................................2090.22220
......................................................................................................AC---AACAACAGCAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................21200.20422
..................................................................................................................................................................................................AACA------GCGG---CAACAACAGCA......................................................................................................................................................................................................................................................................................................................1960.17110
...................................A---------CAA---------------------------CAACAACAGCAA-CAACAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05110
...........ACAGCAGCAGCAGCAGCAGCAACAA---------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05110
...............CAGCAGCAGCAGCAGCAACAA---------CAA---------------------------CA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05110
..............GCAGCAGCAGCAGCAGCAACAA---------CAA---------------------------CA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05110
.........................................................................................................................................................GGAGCAGCAGCAACAACA.........................................................................................................................................................................................................................................................................................................................................................................18200.05110
...................................................................................................................................................ACAGCAGGAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................18200.05110
......................................................................................................AC---AACAACAGCAGCAGCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
........................................................................................................................................................................................................................ACAGCAACCACAACAGCA..........................................................................................................................................................................................................................................................................................................18200.05110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCA--ACAACAGCAGCA.................19200.05101
dp5
AA----------AAACTTTTGATTAAGCTGCAGTTATGG------CAG---------------------------GTT------------------------GT---CGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGGAGCA----------------------------CAGGCAGCC---------------------------------------------------------------------TCAGA--GCGGCACCAGGAGCAGGGGCA--------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CA----------GCGCTGCTGCCGCCACAGGAATAATGG------CGG---------------------------AGGCAG-A-------------GTCACAGC---CGCAGGAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG--------------------------CAGGA--GCAGCAGCAGGAGCAGCCGCA--------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................GAGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG--------------------------CAGGA--GCAGCAGC.....................22130.081000001
droAna3
AT----------AACAAAAGAGAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--G---CAAGGGC--GAAGCAGCAGGAGCAGGAGCA--------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AA----------CAACAACAACAACAGCAGTAGCAACAA------TAA---------------------------CAACAACAACAA-T---AACAACAACAAT---TGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACG--------------------------CAGTA--GCAGTCGCAGCAGCAGCAGTT--------SizeHit CountTotal NormTotal
No Reads
droKik1
AA----------CAAAAACAGAAGCAACAGTGGCAGCAA------CTACTGGAGGTACTGCAGTCACTAAAGCAGCAACAACAGCT----------------------------ACAACAGCAACAGCAACAAGAACAGGTGCTGTTGCAGCAAAAGCAGCAACAGGAGCAAAAGC---------------AGCAACAGGAGCAAAAG---CTGCTACAGGAGCAAAAGCAGCAACAGGAGCAAAAG------------------------------C-----------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------GCAACAGGAGCA------AAAG--G---AGCAAAA--GCAGCAGCAGGAGCAAAAGCA--------SizeHit CountTotal NormTotal
No Reads
droFic1
AA----------CAACAACAACAACAGCAGCAACAACAG------CAA---------------------------CAACAGCAACAA-C---AGCAACAACAGC---AACAAGAGAAACAACTGCAATAGCAACAACAACTTCT-------------------------------------------------------------------------------------------------------GCAG---------------------------------------------------------CTGATGATGCCGATTCGAGCTCCTCCACCGACCGGTTTCATT------------------------------------------ATCAGCATTTTTTCGAAGATGCTGCC--G-----------CCAGCAGCACGACA-----ACA---------------------GCA-ACACCAGAGCCC---AGCAGCA--GCAGCAACAACAGCAGCAGCA--------SizeHit CountTotal NormTotal
No Reads
droEle1
CTGCGG-----------CTGGATAT----------------------------------------------------------------------------------GG------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAGCGCTTGCCTTGGTGCGTGAAAAAGCCAGCCT-----------------------------------------------------------GGAAGCA--------------------------------------------------------------------------------------------------GAAG--------------------------CAGAA--GCAGAAGCAGAAGCAGAAGCA--------SizeHit CountTotal NormTotal
No Reads
droRho1
AA----------CAGCAACAGCAACAACAGCAACAACAG------CAA---------------------------CAACAGCAGCAA-C---AGCAACAACAGC---AACAGCAGCAGCAACAGCAGCAACAGCAACAGCAATT-------------------------------------------------------------------------------------------------------GCAG---------------------------------------------------------CAGTTGGCAGCCAAGCGAGCGACAATGACGACCGGCGACAGT-------------------------------------------------CTGTGCTGAAAGTCTGCGC--C-----------CCGTTAATTTGGCA-----ACT---------------------GCA-------------------------AAA-----------------A--------SizeHit CountTotal NormTotal
No Reads
droBia1
