ID:

dwi_463

 Coordinate:

scf2_1100000004511:564205-564355 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dwil_GLEANR_17428:2]; CDS [Dwil\GK17101-cds]; intron [Dwil\GK17101-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACGACGAGGACGACGACGACGACGTCGAAGTTGATGATGACGATGAGGTGGTCGGTTGGGTCATTCCGTCTGTCCGTCTGTCAGTCGGTCCGTCATCAGTTGGTCCCTTTACGTGTGGTCAGGCCCTTGGTCAGCCGCCCAGGCACGTTTCATCTGGTTCTCTGGACTATATCAAATAACGACTATTGACTATGCCCCTGCCGCTGCTGTGCATGTGTGTGTATTGGTGTGTCCTGTCGTGTCGTGTCCTG
**************************************************..(((..(((.(((.(((.(((.........))).)))...((((..(((((((((........(((((..((((...)))).)))))(((((.........)))))......))))............)))))..)))).))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
 M020
head
..................................................................................................................GTAGTGAGGGCCTTGGTCA...................................................................................................................... 19 3 4 120.25 481 287 96 87 7 4
.....................................................................................................................GTGAGGGCCTTGGTCAGACGC................................................................................................................. 21 3 1 115.00 115 65 36 11 3 0
..................................................................................................................GTAGTGAGGGCCTTGGTCAG..................................................................................................................... 20 3 2 63.50 127 81 10 35 1 0
.....................................................................................................................GTGAGGGCCTTGGTCAGAC................................................................................................................... 19 3 5 35.20 176 120 40 11 3 2
....................................................................................................................AGTGAGGGCCTTGGTCAG..................................................................................................................... 18 3 20 24.55 491 351 32 85 22 1
...................................................................................................................TAGTGAGGGCCTTGGTCAG..................................................................................................................... 19 3 5 21.60 108 50 1 52 5 0
........................................................................................................................AGGGCCTTGGTCAGACGC................................................................................................................. 18 2 3 18.00 54 25 26 0 2 1
......................................................................................................................TGAGGGCCTTGGTCAGACGC................................................................................................................. 20 3 4 18.00 72 56 8 4 4 0
.....................................................................................................................GTGAGGGCCTTGGTCAGACG.................................................................................................................. 20 3 4 14.25 57 32 13 11 1 0
..................................................................................................................GTAGTGAGGGCCTTGGTC....................................................................................................................... 18 3 20 8.40 168 0 168 0 0 0
...............................................................................................................CGTGTAGTGAGGGCCTTGGTCA...................................................................................................................... 22 3 1 7.00 7 7 0 0 0 0
......................................................................................................................TGAGGGCCTTGGTCAGACG.................................................................................................................. 19 3 14 4.36 61 38 2 15 6 0
......................................................................................................................TGAGGGCCTTGGTCAGAC................................................................................................................... 18 3 20 4.00 80 78 0 1 1 0
...............................................................................................................CGTGTAGTGAGGGCCTTGGTC....................................................................................................................... 21 3 1 4.00 4 1 0 3 0 0
........................................................................................................................AGGGCCTTGGTCAGACGCA................................................................................................................ 19 3 10 3.30 33 25 6 2 0 0
....................................................................................................................GGTGAGGGCCTTGGTCAG..................................................................................................................... 18 2 1 2.00 2 1 0 1 0 0
....................................................................................................................GGTGAGGGCCTTGGTCAGACGC................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0
.....................................................................................................................GTGAGGGCCTTGGTCAGCC................................................................................................................... 19 2 1 1.00 1 1 0 0 0 0
..................................................................................................................GTGGTGAGGGCCTTGGTCA...................................................................................................................... 19 2 1 1.00 1 1 0 0 0 0
...............................................................................................................CGGGTAGTCAGGGCCTTGGTCA...................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..................................................................................................................GTAGTGAGGGCCTTGGTCAGCC................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0
..................................................................................................................GTAGTGAGGCCCTTGGTCA...................................................................................................................... 19 2 1 1.00 1 1 0 0 0 0
................................................................................................................GTGTAGTGAGGGCCTTGGTCA...................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
..................................................................................................................GTAGTCAGGGCCTTGGTCA...................................................................................................................... 19 2 1 1.00 1 1 0 0 0 0
..................................................................................................................GTAGTGAGGCCCTTGGTCAGAC................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
