ID:

dwi_498

 Coordinate:

scf2_1100000004511:1922439-1922589 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dwil\GK17167-cds]; exon [dwil_GLEANR_17489:2]; intron [Dwil\GK17167-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAGGCAAAGACAGACGACCGGACTGACTGACTGGCGGACAGACAAAACGAGAATATATATATTTTTTGGTCATTTATCATTCAGGACAAGAAAGCAGCAACAACAGCAATAACAACAACTGAACCAGTTGGTTGTTGGTGCAAAGGAAGCAGCAACAATTACCAGGAATATAAGTGACAATTTTCCTATATATTTTCATAGCGCGATATCAAGCAGCAGCAGCAGCAACAGCAACAGCAGAAACAGCAGCG
**************************************************(((.(((((((.......(((((((((.((((.((........((.((.......(((.((((((((((((...)))))).)))))).))).......)).))........))..)))))))))))))........))))))).)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
 V119
head
 M020
head
 V118
embryo
...............................................................................................................................TTGCTTGTTGGTGTAAAGG......................................................................................................... 19 2 7 0.14 1 1 0 0 0 0
....................................................................................................................................................GCAGCAACGCTTACTAGGA.................................................................................... 19 3 11 0.09 1 0 1 0 0 0
........................................................................................................................................................................................................................CAGCAGCAGCAACAGCAACAGC............. 22 0 20 0.05 1 0 0 1 0 0
...................................................ATTATATATATTTTTTGGGC.................................................................................................................................................................................... 20 2 20 0.05 1 0 0 0 1 0
...........................................................................................................................................................................................................................CAGCAGCAACAGCAACAGCA............ 20 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................................................................AGCACTAACAGCAACAGCAGA.......... 21 2 20 0.05 1 0 0 1 0 0
..........................................................................................................................................................................................................................GCAGCAGCAACAGCAACAGC............. 20 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................................................ACAGCAGAAACAGCAACG 18 1 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

GTCCGTTTCTGTCTGCTGGCCTGACTGACTGACCGCCTGTCTGTTTTGCTCTTATATATATAAAAAACCAGTAAATAGTAAGTCCTGTTCTTTCGTCGTTGTTGTCGTTATTGTTGTTGACTTGGTCAACCAACAACCACGTTTCCTTCGTCGTTGTTAATGGTCCTTATATTCACTGTTAAAAGGATATATAAAAGTATCGCGCTATAGTTCGTCGTCGTCGTCGTTGTCGTTGTCGTCTTTGTCGTCGC
**************************************************(((.(((((((.......(((((((((.((((.((........((.((.......(((.((((((((((((...)))))).)))))).))).......)).))........))..)))))))))))))........))))))).)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
........................................................................................................................................CCACATTTCATTCGTCGTTG............................................................................................... 20 2 1 1.00 1 1
....................................................................................................................................................................................................................................GTCGTTGTCGTTTCTGTCGTCGC 23 2 6 0.17 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004511:1922389-1922639 + dwi_498 CAGGC-AAAGACAGACGACCGGACT-GACTG--------------------AC-TGGCG--GA----CAGACA--AA---------------------------------------AC-------GAGAATATATA------------TATTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCATTTATCATTCAGGACAAGAAAG-------------------------------------------------------------------------------------------------------CAGCAACAACAGCAATAAC--------------------------------------------AACAACTGAACCAGTTGGTTGTT-----------------------------------------------------------------------------------------------------------------------GGTGCAAAGGAAGCAGCAACAATT--ACCAGGAA---------------TATAAGTGACAA---TTTTCCTATATATTTTCATAG-------C-------------------------------------------------GC-GATATCAAGCAGCAGCAGCAGCAACAGC---AACAGCAGAAACAGCAGCG
droVir3 scaffold_12970:3141770-3142006 + AGAGC-GAA--AGAGTGAGAGA------------------------------G-AGAGA--GA----GAGAGA--GG---------------------------------------GA-------AGGAGAACGCA------------TATT----GCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAAAGGATAAAGCGAGAAGAGAAACTAACAACGACGACGC-ATAAACAAAACTGAAACTGAAAATATTTGCCCAAAGAA---------------------------------------------------------------------------T---------------AACACAAATACAGCC----------------------------------------------------------------------------------------------------------------ATACACATATATTTCAGAAAGTGAACAGCA--------------------------------------------------------------------------------------------------A---------------------------AAGC----A------------ACA-A-AAAACAGCAGCAGCAGCAGCAGCAGC---AGCGGCAGCAGCGGCAGCG
droMoj3 scaffold_6680:8185871-8186093 + CAGAC-AGA--CAGACAGACAGACA-GACGG--------------------AC-AGACG--GACAAACAGGCA--AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAAAGATTTGCACACAGATCAAAGTGCGGGCAAAC-----------------------------------------GCAG--------------------------------CA------------------------GAGCCAGAAGAGCAGA-----------------------------------------------------------------------------------------------------------------------AAGGCAAACGGAGCA---T---TT----------AAGTTATGCGGTTGC----------------------------------------------------ACATGCAACAAAAATGAGGAAGCAAACTGCAAAA--------TGCAACTGCAACGGCAGCGGCAGCGACAGC---AGCAGAAGCAGCAGCAGAG
droGri2 scaffold_15110:14280087-14280304 - GAGGT-GGAGGCGG--AGGCGGACA-GGCAGGCAGTTAGTGTAAATGTTATGCATGGCATCAAGCGACAGACACAAA---------------------------------------AC-------GAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTGCTGGTCATTTATCATGGCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA--AC---A------------------------------GCAGCAGCAACCAACAACAGCAACAACAATAAC-----------------GATGGCCAGCGACAAGGAAGCAGCAACAATTTGGTCAGGAA---------------TTTAAGTGACAA---TTTTCATAC-AATTTTCAAGG-------C------------------------------------------------------------------------------------------------------
dp5 XR_group6:10228528-10228691 + GCTGA-GGA--------------------AGGCGGTTGG-------------------------------------------------------------------------------------------TGCT--------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCATTTATCATTTCGGACAACA-GG-------------------------------------------------------------------------------------------------------CGGCGGCAACAACAACAAC-----------------------------------------------------------------------------------------------------------------------------------AAC------------------------------------------------------------------------AATT--ACCACGAA---------------TATAAGTGACAA---TTTTCATA--CATTTCCATGG-------GCCA---------------------------------------------------CACGGCGTATGAGCGATGACGACAAT---TTTGGCGAGCTCTAGAAGA
droPer2 scaffold_1246:974-1156 + GGCAG-AGA--------------------TGAC--------------------------------------------------------------------------------------------GATGATACACC------------AATTGTAT----------CGTC------------------------ATACTATGATGATA-------------------AACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGCG------------GCA---------GCACAA-------GCAGCAGCAACAACAACAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAGCAGCAGCAACAAAAACACCAGCACAAGCAGCAGTG
