ID:

dwi_524

 Coordinate:

scf2_1100000004511:2931963-2932113 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.9

Flybase annnotation

exon [dwil_GLEANR_17539:2]; CDS [Dwil\GK17223-cds]; intron [Dwil\GK17223-in]; Antisense to exon [dwil_GLEANR_17302:3]; Antisense to CDS [Dwil\GK16962-cds]

No Repeatable elements found

mature
  1. scf2_1100000004511:2931124-2931148 +
  2. dwi_524  scf2_1100000004511:2932015-2932039 +
  3. dwi_526  scf2_1100000004511:2933032-2933056 +
star
  1. dwi_524  scf2_1100000004511:2931981-2932006 +
  2. dwi_526  scf2_1100000004511:2932998-2933023 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAGGATCATTCGATCCAGGGTAACATCTAGGCTTGAGTGTAGTTCTAGGCGTCTGTGGGCAACGAGGATCAGTTGACCCCGGATAACAATTGGGCCTTGAAGTAGTTACTGGTGTCCTGGTAGTTGGTGGGAGGTATGTAGCAGGTACGCATTCAGGATCATTTGAACCTGGATAACATCTTGGTTTTTGTGTGGTTTTAGGCTCCTGTGGGCAACGAGGGTCTGTGGATCCTGGGTAGCAACTCGGTTTT
********************************************************************((((..(((.((((.((((.(((.........))).)))))))).))))))).......**************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body		 V119
head
......................................................................................................TAGTTACTGGTGTCCTGGTAGTTGG............................................................................................................................ 25 0 3 18.00 54 45 9 0 0 0
.............................................................................................................................................................................................................................TCTGTGGATCCTGGGTAGCAACTCGG.... 26 0 4 15.50 62 56 6 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGTCCTGGTAG................................................................................................................................ 26 0 3 13.33 40 26 11 0 2 1
.................................................................................................TGAAGTAGTTACTGGTGTCCTGG................................................................................................................................... 23 0 3 12.67 38 33 5 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGTCCTGGTA................................................................................................................................. 25 0 3 11.33 34 30 4 0 0 0
....................................................................TCAGTTGACCCCGGATAACAATTGGG............................................................................................................................................................. 26 0 2 8.00 16 16 0 0 0 0
............................................................................................................................TGGTGGGAGGTATGTAGCAGGTACG...................................................................................................... 25 0 2 6.50 13 6 6 0 1 0
.......................................TAGTTCTAGGCGTCTGTGGGCAACG........................................................................................................................................................................................... 25 0 2 6.00 12 8 3 0 1 0
.......................................TAGTTCTAGGCGTCTGTGGGCAACGA.......................................................................................................................................................................................... 26 0 2 6.00 12 12 0 0 0 0
................................................................................................................................................................................................TGGTTTTAGGCTCCTGTGGGCAACGA................................. 26 0 5 5.40 27 25 2 0 0 0
.............................................................................................................................................................................................................................TCTGTGGATCCTGGGTAGCAACTCG..... 25 0 4 5.00 20 16 1 3 0 0
...............................................................................................................................................................................................................................TGTGGATCCTGGGTAGCAACTCGGTT.. 26 0 4 4.75 19 10 9 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGTCCTGGTAGT............................................................................................................................... 27 0 3 4.67 14 13 1 0 0 0
................................................................................................................................................................................................TGGTTTTAGGCTCCTGTGGGCAACGAG................................ 27 0 5 4.60 23 21 2 0 0 0
......................................................................................................................................TATGTAGCAGGTACGCATTCAGGATC........................................................................................... 26 0 2 4.50 9 1 8 0 0 0
.................................TGAGTGTAGTTCTAGGCGTCTGTGG................................................................................................................................................................................................. 25 0 2 4.00 8 8 0 0 0 0
......................................................................................................................................TATGTAGCAGGTACGCATTCAGGAT............................................................................................ 25 0 2 4.00 8 3 5 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGTCCTGGT.................................................................................................................................. 24 0 3 4.00 12 10 1 0 1 0
...............................................................................................................................................................................................................................TGTGGATCCTGGGTAGCAACTCGGTTT. 27 0 4 3.75 15 10 5 0 0 0
.............................................................................................................................................................................................................................TCTGTGGATCCTGGGTAGCAACTCGGT... 27 0 4 3.75 15 14 1 0 0 0
................................................................................................................................................................................................TGGTTTTAGGCTCCTGTGGGCAACG.................................. 25 0 5 3.60 18 18 0 0 0 0
....................TAACATCTAGGCTTGAGTGTAGTTC.............................................................................................................................................................................................................. 25 0 2 3.50 7 6 1 0 0 0
...............................................................................................................................................................................................................................TGTGGATCCTGGGTAGCAACTCGGT... 25 0 4 3.50 14 7 7 0 0 0
...........................................................................................................................................................................................................TCCTGTGGGCAACGAGGGTCTGTGG....................... 25 0 2 3.50 7 7 0 0 0 0
................................................................................................TTGAAGTAGTTACTGGTGTCCTGG................................................................................................................................... 24 0 3 3.33 10 10 0 0 0 0
.......................................TAGTTCTAGGCGTCTGTGGGCAAC............................................................................................................................................................................................ 24 0 2 3.00 6 6 0 0 0 0
..........................................................................................................TACTGGTGTCCTGGTAGTTGGTGG......................................................................................................................... 24 0 3 3.00 9 2 5 0 2 0
...................................................................................TAACAATTGGGCCTTGAAGTAGTTAC.............................................................................................................................................. 26 0 2 3.00 6 5 1 0 0 0
..........................................................................................................................................................................................TTTGTGTGGTTTTAGGCTCCTGTGG........................................ 25 0 2 3.00 6 2 4 0 0 0
....................................................................TCAGTTGACCCCGGATAACAATTGGGC............................................................................................................................................................ 27 0 2 3.00 6 3 3 0 0 0
............................................................................................................................................................................................TGTGTGGTTTTAGGCTCCTGTGGG....................................... 24 0 2 3.00 6 3 3 0 0 0
..............................................................................................................................................................................................................................CTGTGGATCCTGGGTAGCAACTCGG.... 25 0 4 2.50 10 10 0 0 0 0
..................................................................................................................................................................................TCTTGGTTTTTGTGTGGTTTTAGGC................................................ 25 0 2 2.50 5 5 0 0 0 0
.....................................TGTAGTTCTAGGCGTCTGTGGG................................................................................................................................................................................................ 22 0 2 2.50 5 3 2 0 0 0
...........................................................................................................................................................................................TTGTGTGGTTTTAGGCTCCTGTGGG....................................... 25 0 2 2.50 5 3 2 0 0 0
........................................................................................................................................TGTAGCAGGTACGCATTCAGGATCATT........................................................................................ 27 0 1 2.00 2 1 0 0 0 1
...............................................................................................................................TGGGAGGTATGTAGCAGGTACGCAT................................................................................................... 25 0 2 2.00 4 3 1 0 0 0
...........................................TCTAGGCGTCTGTGGGCAACGAGGA....................................................................................................................................................................................... 25 0 2 2.00 4 3 0 1 0 0
...................................................................................TAACAATTGGGCCTTGAAGTAGTT................................................................................................................................................ 24 0 2 2.00 4 0 3 0 0 1
.................................................................................................................................................TACGCATTCAGGATCATTTGAACC.................................................................................. 24 0 1 2.00 2 2 0 0 0 0
.............................................TAGGCGTCTGTGGGCAACGAGGATCA.................................................................................................................................................................................... 26 0 2 2.00 4 4 0 0 0 0
........TTCGATCCAGGGTAACATCTAGGCT.......................................................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0
................................................................................................................................................................................................................TGGGCAACGAGGGTCTGTGGATCC................... 24 0 2 2.00 4 3 1 0 0 0
........................................................................................................................................TGTAGCAGGTACGCATTCAGGATCAT......................................................................................... 26 0 1 2.00 2 1 1 0 0 0
................................................................................................................................................................................................................TGGGCAACGAGGGTCTGTGGATCCTG................. 26 0 2 2.00 4 4 0 0 0 0
....................................................................TCAGTTGACCCCGGATAACAATTGGGCC........................................................................................................................................................... 28 0 2 2.00 4 4 0 0 0 0
......................................................................................................TAGTTACTGGTGTCCTGGTAGTTG............................................................................................................................. 24 0 3 2.00 6 3 3 0 0 0
...............................................................................................................................................................................................................................TGTGGATCCTGGGTAGCAACTCGG.... 24 0 4 1.75 7 7 0 0 0 0
..................................................................................................GAAGTAGTTACTGGTGTCCTGG................................................................................................................................... 22 0 3 1.67 5 5 0 0 0 0
..................................................................................................GAAGTAGTTACTGGTGTCCTGGTAG................................................................................................................................ 25 0 3 1.67 5 4 1 0 0 0
......................................................................................................TAGTTACTGGTGTCCTGGTAGT............................................................................................................................... 22 0 3 1.67 5 2 3 0 0 0
.............................................................................................................................................................................................................................TCTGTGGATCCTGGGTAGCAACTC...... 24 0 4 1.50 6 2 3 1 0 0
.............................................................................................................................................................................TAACATCTTGGTTTTTGTGTGGTT...................................................... 24 0 2 1.50 3 2 1 0 0 0
............................................................................................................................................................................................TGTGTGGTTTTAGGCTCCTGTGGGC...................................... 25 0 2 1.50 3 2 1 0 0 0
............................................................................................................................TGGTGGGAGGTATGTAGCAGGTACGC..................................................................................................... 26 0 2 1.50 3 2 1 0 0 0
.................................TGAGTGTAGTTCTAGGCGTCTGTG.................................................................................................................................................................................................. 24 0 2 1.50 3 3 0 0 0 0
...........................................................................................................................TTGGTGGGAGGTATGTAGCAGGTACG...................................................................................................... 26 0 2 1.50 3 3 0 0 0 0
.........................................................................................................................................................................................TTTTGTGTGGTTTTAGGCTCCTGTG......................................... 25 0 2 1.50 3 2 1 0 0 0
.............................................................................................................................................................................................................................TCTGTGGATCCTGGGTAGCAACTCGGTT.. 28 0 4 1.50 6 6 0 0 0 0
..............................................................................................................................................................................................TGTGGTTTTAGGCTCCTGTGGGCAAC................................... 26 0 2 1.50 3 1 2 0 0 0
......................................................................................................................................................................................................TAGGCTCCTGTGGGCAACGAGGGT............................. 24 0 2 1.50 3 3 0 0 0 0
.............................................TAGGCGTCTGTGGGCAACGAGGA....................................................................................................................................................................................... 23 0 2 1.50 3 0 3 0 0 0
.................................TGAGTGTAGTTCTAGGCGTCTGTGGG................................................................................................................................................................................................ 26 0 2 1.50 3 3 0 0 0 0
...................................................................................TAACAATTGGGCCTTGAAGTAGTTA............................................................................................................................................... 25 0 2 1.50 3 3 0 0 0 0
...........................................................................................................................................................................................TTGTGTGGTTTTAGGCTCCTGTGG........................................ 24 0 2 1.50 3 3 0 0 0 0
....................................................................TCAGTTGACCCCGGATAACAATTGGGCCT.......................................................................................................................................................... 29 0 2 1.50 3 3 0 0 0 0
.......................................TAGTTCTAGGCGTCTGTGGGCAACGAG......................................................................................................................................................................................... 27 0 2 1.50 3 3 0 0 0 0
....................TAACATCTAGGCTTGAGTGTAGTTCT............................................................................................................................................................................................................. 26 0 2 1.50 3 2 1 0 0 0
.............................................TAGGCGTCTGTGGGCAACGAGGATCAGT.................................................................................................................................................................................. 28 0 2 1.50 3 0 0 2 1 0
....................................................................................................................................................................................................TTTAGGCTCCTGTGGGCAACGAGGG.............................. 25 0 2 1.50 3 1 1 1 0 0
.................................................................................................................................................................................................GGTTTTAGGCTCCTGTGGGCAACGA................................. 25 0 5 1.40 7 6 1 0 0 0
......................................................................................................TAGTTACTGGTGTCCTGGTAGTTGGTA.......................................................................................................................... 27 1 3 1.33 4 1 3 0 0 0
................................................................................................TTGAAGTAGTTACTGGTGTCCTGGTAG................................................................................................................................ 27 0 3 1.33 4 2 2 0 0 0
.......................................................................................................AGTTACTGGTGTCCTGGTAGTTGG............................................................................................................................ 24 0 3 1.33 4 4 0 0 0 0
......................................................................................................TAGTTACTGGTGTCCTGGTAGTT.............................................................................................................................. 23 0 3 1.33 4 4 0 0 0 0
............................................................................................................................TGGTGGGAGGTATGTAGCAGGTAC....................................................................................................... 24 0 3 1.33 4 2 2 0 0 0
................................................................................................................................................................................................TGGTTTTAGGCTCCTGTGGGCAAC................................... 24 0 5 1.20 6 2 3 0 0 1
....................TAACATCTAGGCTTGAGTGTAG................................................................................................................................................................................................................. 22 0 2 1.00 2 1 1 0 0 0
.....................................................TGTGGGCAACGAGGATCAGTTGAC.............................................................................................................................................................................. 24 0 2 1.00 2 0 2 0 0 0
.....................................................TGTGGGCAACGAGGATCAGTTGACC............................................................................................................................................................................. 25 0 2 1.00 2 0 2 0 0 0
......................................................................................................................................TATGTAGCAGGTACGCATTCAGGATCGT......................................................................................... 28 1 2 1.00 2 0 2 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGTCCT..................................................................................................................................... 21 0 3 1.00 3 1 2 0 0 0
.....................................................................CAGTTGACCCCGGATAACAATTGGGCC........................................................................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................TAGGCTCCTGTGGGCAACGAGGGTCTG.......................... 27 0 2 1.00 2 2 0 0 0 0
..............................................................................................................................................................TCATTTGAACCTGGATAACATCTTGG................................................................... 26 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................TAGGCTCCTGTGGGCAACGAGGGTC............................ 25 0 2 1.00 2 2 0 0 0 0
.......................................................TGGGCAACGAGGATCAGTTGACCCCGGA........................................................................................................................................................................ 28 0 2 1.00 2 1 1 0 0 0
...........................................................................................................................TTGGTGGGAGGTATGTAGCAGGTACGC..................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................TAGGCTCCTGTGGGCAACGAGG............................... 22 0 5 1.00 5 4 1 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGTCCTG.................................................................................................................................... 22 0 3 1.00 3 3 0 0 0 0
......................................................................................................................................TATGTAGCAGTTACGCATTCAGGATCAT......................................................................................... 28 1 1 1.00 1 1 0 0 0 0
............................................................................................................................TGGTGGGAGGTATGTAGCAGGTACGCA.................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
....................................................................TCAGTTGACCCCGGATAACAATTGG.............................................................................................................................................................. 25 0 2 1.00 2 2 0 0 0 0
.........................................................................TGACCCCGGATAACAATTGGGCCTTG........................................................................................................................................................ 26 0 2 1.00 2 2 0 0 0 0