...................................................................................................................TGGTGAGGGCCTTGGTCAGACGC................................................................................................................. 23 3 1 1.00 1 1 0 0 0 0
.................................................................................................................TGTAGTGAGGGCCTTGGTCA...................................................................................................................... 20 3 1 1.00 1 0 0 1 0 0
..................................................................................................................GTAGTGAGGCCCTTGGTC....................................................................................................................... 18 2 1 1.00 1 1 0 0 0 0
.....................................................................................................................GTTAGGGCCTTGGTCAGACG.................................................................................................................. 20 3 1 1.00 1 1 0 0 0 0
........................................................................................................................AGGCCCTTGGTCAGACGCA................................................................................................................ 19 2 1 1.00 1 1 0 0 0 0
.....................................................................................................................GTTAGGGCCTTGGTCAGACGC................................................................................................................. 21 3 1 1.00 1 0 1 0 0 0
................................................................................................................GGGTAGTCAGGGCCTTGGTCA...................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................GTGCATGTGTGTGTATTGGT....................... 20 0 1 1.00 1 0 1 0 0 0
...............................................................................................................CGGGTAGTGAGGCCCTTGGTC....................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
........................................................................................................................AGGGCCTTGGTCAGACGCAC............................................................................................................... 20 3 1 1.00 1 1 0 0 0 0
.....................................................................................................................GTGAGGTCCTTGGTCAGACGC................................................................................................................. 21 3 1 1.00 1 0 1 0 0 0
..................................................................................................................GTGGTGAGGGCCTTGGTCAGACGC................................................................................................................. 24 3 1 1.00 1 0 1 0 0 0
................................................................................................................GGGTAGTCAGGGCCTTGGTCAG..................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
......................................................................................................................TGAGGGCCTTGGTCAGCCGC................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0
.......................................................................................................................GAGGGCCTTGGTCAGCCGC................................................................................................................. 19 2 1 1.00 1 1 0 0 0 0
...............................................................................................................CGTGTAGTGAGGGCCTTGGT........................................................................................................................ 20 3 3 1.00 3 2 0 1 0 0
.....................................................................................................................GTGAGGCCCTTGGTCAGA.................................................................................................................... 18 2 3 1.00 3 1 1 1 0 0
...............................................................................................................CGGGTAGTGAGGCCCTTGGT........................................................................................................................ 20 3 1 1.00 1 0 0 1 0 0
...............................................................................................................CGTGTAGTGAGGGCCTTGGTCAG..................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0
...................................................................................................................TAGTGAGGGCCTTGGTCA...................................................................................................................... 18 3 20 0.75 15 0 15 0 0 0
....................................................................................................................AGTGAGGCCCTTGGTCAG..................................................................................................................... 18 2 3 0.67 2 2 0 0 0 0
.................................................................................................................TGTAGTGAGGGCCTTGGTC....................................................................................................................... 19 3 4 0.50 2 2 0 0 0 0
........................................................................................................................AGGTCCTTGGTCAGACGC................................................................................................................. 18 2 2 0.50 1 1 0 0 0 0
.....GAGGACGACGACGACGACGTCGA............................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
......................................................................................................................TGAGGGCCTTGGTCAGTCGC................................................................................................................. 20 3 3 0.33 1 1 0 0 0 0
.....GAGGACGACGACGACGACGTC................................................................................................................................................................................................................................. 21 0 3 0.33 1 0 0 1 0 0
................................................................................................................GTGTAGTGAGGGCCTTGGT........................................................................................................................ 19 3 12 0.33 4 4 0 0 0 0
..................................................................................................................GTCGTGAGGGCCTTGGTCAG..................................................................................................................... 20 3 3 0.33 1 0 0 0 1 0
.....................................................................................................................GTCAGGGCCTTGGTCAGA.................................................................................................................... 18 2 4 0.25 1 1 0 0 0 0
...............................................................................................................CGTGTAGTGAGGGCCTTGG......................................................................................................................... 19 3 8 0.25 2 0 0 2 0 0