droAna3 scaffold_13117:4605212-4605378 + TGTTT-CTT------------------GTGT-C--------------------------------------------------------------------------------------------TTT------------TATTTTCC-----------AGTTTATTGGC-------------------------------------------------------------------------AACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATGGTCAGCAC--------------AAC---ATTGACAAC---------ACTGG-------------------CTGCTGGACAAACAA-----CTAGTAG--------CAG------TAA------------------------------------------------------------------------T------------------------CATC-------------------------------------------------------------ATCATCA-------------------------------------------TCATCATCACAATCACAATCAGCAGCAGCAGCAGCAGC---AACAGCAGCAGCAGCAGTT
droBip1 scf7180000396535:146331-146507 - GACCC-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAGCAACAACAACAG-----------------------C---------AGCAG-------------------CTGCTGGCCATGCAGGTTGCCCAGCAACA--GC---AGCAGCG------------GCA---------GCAGCA-------GCAGCAGCAGCATCTCCAGC-----------------AAC--------------------------------------------------------------------------------------------------CGCCCGCCTATCCG--------------------GGCATGA--------TGGG---CATGCACCAGCAGCAGCAGCAGC---AACAACAGAACCAGCAGCA
droKik1 scf7180000302255:200534-200686 - GCAGC-A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAACAA-----------------------------C---------------AACAGCC-------------ACGGCAGCAACCA-----CTTGGAG--------CAG------CAA------------------------------------------------------------------------ACG-----------------ACAGAAATG--ATCTTAAA---------------TGAATGCGGAAG---TTTTTCT-TGGGGTTTCGTAA-------C-------------------------------------------------CA---GCTACAGCAGCAGCAGCAGCCACTGC---ATCAGCAGCAGCAGCAGCA
droFic1 scf7180000454072:698292-698467 + GTCAT-TCA--------------------------------------------------------------------------------------------------------------------------------------------------TCAT--------------------------------------------------------------------CACCACCAGCAGCAGCAACA------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCACCAGCATCAGCAGT-----AGCAGCAGCAGC---AGCATCAGC---------------AG-------------------------------------------CATC--A---------------------------------GCAGTA-------GCAGCAGCAGCATCAGCAACTCCA------------------------------------------AC-------------------------------------------------------------ATCAACA-------------------------------------------GCAGCAACAGCAGCATCAACAGCAGCAACAGCAGCATC---AACAGCAGCAACATCAACA
droEle1 scf7180000491028:2435917-2436082 - CAACG-CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAGCAAAAGC--------------------------------------------------------------------------------------------------AGC---AACAAGAGCAACATCAGCAGCAGCAGCAGCA---------------------------------------------------------------------CCAACT---------------ATGCCATTACTGCTGGCAACAACACTGTCCAAC--AATTCCCATCA-------T---------------------------CAAC----G------------CTT-G-AGCTCAACAGCAGCAGCAGCAGCAGC---AACAGCAACAACAGCAACA
droRho1 scf7180000777041:7417-7603 - CACGC-AGT------------------GTTGCC--------------------------------------------------------------------------------------------A-A------------TACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAATTGCTGGCAATCGTTCTCTATTGCTGTTGTCTGGTGCATGGACAACAGCAACAACAGCAGCAACAACAG-----------------------C---------AGCAGCAA----------------------------------------CAGC-----AGCAGC---AACAACAGCAGCAGCAACAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---ACAGCAGCAACAGCAGCAGCAACAAC---AGCAGCAACAACAGCAGCA
droBia1 scf7180000302075:432003-432227 + CAAAG-CAA--CAGACGACCGCAACAAGTGG--------------------------GG--GA-----------------------------------------------------------------------------CAGCTGCC-----------AGGTGACA-GCAAC------------AATATTGTGAAG-TAT--CCCTAAAGCG--CTCAA--------------AGCAACAGTGACA------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAACAGCAGCAAC-----AGCAATAGCAGC---AGC---------------ATCAGCAG-------------------------------------------CAGC--AGCAAC---AACAACAGCAACAGCAATAGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGC---AGCAGCAGCAACAGCAGCA
droTak1 scf7180000415862:231878-232136 - CACAG-CGCGGCGGAAGACAGCGGC---------------------------------------------------------------------------------------------------------------------------AATT----TCAA-------------------------------------------------------------------AACCAAC------AGCCACAGCAACAGCAGCAACATCAAGCAATCAACAGCAACTCGGCAATCAGCGGAATCAACAGCAGCAATAGAATCGTAGATAGCAGCAACTACAATAAAATGACCAAAAATAGCTTTAGAGGTAGCATGAGATTTACCACACCAAGTACCAATCCTCAATCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA-------------------------------------------------------------------------------------------------------------------------------C-----------TCAT------C-ATCACAGCAGCAGCAGCAGCAACAGC---AACAGCAGCAACATCAGAA
droEug1 scf7180000409466:5285443-5285677 - CGGGC-GGA--CCGACAAGCGGGCT-GGCAG--------------------AC-TGGCG--GACTGACGGACG--GA-------------------CAGACATTTGCTTCCTGGAAACCGGGACAG----------AAGA-------------------------CA-GCGACTGGGCTGCTGTGGTTGTTGTTATT-TAT--GGCTCATTCGCGCTCAGGTTGCAGCACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC---A-----------------------------------------AACAGAAAAA-------------------------------------------CTGG--TTAAAA---AATAAATAAAGAAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACA--------A------GTCGCAGCAGCAGCAGCAACAGC---AACAGCGGCAGCAGCAGC-
dm3 chr2R:13261599-13261761 + AGCAA-C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACA------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGCCGCAGCAGCAGCAAC---AG--------------------------------------------TT---C--------------------AGCTATCACAGCAACA--GC---A------------------------------GCAATA-------ACAACTACTACCACAGCAATGCCAGCAAGCAGGCAGCACACG-----------------CC---------------------------------------------------------------------------------------------------------------AGCAACA--------TGTATCAACAGCAGCAGCAGCAGCATCAGC---AACAGCAGCAACATCAGCA
droSim2 x:4629813-4629998 - TCAGC-TGA-------------------------------------------------------------------------------------------------------------------------------------------TATT----GCAG-------------------------------------------------------------------ACACAAC------AGCAACA------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCCGGCAGCGGCAGCAG-CTGAGCAGCAATTGGCC---------TTGGCCTTGGAG---------------------------------------------------------------------------C---------------AGCAGAGGCAGCAGCAGGAACAG-------------------------------------------CAGG--CGCAGC---AACAAAGGCAGCAGCAGCAGCAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---GCAAAGGCAGCAGCAGCAGCAACAAC---AGCAGCAGCAGCAGGCGCA
droSec2 scaffold_8:195238-195435 + ACAAT-TTT--------------------------------------------------------------------------------------------------------------------------------------------------TGGGC-------------------------------------------------------------------ATCCAAC------TGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG---------------------------------------------------------------------------AA-------------------------------AGGCGACAGCAGCAGCAGCAACAAC---AA--CACTTGCCACAACGCCAACAAT---------CAAAG-------------------ACATTGGAGA---CA-----CACAGGG--------CAG------CAAAGTCGACGGCAGCAGCAGCAGCAGCG---------------------------------------------GC------------------------AATT-------------------------------------------------------------GTTGCTG-------------------------------------------TTGTCGTTT-G---AACTGCAGCAGCAGCAACAGCAAC---AGCAACAGCAATAGCAGCA
droYak3 2L:2082158-2082400 - CAGGACCAA--CAG--GACCAAAAG-GACCC--------------------AC-GGGCG--GC----GAAACA--AATTTGCAATATAAATTTATGCGGATTTTTGCGTCGCAG----CGGCGCCG----------ACGA-------------------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACGTCATCGAATCGCGTAGCC-CAGGCC---------ATGCTGCTGATG---------------------------------------------------------------------------T---------------CGACGTCGCAGCAGCAGCAGCAG-------------------------------------------CAGT--GGCAGC---AACATCAGTGGCAGCAACAGCAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA---GCAGCAGCAACAGCAGCAGCAACAAC---AGCAGCAGCAACAGCAGCA