................AGGGTAACATCTAGGCTTGAGTG.................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.....................................................................CAGTTGACCCCGGATAACAATTGGG............................................................................................................................................................. 25 0 2 1.00 2 2 0 0 0 0
........................................................................................................................................TGTAGCAGGTACGCATTCAGGATC........................................................................................... 24 0 2 1.00 2 0 2 0 0 0
.........................................................................................................................................................................................TTTTGTGTGGTTTTAGGCTCCTGTGG........................................ 26 0 2 1.00 2 2 0 0 0 0
...................................................................................................................................................................................................TTTTAGGCTCCTGTGGGCAACGAGG............................... 25 0 5 1.00 5 4 1 0 0 0
........................................................................................................................................TGTAGCAGGTACGCATTCAGGATCA.......................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.....TCATTCGATCCAGGGTAACA.................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.............................................TAGGCGTCTGTGGGCAACGAGG........................................................................................................................................................................................ 22 0 2 1.00 2 2 0 0 0 0
..................................................................................................................TCCTGGTAGTTGGTGGGAGGTATG................................................................................................................. 24 0 3 1.00 3 2 0 0 1 0
.................................................................................................................................................................................ATCTTGGTTTTTGTGTGGTTTTAGGC................................................ 26 0 2 1.00 2 1 1 0 0 0
.............................................................................................................................................................................TAACATCTTGGTTTTTGTGTGGTTT..................................................... 25 0 2 1.00 2 2 0 0 0 0
............................................................................................................................................................................................TGTGTGGTTTTAGGCTCCTGTGG........................................ 23 0 2 1.00 2 2 0 0 0 0
......CATTCGATCCAGGGTAACATCTAGGCT.......................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.....................................TGTAGTTCTAGGCGTCTGTGGGCAACGA.......................................................................................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0
...................................................................................................................................................................................................TTTTAGGCTCCTGTGGGCAACGAGGG.............................. 26 0 2 1.00 2 2 0 0 0 0
.......ATTCGATCCAGGGTAACATCTAGGC........................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.....TCATTCGATCCAGGGTAACATCTAG............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
...................................................TCTGTGGGCAACGAGGATCAGTTGACC............................................................................................................................................................................. 27 0 2 1.00 2 2 0 0 0 0
.....................................................................................................................................................................................TGGTTTTTGTGTGGTTTTAGGCTC.............................................. 24 0 2 1.00 2 2 0 0 0 0
.............TCCAGGGTAACATCTAGGCTTGAGTGTA.................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
.........TCGATCCAGGGTAACATCTAGGCTTG........................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................TGTGGTTTTAGGCTCCTGTGGG....................................... 22 0 2 1.00 2 0 2 0 0 0
......................................................................................................................................TATGTAGCAGGTACGCATTCAGGATCAT......................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................ATGTAGCAGGTACGCATTCAGGATC........................................................................................... 25 0 2 1.00 2 2 0 0 0 0
..........................................TTCTAGGCGTCTGTGGGCAACGAG......................................................................................................................................................................................... 24 0 2 1.00 2 1 1 0 0 0
......CATTCGATCCAGGGTAACATCTAGG............................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
....................TAACATCTAGGCTTGAGTGTAGT................................................................................................................................................................................................................ 23 0 2 1.00 2 1 1 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGTCCTGGTAT................................................................................................................................ 26 1 3 1.00 3 1 2 0 0 0
.....TCATTCGATCCAGGGTAACATCTAGG............................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................TATGTAGCAGGTACGCATTCAGGA............................................................................................. 24 0 2 1.00 2 0 2 0 0 0
......................................................................................................TAGTTACTGGTGTCCTGGTAGTTGGT........................................................................................................................... 26 0 3 1.00 3 2 1 0 0 0
.....................................................................................................................................................................................................TTAGGCTCCTGTGGGCAACGAGGG.............................. 24 0 2 1.00 2 1 1 0 0 0
.....................................................................................................................................................................................TGGTTTTTGTGTGGTTTTAGGCTCC............................................. 25 0 2 1.00 2 2 0 0 0 0
.....TCATTCGATCCAGGGTAACATCTAGGC........................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................TTCAGGATCATTTGAACCTGGATAACA......................................................................... 27 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................TAGGCTCCTGTGGGCAACGAGGG.............................. 23 0 2 1.00 2 1 1 0 0 0
.....................................................................................................................................................................................................TTAGGCTCCTGTGGGCAACGAGG............................... 23 0 5 0.80 4 3 1 0 0 0
.....................................................................................................GTAGTTACTGGTGTCCTGGTAGTT.............................................................................................................................. 24 0 3 0.67 2 1 1 0 0 0
........................................................................................................................TAGTTGGTGGGAGGTATGTAGCAGG.......................................................................................................... 25 0 3 0.67 2 2 0 0 0 0
......................................................................................................TAGTTACTGGTGTCCTGGTAG................................................................................................................................ 21 0 3 0.67 2 0 2 0 0 0
..................................................................................................GAAGTAGTTACTGGTGTCCTGGT.................................................................................................................................. 23 0 3 0.67 2 2 0 0 0 0
.................................................................................................................................................................................................GGTTTTAGGCTCCTGTGGGCAACGAG................................ 26 0 5 0.60 3 3 0 0 0 0
................................................................................................................................................................................................TGGTTTTAGGCTCCTGTGGGCAACGAGG............................... 28 0 5 0.60 3 3 0 0 0 0
................................................................................................................................................................................................TGGTTTTAGGCTCCTGTGGG....................................... 20 0 5 0.60 3 2 1 0 0 0
....................................................................................................................................................................................................TTTAGGCTCCTGTGGGCAACGAGG............................... 24 0 5 0.60 3 3 0 0 0 0
..............................................................................................CCTTGAAGTAGTTACTGGTGTCCTGG................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................TTAGGCTCCTGTGGGCAACGAGGGTC............................ 26 0 2 0.50 1 0 1 0 0 0
...........................................................................................................................................................................................TTGTGTGGTTTTAGGCTC.............................................. 18 0 2 0.50 1 0 1 0 0 0
............................................................................................................................................................................................TGTGTGGTTTTAGGCTCCTGTGGGCAAT................................... 28 1 2 0.50 1 0 0 0 0 1
.......................................................................................................................................................................................GTTTTTGTGTGGTTTTAGGCTCCTG........................................... 25 0 2 0.50 1 1 0 0 0 0
....................TAACATCTAGGGTTGAGTGTAGTTCG............................................................................................................................................................................................................. 26 2 2 0.50 1 1 0 0 0 0
.........................................................................TGACCCCGGATAACAATTGGGCCT.......................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................ATCTTGGTTTTTGTGTGGTTTTAGG................................................. 25 0 2 0.50 1 0 1 0 0 0
...............................................................................................................................TGGGAGGTATGTAGCAGGTACGCATT.................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................TCATTTGAACCTGGATAACATC....................................................................... 22 0 2 0.50 1 0 1 0 0 0
............................................................................................................................TGGTGGGAGGTATGTAGCAGGTACGA..................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
....................TAACATCTAGGCTTGAGTGTAGTT............................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.................................................................................GATAACAATTGGGCCTTGAAGTAGTT................................................................................................................................................ 26 0 2 0.50 1 0 1 0 0 0
...................................................................................TAACAATTGGGCCTTGAAGTAGT................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
.......................................TAGTTCTAGGCGTCTTTGGGC............................................................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
........................................AGTTCTAGGCGTCTGTGGGCAACG........................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
................................................................................................................................GGGAGGTATGTAGCAGGTACGCATT.................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
..........................................TTCTAGGCGTCTGTGGGCAACGAGGA....................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................................TTTTAGGCTCCTGTGGGCAACGAGGGT............................. 27 0 2 0.50 1 0 1 0 0 0
.........................................................GGCAACGAGGATCAGTTGACCCCGGA........................................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................GGATAACATCTTGGTTTTTGTGT.......................................................... 23 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................GTGGGAGGTATGTAGCAGGTACG...................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................GTATGTAGCAGGTACGCATTCAGGAT............................................................................................ 26 0 2 0.50 1 1 0 0 0 0
......................ACATCTAGGCTTGAGTGTAGTTCTAG........................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.....................................TGTAGTTCTAGGCGTCTGTGGGCAAC............................................................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................TGTGGTTTTAGGCTCCTGTGGGCAATA.................................. 27 2 2 0.50 1 1 0 0 0 0
....................................................CTGTGGGCAACGAGGATCAGTTGACCC............................................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................TGGTTTTTGTGTGGTTTTAGG................................................. 21 0 2 0.50 1 0 1 0 0 0
.....................................................................................................................................................................................GGGTTTTTGTGTGGTTTTAGGCTCC............................................. 25 1 2 0.50 1 1 0 0 0 0
........................................AGTTCTAGGCGTCTGTGGGCAACGAG......................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
............................................................AACGATGATCAGTTGACGC............................................................................................................................................................................ 19 2 2 0.50 1 0 0 1 0 0
.......................................TAGTTCTAGGCATCTGTGGGCAACGA.......................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................AGGCTCCTGTGGGCAACGAGGGTCTG.......................... 26 0 2 0.50 1 1 0 0 0 0
.......................................TAGTTCTAGGCGTCTGTGGGCAACGAT......................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0
..........................................TTCTAGGCGTCTGTGGGCAACGAGG........................................................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0
.............................................TAGGCGTCTGTGGGCAACGAGGTAAA.................................................................................................................................................................................... 26 3 2 0.50 1 1 0 0 0 0
.......................................TAGTTCTAGGCATCTGTGGGCAACGAG......................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................CATTCAGGATCATTTGAACCTGGA.............................................................................. 24 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................CTCCTGTGGGCAACGAGGGTCTG.......................... 23 0 2 0.50 1 1 0 0 0 0
.......................................TAGTTCTAGGAGTCTGTGGGCAACGT.......................................................................................................................................................................................... 26 2 2 0.50 1 0 1 0 0 0
...........................................................................................................................TTGGTGGGAGGTATGTAGCAGGTACGCA.................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................TCCTGTGGGCAACGAGGGTCTGTGGA...................... 26 0 2 0.50 1 1 0 0 0 0
..................................GAGTGTAGTTCTAGGCGTCTGTGG................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
...................................................................ATCAGTTGACCCCGGATAACAAT................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................................GGGCAACGAGGGTCTGTGGATCCTGGG............... 27 0 2 0.50 1 1 0 0 0 0
.....................................................................CAGTTGACCCCGGATAACAATTGGGCCT.......................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
................................TTGAGTGTAGTTCTAGGCGTCTGT................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
...................................................................................TAACAATTGGGCCTTGAAA..................................................................................................................................................... 19 1 2 0.50 1 0 1 0 0 0
...................................................................................TAACAATTGGGCCTTGAAGAA................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
.........................................GTTCTAGGCGTCTGTGGGCAACGAG......................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.............................................................ACGAGGATCAGTTGACCCCGGATAACAA.................................................................................................................................................................. 28 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................................CTGTGGATCCTGGGTAGCAACTCGGT... 26 0 4 0.50 2 2 0 0 0 0
..............................................................................................................................................................................................TGTGGTTTTAGGCTCCTGTGGGCAA.................................... 25 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................TCCTGTGGGCAACGAGGGTCTGTT........................ 24 1 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................TGTGGTTTTAGGCTCCTGTGA........................................ 21 1 2 0.50 1 1 0 0 0 0
............................................CTAGGCGTCTGTGGGCAACGAGG........................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................................GATCATTTGAACCTGGATAA........................................................................... 20 0 2 0.50 1 1 0 0 0 0
........................................AGTTCTAGGCGTCTGTGGGCAACGA.......................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................................GGGCAACGAGGGTCTGTGGATCCTGG................ 26 0 2 0.50 1 1 0 0 0 0
...................................................TCTGTGGGCAACGAGGATCAGTTT................................................................................................................................................................................ 24 1 2 0.50 1 0 1 0 0 0
....................TAACATCTAGGCTTGAGTGTAGTTCTG............................................................................................................................................................................................................ 27 1 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................GGTTTTTGTGTGGTTTTAGGCTCCT............................................ 25 0 2 0.50 1 0 1 0 0 0
......................................GTAGTTCTAGGCGTCTGTGGGCAA............................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................CATCTTGGTTTTTGTGTGGTTTTAG.................................................. 25 0 2 0.50 1 1 0 0 0 0
...............................................................................CGGATAACAATTGGGCCTTGAAGT.................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
......................................................................................CAATTGGGCCTTGAAGTAGTTACTGG........................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
...............................TGTGAGTGTAGTTCTAGGCGTCTGTGG................................................................................................................................................................................................. 27 2 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................TCCTGTGGGCAACGAGGGTCTG.......................... 22 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................AGGCTCCTGTGGGCAACGAGGGT............................. 23 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................ACATCTTGGTTTTTGTGTGGTTTTAG.................................................. 26 0 2 0.50 1 1 0 0 0 0
.............................................TAGGCGTCTGTGGGCAACGAG......................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
................................................................................................................................GGGAGGTATGTAGCAGGTACGCAT................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................TGGTTTTTGTGTGGTTTTAGGCTCCTG........................................... 27 0 2 0.50 1 1 0 0 0 0
...........................................TCTAGGCGTCTGTGGGCAACGAGGAT...................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................................................................GTGGATCCTGGGTAGCAACTCGG.... 23 0 4 0.50 2 2 0 0 0 0
...............................................................................................................................TGGGAGGTATGTAGCAGGTACGCA.................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................TGTGGGCAACGAGGGTCTGTGG....................... 22 0 2 0.50 1 1 0 0 0 0
...........................................TCTAGGCGTCTGTGGGCAACGAGG........................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
.............................................TAGGCGTCTGTGGGCAACGAGGAT...................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.......................CATCTAGGCTTGAGTGTAGTTCTAGGC......................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
...........................TAGGCTTGAGTGTAGTTCTAGGCGTCT..................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................TGGATAACATCTTGGTTTTTGTGTGG........................................................ 26 0 2 0.50 1 1 0 0 0 0
..................................................................GATCAGTTGACCCCGGATAACAAT................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................TATGTAACAGGTACGCATTCAGGAT............................................................................................ 25 1 2 0.50 1 0 1 0 0 0
...........................................TCTAGGCGTCTGTGGGCAACGAGGTAA..................................................................................................................................................................................... 27 3 2 0.50 1 1 0 0 0 0
...................................................TCTGTGGGCAACGAGGATCAGTTGATA............................................................................................................................................................................. 27 2 2 0.50 1 0 1 0 0 0
..........................................................................................................................................................................................TTTGTGTGGTTTTAGGCTCCTG........................................... 22 0 2 0.50 1 1 0 0 0 0
....................TAACATCTAGGCTTGAGTGTAGTTCTAA........................................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
..................................................................................................................................GAGGTATGTAGCAGGTACGCATTCAGGA............................................................................................. 28 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................TTAGGCTCCTGTGGGCAACGAGGGTCT........................... 27 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................TTTGTGTGGTTTTAGGCTC.............................................. 19 0 2 0.50 1 0 1 0 0 0
...........................................................................................................................................AGCAGGTACGCATTCAGGAT............................................................................................ 20 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................TGTGGTTTTAGACTCCTGTGGGCAACG.................................. 27 1 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................TAGGCTCCTGTGGGCAACGAGGGTCT........................... 26 0 2 0.50 1 1 0 0 0 0
...................................................................................TAACAATTGGGCCTTGAAG..................................................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0