AG----------CAGCAGCAGCAGCAGCAGCAACTCCAA------CAG---------------------------CAGCAGCAATAT-G---GTCAGCAACAGA---CGCAGATGGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------CAGCA--GCAGCAGCAGCAACAGCAGCAAATGGGACSizeHit CountTotal NormTotal
No Reads
droTak1
GC----------TTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGCAGGAGCAGGAGCA--------SizeHit CountTotal NormTotal
No Reads
droEug1
AC----------CAAAGACAGCAGCAGCAGCAGCAGCAG------GAA---------------------------CAGCAACACCAA-AGCCAACAGCAACAAC---GACACTTGCAGCAACAACATGAGCAGCAGCAACAACA------------------------------------------------------GCAGCAAATGTTGAGATTACAC---------------------------------------------TAAAAGTA-----------------------------------------------------------------------------------------------ACTGCCAACGGGAGCAGCAACG----------------------------CCGGCTGAGGCAGAGCTGCAGCA---GAATGCAACGCATTTGGAGAGT---------GCA------GCAC--TAAAATCAATTATGTAGCCAGCGCTGCAGCAGCA--------SizeHit CountTotal NormTotal
No Reads
dm3
AA----------CAACAGCAGCAGCAGCAGCAGCAGCAA------CAG---------------------------CAACAACAACAA-CACTAGCAACAATAAC---AACAATAGCAGCAACAGCGGCAACAACAAC------ACAC----------------------------------------------------------------------------------------------------CAAACGGTGCGCAACAGC-------------------------------------A-----------------------------------------------GCAACAACAAC-------ACCATCAGCAGCAGCAGCAACATCATCAGCAGCAACG------TGTTGTT--G-----------CCAGCAGCA---ACCAGCAACA---------------------GCA------ACAA--C---AACAACT--ACAGCAACAGCAGCAGCAGCA--------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................CAC----------------------------------------------------------------------------------------------------CAAACGGTGCGCAACAGC-------------------------------------A-----------------------------------------------GCAA..................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................ACAACAAC-------ACCATCAGCAGCAGCAGC..................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................CAGCAACATCATCAGCAGCAACG------TG.......................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AGCAACATCATCAGCAGCAACG------TGT......................................................................................................................2513.0030000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
....................................CAA------CAG---------------------------CAACAACAACAA-CACTAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CAGCAACATCATCAGCAGCAACG------TGT......................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAGCAGCAA------CAG---------------------------CAACAACAACAA-CAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................CAACAAC------ACAC----------------------------------------------------------------------------------------------------CAAACGGTGCGCA................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGCAACAATAAC---AACAATAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................AACAACAAC-------ACCATCAGCAGCAGCAGC..................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCAACAACAAC-------ACCATCAGCAGCA.......................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CAAC-------ACCATCAGCAGCAGCAGCAAC...............................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCAACAACAAC-------ACCATCAGC...........................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................AATAAC---AACAATAGCAGCAACAGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCAACG------TGTTGTT--G-----------C...................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
........................................................................................................................................................................................................................................................................................................................................................................C-------ACCATCAGCAGCAGCAGCAACATCAA..........................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................A-CACTAGCAACAATAAC---AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AACGGTGCGCAACAGC-------------------------------------A-----------------------------------------------GCAAC.................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CAAACGGTGCGCAACAGC-------------------------------------A-----------------------------------------------GC....................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CAGCAACATCATCAGCAGCAACG------T........................................................................................................................2412.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................T--G-----------CCAGCAGCA---ACCAGCAACA---------------------GCA------AA..............................................2612.0020000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................CAATAAC---AACAATAGCAGCAACAGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AACG------TGTTGTT--G-----------CCAGCAGCA---ACCAGCAA................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.......................................................................................................................................AC------ACAC----------------------------------------------------------------------------------------------------CAAACGGTGCGCAACAGC-------------------------------------A-----------------------------------------------......................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CAATAGCAGCAACAGCGGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCAACAACAAC-------ACCATCAGCAGCAGC.....................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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AT----------TTTAGGTTTTTGAAGATAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAG--------------------------TAGAA--GTAGAAGTAGAAGTAGAAGTA--------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--GTAGAAGTAGAAGTAGAAGT.........21200.05100000010000
droEre2
GAG---------TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAG--------------------------TAAGA--GTAGGAGTAGGAGTAGGAGTA--------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 11:35 PM