droEre2 scaffold_4690:1035223-1035364 + TTGTC-GGC--CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT------T-----------------------------------------------------------------------------------------------------------------------------------------------------------CATCAT-CG---------------------------------------------------------------------------AC-------------------------------A---------------AGCAGCAAG-----AGCAGCAGCAGC---AGCAACAAC---------------AC-------------------------------------------CACC--AGCAGC---AGCAACAGCAGCAGCAACAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAACAGCAGCAGCAGCAACAACAGC---AGCAACAGCAGCAGCAGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CAGGC-AAAGACAGACGACCGGACT-GACTG--------------------AC-TGGCG--GA----CAGACA--AA---------------------------------------AC-------GAGAATATATA------------TATTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCATTTATCATTCAGGACAAGAAAG-------------------------------------------------------------------------------------------------------CAGCAACAACAGCAATAAC--------------------------------------------AACAACTGAACCAGTTGGTTGTT-----------------------------------------------------------------------------------------------------------------------GGTGCAAAGGAAGCAGCAACAATT--ACCAGGAA---------------TATAAGTGACAA---TTTTCCTATATATTTTCATAG-------C-------------------------------------------------GC-GATATCAAGCAGCAGCAGCAGCAACAGC---AACAGCAGAAACAGCAGCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAGC---AACAGC.............22200.05100001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGC---AACAGCA............20200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGC---AACAGC.............20200.05100100
droVir3
AGAGC-GAA--AGAGTGAGAGA------------------------------G-AGAGA--GA----GAGAGA--GG---------------------------------------GA-------AGGAGAACGCA------------TATT----GCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAAAGGATAAAGCGAGAAGAGAAACTAACAACGACGACGC-ATAAACAAAACTGAAACTGAAAATATTTGCCCAAAGAA---------------------------------------------------------------------------T---------------AACACAAATACAGCC----------------------------------------------------------------------------------------------------------------ATACACATATATTTCAGAAAGTGAACAGCA--------------------------------------------------------------------------------------------------A---------------------------AAGC----A------------ACA-A-AAAACAGCAGCAGCAGCAGCAGCAGC---AGCGGCAGCAGCGGCAGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC---AGCGGCAGCAG........20200.102000000000000000000000000000002000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGCAGCAGCAGCAGCAGC.........................22200.102000000000000000000000000000000000000000000000000000000000000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGC---AGCGGCAGCA.........24200.102002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAGCAGCAGCAGCAGCAGC.........................23150.071000000000000000000000000000000000000000000000000000000000001000
.......AA--AGAGTGAGAGA------------------------------G-AGAGA--GA----.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.061000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAAACAGCAGCAGCAGCAG.............................20170.061000000000000000000000000000000000000010000000000000000000000000
......GAA--AGAGTGAGAGA------------------------------G-AGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19180.061000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGC---AGCGGC.............24200.051000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAGCA...........................19200.051000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAGCAGCAGCAGCAG.............................19200.051001000000000000000000000000000000000000000000000000000000000000
.................AGAGA------------------------------G-AGAGA--GA----GAGAGA--GG---------------------------------------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAGC---AGCGGCAGCAGC.......32200.051000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGC---AGCGGCAGCAGC.......23200.051000000000000000000000000000000000000000000000000000000000000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGC---AGCGGCAGCAG........21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
CAGAC-AGA--CAGACAGACAGACA-GACGG--------------------AC-AGACG--GACAAACAGGCA--AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAAAGATTTGCACACAGATCAAAGTGCGGGCAAAC-----------------------------------------GCAG--------------------------------CA------------------------GAGCCAGAAGAGCAGA-----------------------------------------------------------------------------------------------------------------------AAGGCAAACGGAGCA---T---TT----------AAGTTATGCGGTTGC----------------------------------------------------ACATGCAACAAAAATGAGGAAGCAAACTGCAAAA--------TGCAACTGCAACGGCAGCGGCAGCGACAGC---AGCAGAAGCAGCAGCAGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.AGAC-AGA--CAGACAGACAGACA-GAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AGCAGAAGCAGCAGCAGA.20200.051100000
....C-AGA--CAGACAGACAGACA-GA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droGri2
GAGGT-GGAGGCGG--AGGCGGACA-GGCAGGCAGTTAGTGTAAATGTTATGCATGGCATCAAGCGACAGACACAAA---------------------------------------AC-------GAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTGCTGGTCATTTATCATGGCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA--AC---A------------------------------GCAGCAGCAACCAACAACAGCAACAACAATAAC-----------------GATGGCCAGCGACAAGGAAGCAGCAACAATTTGGTCAGGAA---------------TTTAAGTGACAA---TTTTCATAC-AATTTTCAAGG-------C------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
GCTGA-GGA--------------------AGGCGGTTGG-------------------------------------------------------------------------------------------TGCT--------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCATTTATCATTTCGGACAACA-GG-------------------------------------------------------------------------------------------------------CGGCGGCAACAACAACAAC-----------------------------------------------------------------------------------------------------------------------------------AAC------------------------------------------------------------------------AATT--ACCACGAA---------------TATAAGTGACAA---TTTTCATA--CATTTCCATGG-------GCCA---------------------------------------------------CACGGCGTATGAGCGATGACGACAAT---TTTGGCGAGCTCTAGAAGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTTCGGACAACA-GG-------------------------------------------------------------------------------------------------------CGGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000200
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGACAACA-GG-------------------------------------------------------------------------------------------------------CGGCGGCA........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000100
droPer2
GGCAG-AGA--------------------TGAC--------------------------------------------------------------------------------------------GATGATACACC------------AATTGTAT----------CGTC------------------------ATACTATGATGATA-------------------AACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGCG------------GCA---------GCACAA-------GCAGCAGCAACAACAACAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAGCAGCAGCAACAAAAACACCAGCACAAGCAGCAGTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAGC..................................2361.67100100000
....................................................................................................................................................................................................................................ACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2251.608080000
....................................................................................................................................................................................................................................ACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................2151.407070000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCA....................................2161.338070001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAG...................................2261.177070000