...............................................................................................................CGGGTGGTGAGGGCCTTGGTC....................................................................................................................... 21 3 4 0.25 1 0 1 0 0 0
..................................................................................................................GTAGTTAGGGCCTTGGTCAG..................................................................................................................... 20 3 4 0.25 1 0 0 1 0 0
.....................................................................................................................GTGAGGGCCTTGGTCAGGC................................................................................................................... 19 3 5 0.20 1 1 0 0 0 0
..........................................................................................................................................CAAGGCACGCTTGATCTGG.............................................................................................. 19 3 5 0.20 1 1 0 0 0 0
....................................................................................................................................................................................................................................GTGTCCTGGCGTGCCGTG..... 18 2 5 0.20 1 1 0 0 0 0
............................................................................................................................................AGGCACGCTTGATCTGGCT............................................................................................ 19 3 6 0.17 1 1 0 0 0 0
................................................................................................................GGGTGGTGAGGGCCTTGGTCA...................................................................................................................... 21 3 6 0.17 1 0 1 0 0 0
.........................................................................................................................GGGCCTTGGTCAGACGCA................................................................................................................ 18 3 20 0.15 3 0 3 0 0 0
.........................................................GGGTCAATCCGTCTGCTCG............................................................................................................................................................................... 19 3 7 0.14 1 0 0 1 0 0
...............................................................................................................CGGGTAGTGAGGCCCTTG.......................................................................................................................... 18 3 15 0.13 2 2 0 0 0 0
..................................................................................................................GTAGTGAGGTCCTTGGTCA...................................................................................................................... 19 3 8 0.13 1 0 1 0 0 0
.....................................................................................................................GTTAGGGCCTTGGTCAGAC................................................................................................................... 19 3 10 0.10 1 0 1 0 0 0
.................GAAGACGTTGAAGTTGATGA...................................................................................................................................................................................................................... 20 2 15 0.07 1 0 0 1 0 0
.......................................................................................................................TAGGGCCTTGGTCAGACGC................................................................................................................. 19 3 19 0.05 1 1 0 0 0 0
..................................................................................................................GGGGTGAGGGCCTTGGTCA...................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0
.....................................................................................................................GTGAGGGCCTTGGTCAGG.................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0
..............................................................................................................GCGTGTGGTGATGCCCTTG.......................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0
......................................................................................................................TTAGGGCCTTGGTCAGAC................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TGCTGCTCCTGCTGCTGCTGCTGCAGCTTCAACTACTACTGCTACTCCACCAGCCAACCCAGTAAGGCAGACAGGCAGACAGTCAGCCAGGCAGTAGTCAACCAGGGAAATGCACACCAGTCCGGGAACCAGTCGGCGGGTCCGTGCAAAGTAGACCAAGAGACCTGATATAGTTTATTGCTGATAACTGATACGGGGACGGCGACGACACGTACACACACATAACCACACAGGACAGCACAGCACAGGAC
**************************************************..(((..(((.(((.(((.(((.........))).)))...((((..(((((((((........(((((..((((...)))).)))))(((((.........)))))......))))............)))))..)))).))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V117
male body		 V119
head
 V118
embryo
.........................................................CCCAGAAAGGCAGACTGGC............................................................................................................................................................................... 19 2 2 1.50 3 2 1 0 0 0
.....................................................CCAACCCAGTAAGGCAGACAGGCAGAC........................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.........................................................CCCAGAAAGGCAGACTGGCG.............................................................................................................................................................................. 20 3 10 0.90 9 6 0 1 2 0
.......................................................ATCCCAGAAAGGCAGACTG................................................................................................................................................................................. 19 3 20 0.75 15 12 0 2 1 0
......................................................TATCCCAGAAAGGCAGAC................................................................................................................................................................................... 18 3 20 0.70 14 9 2 1 2 0
.......................................................ATCCCAGAAAGGCAGACTGG................................................................................................................................................................................ 20 3 4 0.50 2 2 0 0 0 0
.........................................................CCCAGAAAGGCAGAAAGGC............................................................................................................................................................................... 19 2 2 0.50 1 0 1 0 0 0
...........CTGCTGCTGCTGCAGCTT.............................................................................................................................................................................................................................. 18 0 3 0.33 1 0 1 0 0 0