....................TAACATCTAGGCTTGAGT..................................................................................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................TGTGGTTTTAGGCTCCTGTGGGC...................................... 23 0 2 0.50 1 0 1 0 0 0
.........................TCTAGGCTTGAGTGTAGTTCTAGGC......................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................................................................GTGGATCCTGGGTAGCAACTCGGTTT. 26 0 4 0.50 2 2 0 0 0 0
..................................................................................................................................................................................TCTTGGTTTTTGTGTGGTTTTAGG................................................. 24 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................TGGGAGGTATGTAGCAGGTACGC..................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.......................................TAGTTCTAGGCGTCTGTGGGCA.............................................................................................................................................................................................. 22 0 2 0.50 1 0 1 0 0 0
....................................GTGTAGTTCTAGGCGTCTGTGGGCAA............................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................TCATTTGAACCTGGATAACATCT...................................................................... 23 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................................................................................GGATCCTGGGTAGCAACTCGGTTT. 24 0 4 0.50 2 2 0 0 0 0
................................................................................................................................................................................................................TGGGCAACGAGGGTCTGTGGATC.................... 23 0 2 0.50 1 0 1 0 0 0
...........................................................................................................................................................................................................TCCTGTGGGCAACGAGGGTCTGTG........................ 24 0 2 0.50 1 1 0 0 0 0
................................TTGAGTGTAGTTCTAGGCGTCTGTGGG................................................................................................................................................................................................ 27 0 2 0.50 1 0 1 0 0 0
....................................................................................................................................................................................................TTTAGGCTCCTGTGGGCAACGAGGGTC............................ 27 0 2 0.50 1 1 0 0 0 0
...........................................TCTGGGCGTCTGTGGGCAACGAGGA....................................................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
................................TTGAGTGTAGTTCTAGGCGTCTGTG.................................................................................................................................................................................................. 25 0 2 0.50 1 0 1 0 0 0
..............................................................................................................................................................................................TGTGGTTTTAGGCTCCTGTGGGCA..................................... 24 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................GGTTTTTGTGTGGTTTTAGGCTCCTGT.......................................... 27 0 2 0.50 1 1 0 0 0 0
.....................................TGTAGTTCTAGGCGTCTGTGGGC............................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.....................................TGTAGTTCTAGGCGTCTGTGGGCAATA........................................................................................................................................................................................... 27 2 2 0.50 1 1 0 0 0 0
....................TAACATCTAGGCTTGAGTGTAGTTCTT............................................................................................................................................................................................................ 27 1 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................TGTGGGCAACGAGGGTCTGTGGA...................... 23 0 2 0.50 1 0 1 0 0 0
.....................................................................................................................................................................................................TTAGGCTCCTGTGGGCAACGAGGGT............................. 25 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................TTAGGCTCCTGTGGGCAACGAGGGA............................. 25 1 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................................................TGGGCAACGAGGGTCTGTGG....................... 20 0 2 0.50 1 1 0 0 0 0
...............................................................................CGGATAACAATTGGGCCTTGAAG..................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.........................................................................................TTGGGCCTTGAAGTAGTTACTGGTG......................................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0
...................................................................................TAACAATTGGGCCTTGAAGTAGTTT............................................................................................................................................... 25 1 2 0.50 1 0 1 0 0 0
.........................................................................................................................................................................TGGATAACATCTTGGTTTTTGTGTGGTT...................................................... 28 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................TTTGTGTGGTTTTAGGCTCCTGTGGT....................................... 26 1 2 0.50 1 0 1 0 0 0
.....................AACATCTAGGCTTGAGTGTAGTTCTG............................................................................................................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................TGTGGGCAACGAGGGTCTGTGGAT..................... 24 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................TGGTTTTTGTGTGGTTTTAGGCTCCA............................................ 26 1 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................TGTGTGGTTTTAGGCTCCTGTGGGCA..................................... 26 0 2 0.50 1 1 0 0 0 0
...........................TAGGCTTGAGTGTAGTTCTAGGCGTC...................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................TGGATAACATCTTGGTTTTTGTGTG......................................................... 25 0 2 0.50 1 1 0 0 0 0
.................................................CGTCTGTGGGCAACGAGGATCAGTTG................................................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................GGTATGTAGCAGGTACGCATTCAGG.............................................................................................. 25 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................TTGGTTTTTGTGTGGTTTTAGGCTCCTG........................................... 28 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................TTTGTGTGGTTTTAGGCTCCTGTGGGCA..................................... 28 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................TTTAGGCTCCTGTGGGCAACGAGGGT............................. 26 0 2 0.50 1 0 1 0 0 0
..............................................................................................................................GTGGGAGGTATGTAGCAGGTACGCA.................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................CATTTGAACCTGGATAACATCTTGG................................................................... 25 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................TATGTAGCAGGTACGCATTCAGG.............................................................................................. 23 0 2 0.50 1 0 1 0 0 0
.............................................................................................................................GGTGGGAGGTATGTAGCAGGTACG...................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................TAACATCTTGGTTTTTGTGTG......................................................... 21 0 2 0.50 1 1 0 0 0 0
.....................................................................................ACAATTGGGCCTTGAAGTAGTTACTG............................................................................................................................................ 26 0 2 0.50 1 0 1 0 0 0
.............................................................................................................................GGTGGGAGGTATGTAGCAGGTACGC..................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................GGTTTTAGGCTCCTGTGGGCAACG.................................. 24 0 5 0.40 2 2 0 0 0 0
................................................................................................................................................................................................TGGTTTTAGGCTCCTGTGGGCAACGAGA............................... 28 1 5 0.40 2 2 0 0 0 0
.................................................................................................................................................................................................GGTTTTAGGCTCCTGTGGGCAACGAGG............................... 27 0 5 0.40 2 2 0 0 0 0
.....................................................................................................................TGGTAGTTGGTGGGAGGTATG................................................................................................................. 21 0 3 0.33 1 0 1 0 0 0
.............................................................................................................TGGTGTCCTGGTAGTTGGTGG......................................................................................................................... 21 0 3 0.33 1 0 1 0 0 0
...............................................................................................CTTGAAGTAGTTACTGGTGTCCTGGTAG................................................................................................................................ 28 0 3 0.33 1 1 0 0 0 0
...........................................................................................................................TTGGTGGGAGGTATGTAGCAGGTA........................................................................................................ 24 0 3 0.33 1 0 1 0 0 0
................................................................................................TTGAAGTAGTTACTGGTGTCCTGGT.................................................................................................................................. 25 0 3 0.33 1 1 0 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGTCCTGGTAA................................................................................................................................ 26 1 3 0.33 1 0 1 0 0 0
......................................................................................................TAGTTACTGGTGTCCTGGTAGTTGTAA.......................................................................................................................... 27 3 3 0.33 1 0 1 0 0 0
...........................................................................................................................TTGGTGGGAGGTATGTAGCAG........................................................................................................... 21 0 3 0.33 1 1 0 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGTCCTGGTAATA.............................................................................................................................. 28 2 3 0.33 1 1 0 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGTCCTGGTTA................................................................................................................................ 26 2 3 0.33 1 1 0 0 0 0
.............................................................................................................TGGTGTCCTGGTAGTTGGTGGG........................................................................................................................ 22 0 3 0.33 1 0 1 0 0 0
......................................................................................................TAGTTACTGGTGTCCTGGTAGTTGGCA.......................................................................................................................... 27 2 3 0.33 1 1 0 0 0 0
...................................................................................................AAGTAGTTACTGGTGTCCTGG................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0
.................................................................................................TGAAGTAGTTACTGGTGT........................................................................................................................................ 18 0 3 0.33 1 0 1 0 0 0
......................................................................................................TAGTTACTGGTGTCCTGGTAGTTGGTGG......................................................................................................................... 28 0 3 0.33 1 1 0 0 0 0
..................................................................................................................TCCTGGTAGTTGGTGGGAGGT.................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0

Anti-sense strand reads

###########################################################################################################################################################################################################################################################
GTCCTAGTAAGCTAGGTCCCATTGTAGATCCGAACTCACATCAAGATCCGCAGACACCCGTTGCTCCTAGTCAACTGGGGCCTATTGTTAACCCGGAACTTCATCAATGACCACAGGACCATCAACCACCCTCCATACATCGTCCATGCGTAAGTCCTAGTAAACTTGGACCTATTGTAGAACCAAAAACACACCAAAATCCGAGGACACCCGTTGCTCCCAGACACCTAGGACCCATCGTTGAGCCAAAA
****************************************************************************************************************************((((..(((.((((.((((.(((.........))).)))))))).))))))).......******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
............................................................................................................................................CGTCCATGCGTAAGTCCTAGTAAACTT.................................................................................... 27 0 1 3.00 3 2 1 0 0
...............................................................................................................................................................................TGTAGAACCAAAAACACACCAAAATCC................................................. 27 0 2 2.00 4 4 0 0 0
.........................AGATCCGAACTCACATCAAGATCC.......................................................................................................................................................................................................... 24 0 2 2.00 4 4 0 0 0
.....AGTAAGCTAGGTCCCATTGTAGATC............................................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0
........................................................................................TAACCCGGAACTTCATCAATGACC........................................................................................................................................... 24 0 2 1.50 3 3 0 0 0
.........................................CAAGATCCGCAGACACCCGTTGCT.......................................................................................................................................................................................... 24 0 2 1.00 2 2 0 0 0
........................................................................................................................................ACATCGTCCATGCGTAAGTCCTAGTA......................................................................................... 26 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................TGCTCCCAGACACCTAGGACCCATC............ 25 0 2 1.00 2 1 1 0 0
......GTAAGCTAGGTCCCATTGTAGATC............................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
........................................................................................................................................ACATCGTCCATGCGTAAGTCCTAGT.......................................................................................... 25 0 1 1.00 1 1 0 0 0
...............................................................................................................................................CCATGCGTAAGTCCTAGTAAACTTG................................................................................... 25 0 1 1.00 1 1 0 0 0
......................................................................................GTTAACCCGGAACTTCATCAATGACC........................................................................................................................................... 26 0 2 1.00 2 2 0 0 0
...................................................................................................................................................................................................................CGTTGCTCCCAGACACCTAG.................... 20 0 2 1.00 2 2 0 0 0
..........................GATCCGAACTCACATCAAGATCC.......................................................................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0
.........................................................................................AACCCGGAACTTCATCAATGACC........................................................................................................................................... 23 0 2 1.00 2 2 0 0 0
............................................................................................................................................CGTCCATGCGTAAGTCCTATTAAACT..................................................................................... 26 1 1 1.00 1 0 1 0 0
...CTAGTAAGCTAGGTCCCATTGTAGAT.............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................CCCGTTGCTCCCAGACACCTAG.................... 22 0 2 1.00 2 2 0 0 0
......................TGTAGATCCGAACTCACATCAAGATC........................................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0
..........GCTAGGTCCCATTGTAGATCCGAACTC...................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
....................................................................AGTCAACTGGGGCCTATTGTTAACC.............................................................................................................................................................. 25 0 2 1.00 2 2 0 0 0
......................................................................TCAACTGGGGCCTATTGTTAACC.............................................................................................................................................................. 23 0 2 1.00 2 1 1 0 0
.................................................................................................................................................ATGCGTAAGTCCTAGTAAACTTGG.................................................................................. 24 0 1 1.00 1 1 0 0 0
.................CCCATTGTAGATCCGAACTCACATCA................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0
.....AGTAAGCTAGGTCCCATTGTAGAT.............................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
......GTAAGCTAGGTCCCATTGTAGATCCGA.......................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
.........................AGATCCGAACTCACATCAAGATCCGCA....................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0
...............................................CCGCAGACACCCGTTGCTCCTAGTCAACT............................................................................................................................................................................... 29 0 2 0.50 1 1 0 0 0
.......................................................................................................................................................................GGACCTATTGTAGAACCAAAAACACAC......................................................... 27 0 2 0.50 1 1 0 0 0
..........................................................................................................................................................................CCTATTGTAGAACCAAAAACACACC........................................................ 25 0 2 0.50 1 1 0 0 0
................................................................................................................................................................................................................ACCCGTTGCTCCCAGACACCTA..................... 22 0 2 0.50 1 1 0 0 0
..................................................................................................................................................................................................................CCGTTGCTCCCAGACACCTAGGA.................. 23 0 2 0.50 1 1 0 0 0
...............................................................................................................................................................................TGTAGAACCAAAAACACACCAAAATCCG................................................ 28 0 2 0.50 1 1 0 0 0
.......................GTAGATCCGAACTCACATCAAGAT............................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0
............................................................................................................................................................................................................GGACACCCGTTGCTCCCAGACACCTAGGA.................. 29 0 2 0.50 1 1 0 0 0
..........................................................................................................................................................TCCTAGTAAACTTGGACCTATTGTA........................................................................ 25 0 2 0.50 1 1 0 0 0
...................................................................................................................................................................................GAACCAAAAACACACCAAAATCCG................................................ 24 0 2 0.50 1 1 0 0 0
.............................................................................................................................................................................ATTGTAGAACCAAAAACACACCAAA..................................................... 25 0 2 0.50 1 1 0 0 0
...............................................CCGCAGACACCCGTTGCTCCTAGTCAA................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0
....................................................................................................................................................................................................................GTTGCTCCCGGACACCTAGGA.................. 21 1 2 0.50 1 1 0 0 0
....................................................................AGTCAACTGGGGCCTATTGTTAACCC............................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0
.....................................................................................................................................CATACATCGTCCATGCGTAAGTCCTA............................................................................................ 26 0 2 0.50 1 1 0 0 0
..................................................................................................................................................................................AGAACCAAAAACACACCAAAATCCG................................................ 25 0 2 0.50 1 1 0 0 0
...........................................................................................................................................................CCTAGTAAACTTGGACCTATTGTA........................................................................ 24 0 2 0.50 1 1 0 0 0
..........................................................................................................................................................................................AAACACACCAAAATCCGAGGACACCCG...................................... 27 0 2 0.50 1 1 0 0 0
..............................................................................................................................................................................TTGTAGAACCAAAAACACACCAAAATCCG................................................ 29 0 2 0.50 1 1 0 0 0
.........................................CAAGATCCGCAGACACCCGTTGCTC......................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
.................................................................................CTATTGTTAACCCGGAACTTCATCAA................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0
....................................................................................................................................................................................................................GTTGCTCCCAGACACCTAGGACCCATC............ 27 0 2 0.50 1 1 0 0 0
............................TCCGAACTCACATCAAGATCCGCAGAC.................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0
..............................................TCCGCAGACACCCGTTGCTCCTAGT.................................................................................................................................................................................... 25 0 2 0.50 1 0 0 1 0
...........................................................................................................................................................CCTAGTAAACTTGGACCTATTGT......................................................................... 23 0 2 0.50 1 1 0 0 0
