ID:

dwi_51

 Coordinate:

scf2_1100000004521:11550528-11550586 +

 Confidence:

confident

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-37.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATGAGAACCAATCTTTATTTGATATCATATTGATAACTTAATTGAAATCAAAGGACATATCCTGCATACGGTTGGCTTTGAAATACTGCATGCAGGATATGTTCTTTGTTTTTAATTTGATTTTTCCATCATTAATGCATTAATTTTAATTTTTGAGCT

***********************************....((((((((.(((((((((((((((((((.((((............)))).))))))))))))))))))).))))))))......************************************ 		Read size # Mismatch Hit Count Total Norm Total M045

female body

 V119

head

 V117

male body		 V118

embryo

 M020

head
......................................................................................TGCATGCAGGATATGTTCTTTG................................................... 22 0 1 14139.00 14139 12369 1252 340 122 56
.......................................................................................GCATGCAGGATATGTTCTTTG................................................... 21 0 1 780.00 780 770 9 1 0 0
.......................................................................................GCATGCAGGATATGTTCTTTGT.................................................. 22 0 1 253.00 253 220 15 16 2 0
..................................................AAGGACATATCCTGCATACGGT....................................................................................... 22 0 1 251.00 251 221 12 3 3 12
..................................................AAGGACATATCCTGCATACGG........................................................................................ 21 0 1 172.00 172 158 0 0 0 14
........................................................................................CATGCAGGATATGTTCTTTGTT................................................. 22 0 1 119.00 119 92 6 1 0 20
.......................................................................................GCATGCAGGATATGTTCTTTGTT................................................. 23 0 1 117.00 117 114 0 0 0 3
.................................................AAAGGACATATCCTGCATACGG........................................................................................ 22 0 1 74.00 74 73 0 0 0 1
......................................................................................TGCATGCAGGATATGTTCTTT.................................................... 21 0 1 69.00 69 61 8 0 0 0
......................................................................................TGCATGCAGGAGATGTTCTTTG................................................... 22 1 1 63.00 63 63 0 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTTGT.................................................. 23 0 1 47.00 47 43 2 2 0 0
......................................................................................TGCATGCAGGAAATGTTCTTTG................................................... 22 1 1 37.00 37 36 1 0 0 0
......................................................................................TGCATGCAGGATATGTTCTT..................................................... 20 0 1 35.00 35 35 0 0 0 0
........................................................................................CATGCAGGATATGTTCTTTG................................................... 20 0 1 32.00 32 32 0 0 0 0
.....................................................................................CTGCATGCAGGATATGTTCTTTG................................................... 23 0 1 29.00 29 28 1 0 0 0
...................................................AGGACATATCCTGCATACGGT....................................................................................... 21 0 1 24.00 24 24 0 0 0 0
..........................................................................................TGCAGGATATGTTCTTTG................................................... 18 0 1 21.00 21 19 1 1 0 0
.......................................................................................TCATGCAGGATATGTTCTTTG................................................... 21 1 1 19.00 19 17 1 0 1 0
................................................CAAAGGACATATCCTGCATACG......................................................................................... 22 0 1 19.00 19 19 0 0 0 0
......................................................................................CGCATGCAGGATATGTTCTTTG................................................... 22 1 1 18.00 18 8 10 0 0 0
...................................................AGGACATATCCTGCATACGG........................................................................................ 20 0 1 18.00 18 18 0 0 0 0
......................................................................................TGCATGCAGGATATGCTCTTTG................................................... 22 1 1 17.00 17 11 5 1 0 0
........................................................................................CATGCAGGATATGTTCTTTGT.................................................. 21 0 1 17.00 17 16 0 1 0 0
......................................................................................TGCATGCAGGATATTTTCTTTG................................................... 22 1 1 17.00 17 13 4 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTTGG.................................................. 23 1 1 16.00 16 16 0 0 0 0
.........................................................................................ATGCAGGATATGTTCTTTG................................................... 19 0 1 16.00 16 16 0 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTTGA.................................................. 23 1 1 16.00 16 10 0 1 0 5
.....................................................................................TTGCATGCAGGATATGTTCTTTG................................................... 23 1 1 15.00 15 15 0 0 0 0
......................................................................................TCCATGCAGGATATGTTCTTTG................................................... 22 1 1 14.00 14 11 2 1 0 0
......................................................................................TGCATGCAGGATATGTTCT...................................................... 19 0 1 14.00 14 14 0 0 0 0
......................................................................................TGCATGCAGGACATGTTCTTTG................................................... 22 1 1 14.00 14 12 0 2 0 0
......................................................................................TGCATTCAGGATATGTTCTTTG................................................... 22 1 1 13.00 13 9 2 0 1 1
......................................................................................TTCATGCAGGATATGTTCTTTG................................................... 22 1 1 13.00 13 11 1 1 0 0