......................................................................................................CGGGGAAAGGCAAACCAGTC................................................................................................................................. 20 3 12 0.33 4 0 0 4 0 0
..................................................................................................................................AGTCCGCGGGTCGTTGCAA...................................................................................................... 19 3 10 0.30 3 1 0 1 0 1
.........................................................CCCAGAAAGGCAGACTGG................................................................................................................................................................................ 18 2 7 0.29 2 2 0 0 0 0
........................................................................................AGGCAGTAGTCCATCTGGG................................................................................................................................................ 19 3 5 0.20 1 1 0 0 0 0
........................................................................................................................................................................................................GGAGACGACACGGACACAC................................ 19 2 6 0.17 1 0 0 0 1 0
.........................................................CCCAGAAAGGCAGAAAGG................................................................................................................................................................................ 18 2 7 0.14 1 1 0 0 0 0
.......................................................................................................................................................................................................................................AGGACAGCATTGCAGAGGAC 20 3 9 0.11 1 0 0 1 0 0
........................................................TCCCAGAAAGGCAGACTGGC............................................................................................................................................................................... 20 3 11 0.09 1 1 0 0 0 0
..............................................................................ACAATCAGGCAGGAAGTAG.......................................................................................................................................................... 19 3 14 0.07 1 1 0 0 0 0
..................................................................................................................................................................................GGCTGATAGCTGTTACGGG...................................................... 19 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004511:564155-564405 + dwi_463 ACGACGAGGACGACGACGACGACGTCGAAGTTGATGATGACGATGAGGTGGTCGGTTGGGTCATTCCGTCTGTCCGTCTGTCAGTCGGTCCGTCATCAGTTGGTCCCTTTACGTGTGGTCAGGCCC------------------------------------------------------------------------------TTGGTCAGCCG-----------------------CCCAGGCACGTTTCATC----------------TGGTTCTCTG--------------------------------------GACTATATCAAATAACGACTATTGACTATGCCCC-TG----------C--CGCTGCTGTGCATGTGTGTGTATTGGTGTGTCCT--------------GTCGTGTCGTGTCC------T-G
droVir3 scaffold_13049:19775214-19775428 + GGGAACGCTCGGC----------------------------------CTCGTCCCTTGTCCCAGGTCCCTTGTCCG---------------------------TCGTCCCACGTCCCACGTTCCCCT---G------------------------CCCCT------------------------TGCGTGTATATGTGGTCGCACTGGTCAGCCG-----------------------CCCAGGCACGTTTCATCATGGGCTGCTTGTT---GGA-TT--C--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCAG-TC----------TCTGCC--------------------------GCTG--TCCTGCCCTGGTCGTCGTGTCGTGTCC------A-G
droMoj3 scaffold_6680:7469431-7469568 + -------------------------------------------------------------------------------------------------------CC--CTTGCGTGTGGTCG---------------------------------------------------------------------------------CACTGGTCAGCCG-----------------------CCCAGGCACGTTTCATCATGGGTTGCTT---GTTGGT-TT--C--------------------------------------GACTATATCAAATAACGACTATTGACTGCGCCTGCTGTCTCTCGCCTT--CGC--------------------------CCTCG--------------CTCGTGTCGTGTCC------T-G
droGri2 scaffold_15110:17594454-17594636 - CCCACCTCCACCC-----------------------------------------ATCCACCCATCCACCCGTTC-------------------------------------------------------------------------------------AAACGTCCCCCATGTCCTTGCCCTTTGCGTG------TGGTCGCACTGGTCAGCCG-----------------------CCCAGGCACGTTTCATCATGGGTTGC---TTGTTGGT-TT--C--------------------------------------GACTATATCAAATAACGACTATTGACTGCGCCTG-TC----------T--CTG--------------------------CACCCGTC-----------CTGAC-CCGGGTCC------T-G
dp5 4_group5:907250-907422 - ACGATGACGACGACGACGACGACGTTGTCGATGATGATGATGGTGACGATGTCGACGCGGT---------------------------------------------------ACTTGGCCAGCTGCCGC---TTCTTCT---------------------------------GTTCCT----------------------------------------------------------------------------------------------GCTTCTCTGAAGCGCTTTAAGTGCGGTCCGTCGTCGTCCTCGCCAC---------------------------------TC-GG----------C--GAC---------------------AT---TCTTT--------------CTCATCTTGGGCCTCTGGTCT--
droPer2 scaffold_10531:623-841 - CCGACGACGATGACGACGACGACGACGACGACGACGACGACGATGCCGTCGACGATATGGACATTGAGTCGATTGATGTCT----------CTGATGTGTTGTTGAAATTTCGTGA----------------------T---------------------------------GTTCAC------------------------------------------------------------------------------------GTTTATTGTTAGC-ATTTC---------TATTGCCAATTATCGCTGGCAATGCCGCAGACGATGCC-GATGGCGA----------TGCCAA------------------------TGGCAATGTCGGCATCAA---TATCT--------------CTGGTGTTGT--TG------T--
droAna3 scaffold_13337:21795486-21795677 + GG-----------------------------------------------------------------------------------------------------TCCCTTTTCGTGCGGTCAGCTCCTGC---TCCCGCTCCTGCTCCTGCTCCTGCTCCT------------------------G----CTCGATG------TCCTGGTCAGCGGTGGCGGT------CG----CCGTCCCAGGCACGTTCCATCATGGCGGGCATGTTGTTGGT-CT-TC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTC-TG----------T--GGC--------------------------GCTTC--------------GCCCTGTCGTGACC------C-G
droBip1 scf7180000396730:271673-271808 + -------------------------------------------------------------------------------------------------------AC-------------------------------------------------------------------------------------CCGATG------TCCTGGTCAGCGGTGGCGGC------GA----CCGTCCCAGGCACGTTCCATCATGGCGGGCATGTTGTTGGT-CT-TC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTC-TG----------T--GGC--------------------------GCTTC--------------GCCCTGTCGTGACC------C-G
droKik1 scf7180000302808:372318-372486 + -------------------------------------------------------------------------------------------------------CC--CTTACGTGCGGTCAGCTCCT---GCTCCTAC------------TCGGGCTCCT------------------------G----GTCGATG------TCCTGGTCAGCGG-------------------CGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-GTGGC--------------------------------------GACTACATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTTC--------------GTGCCGTCGTTTCC------CTA
droFic1 scf7180000454048:57476-57535 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------T--