..............................CGAACTCACATCAAGATCCGCAGAC.................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
.......................................................................................TTAACCCGGAACTTCATCAATGACC........................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
..............................................................................GGCCTATTGTTAACCCGGAACTTCATCA................................................................................................................................................. 28 0 2 0.50 1 1 0 0 0
...................................................AGACACCCGTTGCTCCTAGTCAA................................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0
....................................................................................TTGTTAACCCGGAACTTCATC.................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0
..............................................................................................................................................................AGTAAACTTGGACCTATTGTAGAAC.................................................................... 25 0 2 0.50 1 0 1 0 0
..........................................................................................................................................................................CCTATTGTAGAACCAAAAACACACCA....................................................... 26 0 2 0.50 1 1 0 0 0
.........................................................................................................................................................................................................................TCCCAGACACCTAGGACCCATC............ 22 0 2 0.50 1 1 0 0 0
.......................................................................................................................................................................................................................GCTCCCAGACACCTAGGACCCATC............ 24 0 2 0.50 1 1 0 0 0
........................................TCAAGATCCGCAGACACCCGTTGCT.......................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
......................TGTAGATCCGAACTCACATCAAGAT............................................................................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0
.................................................................................................................................................................................................................CCCGTTGCTCCCAGACACCTAGGA.................. 24 0 2 0.50 1 1 0 0 0
........................................................................................................................................................................................................................CTCCCAGACACCTAGGACCCATC............ 23 0 2 0.50 1 1 0 0 0
......................TGTAGATCCGAACTCACATCAAGATCC.......................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0
............................................................................................................................................................CTAGTAAACTTGGACCTATTGTAGAAC.................................................................... 27 0 2 0.50 1 1 0 0 0
............................................................................................CCGGAACTTCATCAATGACCACAGGAC.................................................................................................................................... 27 0 2 0.50 1 0 0 1 0
......................................................................................................................................................................................................................TGCTCCCAGACACCTAGGACCCATCGT.......... 27 0 2 0.50 1 0 1 0 0
........................................................................................................................................................................................................CCGAGGACACCCGTTGCTCCCAGACACCT...................... 29 0 2 0.50 1 1 0 0 0
.............................................................................................................................CCACCCTCCATACATCGTCCATGCGT.................................................................................................... 26 0 2 0.50 1 0 1 0 0
........................................................CCCGTTGCTCCTAGTCAACTG.............................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0
.......................................................................CAACTGGGCGCTACTGTTA................................................................................................................................................................. 19 3 15 0.47 7 6 0 1 0
..................................................................................................................AGGACCATCAACCACCCTCCATA.................................................................................................................. 23 0 3 0.33 1 1 0 0 0
.........................................................................................................................TCAACCACCCTCCATACGTCGTC........................................................................................................... 23 1 3 0.33 1 1 0 0 0
................................................................................................................ACAGGACCATCAACCACCCTC...................................................................................................................... 21 0 3 0.33 1 1 0 0 0
..................................................................................................................AGGACCATCAACCACCCTCCATACAT............................................................................................................... 26 0 3 0.33 1 1 0 0 0
..........................................................CGTTGCTCCTAGTCGTCTG.............................................................................................................................................................................. 19 2 3 0.33 1 0 0 0 1
......................................................................................................................CCATCAACCACCCTCCATACATCGT............................................................................................................ 25 0 3 0.33 1 1 0 0 0
..............................................................................................................................CACCCTCCGTACATCGTCCAT........................................................................................................ 21 1 3 0.33 1 1 0 0 0
.....................................................................................................................ACCATCAACCACCCTCCATACATCGT............................................................................................................ 26 0 3 0.33 1 1 0 0 0
........................................................CCGGTTGCTCCTAGTCGTCTGG............................................................................................................................................................................. 22 3 3 0.33 1 0 0 1 0
.............................................................................................................................CCACCCTCCATACATCGTCCA......................................................................................................... 21 0 3 0.33 1 1 0 0 0
......................................................................................................................................................................TGGACCTATTGTAGAACCAAAA............................................................... 22 0 3 0.33 1 0 1 0 0
...................................................................................................................GGACCATCAACCACCCTCCATA.................................................................................................................. 22 0 3 0.33 1 1 0 0 0
...............................................................................................................CACAGGACCATCAACCACCCTCCATACAT............................................................................................................... 29 0 3 0.33 1 1 0 0 0
................................................................................................................ACAGGACCATCAACCACCCTCCATACAT............................................................................................................... 28 0 3 0.33 1 1 0 0 0
....................................................................................................................GACCATCAACCACCCTCCATACATCGT............................................................................................................ 27 0 3 0.33 1 1 0 0 0
......................................................................................................................................................................................................TTCCGAGGACACCCGTTGCT................................. 20 1 5 0.20 1 0 1 0 0
................................................................................................................................................................................................ACCAAAATCCGAGGACACCCGTTGCT................................. 26 0 5 0.20 1 0 1 0 0
..............................................................GCTCCTAGTCGTCTGGTGC.......................................................................................................................................................................... 19 3 17 0.06 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004511:2931913-2932163 + dwi_524 CAGGATCATTCGATCCAGGGTAACATCTAGGCTTGAGTGTAGTTCTAGGCGTCTG---------TGGGCAACGAGGATCAGTTGACCCCGGATAACAATTGGGCCTTGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTTGGTGGGAGGTATGTAGCAGGTACGCATTCAGGATCATTTGAACCTGGATAACATCTTGGTTTTTGTGTGGTTTTAGGCTCCT------------GTGGGCAACGAGGGTCTGTGGATCCTGGGTAGCAACTCGGTTTT------
droVir3 scaffold_13049:13640022-13640275 - GAACATCGGTAGATCCAGGATAACAGTTGGGCGAAGCAGTCGTCTTTGGCTGTTG---------TGGACAGCGAGGATCGGTTGAGCCTGGATAACACCTTGGCTTAGTCGGTGTTACTGGTGG---------------------------------------------------------ACGAACTGTAGTTGGAGGCAAGTAAGTTGCAGGTTGACAATCGGGATCTGTTGAACCAGGATAGCAACGGGGCTTCGATGTGGTCTTGGGCTCTT------------GTGGACAACGAGGGTCACTCGATCCAGGATAGCAGTTGGGCGAA------
droMoj3 scaffold_6680:13701146-13701399 + GAGGATCACGTGCTCCAGGATAGCAATTAGGCGCAGCTGTCGTTTTCGGCTCTTG---------AGGACAACGAGGATCAGTTGAGCCCGGATAGCATCTTGGTTTTGTAGTTGTCACAGGTGG---------------------------------------------------------ACTTCTGGTAGTTGGAGGCAGATAAGTAGCTGGCTGGCAATCAGGATCTGTGGATCCTGGAAGGCAACGTGTCCTTTGTGTAGTTATGGGCTCCC------------GTGGGCAACGAGGATCTCGTGATCCAGGATAGCAGTTTGGTGCA------
droGri2 scaffold_15110:15590363-15590616 + GAGGGTCAGTAGATCCTGGGTAGCAGTTAGGCGAAGCAGTTGTCTTTGGCTGTTG---------TGGACAACGAGGATCGCTTGAGCCAGGATAGCAGCTTGGCTTAGACGTTGTTACTATTGG---------------------------------------------------------TCGAACTGTAGTTGGAGGCAAGTAGGTGGCTGGTTGGCAATCGGGATCAGTTGAGCCTGGATAACAACGAGGTTTCGATGTGGTTTTGGGCTGTT------------GTGGACAACGAGGGTCAGTAGATCCTGGGTAGCACTTAGGCGAA------
dp5 XR_group6:13071246-13071499 + CAGGATCGGATGAGCCGGGATAGCAACGTGGCTTCAGTGTCGATGCGGGTTCTTG---------AGGGCATCGAGGATCGGTTGAACCTGGGTAACACCGTGGTTTGGGTCTATCTACTGGTGT---------------------------------------------------------TTTGATCGTTGTTGGAGGCAGGTAAGTTGCGGGCTGACACTCTGGATCTGATGAGCCAGGATAACATCTCGGCTTTTTTGTCGTTGCGGGCTTCT------------GAGGACATCGAGGATCGGTAGACCCTGGGAAGCACTGTGGTTTG------
droPer2 scaffold_88:96843-97093 + CAGGATCGGATGAGCCGGGATAGCAACGTGGCTTCAGTGTCGATGCGGGTTCTTG---------AGGGCATCGAGGATCGGTTGAACCTGGGTAACACCGTGGTTTGGGTCTATCTACTGGTGT---------------------------------------------------------TTTGATCGTTATTGGAGGCAGGTAAGTTGCGGGCTGACACTCTGGATCTGATGAGCCAGGATAACATCTCGGCTTTGTTGTAGTTGCTGGCCTCT------------GAGGACATCGAGGATCGGTCGATCCTGGATAGCATTTCGGT---------
droAna3 scaffold_13337:10781965-10782215 - CTGGATCAGGTGAGCCCGGATAACATCTCGGCCTCTGGGTCGTTACTGGGACCTG---------GGGGCAACGTTTGTCGGTGGAACCTGGATAACAATTCGGCTTGGAAGTAGTCACAGGCGTTCTT------------------------------------------------------------GTCGTGGGGGGAGAATATGTGGCAGGTTGGCAGCTCGGGTCCGACGATCCAGGATAGCATCTAGGCCTCGGCGTAGTCACTGGGATCT------------GAGGACAGCGCCTATCTGTGGATCCGGGATAACAATTTGGCTTA------
droBip1 scf7180000396569:595702-595929 + TGGGATCCGGTGATCCAGGATAACACCTAGGCTTTGGAGTGGTTACTGGTATTTG---------TGGACAGCGACTATCTGTAGATCCAGGATAACAATTTGGCTTGGAAGTAGTTACGGGAGTCCTG------------------------------------------------------------GTC---------------GTAGCCGGCTGACATTCAGGATCACTCGAGCCCGGATAACATCTTGGCCTCAAGGTTGTTGCCG------------------GCTGACATTCCGGGTCTGGTGATCCTGGATAGCACCTAGGCC--------
droKik1 scf7180000302441:3139269-3139506 - AGGAATCGT--GGTCCTTGCAGATACTGGAG--ATTGAGTCG------TGACTCT---------GGGGCACCGGCTGTCAGTCGCGCCCGGGAAGCAATCGGGCCTGGCAGTGGTTATTTGAGTCCTCGAGGTTGGAGGAGCGTAAGTAATTGGTGTGGTTGGCTTCGTTGGAATTGATACTCTCCTTGTTGACGGTGGGAGATAAGTGGCCGGCTGGCATTTTATGTCGTCGGAGCCCTCGGAGCACCCGGCCCTT---------------------------------------------------------------------------------
droFic1 scf7180000454113:1911785-1912056 + CAGGATCATCGGAGCCTGGATAACATCTTGGCTTTTGTGTGGTTAATGGTGCCCGTGTTCTGGGTTGACATTCAGGATCAGTTGATCCGGGATAACAACGGGGTTTCGGTGTGGTCACCGGAAT---------------------------------------------------------TCTCCTCGTTGTTGGTGGAAGGTAAGTGGCCGGCTGGCATTCTGGATCCTCAGAACCAGGATAACATCTTGGCTTTGATGTGGTTATAGGTGCTCGA---GTCCTGGGCTGGCAGCTTGGATCGGTAGATCCCGGATAACACCTTGGTTTT------
droEle1 scf7180000491193:4742147-4742409 - CAGGATCTGGTGATCCCGGATAACATCTGGGCTTTGGAGTCGTTGGCGGTTTTTG---------TGGGCAACGACTATCTGTTGAGCCCGGATAACAGTTGGGCTTCGATGTAGTGGAAGGTCTTCG------------------------------------------------------------TGTTGTCGGAGGCAAGTAAGTAGCTGGTTGGCAATCAGGATCATTCGAGCCCGGATAACAACGTGGTTTGGGTGGCGGAATTGTTGTTCGCACCGTAGCTGGCTGGCATTCCGGGTCCGTTGAGCCGGGATAGCACCTGGGCTTT------
droRho1 scf7180000769696:18017-18261 - CAGGGTCCTTTGAGCCTGGGTAACATCTCGGTTTTGGTGACGTCACTGGTTCCTG---------TGGACAGCGTCTATCCGTCGAGCCAGGGTAACAATTTGGCTTGGAAGTAGTTACGGGAGTCCTT------------------------------------------------------------GTAGTCGGAGGAGAGTAAGTTGCTGGTTGGCACTCTGGATCGTTGGAGCCAGGATAACATCTTGGCCTTAAAGTTGTTGGTT------------------GTTCGCAAGCAGGATCAGAAGACCCGGCGTAACAACTTGGTGTT------
droBia1 scf7180000302193:5641230-5641495 + CGGGATTAGGTGAGCCTGGGTAACACCTTGGCTTTTGAGTCGTCACTGGTTCCTG---------TGGGCAACGCCTATCTGTCGATCCTGGATAACAGTTTGGCTTGGAAGTGGTCACAGGAGTCCTT------------------------------------------------------------GTAGTGGGAGGAGAGTAGGTAGCTGGCTGACATTCTGGATCACTTGAGCCAGGATAACATCTCGGCCTCAAAGTGGTTACGGTGGCTCTG---GTTGAAGGTTGGCAGTCAGGATCAGGAGATCCCGGGTAGCACCTCGGTGTGGTAACC
droTak1 scf7180000415254:250661-250905 + AAGGATCATTTGAACCCGGATAGCAACGTGGCTTGGTTGTAGTGATAGGAGTTCT------TGTCGTGCAGTCAGGATCATTGGAGCCCGGATAACATCTTGGCCTAGCTGTAGGAA---------------------------------------------------------------------TCGTTACTGGTGGGAGGTAAGTAGCCGGTTGACAATCAGGGTCCCTCGAGCCTGGGTAACATCTAGGTTTCTCTGTAGTTACAGGTTCCT------------GTGGACAGCGTCTGTCCGTAGATCCCGGATAACAGTTTGGCTTG------
droEug1 scf7180000409711:5569048-5569292 + TAGGATCTGTTGATCCCGGGAAACATCTTGGTTTTGGTGTCGTTGGTGGTTTTTG---------GGGACAACGACGATCAGTTGATCCCGGATAACAATTTGGCTTTGAAGTAGTTACAGGTGTCCGA------------------------------------------------------------GTTGTTGGTGG---TTGAGTTGGTTGCGGACAGCTGGGATCAGTTGATCCAGGATAGCACCTTGGCTTAGGTGCAATTGTTGGAG---------------GTTGGCAACTAGGATCATTGGAACCCGGATAACACCTTGGCTTG------
dm3 chr3L:20413689-20413939 - CAGGATCTGAAGAACCAGGGGAGCACTTCGGTTTTAGAGTAGTAGGTGGCTTCTG---------GGGACAGCGACTATCGGTGGAGCCTGGATAACAATTTGGCTTGGATGTTGTCACAGGTGTTCTA------------------------------------------------------------GTTGTAGGAGGTGAGTATGTGGCCTTTTGACATTCTGGGTTTGGTGAGCCAGGGTAACATCTAGGCTTTGGTGTTGTAACGGGTTCCT------------TTGGACAGCGTCGGTCTGTTGAGCCCGGATAGCAATTTGGCTTT------
droSim2 3l:19982328-19982578 - CCGGATCTGAAGAGCTAGGGGAGCACTTCGGTTTTAGCGTAGTAGGTGGTTTCTG---------GGGACAGCGACTATCGGTGGAGCCTGGATAACAATTTGGCTTGGATGTTGTCACAGGTGTTCTA------------------------------------------------------------GTTGTAGGAGGCGAGTATGTGGCCGGTTGACATTCTGGGTTTGGTGAGCCAGGGTAACATCTAGGCTTTGGTGTTGTAACGGGTTCCT------------TTGGACAGCGTCGGTCTGTTGAGCCCGGATAGCAATTTGGCTTT------
droSec2 scaffold_11:306507-306754 - GACTATCGGTGGATCCAGGATAACAATTTGGTTTCCTTGTTGTTGGTGGC---------------TGGCAATACGGATCGCTTGAACCAGGATAACACCTTGGTTTGGTAGTAGCAATCGTTGT---------------------------------------------------------TCTTGCTGTCGTTGGTGGAAGGTAAGTTGCAGGCTGACAGTCAGGATCTGTGGATCCAGGGTAACACCTAGGTTGCGGCGTAGTTCGCGGTGTCT------------GCGGGCAGCGACTATCTGTGGAGCCCGGATAACAGTTTGGCTTA------
droYak3 v2_chr3L_random_229:854-1110 - CGGGATCAGAGGATCCCGGGAAACACCTCGGTCGTTGCGTAGTTAGCGGTGTCAG------AGGTTGGCAACTAGGATCACTGGAACCCGGGTAACACCTTGGCCTCGACGTTGTAATTGTCGT---------------------------------------------------------TCGAGCCGTAGTTGGTGGGAGATAAGTAGCAGGCTGACATTCGGGGTCCGTTGAGCCAGGATAACATCTCGGCTTTAATGTCGTCACGAGGTCTT------------GTGGGCAGCGTCTGTCTGTCGACCCCGGATAACAATTTGGCTTG------
droEre2 scaffold_4784:20111647-20111918 - CAGGGTCAGTGGATCCTTGATAACATCTTGGCAGCGATGTGGTAATCGTTGGCCTTGTTCTCGGTTGACAGTCGGGATCTGTTGATCCCGGGTAACAACGTGGCCTCTTCGTAGTAATGGGAGC---------------------------------------------------------TTTCCTCGTTGTAGGCGGAATATAAGTTGCCGGCTGACATTCGGGGTCATCGGAGCCTGGATAGCATCTTGGCTTCATTGTGGTAATAGGTGTCCTT---GTTGCCGGTTGACAAATAGGATCTGTTGATCCTGGATAGCAACGCGGCTTG------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CAGGATCATTCGATCCAGGGTAACATCTAGGCTTGAGTGTAGTTCTAGGCGTCTG---------TGGGCAACGAGGATCAGTTGACCCCGGATAACAATTGGGCCTTGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTTGGTGGGAGGTATGTAGCAGGTACGCATTCAGGATCATTTGAACCTGGATAACATCTTGGTTTTTGTGTGGTTTTAGGCTCCT------------GTGGGCAACGAGGGTCTGTGGATCCTGGGTAGCAACTCGGTTTT------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................TAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTTGG..............................................................................................................................................25318.0054045090
..............................................................................................................................................................................................................................................................................................................TCTGTGGATCCTGGGTAGCAACTCGG..........26415.5062056060
..........................................................................................................TGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTAG..................................................................................................................................................26313.33400262111
..........................................................................................................TGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------G.....................................................................................................................................................23312.6738033050
..........................................................................................................TGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTA...................................................................................................................................................25311.3334030040
.............................................................................TCAGTTGACCCCGGATAACAATTGGG...........................................................................................................................................................................................................................................2628.0016016000
.................................................................................................................................................................................................TGGTGGGAGGTATGTAGCAGGTACG........................................................................................................................2526.501306160
.......................................TAGTTCTAGGCGTCTG---------TGGGCAACG.........................................................................................................................................................................................................................................................................2526.001208130
.......................................TAGTTCTAGGCGTCTG---------TGGGCAACGA........................................................................................................................................................................................................................................................................2626.0012012000
.....................................................................................................................................................................................................................................................................TGGTTTTAGGCTCCT------------GTGGGCAACGA.......................................2655.4027025020
..............................................................................................................................................................................................................................................................................................................TCTGTGGATCCTGGGTAGCAACTCG...........2545.0020316010
................................................................................................................................................................................................................................................................................................................TGTGGATCCTGGGTAGCAACTCGGTT........2644.7519010090
..........................................................................................................TGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTAGT.................................................................................................................................................2734.6714013010
.....................................................................................................................................................................................................................................................................TGGTTTTAGGCTCCT------------GTGGGCAACGAG......................................2754.6023021020
...........................................................................................................................................................................................................TATGTAGCAGGTACGCATTCAGGATC.............................................................................................................2624.50901080
.................................TGAGTGTAGTTCTAGGCGTCTG---------TGG...............................................................................................................................................................................................................................................................................2524.00808000
...........................................................................................................................................................................................................TATGTAGCAGGTACGCATTCAGGAT..............................................................................................................2524.00803050
..........................................................................................................TGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GT....................................................................................................................................................2434.0012010110
................................................................................................................................................................................................................................................................................................................TGTGGATCCTGGGTAGCAACTCGGTTT.......2743.7515010050
..............................................................................................................................................................................................................................................................................................................TCTGTGGATCCTGGGTAGCAACTCGGT.........2743.7515014010
.....................................................................................................................................................................................................................................................................TGGTTTTAGGCTCCT------------GTGGGCAACG........................................2553.6018018000
....................TAACATCTAGGCTTGAGTGTAGTTC.....................................................................................................................................................................................................................................................................................................2523.50706010
................................................................................................................................................................................................................................................................................................................TGTGGATCCTGGGTAGCAACTCGGT.........2543.501407070
................................................................................................................................................................................................................................................................................TCCT------------GTGGGCAACGAGGGTCTGTGG.............................2523.50707000