......................................................................................TGCATGCAGGATATGTTCCTTG................................................... 22 1 1 12.00 12 7 5 0 0 0
......................................................................................TGCATGCAGGGTATGTTCTTTG................................................... 22 1 1 11.00 11 6 3 2 0 0
.....................................................................................GTGCATGCAGGATATGTTCTTTG................................................... 23 1 1 11.00 11 11 0 0 0 0
.....................................................................................ATGCATGCAGGATATGTTCTTTG................................................... 23 1 1 11.00 11 11 0 0 0 0
......................................................................................TGCATGCAGGATATGTCCTTTG................................................... 22 1 1 11.00 11 7 4 0 0 0
.........................................................................................ATGCAGGATATGTTCTTTGTT................................................. 21 0 1 11.00 11 11 0 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTTT................................................... 22 1 1 10.00 10 8 2 0 0 0
......................................................................................TGCATGCAGGATGTGTTCTTTG................................................... 22 1 1 9.00 9 6 2 1 0 0
..................................................AAGGACATATCCTGCATACG......................................................................................... 20 0 1 9.00 9 9 0 0 0 0
......................................................................................TGCATGCAGGATATGTTATTTG................................................... 22 1 1 8.00 8 2 6 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTG.................................................... 21 1 1 8.00 8 5 1 1 1 0
......................................................................................TGCATGCGGGATATGTTCTTTG................................................... 22 1 1 8.00 8 7 1 0 0 0
......................................................................................GGCATGCAGGATATGTTCTTTG................................................... 22 1 1 8.00 8 3 5 0 0 0
......................................................................................TGCATACAGGATATGTTCTTTG................................................... 22 1 1 8.00 8 4 4 0 0 0
.....................................................................................CTGCATGCAGGATATGTTCTTT.................................................... 22 0 1 8.00 8 8 0 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTTA................................................... 22 1 1 7.00 7 4 3 0 0 0
......................................................................................TGCATGCAGGATACGTTCTTTG................................................... 22 1 1 7.00 7 4 0 3 0 0
......................................................................................TGCATGCAGGCTATGTTCTTTG................................................... 22 1 1 6.00 6 0 6 0 0 0
......................................................................................TGCATCCAGGATATGTTCTTTG................................................... 22 1 1 6.00 6 6 0 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTCG................................................... 22 1 1 6.00 6 5 1 0 0 0
......................................................................................TGCATGCATGATATGTTCTTTG................................................... 22 1 1 6.00 6 5 1 0 0 0
......................................................................................TGCATGTAGGATATGTTCTTTG................................................... 22 1 1 5.00 5 5 0 0 0 0
......................................................................................TACATGCAGGATATGTTCTTTG................................................... 22 1 1 5.00 5 3 0 2 0 0
......................................................................................TGCATGCACGATATGTTCTTTG................................................... 22 1 1 5.00 5 4 1 0 0 0
......................................................................................TGCGTGCAGGATATGTTCTTTG................................................... 22 1 1 5.00 5 3 0 1 1 0
......................................................................................TGCATGCAGTATATGTTCTTTG................................................... 22 1 1 5.00 5 4 1 0 0 0
..................................................AAGGACATATCCTGCATACGGTT...................................................................................... 23 0 1 4.00 4 3 0 0 0 1
......................................................................................TGCATGCAGGATATGTTC....................................................... 18 0 1 4.00 4 4 0 0 0 0
......................................................................................TGCATGCAAGATATGTTCTTTG................................................... 22 1 1 4.00 4 1 3 0 0 0
......................................................................................TGCATGCCGGATATGTTCTTTG................................................... 22 1 1 4.00 4 0 3 1 0 0
......................................................................................TGCATGCAGGATCTGTTCTTTG................................................... 22 1 1 4.00 4 0 3 1 0 0
......................................................................................TGCACGCAGGATATGTTCTTTG................................................... 22 1 1 4.00 4 4 0 0 0 0
......................................................................................TGCATGCAGGATAAGTTCTTTG................................................... 22 1 1 4.00 4 3 1 0 0 0
.......................................................................................GCATGCAGGATATGTTCTTTGTA................................................. 23 1 1 4.00 4 4 0 0 0 0
......................................................................................TGTATGCAGGATATGTTCTTTG................................................... 22 1 1 4.00 4 3 1 0 0 0
.................................................AAAGGACATATCCTGCATACG......................................................................................... 21 0 1 4.00 4 4 0 0 0 0
.......................................................................................GCATGCAGGATATGTTCTTT.................................................... 20 0 1 3.00 3 3 0 0 0 0
......................................................................................TGCATGCAGGATATGTTGTTTG................................................... 22 1 1 3.00 3 2 1 0 0 0