droEle1 scf7180000491186:1582109-1582233 + ACGACGCCGACGACGACAACGGCGCTGATGTCGATGATGGCGTCGCAGT---------------------------------------------------------------ACTTGGCCAGCTGCCGC---TCCTTCT------------------TCC------------------------G----CTCGTTC------C---------------------------------------------------------------------GCTTCCCTG--------------------------------------GATCGCCTCAAGTGCGGTCC-----------------------------------------------------------------------------------GACGTCCTC------G-G
droRho1 scf7180000779509:235145-235284 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG------TCCTGGTCAGCGGCGGCAGCGGCGGCGGCGAACGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC---------
droBia1 scf7180000302428:6271623-6271802 + -------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCTCCGG------------------------CTCCTGATGTCCC----------------G----GCCGATG------TCCTGGTCAGCAGTGGCGGCCGT---GG----CGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--
droTak1 scf7180000415161:96079-96246 - -------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCCGC---TCCT------------------GCTCCT------------------------G----GTCGATG------TCCTGGTCAGCAGAGGCGG-------------CGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGCCC---------
droEug1 scf7180000409121:182822-182993 - -------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GCCGATG------TCCTGGTCAGCAGCGGCGGCGGTAACGG----CGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--
dm3 chr3L:13645288-13645447 - -------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GTCGATG------TCCTGGTCAGCGGCGGC----------------GGTCTCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--
droSim2 3l:13335510-13335669 - -------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GTCGATG------TCCTGGTCAGCGGCGGC----------------GGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--
droSec2 scaffold_0:5806925-5807084 - -------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GTCGATG------TCCTGGTCAGCGGCGGC----------------GTTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--
droYak3 3L:13739660-13739828 - -------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GTCGATG------TCCTGGTCAGCGGCAGCGGC---AGCGG----CGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--
droEre2 scaffold_4784:13647905-13648056 - -------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GCCGATG------TCCTGGTCAGCGG------------------------CCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGGCTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
ACGACGAGGACGACGACGACGACGTCGAAGTTGATGATGACGATGAGGTGGTCGGTTGGGTCATTCCGTCTGTCCGTCTGTCAGTCGGTCCGTCATCAGTTGGTCCCTTTACGTGTGGTCAGGCCC------------------------------------------------------------------------------TTGGTCAGCCG-----------------------CCCAGGCACGTTTCATC----------------TGGTTCTCTG--------------------------------------GACTATATCAAATAACGACTATTGACTATGCCCC-TG----------C--CGCTGCTGTGCATGTGTGTGTATTGGTGTGTCCT--------------GTCGTGTCGTGTCC------T-GSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................GTGCATGTGTGTGTATTGGT............................................2011.00100010
.....GAGGACGACGACGACGACGTCGA............................................................................................................................................................................................................................................................................................................................................................................................................................2320.50101000
.....GAGGACGACGACGACGACGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100100
droVir3
GGGAACGCTCGGC----------------------------------CTCGTCCCTTGTCCCAGGTCCCTTGTCCG---------------------------TCGTCCCACGTCCCACGTTCCCCT---G------------------------CCCCT------------------------TGCGTGTATATGTGGTCGCACTGGTCAGCCG-----------------------CCCAGGCACGTTTCATCATGGGCTGCTTGTT---GGA-TT--C--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCAG-TC----------TCTGCC--------------------------GCTG--TCCTGCCCTGGTCGTCGTGTCGTGTCC------A-GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
-------------------------------------------------------------------------------------------------------CC--CTTGCGTGTGGTCG---------------------------------------------------------------------------------CACTGGTCAGCCG-----------------------CCCAGGCACGTTTCATCATGGGTTGCTT---GTTGGT-TT--C--------------------------------------GACTATATCAAATAACGACTATTGACTGCGCCTGCTGTCTCTCGCCTT--CGC--------------------------CCTCG--------------CTCGTGTCGTGTCC------T-GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................ACGACTATTGACTGCGCCTGC......................................................................................2111.001100000
droGri2
CCCACCTCCACCC-----------------------------------------ATCCACCCATCCACCCGTTC-------------------------------------------------------------------------------------AAACGTCCCCCATGTCCTTGCCCTTTGCGTG------TGGTCGCACTGGTCAGCCG-----------------------CCCAGGCACGTTTCATCATGGGTTGC---TTGTTGGT-TT--C--------------------------------------GACTATATCAAATAACGACTATTGACTGCGCCTG-TC----------T--CTG--------------------------CACCCGTC-----------CTGAC-CCGGGTCC------T-GSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
ACGATGACGACGACGACGACGACGTTGTCGATGATGATGATGGTGACGATGTCGACGCGGT---------------------------------------------------ACTTGGCCAGCTGCCGC---TTCTTCT---------------------------------GTTCCT----------------------------------------------------------------------------------------------GCTTCTCTGAAGCGCTTTAAGTGCGGTCCGTCGTCGTCCTCGCCAC---------------------------------TC-GG----------C--GAC---------------------AT---TCTTT--------------CTCATCTTGGGCCTCTGGTCT--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......CGACGACGACGACGACGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................19160.0610100000000
....TGACGACGACGACGACGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
CCGACGACGATGACGACGACGACGACGACGACGACGACGACGATGCCGTCGACGATATGGACATTGAGTCGATTGATGTCT----------CTGATGTGTTGTTGAAATTTCGTGA----------------------T---------------------------------GTTCAC------------------------------------------------------------------------------------GTTTATTGTTAGC-ATTTC---------TATTGCCAATTATCGCTGGCAATGCCGCAGACGATGCC-GATGGCGA----------TGCCAA------------------------TGGCAATGTCGGCATCAA---TATCT--------------CTGGTGTTGT--TG------T--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GATG...........................................................................................................26311.33340331000
....................................................CGATATGGACATTGAGTCGATTGATG..........................................................................................................................................................................................................................................................................................................................................................................26510.005012570017
............................................................................................................................................................................................................................................................................TGTTAGC-ATTTC---------TATTGCCAATTATCGC......................................................................................................................................2838.67260260000