.........................................................................................................TTGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------G.....................................................................................................................................................2433.3310010000
.......................................TAGTTCTAGGCGTCTG---------TGGGCAAC..........................................................................................................................................................................................................................................................................2423.00606000
...................................................................................................................TACTGGTGTCCTG------------------------------------------------------------GTAGTTGGTGG...........................................................................................................................................2433.00902250
............................................................................................TAACAATTGGGCCTTGAAGTAGTTAC............................................................................................................................................................................................................................2623.00605010
...............................................................................................................................................................................................................................................................TTTGTGTGGTTTTAGGCTCCT------------GTGG..............................................2523.00602040
.............................................................................TCAGTTGACCCCGGATAACAATTGGGC..........................................................................................................................................................................................................................................2723.00603030
.................................................................................................................................................................................................................................................................TGTGTGGTTTTAGGCTCCT------------GTGGG.............................................2423.00603030
...............................................................................................................................................................................................................................................................................................................CTGTGGATCCTGGGTAGCAACTCGG..........2542.5010010000
.......................................................................................................................................................................................................................................................TCTTGGTTTTTGTGTGGTTTTAGGC..................................................................2522.50505000
.....................................TGTAGTTCTAGGCGTCTG---------TGGG..............................................................................................................................................................................................................................................................................2222.50503020
................................................................................................................................................................................................................................................................TTGTGTGGTTTTAGGCTCCT------------GTGGG.............................................2522.50503020
.............................................................................................................................................................................................................TGTAGCAGGTACGCATTCAGGATCATT..........................................................................................................2712.00201001
....................................................................................................................................................................................................TGGGAGGTATGTAGCAGGTACGCAT.....................................................................................................................2522.00403010
...........................................TCTAGGCGTCTG---------TGGGCAACGAGGA.....................................................................................................................................................................................................................................................................2522.00413000
............................................................................................TAACAATTGGGCCTTGAAGTAGTT..............................................................................................................................................................................................................................2422.00400031
......................................................................................................................................................................................................................TACGCATTCAGGATCATTTGAACC....................................................................................................2412.00202000
.............................................TAGGCGTCTG---------TGGGCAACGAGGATCA..................................................................................................................................................................................................................................................................2622.00404000
........TTCGATCCAGGGTAACATCTAGGCT.................................................................................................................................................................................................................................................................................................................2512.00201010
.................................................................................................................................................................................................................................................................................................TGGGCAACGAGGGTCTGTGGATCC.........................2422.00403010
.............................................................................................................................................................................................................TGTAGCAGGTACGCATTCAGGATCAT...........................................................................................................2612.00201010
.................................................................................................................................................................................................................................................................................................TGGGCAACGAGGGTCTGTGGATCCTG.......................2622.00404000
.............................................................................TCAGTTGACCCCGGATAACAATTGGGCC.........................................................................................................................................................................................................................................2822.00404000
...............................................................................................................TAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTTG...............................................................................................................................................2432.00603030
................................................................................................................................................................................................................................................................................................................TGTGGATCCTGGGTAGCAACTCGG..........2441.75707000
...........................................................................................................GAAGTAGTTACTGGTGTCCTG------------------------------------------------------------G.....................................................................................................................................................2231.67505000
...........................................................................................................GAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTAG..................................................................................................................................................2531.67504010
...............................................................................................................TAGTTACTGGTGTCCTG------------------------------------------------------------GTAGT.................................................................................................................................................2231.67502030
..............................................................................................................................................................................................................................................................................................................TCTGTGGATCCTGGGTAGCAACTC............2441.50612030
..................................................................................................................................................................................................................................................TAACATCTTGGTTTTTGTGTGGTT........................................................................2421.50302010
.................................................................................................................................................................................................................................................................TGTGTGGTTTTAGGCTCCT------------GTGGGC............................................2521.50302010
.................................................................................................................................................................................................TGGTGGGAGGTATGTAGCAGGTACGC.......................................................................................................................2621.50302010
.................................TGAGTGTAGTTCTAGGCGTCTG---------TG................................................................................................................................................................................................................................................................................2421.50303000
................................................................................................................................................................................................TTGGTGGGAGGTATGTAGCAGGTACG........................................................................................................................2621.50303000
..............................................................................................................................................................................................................................................................TTTTGTGTGGTTTTAGGCTCCT------------GTG...............................................2521.50302010
..............................................................................................................................................................................................................................................................................................................TCTGTGGATCCTGGGTAGCAACTCGGTT........2841.50606000
...................................................................................................................................................................................................................................................................TGTGGTTTTAGGCTCCT------------GTGGGCAAC.........................................2621.50301020
...........................................................................................................................................................................................................................................................................TAGGCTCCT------------GTGGGCAACGAGGGT...................................2421.50303000
.............................................TAGGCGTCTG---------TGGGCAACGAGGA.....................................................................................................................................................................................................................................................................2321.50300030
.................................TGAGTGTAGTTCTAGGCGTCTG---------TGGG..............................................................................................................................................................................................................................................................................2621.50303000
............................................................................................TAACAATTGGGCCTTGAAGTAGTTA.............................................................................................................................................................................................................................2521.50303000
................................................................................................................................................................................................................................................................TTGTGTGGTTTTAGGCTCCT------------GTGG..............................................2421.50303000
.............................................................................TCAGTTGACCCCGGATAACAATTGGGCCT........................................................................................................................................................................................................................................2921.50303000
.......................................TAGTTCTAGGCGTCTG---------TGGGCAACGAG.......................................................................................................................................................................................................................................................................2721.50303000
....................TAACATCTAGGCTTGAGTGTAGTTCT....................................................................................................................................................................................................................................................................................................2621.50302010
.............................................TAGGCGTCTG---------TGGGCAACGAGGATCAGT................................................................................................................................................................................................................................................................2821.50320100
.........................................................................................................................................................................................................................................................................TTTAGGCTCCT------------GTGGGCAACGAGGG....................................2521.50311010
......................................................................................................................................................................................................................................................................GGTTTTAGGCTCCT------------GTGGGCAACGA.......................................2551.40706010
...............................................................................................................TAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTTGGTA............................................................................................................................................2731.33401030
.........................................................................................................TTGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTAG..................................................................................................................................................2731.33402020
................................................................................................................AGTTACTGGTGTCCTG------------------------------------------------------------GTAGTTGG..............................................................................................................................................2431.33404000
...............................................................................................................TAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTT................................................................................................................................................2331.33404000
.................................................................................................................................................................................................TGGTGGGAGGTATGTAGCAGGTAC.........................................................................................................................2431.33402020
.....................................................................................................................................................................................................................................................................TGGTTTTAGGCTCCT------------GTGGGCAAC.........................................2451.20602031
....................TAACATCTAGGCTTGAGTGTAG........................................................................................................................................................................................................................................................................................................2221.00201010
.....................................................TG---------TGGGCAACGAGGATCAGTTGAC............................................................................................................................................................................................................................................................2421.00200020
.....................................................TG---------TGGGCAACGAGGATCAGTTGACC...........................................................................................................................................................................................................................................................2521.00200020
..........................................................................................................TGAAGTAGTTACTGGTGTCCT...................................................................................................................................................................................................................2131.00301020
..............................................................................CAGTTGACCCCGGATAACAATTGGGCC.........................................................................................................................................................................................................................................2721.00202000
...........................................................................................................................................................................................................................................................................TAGGCTCCT------------GTGGGCAACGAGGGTCTG................................2721.00202000
...................................................................................................................................................................................................................................TCATTTGAACCTGGATAACATCTTGG.....................................................................................2621.00202000
...........................................................................................................................................................................................................................................................................TAGGCTCCT------------GTGGGCAACGAGGGTC..................................2521.00202000
................................................................TGGGCAACGAGGATCAGTTGACCCCGGA......................................................................................................................................................................................................................................................2821.00201010
................................................................................................................................................................................................TTGGTGGGAGGTATGTAGCAGGTACGC.......................................................................................................................2721.00202000
...........................................................................................................................................................................................................................................................................TAGGCTCCT------------GTGGGCAACGAGG.....................................2251.00504010
..........................................................................................................TGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------......................................................................................................................................................2231.00303000
.................................................................................................................................................................................................TGGTGGGAGGTATGTAGCAGGTACGCA......................................................................................................................2721.00202000
.............................................................................TCAGTTGACCCCGGATAACAATTGG............................................................................................................................................................................................................................................2521.00202000
..................................................................................TGACCCCGGATAACAATTGGGCCTTG......................................................................................................................................................................................................................................2621.00202000
................AGGGTAACATCTAGGCTTGAGTG...........................................................................................................................................................................................................................................................................................................2311.00101000
..............................................................................CAGTTGACCCCGGATAACAATTGGG...........................................................................................................................................................................................................................................2521.00202000
.............................................................................................................................................................................................................TGTAGCAGGTACGCATTCAGGATC.............................................................................................................2421.00200020
..............................................................................................................................................................................................................................................................TTTTGTGTGGTTTTAGGCTCCT------------GTGG..............................................2621.00202000
........................................................................................................................................................................................................................................................................TTTTAGGCTCCT------------GTGGGCAACGAGG.....................................2551.00504010
.............................................................................................................................................................................................................TGTAGCAGGTACGCATTCAGGATCA............................................................................................................2511.00101000