..................................................AAGGACATATCCTGCATACGGG....................................................................................... 22 1 1 3.00 3 1 0 0 0 2
......................................................................................TGCATGCAGGATATGTTTTTTG................................................... 22 1 1 3.00 3 0 3 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTTC................................................... 22 1 1 3.00 3 2 1 0 0 0
......................................................................................TGCATGCAGGATATGATCTTTG................................................... 22 1 1 3.00 3 3 0 0 0 0
.......................................................................................GCATGCAGGATGTGTTCTTTG................................................... 21 1 1 3.00 3 3 0 0 0 0
......................................................................................TGAATGCAGGATATGTTCTTTG................................................... 22 1 1 3.00 3 1 2 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTTGC.................................................. 23 1 1 3.00 3 3 0 0 0 0
.......................................................................................GCATGCAGGATATGTTCTT..................................................... 19 0 1 2.00 2 2 0 0 0 0
....................................................................................AGTGCATGCAGGATATGTTCTTTG................................................... 24 1 1 2.00 2 2 0 0 0 0
......................................................................................TGCATGCAGGATTTGTTCTTTG................................................... 22 1 1 2.00 2 2 0 0 0 0
................................................CAAAGGACATATCCTGCATAC.......................................................................................... 21 0 1 2.00 2 1 0 0 0 1
......................................................................................TGCATGCAGGATATGTTCTTTGTA................................................. 24 1 1 2.00 2 0 0 0 0 2
......................................................................................TGCATGCAGGATATATTCTTTG................................................... 22 1 1 2.00 2 1 1 0 0 0
......................................................................................TGCAGGCAGGATATGTTCTTTG................................................... 22 1 1 2.00 2 1 0 1 0 0
......................................................................................AGCATGCAGGATATGTTCTTTG................................................... 22 1 1 2.00 2 1 1 0 0 0
......................................................................................TGCATGCAGGATATGTTCTATG................................................... 22 1 1 2.00 2 1 1 0 0 0
......................................................................................TGCATGCAGGATATGGTCTTTG................................................... 22 1 1 2.00 2 2 0 0 0 0
.......................................................................................GCATGCAGGATACGTTCTTTG................................................... 21 1 1 2.00 2 2 0 0 0 0
....................................................GGACATATCCTGCATACGGT....................................................................................... 20 0 1 2.00 2 2 0 0 0 0
....................................................................................AATGCATGCAGGATATGTTCTTTG................................................... 24 1 1 2.00 2 2 0 0 0 0
.......................................................................................GCATGCAGGGTATGTTCTTTGT.................................................. 22 1 1 2.00 2 2 0 0 0 0
......................................................................................TGCATGCAGGATATCTTCTTTG................................................... 22 1 1 2.00 2 1 0 1 0 0
......................................................................................TGCATGCAGGATATGTTCTCTG................................................... 22 1 1 2.00 2 1 1 0 0 0
......................................................................................TGCATGCAGGTTATGTTCTTTG................................................... 22 1 1 2.00 2 1 1 0 0 0
....................................................GGACATATCCTGCATACGG........................................................................................ 19 0 1 2.00 2 2 0 0 0 0
..................................................................................ATAATGCATGCAGGATATGTTCTTTG................................................... 26 1 1 1.00 1 1 0 0 0 0
..................................................AAGGACATATCCTGCATACGGA....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
...................................................AGGACATATCCGGCATACGG........................................................................................ 20 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTTTC.................................................. 23 2 1 1.00 1 1 0 0 0 0
..................................................................................TTGTTGCATGCAGGATATGTTCTTTG................................................... 26 3 1 1.00 1 1 0 0 0 0
..................................................AAGGACATATCCTGCATACGGC....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
...................................................AGGACATATCCTGCATACGGC....................................................................................... 21 1 1 1.00 1 1 0 0 0 0
......................................................................................TGGATGCAGGATATGTTCTTTG................................................... 22 1 1 1.00 1 1 0 0 0 0
..................................................AAGGACATATACTGCATACGGT....................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..................................................AAGGACATATCCTGCATACGGTA...................................................................................... 23 1 1 1.00 1 1 0 0 0 0
........................................................................................CATGCAGGATATGTTATTTGTT................................................. 22 1 1 1.00 1 1 0 0 0 0
.......................................................................................GCATGCAGGATATTTTCTTTG................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................................................................ATGGTGCATGCAGGATATGTTCTTTG................................................... 26 2 1 1.00 1 1 0 0 0 0
.................................................AAAGGACATATCCTGCATACGGC....................................................................................... 23 1 1 1.00 1 1 0 0 0 0