..............................GAC--------------------------------------------------------------------------------------------GATGATACACC------------AATTGTAT----------CG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2441.004040000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGC.....................................2061.006060000
....................................................................................................................................................................................................................................ACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................2350.804040000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAGCAG................................2550.804040000
..................................................................................................................................TACACC------------AATTGTAT----------CGTC------------------------ATACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.804400000
....................................................................................................................................................................................................................................ACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................2450.804130000
...AG-AGA--------------------TGAC--------------------------------------------------------------------------------------------GATGATACACC------------AATTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.753111000
....................................................................................................................................................................................................................................ACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................2550.603030000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAGCA.................................2460.503030000
.......................................................................................................................................C------------AATTGTAT----------CGTC------------------------ATACTAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.402200000
....................................................................................................................................................................................................................................ACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................2050.402020000
.....................................................................................................................................ACC------------AATTGTAT----------CGTC------------------------ATACTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.402200000
....................................................................................................................................................................................................................................ACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAA....................................................................................................................................................................................................................................................................................................................................................................................................2350.402020000
....................................................................................................................................CACC------------AATTGTAT----------CGTC------------------------ATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.402200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGCG------------GC......................................................................................................................................................................................................................................................................2760.332020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGC.....................................1960.332020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGCG------------GCA---------............................................................................................................................................................................................................................................................2860.332020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGC.....................................................................................................................................................................................................................................................................................2460.332011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGCG------------GC......................................................................................................................................................................................................................................................................2460.332011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------CG--GC---AGCAGCG------------GCA---------GCACAA-------GCA............................................................................................................................................................................................................................................2570.292020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---C--------------------TACTA---------CG--GC---AGCAGCG------------GCA---------CA..........................................................................................................................................................................................................................................................2370.292020000
.............................TGAC--------------------------------------------------------------------------------------------GATGATACACC------------AATTGTAT----------CGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.251010000
..............................GAC--------------------------------------------------------------------------------------------GATGATACACC------------AATTGTAT----------CGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.251010000
..............................GAC--------------------------------------------------------------------------------------------GATGATACACC------------AATTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251010000
..............................GAC--------------------------------------------------------------------------------------------GATGATACACC------------AATTGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.251010000
....................................................................................................................................................................................................................................ACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAGCAA.................................................................................................................................................................................................................................................................................................................................................................................................2650.201010000
.....................................................................................................................................ACC------------AATTGTAT----------CGTC------------------------ATACTATGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.201010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAGCAG................................2050.201010000
.....................................................................................................................................................................................................................................CCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................2050.201010000