.....TCATTCGATCCAGGGTAACA.........................................................................................................................................................................................................................................................................................................................2011.00101000
.............................................TAGGCGTCTG---------TGGGCAACGAGG......................................................................................................................................................................................................................................................................2221.00202000
...........................................................................................................................TCCTG------------------------------------------------------------GTAGTTGGTGGGAGGTATG...................................................................................................................................2431.00302100
......................................................................................................................................................................................................................................................ATCTTGGTTTTTGTGTGGTTTTAGGC..................................................................2621.00201010
..................................................................................................................................................................................................................................................TAACATCTTGGTTTTTGTGTGGTTT.......................................................................2521.00202000
.................................................................................................................................................................................................................................................................TGTGTGGTTTTAGGCTCCT------------GTGG..............................................2321.00202000
......CATTCGATCCAGGGTAACATCTAGGCT.................................................................................................................................................................................................................................................................................................................2711.00101000
.....................................TGTAGTTCTAGGCGTCTG---------TGGGCAACGA........................................................................................................................................................................................................................................................................2821.00202000
........................................................................................................................................................................................................................................................................TTTTAGGCTCCT------------GTGGGCAACGAGGG....................................2621.00202000
.......ATTCGATCCAGGGTAACATCTAGGC..................................................................................................................................................................................................................................................................................................................2511.00101000
.....TCATTCGATCCAGGGTAACATCTAG....................................................................................................................................................................................................................................................................................................................2511.00101000
...................................................TCTG---------TGGGCAACGAGGATCAGTTGACC...........................................................................................................................................................................................................................................................2721.00202000
..........................................................................................................................................................................................................................................................TGGTTTTTGTGTGGTTTTAGGCTC................................................................2421.00202000
.............TCCAGGGTAACATCTAGGCTTGAGTGTA.........................................................................................................................................................................................................................................................................................................2811.00101000
.........TCGATCCAGGGTAACATCTAGGCTTG...............................................................................................................................................................................................................................................................................................................2611.00101000
...................................................................................................................................................................................................................................................................TGTGGTTTTAGGCTCCT------------GTGGG.............................................2221.00200020
...........................................................................................................................................................................................................TATGTAGCAGGTACGCATTCAGGATCAT...........................................................................................................2811.00101000
............................................................................................................................................................................................................ATGTAGCAGGTACGCATTCAGGATC.............................................................................................................2521.00202000
..........................................TTCTAGGCGTCTG---------TGGGCAACGAG.......................................................................................................................................................................................................................................................................2421.00201010
......CATTCGATCCAGGGTAACATCTAGG...................................................................................................................................................................................................................................................................................................................2511.00101000
....................TAACATCTAGGCTTGAGTGTAGT.......................................................................................................................................................................................................................................................................................................2321.00201010
..........................................................................................................TGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTAT..................................................................................................................................................2631.00301020
.....TCATTCGATCCAGGGTAACATCTAGG...................................................................................................................................................................................................................................................................................................................2611.00101000
...........................................................................................................................................................................................................TATGTAGCAGGTACGCATTCAGGA...............................................................................................................2421.00200020
...............................................................................................................TAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTTGGT.............................................................................................................................................2631.00302010
..........................................................................................................................................................................................................................................................................TTAGGCTCCT------------GTGGGCAACGAGGG....................................2421.00201010
..........................................................................................................................................................................................................................................................TGGTTTTTGTGTGGTTTTAGGCTCC...............................................................2521.00202000
.....TCATTCGATCCAGGGTAACATCTAGGC..................................................................................................................................................................................................................................................................................................................2711.00101000
............................................................................................................................................................................................................................TTCAGGATCATTTGAACCTGGATAACA...........................................................................................2721.00202000
...........................................................................................................................................................................................................................................................................TAGGCTCCT------------GTGGGCAACGAGGG....................................2321.00201010
..........................................................................................................................................................................................................................................................................TTAGGCTCCT------------GTGGGCAACGAGG.....................................2350.80403010
..............................................................................................................GTAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTT................................................................................................................................................2430.67201010
.............................................................................................................................................................................................TAGTTGGTGGGAGGTATGTAGCAGG............................................................................................................................2530.67202000
...............................................................................................................TAGTTACTGGTGTCCTG------------------------------------------------------------GTAG..................................................................................................................................................2130.67200020
...........................................................................................................GAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GT....................................................................................................................................................2330.67202000
......................................................................................................................................................................................................................................................................GGTTTTAGGCTCCT------------GTGGGCAACGAG......................................2650.60303000
.....................................................................................................................................................................................................................................................................TGGTTTTAGGCTCCT------------GTGGGCAACGAGG.....................................2850.60303000
.....................................................................................................................................................................................................................................................................TGGTTTTAGGCTCCT------------GTGGG.............................................2050.60302010
.........................................................................................................................................................................................................................................................................TTTAGGCTCCT------------GTGGGCAACGAGG.....................................2450.60303000
.......................................................................................................CCTTGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------G.....................................................................................................................................................2620.50101000
..........................................................................................................................................................................................................................................................................TTAGGCTCCT------------GTGGGCAACGAGGGTC..................................2620.50100010
................................................................................................................................................................................................................................................................TTGTGTGGTTTTAGGCTC................................................................1820.50100010
.................................................................................................................................................................................................................................................................TGTGTGGTTTTAGGCTCCT------------GTGGGCAAT.........................................2820.50100001
............................................................................................................................................................................................................................................................GTTTTTGTGTGGTTTTAGGCTCCT------------G.................................................2520.50101000
..................................................................................TGACCCCGGATAACAATTGGGCCT........................................................................................................................................................................................................................................2420.50101000
......................................................................................................................................................................................................................................................ATCTTGGTTTTTGTGTGGTTTTAGG...................................................................2520.50100010
....................................................................................................................................................................................................TGGGAGGTATGTAGCAGGTACGCATT....................................................................................................................2620.50101000
...................................................................................................................................................................................................................................TCATTTGAACCTGGATAACATC.........................................................................................2220.50100010
.................................................................................................................................................................................................TGGTGGGAGGTATGTAGCAGGTACGA.......................................................................................................................2620.50101000
....................TAACATCTAGGCTTGAGTGTAGTT......................................................................................................................................................................................................................................................................................................2420.50101000
..........................................................................................GATAACAATTGGGCCTTGAAGTAGTT..............................................................................................................................................................................................................................2620.50100010
............................................................................................TAACAATTGGGCCTTGAAGTAGT...............................................................................................................................................................................................................................2320.50101000
........................................AGTTCTAGGCGTCTG---------TGGGCAACG.........................................................................................................................................................................................................................................................................2420.50101000
.....................................................................................................................................................................................................GGGAGGTATGTAGCAGGTACGCATT....................................................................................................................2520.50101000
..........................................TTCTAGGCGTCTG---------TGGGCAACGAGGA.....................................................................................................................................................................................................................................................................2620.50101000
........................................................................................................................................................................................................................................................................TTTTAGGCTCCT------------GTGGGCAACGAGGGT...................................2720.50100010
..................................................................GGCAACGAGGATCAGTTGACCCCGGA......................................................................................................................................................................................................................................................2620.50101000
...............................................................................................................................................................................................................................................GGATAACATCTTGGTTTTTGTGT............................................................................2320.50101000
...................................................................................................................................................................................................GTGGGAGGTATGTAGCAGGTACG........................................................................................................................2320.50101000
..........................................................................................................................................................................................................GTATGTAGCAGGTACGCATTCAGGAT..............................................................................................................2620.50101000
......................ACATCTAGGCTTGAGTGTAGTTCTAG..................................................................................................................................................................................................................................................................................................2620.50101000
.....................................TGTAGTTCTAGGCGTCTG---------TGGGCAAC..........................................................................................................................................................................................................................................................................2620.50101000
...................................................................................................................................................................................................................................................................TGTGGTTTTAGGCTCCT------------GTGGGCAATA........................................2720.50101000
....................................................CTG---------TGGGCAACGAGGATCAGTTGACCC..........................................................................................................................................................................................................................................................2720.50101000
..........................................................................................................................................................................................................................................................TGGTTTTTGTGTGGTTTTAGG...................................................................2120.50100010
........................................AGTTCTAGGCGTCTG---------TGGGCAACGAG.......................................................................................................................................................................................................................................................................2620.50101000
............................................................................................................................................................................................................................................................................AGGCTCCT------------GTGGGCAACGAGGGTCTG................................2620.50101000
.......................................TAGTTCTAGGCGTCTG---------TGGGCAACGAT.......................................................................................................................................................................................................................................................................2720.50101000
..........................................TTCTAGGCGTCTG---------TGGGCAACGAGG......................................................................................................................................................................................................................................................................2520.50101000
..........................................................................................................................................................................................................................CATTCAGGATCATTTGAACCTGGA................................................................................................2420.50101000
...............................................................................................................................................................................................................................................................................CTCCT------------GTGGGCAACGAGGGTCTG................................2320.50101000
................................................................................................................................................................................................TTGGTGGGAGGTATGTAGCAGGTACGCA......................................................................................................................2820.50101000
................................................................................................................................................................................................................................................................................TCCT------------GTGGGCAACGAGGGTCTGTGGA............................2620.50101000
..................................GAGTGTAGTTCTAGGCGTCTG---------TGG...............................................................................................................................................................................................................................................................................2420.50101000
............................................................................ATCAGTTGACCCCGGATAACAAT...............................................................................................................................................................................................................................................2320.50101000