..................................................................................AGGGTGCATGCAGGATATGTTCTTTG................................................... 26 3 1 1.00 1 1 0 0 0 0
....................................................................................TGTGCATGCAGGATATGTTCTTTG................................................... 24 2 1 1.00 1 1 0 0 0 0
..................................................AAGGACATATCCTGTATACGGT....................................................................................... 22 1 1 1.00 1 0 1 0 0 0
...................................................................................TCCTGCATGCAGGATATGTTCTTTG................................................... 25 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCACGATATGTTCTTT.................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................................................................ATACTGCATGCAGGATATGTTCTTTG................................................... 26 0 1 1.00 1 1 0 0 0 0
........................................................................................CATGCAGGATAGGTTCTTTG................................................... 20 1 1 1.00 1 1 0 0 0 0
.........................................................................................ATGCAGGATATGTTCTTTGT.................................................. 20 0 1 1.00 1 0 0 1 0 0
.......................................................................................GCATGCAGGATATGATCTTTGT.................................................. 22 1 1 1.00 1 0 1 0 0 0
..................................................AAGGACATATCCTGCATCGG......................................................................................... 20 2 1 1.00 1 1 0 0 0 0
..........................................................................................TGCAGGATATGTTCTTTGTT................................................. 20 0 1 1.00 1 1 0 0 0 0
........................................................................................AATGCAGGATATGTTCTTTG................................................... 20 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCCTGCAGGATATGTTCTTTG................................................... 22 1 1 1.00 1 0 1 0 0 0
.......................................................................................GCATGCAGGATATGTTCT...................................................... 18 0 1 1.00 1 1 0 0 0 0
.................................................CAAGGACATATCCTGCATACGGT....................................................................................... 23 1 1 1.00 1 1 0 0 0 0
.....................................................................................TTGCATGCAGGATATGTTCTT..................................................... 21 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGATATGTTCTC..................................................... 20 1 1 1.00 1 1 0 0 0 0
...................................................AGGACATATCCTGCATACG......................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.......................................................................................GCATGCACGATATGTTCTTTGT.................................................. 22 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGAAGGATATGTTCTTTG................................................... 22 1 1 1.00 1 1 0 0 0 0
...................................................................................GACTGCATGCAGGATATGTTCTTTG................................................... 25 1 1 1.00 1 1 0 0 0 0
..................................................AAGGACATATCCTGCATA........................................................................................... 18 0 1 1.00 1 0 0 0 0 1
......................................................................................TGCATGCAGGATATGTTCTTTGTAT................................................ 25 1 1 1.00 1 1 0 0 0 0
.......................................................................................ACATGCAGGATATGTTCTTTGT.................................................. 22 1 1 1.00 1 1 0 0 0 0
.................................................................................CGTGCTGCATGCAGGATATGTTCTTTG................................................... 27 3 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGATATTTTCTTTA................................................... 22 2 1 1.00 1 0 1 0 0 0
...................................................AGGACATATCCTGCATACGGTTT..................................................................................... 23 1 1 1.00 1 1 0 0 0 0
......................................................................................AGCATGGAGGATATGTTCTTTG................................................... 22 2 1 1.00 1 0 1 0 0 0
...................................................................................GTCTGCATGCAGGATATGTTCTTTG................................................... 25 2 1 1.00 1 1 0 0 0 0
.......................................................................................GCATGCAGAATATGTTCTTTGT.................................................. 22 1 1 1.00 1 1 0 0 0 0
.......................................................................................ACATGCAGGATATGTTCTTTG................................................... 21 1 1 1.00 1 1 0 0 0 0
......................................................................................AACATGCAGGATATGTTCTTTG................................................... 22 2 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCATGAGATGTTCTTTG................................................... 22 2 1 1.00 1 1 0 0 0 0
.......................................................................................CCATGCAGGATATGTTCTTTG................................................... 21 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGATAGGTTCTTTG................................................... 22 1 1 1.00 1 0 0 0 1 0
..................................................AAGGACATATCGTGCATACGG........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
.................................................................................CCGACTGCATGCAGGATATGTTCTTTG................................................... 27 3 1 1.00 1 1 0 0 0 0
....................................................................................GCTGCATGCAGGATATGTTCTTTG................................................... 24 1 1 1.00 1 1 0 0 0 0
.......................................................................................GCATGCAGGATATGTTCTTTGG.................................................. 22 1 1 1.00 1 1 0 0 0 0