.....................................................................................................................................................................................................................................CCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAA....................................................................................................................................................................................................................................................................................................................................................................................................2250.201010000
......................................................................................................................................CC------------AATTGTAT----------CGTC------------------------ATACTAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAGCAGCAGCAAC.........................2650.201010000
.....................................................................................................................................................................................................................................CCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................1950.201001000
.....................................................................................................................................................................................................................................CCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2150.201010000
.....................................................................................................................................................................................................................................CCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................2550.201010000
.....................................................................................................................................ACC------------AATTGTAT----------CGTC------------------------ATACTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201010000
....................................................................................................................................................................................................................................ACCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................2650.201010000
...................................................................................................................................ACACC------------AATTGTAT----------CGTC------------------------ATACTATGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.201010000
.....................................................................................................................................................................................................................................CCGTC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................2350.201010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAG.........................................2160.171001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAG......................................................................................................................................................................................................................................................................................2660.171010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAA......................................1960.171010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGC........................................2360.171010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGCG------------G.......................................................................................................................................................................................................................................................................2660.171001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---...........................................................................................................................................................................................................................................................................................2060.171010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCA.......................................................................................................................................................................................................................................................................................2860.171010000
........................................................................................................................................................................................................................................TC------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------CAGCAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................2160.171010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAG......................................................................................................................................................................................................................................................................................2760.171010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAACACCAGCACAAGCAGC....2260.171010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAGC..................................2660.171100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGCG------------........................................................................................................................................................................................................................................................................2560.171010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGC........................................2160.171010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAG......................................1960.171010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---A..........................................................................................................................................................................................................................................................................................2560.171010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAAC---AG--------------------------------------------CT---C--------------------TACT..............................................................................................................................................................................................................................................................................................................1960.171010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---A..........................................................................................................................................................................................................................................................................................2060.171010000