.......................................................TATGGACATTGAGTCGATTGATGTC........................................................................................................................................................................................................................................................................................................................................................................2557.003507170110
.......................................................TATGGACATTGAGTCGATTGATGT.........................................................................................................................................................................................................................................................................................................................................................................2457.003501770011
.......................................................TATGGACATTGAGTCGATTGATG..........................................................................................................................................................................................................................................................................................................................................................................2356.80340217006
..............................................................................TCT----------CTGATGTGTTGTTGAAATTTCG.......................................................................................................................................................................................................................................................................................................................................2526.50130130000
...........................................TGCCGTCGACGATATGGACATTGAGT...................................................................................................................................................................................................................................................................................................................................................................................2656.003041210013
..............................................................................................................................................................................................................................................................................................................TCGCTGGCAATGCCGCAGACGATG..................................................................................................................2435.67170152000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GA.............................................................................................................2435.00150150000
..............................................................................TCT----------CTGATGTGTTGTTGAAATTTCGTGA----------------------..............................................................................................................................................................................................................................................................................................................2824.509080001
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGCGA----------TG...........................................................................................2644.25171151000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-G..............................................................................................................2334.00120120000
...........................................................................................................................................................................................................................................................................................................................................................TGCCAA------------------------TGGCAATGTCGGCATCAA---TA........................................2653.80190190000
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGCGA----------.............................................................................................2443.25130121000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GAT............................................................................................................2533.009090000
..............................................................................TCT----------CTGATGTGTTGTTGAAATTTCGT......................................................................................................................................................................................................................................................................................................................................2623.006020004
...........................................................................................................................................................................................................................................................................................................................................TGGCGA----------TGCCAA------------------------TGGCAATGTCGGC..................................................2552.60132110000
.........................................................................................................................................................................................................................................................................................................................................................................................TGGCAATGTCGGCATCAA---TATCT--------------CTGG...................2752.40120111000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GATGG..........................................................................................................2732.337070000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATG..................................................................................................................2032.337061000
...............................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCATCAA---TATCT--------------CTGGTGTTG..............2652.00100100000
...........................................................................................................................................................................................................................................................................................................................................................TGCCAA------------------------TGGCAATGTCGGCATCAA---T.........................................2552.00100100000
...............................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCATCAA---TATCT--------------CTGGTGT................2452.0010280000
.........................................................................................................................................................................................................................................................................................................................................................................................TGGCAATGTCGGCATCAA---TATCT--------------CTG....................2652.00100100000