......................................................................................TTCATGCAGGATATGTTCTTTGA.................................................. 23 2 1 1.00 1 0 0 0 0 1
..................................................AAGGACATATCCTGCATGCGG........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
....................................................................................GTTGCATGCAGGATATGTTCTTTG................................................... 24 2 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGAATATGTTCTTTG................................................... 22 1 1 1.00 1 0 1 0 0 0
.....................................................................................CTGCATGCAGGATATGTT........................................................ 18 0 1 1.00 1 1 0 0 0 0
....................................................................................TCTGCATGCAGGATATGTTCTTTG................................................... 24 1 1 1.00 1 1 0 0 0 0
.....................................................................................CTGCATGCAGGATATGTTCTT..................................................... 21 0 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGATATGTACTTTG................................................... 22 1 1 1.00 1 1 0 0 0 0
.......................................................................................GCATGCAGGATATGCTCTTTG................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................................GAGGACATATCCTGCATACGG........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
................................................CAAAGGACATATCCTGCATACGG........................................................................................ 23 0 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGATGTGTTCTTT.................................................... 21 1 1 1.00 1 0 1 0 0 0
......................................................................................TGCATGGAGGATATGTTCTTTG................................................... 22 1 1 1.00 1 0 0 1 0 0
.......................................................................................GCATGCAGGATATGTTCTTTGTTT................................................ 24 0 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGATATGTTCATTG................................................... 22 1 1 1.00 1 0 1 0 0 0
...................................................................................ACGTGCATGCAGGATATGTTCTTTG................................................... 25 3 1 1.00 1 1 0 0 0 0
.......................................................................................GCATGCAGGATATGTTCTCTTT.................................................. 22 2 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCCGGCTATGTTCTTTG................................................... 22 2 1 1.00 1 0 1 0 0 0
..................................................AAGGACATATCCTGCATAC.......................................................................................... 19 0 1 1.00 1 1 0 0 0 0
..................................................AAGGACATATCCCGCATACGG........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
.................................................................................CGTACTGCATGCAGGATATGTTCTTTG................................................... 27 2 1 1.00 1 1 0 0 0 0
........................................................................................CATGCAGGATATGTTCTTTA................................................... 20 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGATATGTTCTTTGGC................................................. 24 2 1 1.00 1 1 0 0 0 0
.................................................AAAGGACATATGCTGCATACGG........................................................................................ 22 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGCATATGTTCTTTG................................................... 22 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAAGATATGTTCTTTGT.................................................. 23 1 1 1.00 1 0 1 0 0 0
.......................................................................................GCATGCAGGATATGTTCTTG.................................................... 20 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGATATGTTTCTTG................................................... 22 2 1 1.00 1 1 0 0 0 0
.....................................................................................CTGCATGCAGGATATGTCTTTG.................................................... 22 3 1 1.00 1 1 0 0 0 0
.......................................................................................CCATGCAGGATATGTTCTTTGT.................................................. 22 1 1 1.00 1 1 0 0 0 0
..................................................AAGGACATATCCTGCGTACGG........................................................................................ 21 1 1 1.00 1 1 0 0 0 0
....................................................................................CATGCATGCAGGATATGTTCTTTG................................................... 24 2 1 1.00 1 1 0 0 0 0
.......................................................................................GCATGCAGGAGATGTTCTTTG................................................... 21 1 1 1.00 1 1 0 0 0 0
.................................................AAAGGACATATTCTGCATACG......................................................................................... 21 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGAAATGTTCTTT.................................................... 21 1 1 1.00 1 1 0 0 0 0
......................................................................................TGCATGCAGGATATGTTT....................................................... 18 1 1 1.00 1 0 1 0 0 0
......................................................................................TGCATGCAGAATATTTTCTTTG................................................... 22 2 2 0.50 1 0 1 0 0 0
..........................................................CTCCTGCATCCGGTCGGCTT................................................................................. 20 3 7 0.14 1 1 0 0 0 0
.......................................................................................GCATGCAGGATATGTCTTTG.................................................... 20 3 13 0.08 1 1 0 0 0 0
.........................................................................................................................TTTTCCAGCCTTAAGGCATT.................. 20 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TACTCTTGGTTAGAAATAAACTATAGTATAACTATTGAATTAACTTTAGTTTCCTGTATAGGACGTATGCCAACCGAAACTTTATGACGTACGTCCTATACAAGAAACAAAAATTAAACTAAAAAGGTAGTAATTACGTAATTAAAATTAAAAACTCGA