..................................................................................................................................................................................................................................................................................................GGGCAACGAGGGTCTGTGGATCCTGGG.....................2720.50101000
..............................................................................CAGTTGACCCCGGATAACAATTGGGCCT........................................................................................................................................................................................................................................2820.50101000
................................TTGAGTGTAGTTCTAGGCGTCTG---------T.................................................................................................................................................................................................................................................................................2420.50101000
............................................................................................TAACAATTGGGCCTTGAAA...................................................................................................................................................................................................................................1920.50100010
.........................................GTTCTAGGCGTCTG---------TGGGCAACGAG.......................................................................................................................................................................................................................................................................2520.50101000
......................................................................ACGAGGATCAGTTGACCCCGGATAACAA................................................................................................................................................................................................................................................2820.50101000
...............................................................................................................................................................................................................................................................................................................CTGTGGATCCTGGGTAGCAACTCGGT.........2640.50202000
...................................................................................................................................................................................................................................................................TGTGGTTTTAGGCTCCT------------GTGGGCAA..........................................2520.50101000
................................................................................................................................................................................................................................................................................TCCT------------GTGGGCAACGAGGGTCTGTT..............................2420.50101000
...................................................................................................................................................................................................................................................................TGTGGTTTTAGGCTCCT------------GTGA..............................................2120.50101000
............................................CTAGGCGTCTG---------TGGGCAACGAGG......................................................................................................................................................................................................................................................................2320.50101000
.................................................................................................................................................................................................................................GATCATTTGAACCTGGATAA.............................................................................................2020.50101000
........................................AGTTCTAGGCGTCTG---------TGGGCAACGA........................................................................................................................................................................................................................................................................2520.50101000
..................................................................................................................................................................................................................................................................................................GGGCAACGAGGGTCTGTGGATCCTGG......................2620.50101000
...................................................TCTG---------TGGGCAACGAGGATCAGTTT..............................................................................................................................................................................................................................................................2420.50100010
....................TAACATCTAGGCTTGAGTGTAGTTCTG...................................................................................................................................................................................................................................................................................................2720.50101000
...........................................................................................................................................................................................................................................................GGTTTTTGTGTGGTTTTAGGCTCCT------------..................................................2520.50100010
......................................GTAGTTCTAGGCGTCTG---------TGGGCAA...........................................................................................................................................................................................................................................................................2420.50101000
.....................................................................................................................................................................................................................................................CATCTTGGTTTTTGTGTGGTTTTAG....................................................................2520.50101000
........................................................................................CGGATAACAATTGGGCCTTGAAGT..................................................................................................................................................................................................................................2420.50101000
...............................................................................................CAATTGGGCCTTGAAGTAGTTACTGG.........................................................................................................................................................................................................................2620.50100010
................................................................................................................................................................................................................................................................................TCCT------------GTGGGCAACGAGGGTCTG................................2220.50101000
............................................................................................................................................................................................................................................................................AGGCTCCT------------GTGGGCAACGAGGGT...................................2320.50101000
....................................................................................................................................................................................................................................................ACATCTTGGTTTTTGTGTGGTTTTAG....................................................................2620.50101000
.............................................TAGGCGTCTG---------TGGGCAACGAG.......................................................................................................................................................................................................................................................................2120.50101000
.....................................................................................................................................................................................................GGGAGGTATGTAGCAGGTACGCAT.....................................................................................................................2420.50101000
..........................................................................................................................................................................................................................................................TGGTTTTTGTGTGGTTTTAGGCTCCT------------G.................................................2720.50101000
...........................................TCTAGGCGTCTG---------TGGGCAACGAGGAT....................................................................................................................................................................................................................................................................2620.50101000
.................................................................................................................................................................................................................................................................................................................GTGGATCCTGGGTAGCAACTCGG..........2340.50202000
....................................................................................................................................................................................................TGGGAGGTATGTAGCAGGTACGCA......................................................................................................................2420.50101000
...................................................................................................................................................................................................................................................................................T------------GTGGGCAACGAGGGTCTGTGG.............................2220.50101000
...........................................TCTAGGCGTCTG---------TGGGCAACGAGG......................................................................................................................................................................................................................................................................2420.50101000
.............................................TAGGCGTCTG---------TGGGCAACGAGGAT....................................................................................................................................................................................................................................................................2420.50101000
.......................CATCTAGGCTTGAGTGTAGTTCTAGGC................................................................................................................................................................................................................................................................................................2720.50101000
...........................TAGGCTTGAGTGTAGTTCTAGGCGTCT............................................................................................................................................................................................................................................................................................2720.50101000
..............................................................................................................................................................................................................................................TGGATAACATCTTGGTTTTTGTGTGG..........................................................................2620.50101000
...........................................................................GATCAGTTGACCCCGGATAACAAT...............................................................................................................................................................................................................................................2420.50101000
...........................................TCTAGGCGTCTG---------TGGGCAACGAGGTAA...................................................................................................................................................................................................................................................................2720.50101000
...................................................TCTG---------TGGGCAACGAGGATCAGTTGATA...........................................................................................................................................................................................................................................................2720.50100010
...............................................................................................................................................................................................................................................................TTTGTGTGGTTTTAGGCTCCT------------G.................................................2220.50101000
....................TAACATCTAGGCTTGAGTGTAGTTCTAA..................................................................................................................................................................................................................................................................................................2820.50101000
.......................................................................................................................................................................................................GAGGTATGTAGCAGGTACGCATTCAGGA...............................................................................................................2820.50101000
..........................................................................................................................................................................................................................................................................TTAGGCTCCT------------GTGGGCAACGAGGGTCT.................................2720.50101000
...............................................................................................................................................................................................................................................................TTTGTGTGGTTTTAGGCTC................................................................1920.50100010
................................................................................................................................................................................................................AGCAGGTACGCATTCAGGAT..............................................................................................................2020.50101000
...........................................................................................................................................................................................................................................................................TAGGCTCCT------------GTGGGCAACGAGGGTCT.................................2620.50101000
............................................................................................TAACAATTGGGCCTTGAAG...................................................................................................................................................................................................................................1920.50100010
....................TAACATCTAGGCTTGAGT............................................................................................................................................................................................................................................................................................................1820.50101000
...................................................................................................................................................................................................................................................................TGTGGTTTTAGGCTCCT------------GTGGGC............................................2320.50100010
.........................TCTAGGCTTGAGTGTAGTTCTAGGC................................................................................................................................................................................................................................................................................................2520.50101000
.................................................................................................................................................................................................................................................................................................................GTGGATCCTGGGTAGCAACTCGGTTT.......2640.50202000
.......................................................................................................................................................................................................................................................TCTTGGTTTTTGTGTGGTTTTAGG...................................................................2420.50101000
....................................................................................................................................................................................................TGGGAGGTATGTAGCAGGTACGC.......................................................................................................................2320.50101000
.......................................TAGTTCTAGGCGTCTG---------TGGGCA............................................................................................................................................................................................................................................................................2220.50100010
....................................GTGTAGTTCTAGGCGTCTG---------TGGGCAA...........................................................................................................................................................................................................................................................................2620.50101000
...................................................................................................................................................................................................................................TCATTTGAACCTGGATAACATCT........................................................................................2320.50101000
...................................................................................................................................................................................................................................................................................................................GGATCCTGGGTAGCAACTCGGTTT.......2440.50202000
.................................................................................................................................................................................................................................................................................................TGGGCAACGAGGGTCTGTGGATC..........................2320.50100010
................................................................................................................................................................................................................................................................................TCCT------------GTGGGCAACGAGGGTCTGTG..............................2420.50101000
................................TTGAGTGTAGTTCTAGGCGTCTG---------TGGG..............................................................................................................................................................................................................................................................................2720.50100010
.........................................................................................................................................................................................................................................................................TTTAGGCTCCT------------GTGGGCAACGAGGGTC..................................2720.50101000
................................TTGAGTGTAGTTCTAGGCGTCTG---------TG................................................................................................................................................................................................................................................................................2520.50100010
...................................................................................................................................................................................................................................................................TGTGGTTTTAGGCTCCT------------GTGGGCA...........................................2420.50101000
...........................................................................................................................................................................................................................................................GGTTTTTGTGTGGTTTTAGGCTCCT------------GT................................................2720.50101000
.....................................TGTAGTTCTAGGCGTCTG---------TGGGC.............................................................................................................................................................................................................................................................................2320.50101000
.....................................TGTAGTTCTAGGCGTCTG---------TGGGCAATA.........................................................................................................................................................................................................................................................................2720.50101000
....................TAACATCTAGGCTTGAGTGTAGTTCTT...................................................................................................................................................................................................................................................................................................2720.50101000
...................................................................................................................................................................................................................................................................................T------------GTGGGCAACGAGGGTCTGTGGA............................2320.50100010
..........................................................................................................................................................................................................................................................................TTAGGCTCCT------------GTGGGCAACGAGGGT...................................2520.50101000
..........................................................................................................................................................................................................................................................................TTAGGCTCCT------------GTGGGCAACGAGGGA...................................2520.50101000
.................................................................................................................................................................................................................................................................................................TGGGCAACGAGGGTCTGTGG.............................2020.50101000
........................................................................................CGGATAACAATTGGGCCTTGAAG...................................................................................................................................................................................................................................2320.50101000
..................................................................................................TTGGGCCTTGAAGTAGTTACTGGTG.......................................................................................................................................................................................................................2520.50100010
............................................................................................TAACAATTGGGCCTTGAAGTAGTTT.............................................................................................................................................................................................................................2520.50100010