...........................................................................................................................................................................................................................................................................................................................................TGGCGA----------TGCCAA------------------------TGGCAATGTCGG...................................................2452.00100100000
...........................................TGCCGTCGACGATATGGACATTGAGTC..................................................................................................................................................................................................................................................................................................................................................................................2752.0010430003
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATG...........................................................................................................2041.757250000
....................................................CGATATGGACATTGAGTCGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................2551.608440000
...........................................TGCCGTCGACGATATGGACATTGAG....................................................................................................................................................................................................................................................................................................................................................................................2551.608070001
......................................GACGATGCCGTCGACGATATGGACAT........................................................................................................................................................................................................................................................................................................................................................................................2651.608600002
................................................................TGAGTCGATTGATGTCT----------CTGATGTG.....................................................................................................................................................................................................................................................................................................................................................2521.503021000
..........................................................................GATGTCT----------CTGATGTGTTGTTGAAATT..........................................................................................................................................................................................................................................................................................................................................2621.503010002
.............................................................................GTCT----------CTGATGTGTTGTTGAAATTTCGT......................................................................................................................................................................................................................................................................................................................................2721.503000003
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGCGA----------T............................................................................................2541.506060000
...............................................................................................TGTGTTGTTGAAATTTCGTGA----------------------T---------------------------------GT..........................................................................................................................................................................................................................................................................2421.503021000
.....................................CGACGATGCCGTCGACGATATGGAC..........................................................................................................................................................................................................................................................................................................................................................................................2551.407004003
...............................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCATCAA---TATCT--------------CTGGTG.................2351.407070000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-...............................................................................................................2231.334031000
..............................................................................................................................................................................................................................................................................................................TCGCTGGCAATGCCGCAGACGATA..................................................................................................................2431.334040000
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGCG........................................................................................................2341.255050000
...............................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCATCAA---TATCT--------------CTGG...................2151.206060000
...............................................................................CT----------CTGATGTGTTGTTGAAATTTCGTGA----------------------..............................................................................................................................................................................................................................................................................................................2721.002020000
.......................................................TATGGACATTGAGTCGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................2251.005012002
...........................................................................................................................................................................................................................................................................................................TTATCGCTGGCAATGCCGCAGACGA....................................................................................................................2531.003030000
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGG..........................................................................................................2141.004040000
...................................................................................................................................................................................................................................................................................................................GGCAATGCCGCAGACGATGCC-GATG...........................................................................................................2531.003030000