************************************....((((((((.(((((((((((((((((((.((((............)))).))))))))))))))))))).))))))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total V118

embryo

 M045

female body

 M020

head
.....................................................................................................AAGAAACAAAAATGAAACTA...................................... 20 1 2 0.50 1 1 0 0
.................................................GTTTCTGTATAGGACGTACG.......................................................................................... 20 3 13 0.08 1 0 1 0
TACTCCTGGTTAGGACTAA............................................................................................................................................ 19 3 17 0.06 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004521:11550478-11550636 + dwi_51 confident ATGAGAACCAATCTTTATTTGATATCATATTGATAACTTAATTGAAATCAAAGGACATATCCTGCATACGGTTGGCTTTGAAATACTGCATGCAGGATATGTTCTTTGTTTTTAATTTGATTTTTCCATCATTAATGCATTAATTTTAATTTTTGAGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
ATGAGAACCAATCTTTATTTGATATCATATTGATAACTTAATTGAAATCAAAGGACATATCCTGCATACGGTTGGCTTTGAAATACTGCATGCAGGATATGTTCTTTGTTTTTAATTTGATTTTTCCATCATTAATGCATTAATTTTAATTTTTGAGCTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
......................................................................................TGCATGCAGGATATGTTCTTTG...................................................22114139.001413956123693401221252
.......................................................................................GCATGCAGGATATGTTCTTTG...................................................211780.007800770109
.......................................................................................GCATGCAGGATATGTTCTTTGT..................................................221253.00253022016215
..................................................AAGGACATATCCTGCATACGGT.......................................................................................221251.00251122213312
..................................................AAGGACATATCCTGCATACGG........................................................................................211172.0017214158000
........................................................................................CATGCAGGATATGTTCTTTGTT.................................................221119.001192092106
.......................................................................................GCATGCAGGATATGTTCTTTGTT.................................................231117.001173114000
.................................................AAAGGACATATCCTGCATACGG........................................................................................22174.0074173000
......................................................................................TGCATGCAGGATATGTTCTTT....................................................21169.0069061008
......................................................................................TGCATGCAGGATATGTTCTTTGT..................................................23147.0047043202
......................................................................................TGCATGCAGGATATGTTCTT.....................................................20135.0035035000
........................................................................................CATGCAGGATATGTTCTTTG...................................................20132.0032032000
.....................................................................................CTGCATGCAGGATATGTTCTTTG...................................................23129.0029028001
...................................................AGGACATATCCTGCATACGGT.......................................................................................21124.0024024000
..........................................................................................TGCAGGATATGTTCTTTG...................................................18121.0021019101
................................................CAAAGGACATATCCTGCATACG.........................................................................................22119.0019019000
...................................................AGGACATATCCTGCATACGG........................................................................................20118.0018018000
........................................................................................CATGCAGGATATGTTCTTTGT..................................................21117.0017016100
......................................................................................TGCATGCAGGATATGTTCTTTGG..................................................23116.0016016000
.........................................................................................ATGCAGGATATGTTCTTTG...................................................19116.0016016000
......................................................................................TGCATGCAGGATATGTTCTTTGA..................................................23116.0016510100
......................................................................................TGCATGCAGGATATGTTCT......................................................19114.0014014000
.........................................................................................ATGCAGGATATGTTCTTTGTT.................................................21111.0011011000
......................................................................................TGCATGCAGGATATGTTCTTTT...................................................22110.001008002
..................................................AAGGACATATCCTGCATACG.........................................................................................2019.00909000
......................................................................................TGCATGCAGGATATGTTCTTG....................................................2118.00805111
.....................................................................................CTGCATGCAGGATATGTTCTTT....................................................2218.00808000
......................................................................................TGCATGCAGGATATGTTCTTTA...................................................2217.00704003
..................................................AAGGACATATCCTGCATACGGTT......................................................................................2314.00413000