..............................................................................................................................................................................................................................................TGGATAACATCTTGGTTTTTGTGTGGTT........................................................................2820.50101000
...............................................................................................................................................................................................................................................................TTTGTGTGGTTTTAGGCTCCT------------GTGGT.............................................2620.50100010
.....................AACATCTAGGCTTGAGTGTAGTTCTG...................................................................................................................................................................................................................................................................................................2620.50101000
...................................................................................................................................................................................................................................................................................T------------GTGGGCAACGAGGGTCTGTGGAT...........................2420.50101000
..........................................................................................................................................................................................................................................................TGGTTTTTGTGTGGTTTTAGGCTCCA------------..................................................2620.50101000
.................................................................................................................................................................................................................................................................TGTGTGGTTTTAGGCTCCT------------GTGGGCA...........................................2620.50101000
...........................TAGGCTTGAGTGTAGTTCTAGGCGTC.............................................................................................................................................................................................................................................................................................2620.50101000
..............................................................................................................................................................................................................................................TGGATAACATCTTGGTTTTTGTGTG...........................................................................2520.50101000
.................................................CGTCTG---------TGGGCAACGAGGATCAGTTG..............................................................................................................................................................................................................................................................2620.50101000
.........................................................................................................................................................................................................GGTATGTAGCAGGTACGCATTCAGG................................................................................................................2520.50101000
.........................................................................................................................................................................................................................................................TTGGTTTTTGTGTGGTTTTAGGCTCCT------------G.................................................2820.50101000
...............................................................................................................................................................................................................................................................TTTGTGTGGTTTTAGGCTCCT------------GTGGGCA...........................................2820.50101000
.........................................................................................................................................................................................................................................................................TTTAGGCTCCT------------GTGGGCAACGAGGGT...................................2620.50100010
...................................................................................................................................................................................................GTGGGAGGTATGTAGCAGGTACGCA......................................................................................................................2520.50101000
....................................................................................................................................................................................................................................CATTTGAACCTGGATAACATCTTGG.....................................................................................2520.50101000
...........................................................................................................................................................................................................TATGTAGCAGGTACGCATTCAGG................................................................................................................2320.50100010
..................................................................................................................................................................................................GGTGGGAGGTATGTAGCAGGTACG........................................................................................................................2420.50101000
..................................................................................................................................................................................................................................................TAACATCTTGGTTTTTGTGTG...........................................................................2120.50101000
..............................................................................................ACAATTGGGCCTTGAAGTAGTTACTG..........................................................................................................................................................................................................................2620.50100010
..................................................................................................................................................................................................GGTGGGAGGTATGTAGCAGGTACGC.......................................................................................................................2520.50101000
......................................................................................................................................................................................................................................................................GGTTTTAGGCTCCT------------GTGGGCAACG........................................2450.40202000
.....................................................................................................................................................................................................................................................................TGGTTTTAGGCTCCT------------GTGGGCAACGAGA.....................................2850.40202000
......................................................................................................................................................................................................................................................................GGTTTTAGGCTCCT------------GTGGGCAACGAGG.....................................2750.40202000
..............................................................................................................................TG------------------------------------------------------------GTAGTTGGTGGGAGGTATG...................................................................................................................................2130.33100010
......................................................................................................................TGGTGTCCTG------------------------------------------------------------GTAGTTGGTGG...........................................................................................................................................2130.33100010
........................................................................................................CTTGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTAG..................................................................................................................................................2830.33101000
................................................................................................................................................................................................TTGGTGGGAGGTATGTAGCAGGTA..........................................................................................................................2430.33100010
.........................................................................................................TTGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GT....................................................................................................................................................2530.33101000
..........................................................................................................TGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTAA..................................................................................................................................................2630.33100010
...............................................................................................................TAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTTGTAA............................................................................................................................................2730.33100010
................................................................................................................................................................................................TTGGTGGGAGGTATGTAGCAG.............................................................................................................................2130.33101000
..........................................................................................................TGAAGTAGTTACTGGTGTCCTG------------------------------------------------------------GTTA..................................................................................................................................................2630.33101000
......................................................................................................................TGGTGTCCTG------------------------------------------------------------GTAGTTGGTGGG..........................................................................................................................................2230.33100010
...............................................................................................................TAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTTGGCA............................................................................................................................................2730.33101000
............................................................................................................AAGTAGTTACTGGTGTCCTG------------------------------------------------------------G.....................................................................................................................................................2130.33101000
..........................................................................................................TGAAGTAGTTACTGGTGT......................................................................................................................................................................................................................1830.33100010
...............................................................................................................TAGTTACTGGTGTCCTG------------------------------------------------------------GTAGTTGGTGG...........................................................................................................................................2830.33101000
...........................................................................................................................TCCTG------------------------------------------------------------GTAGTTGGTGGGAGGT......................................................................................................................................2130.33101000
droVir3
GAACATCGGTAGATCCAGGATAACAGTTGGGCGAAGCAGTCGTCTTTGGCTGTTG---------TGGACAGCGAGGATCGGTTGAGCCTGGATAACACCTTGGCTTAGTCGGTGTTACTGGTGG---------------------------------------------------------ACGAACTGTAGTTGGAGGCAAGTAAGTTGCAGGTTGACAATCGGGATCTGTTGAACCAGGATAGCAACGGGGCTTCGATGTGGTCTTGGGCTCTT------------GTGGACAACGAGGGTCACTCGATCCAGGATAGCAGTTGGGCGAA------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................GATAACAGTTGGGCGAAGCAG...........................................................................................................................................................................................................................................................................................................2120.501000000010000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................GTGGACAACGAGGGTCACTCG.............................2130.331000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TTGACAATCGGGATCTGTTGAAC.....................................................................................................2330.331100000000000000000000000000000000000000000000000000000000000000
............................GGGCGAAGCAGTCGTCTTTGGC................................................................................................................................................................................................................................................................................................2240.251000000010000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TGAACCAGGATAGCAACGG.......................................................................................1950.201000000000000000000000000000010000000000000000000000000000000000
.....................................................TG---------TGGACAGCGAGGATCGGTTG..............................................................................................................................................................................................................................................................2250.201000000010000000000000000000000000000000000000000000000000000000
....................................................TTG---------TGGACAGCGAGGATCGGT................................................................................................................................................................................................................................................................2150.201000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TGAACCAGGATAGCAACGGG......................................................................................2050.201000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GTCTTGGGCTCTT------------GTGGAC............................................1950.201000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CGGGGCTTCGATGTGGTCC.......................................................................1970.141000000000000000000001000000000000000000000000000000000000000000
droMoj3
GAGGATCACGTGCTCCAGGATAGCAATTAGGCGCAGCTGTCGTTTTCGGCTCTTG---------AGGACAACGAGGATCAGTTGAGCCCGGATAGCATCTTGGTTTTGTAGTTGTCACAGGTGG---------------------------------------------------------ACTTCTGGTAGTTGGAGGCAGATAAGTAGCTGGCTGGCAATCAGGATCTGTGGATCCTGGAAGGCAACGTGTCCTTTGTGTAGTTATGGGCTCCC------------GTGGGCAACGAGGATCTCGTGATCCAGGATAGCAGTTTGGTGCA------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GAGGGTCAGTAGATCCTGGGTAGCAGTTAGGCGAAGCAGTTGTCTTTGGCTGTTG---------TGGACAACGAGGATCGCTTGAGCCAGGATAGCAGCTTGGCTTAGACGTTGTTACTATTGG---------------------------------------------------------TCGAACTGTAGTTGGAGGCAAGTAGGTGGCTGGTTGGCAATCGGGATCAGTTGAGCCTGGATAACAACGAGGTTTCGATGTGGTTTTGGGCTGTT------------GTGGACAACGAGGGTCAGTAGATCCTGGGTAGCACTTAGGCGAA------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
CAGGATCGGATGAGCCGGGATAGCAACGTGGCTTCAGTGTCGATGCGGGTTCTTG---------AGGGCATCGAGGATCGGTTGAACCTGGGTAACACCGTGGTTTGGGTCTATCTACTGGTGT---------------------------------------------------------TTTGATCGTTGTTGGAGGCAGGTAAGTTGCGGGCTGACACTCTGGATCTGATGAGCCAGGATAACATCTCGGCTTTTTTGTCGTTGCGGGCTTCT------------GAGGACATCGAGGATCGGTAGACCCTGGGAAGCACTGTGGTTTG------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................CGTTGTTGGAGGCAGGTAAGTA.................................................................................................................................2270.1410100000000
......................................................................................................................TGGTGT---------------------------------------------------------TTTGATCGTTGTTGG..............................................................................................................................................2170.1410100000000
.............................................................................................................................................................................................................AGTTGCGGGCTGACACTCTG.................................................................................................................2080.1310100000000
droPer2
CAGGATCGGATGAGCCGGGATAGCAACGTGGCTTCAGTGTCGATGCGGGTTCTTG---------AGGGCATCGAGGATCGGTTGAACCTGGGTAACACCGTGGTTTGGGTCTATCTACTGGTGT---------------------------------------------------------TTTGATCGTTATTGGAGGCAGGTAAGTTGCGGGCTGACACTCTGGATCTGATGAGCCAGGATAACATCTCGGCTTTGTTGTAGTTGCTGGCCTCT------------GAGGACATCGAGGATCGGTCGATCCTGGATAGCATTTCGGT---------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CTGGATCAGGTGAGCCCGGATAACATCTCGGCCTCTGGGTCGTTACTGGGACCTG---------GGGGCAACGTTTGTCGGTGGAACCTGGATAACAATTCGGCTTGGAAGTAGTCACAGGCGTTCTT------------------------------------------------------------GTCGTGGGGGGAGAATATGTGGCAGGTTGGCAGCTCGGGTCCGACGATCCAGGATAGCATCTAGGCCTCGGCGTAGTCACTGGGATCT------------GAGGACAGCGCCTATCTGTGGATCCGGGATAACAATTTGGCTTA------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................GTCCGACGATCCAGGATG..............................................................................................1811.001100000
..................................................................................................................................................................................................GGGGGAGAATATGTGGGG..............................................................................................................................18130.081001000
droBip1
TGGGATCCGGTGATCCAGGATAACACCTAGGCTTTGGAGTGGTTACTGGTATTTG---------TGGACAGCGACTATCTGTAGATCCAGGATAACAATTTGGCTTGGAAGTAGTTACGGGAGTCCTG------------------------------------------------------------GTC---------------GTAGCCGGCTGACATTCAGGATCACTCGAGCCCGGATAACATCTTGGCCTCAAGGTTGTTGCCG------------------GCTGACATTCCGGGTCTGGTGATCCTGGATAGCACCTAGGCC--------SizeHit CountTotal NormTotal
No Reads
droKik1
AGGAATCGT--GGTCCTTGCAGATACTGGAG--ATTGAGTCG------TGACTCT---------GGGGCACCGGCTGTCAGTCGCGCCCGGGAAGCAATCGGGCCTGGCAGTGGTTATTTGAGTCCTCGAGGTTGGAGGAGCGTAAGTAATTGGTGTGGTTGGCTTCGTTGGAATTGATACTCTCCTTGTTGACGGTGGGAGATAAGTGGCCGGCTGGCATTTTATGTCGTCGGAGCCCTCGGAGCACCCGGCCCTT---------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CAGGATCATCGGAGCCTGGATAACATCTTGGCTTTTGTGTGGTTAATGGTGCCCGTGTTCTGGGTTGACATTCAGGATCAGTTGATCCGGGATAACAACGGGGTTTCGGTGTGGTCACCGGAAT---------------------------------------------------------TCTCCTCGTTGTTGGTGGAAGGTAAGTGGCCGGCTGGCATTCTGGATCCTCAGAACCAGGATAACATCTTGGCTTTGATGTGGTTATAGGTGCTCGA---GTCCTGGGCTGGCAGCTTGGATCGGTAGATCCCGGATAACACCTTGGTTTT------SizeHit CountTotal NormTotal
No Reads
droEle1
CAGGATCTGGTGATCCCGGATAACATCTGGGCTTTGGAGTCGTTGGCGGTTTTTG---------TGGGCAACGACTATCTGTTGAGCCCGGATAACAGTTGGGCTTCGATGTAGTGGAAGGTCTTCG------------------------------------------------------------TGTTGTCGGAGGCAAGTAAGTAGCTGGTTGGCAATCAGGATCATTCGAGCCCGGATAACAACGTGGTTTGGGTGGCGGAATTGTTGTTCGCACCGTAGCTGGCTGGCATTCCGGGTCCGTTGAGCCGGGATAGCACCTGGGCTTT------SizeHit CountTotal NormTotal
No Reads
droRho1
CAGGGTCCTTTGAGCCTGGGTAACATCTCGGTTTTGGTGACGTCACTGGTTCCTG---------TGGACAGCGTCTATCCGTCGAGCCAGGGTAACAATTTGGCTTGGAAGTAGTTACGGGAGTCCTT------------------------------------------------------------GTAGTCGGAGGAGAGTAAGTTGCTGGTTGGCACTCTGGATCGTTGGAGCCAGGATAACATCTTGGCCTTAAAGTTGTTGGTT------------------GTTCGCAAGCAGGATCAGAAGACCCGGCGTAACAACTTGGTGTT------SizeHit CountTotal NormTotal
No Reads
droBia1
CGGGATTAGGTGAGCCTGGGTAACACCTTGGCTTTTGAGTCGTCACTGGTTCCTG---------TGGGCAACGCCTATCTGTCGATCCTGGATAACAGTTTGGCTTGGAAGTGGTCACAGGAGTCCTT------------------------------------------------------------GTAGTGGGAGGAGAGTAGGTAGCTGGCTGACATTCTGGATCACTTGAGCCAGGATAACATCTCGGCCTCAAAGTGGTTACGGTGGCTCTG---GTTGAAGGTTGGCAGTCAGGATCAGGAGATCCCGGGTAGCACCTCGGTGTGGTAACCSizeHit CountTotal NormTotal
No Reads
droTak1
AAGGATCATTTGAACCCGGATAGCAACGTGGCTTGGTTGTAGTGATAGGAGTTCT------TGTCGTGCAGTCAGGATCATTGGAGCCCGGATAACATCTTGGCCTAGCTGTAGGAA---------------------------------------------------------------------TCGTTACTGGTGGGAGGTAAGTAGCCGGTTGACAATCAGGGTCCCTCGAGCCTGGGTAACATCTAGGTTTCTCTGTAGTTACAGGTTCCT------------GTGGACAGCGTCTGTCCGTAGATCCCGGATAACAGTTTGGCTTG------SizeHit CountTotal NormTotal
No Reads
droEug1
TAGGATCTGTTGATCCCGGGAAACATCTTGGTTTTGGTGTCGTTGGTGGTTTTTG---------GGGACAACGACGATCAGTTGATCCCGGATAACAATTTGGCTTTGAAGTAGTTACAGGTGTCCGA------------------------------------------------------------GTTGTTGGTGG---TTGAGTTGGTTGCGGACAGCTGGGATCAGTTGATCCAGGATAGCACCTTGGCTTAGGTGCAATTGTTGGAG---------------GTTGGCAACTAGGATCATTGGAACCCGGATAACACCTTGGCTTG------SizeHit CountTotal NormTotal
No Reads
dm3
CAGGATCTGAAGAACCAGGGGAGCACTTCGGTTTTAGAGTAGTAGGTGGCTTCTG---------GGGACAGCGACTATCGGTGGAGCCTGGATAACAATTTGGCTTGGATGTTGTCACAGGTGTTCTA------------------------------------------------------------GTTGTAGGAGGTGAGTATGTGGCCTTTTGACATTCTGGGTTTGGTGAGCCAGGGTAACATCTAGGCTTTGGTGTTGTAACGGGTTCCT------------TTGGACAGCGTCGGTCTGTTGAGCCCGGATAGCAATTTGGCTTT------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................GGACAGCGTCGGTCTGTTG.............................1912.0020000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TGACATTCTGGGTTTGGTGAGCCAGGG................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................GACAGCGTCGGTCTGTTGAGC..........................2111.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GGACAGCGACTATCGGTGGAGCCTGG.......................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TGAGCCCGGATAGCAATTTGGCTT.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................TTTGGTGAGCCAGGGTAACATCTAGG.....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................CGGGTTCCT------------TTGGACAGCGTCG.....................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GCCCGGATAGCAATTTGATA........2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCGGATCTGAAGAGCTAGGGGAGCACTTCGGTTTTAGCGTAGTAGGTGGTTTCTG---------GGGACAGCGACTATCGGTGGAGCCTGGATAACAATTTGGCTTGGATGTTGTCACAGGTGTTCTA------------------------------------------------------------GTTGTAGGAGGCGAGTATGTGGCCGGTTGACATTCTGGGTTTGGTGAGCCAGGGTAACATCTAGGCTTTGGTGTTGTAACGGGTTCCT------------TTGGACAGCGTCGGTCTGTTGAGCCCGGATAGCAATTTGGCTTT------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................CCGGATAGCAATTTG...........1512.00200000002000000000
.........................................................................................................................................................................................................................................................................................................................CGGATAGCAATTTGA..........1560.17100000000100000000
droSec2
GACTATCGGTGGATCCAGGATAACAATTTGGTTTCCTTGTTGTTGGTGGC---------------TGGCAATACGGATCGCTTGAACCAGGATAACACCTTGGTTTGGTAGTAGCAATCGTTGT---------------------------------------------------------TCTTGCTGTCGTTGGTGGAAGGTAAGTTGCAGGCTGACAGTCAGGATCTGTGGATCCAGGGTAACACCTAGGTTGCGGCGTAGTTCGCGGTGTCT------------GCGGGCAGCGACTATCTGTGGAGCCCGGATAACAGTTTGGCTTA------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CGGGATCAGAGGATCCCGGGAAACACCTCGGTCGTTGCGTAGTTAGCGGTGTCAG------AGGTTGGCAACTAGGATCACTGGAACCCGGGTAACACCTTGGCCTCGACGTTGTAATTGTCGT---------------------------------------------------------TCGAGCCGTAGTTGGTGGGAGATAAGTAGCAGGCTGACATTCGGGGTCCGTTGAGCCAGGATAACATCTCGGCTTTAATGTCGTCACGAGGTCTT------------GTGGGCAGCGTCTGTCTGTCGACCCCGGATAACAATTTGGCTTG------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................CGAGGTCTT------------GTGGGCAGCGTCTGTCT.................................2611.00101000000000
droEre2
CAGGGTCAGTGGATCCTTGATAACATCTTGGCAGCGATGTGGTAATCGTTGGCCTTGTTCTCGGTTGACAGTCGGGATCTGTTGATCCCGGGTAACAACGTGGCCTCTTCGTAGTAATGGGAGC---------------------------------------------------------TTTCCTCGTTGTAGGCGGAATATAAGTTGCCGGCTGACATTCGGGGTCATCGGAGCCTGGATAGCATCTTGGCTTCATTGTGGTAATAGGTGTCCTT---GTTGCCGGTTGACAAATAGGATCTGTTGATCCTGGATAGCAACGCGGCTTG------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 11:23 PM