.........................................................................................................................................................................C------------------------ATACTATGATGATA-------------------AACCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.171010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGCG------------GC......................................................................................................................................................................................................................................................................2560.171010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAC...................................2260.171010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AG.........................................................................................................................................................................................................................................................................................2660.171010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---...........................................................................................................................................................................................................................................................................................2460.171010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAG......................................................................................................................................................................................................................................................................................2360.171010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---C--------------------TACTA---------CG--GC---AGCAGCG------------GCA---------............................................................................................................................................................................................................................................................2170.141010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTA---------CG--GC---AGCAGCG------------GCA---------G...........................................................................................................................................................................................................................................................2070.141010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------GTC------------------------------------------------------------------------------------------------------------------------------------------A--------A---ACCGCAGCAGCAGCAC................................2270.141010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------CG--GC---AGCAGCG------------GCA---------GCACAA-------GCAG...........................................................................................................................................................................................................................................2670.141010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGCG------------G.......................................................................................................................................................................................................................................................................2270.141010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTA---------CG--GC---AGCAGCG------------GCA---------GCACA.......................................................................................................................................................................................................................................................2370.141010000
.......................................................................................................................................................TGTAT----------CGTC------------------------ATACTATGATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.141010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--------------------------------------------CT---C--------------------TACTA---------CG--GC---AGCAGC.....................................................................................................................................................................................................................................................................................2070.141001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTA---------CG--GC---AGCAGCG------------GCA---------GC..........................................................................................................................................................................................................................................................2170.141010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---C--------------------TACTA---------CG--GC---AGCAGCG------------GCA---------GCAC........................................................................................................................................................................................................................................................2670.141010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---C--------------------TACTA---------CG--GC---AGCAGCG------------GC......................................................................................................................................................................................................................................................................2070.141010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---C--------------------TACTA---------CG--GC---AGCAGCG------------GCA---------C...........................................................................................................................................................................................................................................................2270.141010000
droAna3
TGTTT-CTT------------------GTGT-C--------------------------------------------------------------------------------------------TTT------------TATTTTCC-----------AGTTTATTGGC-------------------------------------------------------------------------AACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATGGTCAGCAC--------------AAC---ATTGACAAC---------ACTGG-------------------CTGCTGGACAAACAA-----CTAGTAG--------CAG------TAA------------------------------------------------------------------------T------------------------CATC-------------------------------------------------------------ATCATCA-------------------------------------------TCATCATCACAATCACAATCAGCAGCAGCAGCAGCAGC---AACAGCAGCAGCAGCAGTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---AACAGCAGCAGCAGC....20200.255050000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------------------------------------------------------------ATCATCA-------------------------------------------TCATCATC....................................................18200.153000003
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------------------------------------------------------------ATCATCA-------------------------------------------TCATCATCAC..................................................2090.111000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGC---AAC................21200.102020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AACAGCAGCAGCAGCAGT.19190.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------T------------------------CATC-------------------------------------------------------------ATCATCA-------------------------------------------TCATCAT.....................................................20200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGCAGCAGCAG.......................20200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGC---AACAGC.............21200.051000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGC---AACAGCA............22200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGC---AACAGCA............25200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AACAGCAGCAGCAGC....18200.051001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC---AACAGCAGCAGC.......20200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGC---AACAGCA............23200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGC---AACAG..............22200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGC---AACA...............21200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGC---AACAGCAGC..........20200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------T------------------------CATC-------------------------------------------------------------ATCATCA-------------------------------------------TCATCATCA...................................................22200.051000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGC---AACAGCAGCAGCA......25200.051010000