......................................................................................TGCATGCAGGATATGTTC.......................................................1814.00404000
.......................................................................................GCATGCAGGATATGTTCTTTGTA.................................................2314.00404000
.................................................AAAGGACATATCCTGCATACG.........................................................................................2114.00404000
.......................................................................................GCATGCAGGATATGTTCTTT....................................................2013.00303000
..................................................AAGGACATATCCTGCATACGGG.......................................................................................2213.00321000
......................................................................................TGCATGCAGGATATGTTCTTTC...................................................2213.00302001
......................................................................................TGCATGCAGGATATGTTCTTTGC..................................................2313.00303000
.......................................................................................GCATGCAGGATATGTTCTT.....................................................1912.00202000
................................................CAAAGGACATATCCTGCATAC..........................................................................................2112.00211000
......................................................................................TGCATGCAGGATATGTTCTTTGTA.................................................2412.00220000
....................................................GGACATATCCTGCATACGGT.......................................................................................2012.00202000
....................................................GGACATATCCTGCATACGG........................................................................................1912.00202000
..................................................AAGGACATATCCTGCATACGGA.......................................................................................2211.00101000
......................................................................................TGCATGCAGGATATGTTCTTTTC..................................................2311.00101000
..................................................AAGGACATATCCTGCATACGGC.......................................................................................2211.00101000
...................................................AGGACATATCCTGCATACGGC.......................................................................................2111.00101000
..................................................AAGGACATATCCTGCATACGGTA......................................................................................2311.00101000
.................................................AAAGGACATATCCTGCATACGGC.......................................................................................2311.00101000
..................................................................................ATACTGCATGCAGGATATGTTCTTTG...................................................2611.00101000
.........................................................................................ATGCAGGATATGTTCTTTGT..................................................2011.00100100
..........................................................................................TGCAGGATATGTTCTTTGTT.................................................2011.00101000
.......................................................................................GCATGCAGGATATGTTCT......................................................1811.00101000
......................................................................................TGCATGCAGGATATGTTCTC.....................................................2011.00101000
...................................................AGGACATATCCTGCATACG.........................................................................................1911.00101000
..................................................AAGGACATATCCTGCATA...........................................................................................1811.00110000
...................................................AGGACATATCCTGCATACGGTTT.....................................................................................2311.00101000
.......................................................................................GCATGCAGGATATGTTCTTTGG..................................................2211.00101000
.....................................................................................CTGCATGCAGGATATGTT........................................................1811.00101000
.....................................................................................CTGCATGCAGGATATGTTCTT.....................................................2111.00101000
................................................CAAAGGACATATCCTGCATACGG........................................................................................2311.00101000
.......................................................................................GCATGCAGGATATGTTCTTTGTTT................................................2411.00101000
..................................................AAGGACATATCCTGCATAC..........................................................................................1911.00101000
........................................................................................CATGCAGGATATGTTCTTTA...................................................2011.00101000
......................................................................................TGCATGCAGGATATGTTCTTTGGC.................................................2411.00101000
.......................................................................................GCATGCAGGATATGTTCTTG....................................................2011.00101000
......................................................................................TGCATGCAGGATATGTTT.......................................................1811.00100001

Generated: 10/20/2015 at 06:51 PM