droBip1
GACCC-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAGCAACAACAACAG-----------------------C---------AGCAG-------------------CTGCTGGCCATGCAGGTTGCCCAGCAACA--GC---AGCAGCG------------GCA---------GCAGCA-------GCAGCAGCAGCATCTCCAGC-----------------AAC--------------------------------------------------------------------------------------------------CGCCCGCCTATCCG--------------------GGCATGA--------TGGG---CATGCACCAGCAGCAGCAGCAGC---AACAACAGAACCAGCAGCASizeHit CountTotal NormTotal
No Reads
droKik1
GCAGC-A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAACAA-----------------------------C---------------AACAGCC-------------ACGGCAGCAACCA-----CTTGGAG--------CAG------CAA------------------------------------------------------------------------ACG-----------------ACAGAAATG--ATCTTAAA---------------TGAATGCGGAAG---TTTTTCT-TGGGGTTTCGTAA-------C-------------------------------------------------CA---GCTACAGCAGCAGCAGCAGCCACTGC---ATCAGCAGCAGCAGCAGCASizeHit CountTotal NormTotal
No Reads
droFic1
GTCAT-TCA--------------------------------------------------------------------------------------------------------------------------------------------------TCAT--------------------------------------------------------------------CACCACCAGCAGCAGCAACA------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCACCAGCATCAGCAGT-----AGCAGCAGCAGC---AGCATCAGC---------------AG-------------------------------------------CATC--A---------------------------------GCAGTA-------GCAGCAGCAGCATCAGCAACTCCA------------------------------------------AC-------------------------------------------------------------ATCAACA-------------------------------------------GCAGCAACAGCAGCATCAACAGCAGCAACAGCAGCATC---AACAGCAGCAACATCAACASizeHit CountTotal NormTotal
No Reads
droEle1
CAACG-CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAGCAAAAGC--------------------------------------------------------------------------------------------------AGC---AACAAGAGCAACATCAGCAGCAGCAGCAGCA---------------------------------------------------------------------CCAACT---------------ATGCCATTACTGCTGGCAACAACACTGTCCAAC--AATTCCCATCA-------T---------------------------CAAC----G------------CTT-G-AGCTCAACAGCAGCAGCAGCAGCAGC---AACAGCAACAACAGCAACASizeHit CountTotal NormTotal
No Reads
droRho1
CACGC-AGT------------------GTTGCC--------------------------------------------------------------------------------------------A-A------------TACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAATTGCTGGCAATCGTTCTCTATTGCTGTTGTCTGGTGCATGGACAACAGCAACAACAGCAGCAACAACAG-----------------------C---------AGCAGCAA----------------------------------------CAGC-----AGCAGC---AACAACAGCAGCAGCAACAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---ACAGCAGCAACAGCAGCAGCAACAAC---AGCAGCAACAACAGCAGCASizeHit CountTotal NormTotal
No Reads
droBia1
CAAAG-CAA--CAGACGACCGCAACAAGTGG--------------------------GG--GA-----------------------------------------------------------------------------CAGCTGCC-----------AGGTGACA-GCAAC------------AATATTGTGAAG-TAT--CCCTAAAGCG--CTCAA--------------AGCAACAGTGACA------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAACAGCAGCAAC-----AGCAATAGCAGC---AGC---------------ATCAGCAG-------------------------------------------CAGC--AGCAAC---AACAACAGCAACAGCAATAGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGC---AGCAGCAGCAACAGCAGCASizeHit CountTotal NormTotal
No Reads
droTak1
CACAG-CGCGGCGGAAGACAGCGGC---------------------------------------------------------------------------------------------------------------------------AATT----TCAA-------------------------------------------------------------------AACCAAC------AGCCACAGCAACAGCAGCAACATCAAGCAATCAACAGCAACTCGGCAATCAGCGGAATCAACAGCAGCAATAGAATCGTAGATAGCAGCAACTACAATAAAATGACCAAAAATAGCTTTAGAGGTAGCATGAGATTTACCACACCAAGTACCAATCCTCAATCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA-------------------------------------------------------------------------------------------------------------------------------C-----------TCAT------C-ATCACAGCAGCAGCAGCAGCAACAGC---AACAGCAGCAACATCAGAASizeHit CountTotal NormTotal
No Reads
droEug1
CGGGC-GGA--CCGACAAGCGGGCT-GGCAG--------------------AC-TGGCG--GACTGACGGACG--GA-------------------CAGACATTTGCTTCCTGGAAACCGGGACAG----------AAGA-------------------------CA-GCGACTGGGCTGCTGTGGTTGTTGTTATT-TAT--GGCTCATTCGCGCTCAGGTTGCAGCACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC---A-----------------------------------------AACAGAAAAA-------------------------------------------CTGG--TTAAAA---AATAAATAAAGAAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACA--------A------GTCGCAGCAGCAGCAGCAACAGC---AACAGCGGCAGCAGCAGC-SizeHit CountTotal NormTotal
No Reads
dm3
AGCAA-C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACA------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGCCGCAGCAGCAGCAAC---AG--------------------------------------------TT---C--------------------AGCTATCACAGCAACA--GC---A------------------------------GCAATA-------ACAACTACTACCACAGCAATGCCAGCAAGCAGGCAGCACACG-----------------CC---------------------------------------------------------------------------------------------------------------AGCAACA--------TGTATCAACAGCAGCAGCAGCAGCATCAGC---AACAGCAGCAACATCAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCACAGCAACA--GC---A------------------------------GCAATA-------ACAAC..........................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
TCAGC-TGA-------------------------------------------------------------------------------------------------------------------------------------------TATT----GCAG-------------------------------------------------------------------ACACAAC------AGCAACA------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCCGGCAGCGGCAGCAG-CTGAGCAGCAATTGGCC---------TTGGCCTTGGAG---------------------------------------------------------------------------C---------------AGCAGAGGCAGCAGCAGGAACAG-------------------------------------------CAGG--CGCAGC---AACAAAGGCAGCAGCAGCAGCAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---GCAAAGGCAGCAGCAGCAGCAACAAC---AGCAGCAGCAGCAGGCGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................CACAAC------AGCAACA------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCCGGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00201000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---GCAAAGGC........................................2511.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAGCAGGAACAG-------------------------------------------CAGG--CGCA..........................................................................................................................................................................................................................................................................................2511.00100010000000000000
.............................................................................................................................................................................................................................................................G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCCGGCAGCGGCAGCAG-CTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAGGCAGCAGCAGGA...................................................................................................................................................................................................................................................................................................................................................1820.50100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---GC..............................................1930.33100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAG---------------------------------------------------------------------------C---------------AGCAGAGGC.............................................................................................................................................................................................................................................................................................................................................................1540.25100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAGGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................16110.09100000010000000000
droSec2
ACAAT-TTT--------------------------------------------------------------------------------------------------------------------------------------------------TGGGC-------------------------------------------------------------------ATCCAAC------TGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG---------------------------------------------------------------------------AA-------------------------------AGGCGACAGCAGCAGCAGCAACAAC---AA--CACTTGCCACAACGCCAACAAT---------CAAAG-------------------ACATTGGAGA---CA-----CACAGGG--------CAG------CAAAGTCGACGGCAGCAGCAGCAGCAGCG---------------------------------------------GC------------------------AATT-------------------------------------------------------------GTTGCTG-------------------------------------------TTGTCGTTT-G---AACTGCAGCAGCAGCAACAGCAAC---AGCAACAGCAATAGCAGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAGCAAC---A..................21200.0510010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAAC---AA--C.....................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
droYak3
CAGGACCAA--CAG--GACCAAAAG-GACCC--------------------AC-GGGCG--GC----GAAACA--AATTTGCAATATAAATTTATGCGGATTTTTGCGTCGCAG----CGGCGCCG----------ACGA-------------------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGACGTCATCGAATCGCGTAGCC-CAGGCC---------ATGCTGCTGATG---------------------------------------------------------------------------T---------------CGACGTCGCAGCAGCAGCAGCAG-------------------------------------------CAGT--GGCAGC---AACATCAGTGGCAGCAACAGCAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA---GCAGCAGCAACAGCAGCAGCAACAAC---AGCAGCAGCAACAGCAGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAAC---AGCAGCAGCAACAGCAGC.29180.06100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAAC---AGCAGCAGC..........20200.05100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAAC---AGCAGCA............25200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAAC---AGCAGCAGCAACAGC....24200.05100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAAC---AGCAGC.............24200.05101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAAC---AGCAGCAGCAACAGC....27200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACA........................19200.05101000000000
droEre2
TTGTC-GGC--CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT------T-----------------------------------------------------------------------------------------------------------------------------------------------------------CATCAT-CG---------------------------------------------------------------------------AC-------------------------------A---------------AGCAGCAAG-----AGCAGCAGCAGC---AGCAACAAC---------------AC-------------------------------------------CACC--AGCAGC---AGCAACAGCAGCAGCAACAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAACAGCAGCAGCAGCAACAACAGC---AGCAACAGCAGCAGCAGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAG-----AGCAGCAGCAGC---AG.......................................................................................................................................................................................................................................................................................................................................................................2120.5010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAG-----AGCAGCAGCAGC---A........................................................................................................................................................................................................................................................................................................................................................................2140.2510000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAG-----AGCAGCAGCAGC---.........................................................................................................................................................................................................................................................................................................................................................................2050.2010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAAC...........................................2660.1710100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C.......................................................18200.1530000030
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAACAGCA.......................................22200.1020000200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAGCAGCAGCA..............................21200.1021000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA......................................................22200.1020000200
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAGCAACA...........................22200.1020000020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGC---AGCAACAGCAGCA......25110.0910000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAACAACA........................24140.0710000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAGC---AGCAACAGC..........23160.0610000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---AGCAACAGCAGCAGCA.....................................................................................................................................................................................................................................................................21200.0510001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAACA..........................................20200.0511000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCAGCAAC............................24200.0510100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGC---AGCAACAGCAGCA......20200.0510001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAAC............................19200.0510000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACA.............................................21200.0510000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAAC...........................................19200.0511000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACA..................................................................................................................................................................................................................................................................19200.0510001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGC---AGCAACAGCA.........19200.0510000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCAGC...............................21200.0511000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAACAGC---AGCA...............25200.0510001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAACAGC---AGC................23200.0510000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAACAGC---AGCA...............24200.0511000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGC.................................................20200.0510100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGC....................................................24200.0511000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAACAGCAGC.....................................24200.0511000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAGCAGC..................................20200.0510100000

Generated: 05/17/2015 at 11:13 PM