............................................................................................................................................................................................................................................................................................................TATCGCTGGCAATGCCGCAGACGA....................................................................................................................2431.003030000
.............................................................................GTCT----------CTGATGTGTTGTTGAAATTTCG.......................................................................................................................................................................................................................................................................................................................................2621.002010001
...........................................................................................................................................................................................................................................................................................................TTATCGCTGGCAATGCCGCAGACG.....................................................................................................................2431.003030000
.........................................................................................................................................................................................................................................................................TATTGTTAGC-ATTTC---------TATTGCCAA.............................................................................................................................................2431.003030000
....................................................................................................TGTTGAAATTTCGTGA----------------------T---------------------------------GTTCAC------------------------------------------------------------------------------------GTT...............................................................................................................................................................................2631.003030000
..............................................................................................................................................................................................................................................................................................................TCGCTGGCAATGCCGCAGACGATGC.................................................................................................................2531.003030000
.........................................................................................................................................................................................................................................................................TATTGTTAGC-ATTTC---------TATTGCCAAT............................................................................................................................................2531.003030000
..........................................................................................................................................................................................................................................................................................................................................................................................GGCAATGTCGGCATCAA---TATCT--------------CTGG...................2651.005050000
............................................................................................................................................................................................................................................................................TGTTAGC-ATTTC---------TATTGCCAATTATCG.......................................................................................................................................2731.003030000
....................................................CGATATGGACATTGAGTCGATT..............................................................................................................................................................................................................................................................................................................................................................................2251.005040001
...............................................................................CT----------CTGATGTGTTGTTGAAATTTCG.......................................................................................................................................................................................................................................................................................................................................2421.002020000
.....................................................................................................................................................................................................................................................................................................TGCCAATTATCGCTGGCAATGCCGCAGA.......................................................................................................................2831.003030000
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGC.........................................................................................................2241.004040000
...........................................................................................................................................................................................................................................................................................................................................................TGCCAA------------------------TGGCAATGTCGGC..................................................1951.005410000
...........................................................................................................................................................................................................................................................................................................................................TGGCGA----------TGCCAA------------------------TGGCAATGTCGGCA.................................................2650.804040000
.............................................................CATTGAGTCGATTGATGTCT----------CTGAT........................................................................................................................................................................................................................................................................................................................................................2550.804220000
...........................................TGCCGTCGACGATATGGACATTGAGA...................................................................................................................................................................................................................................................................................................................................................................................2650.804031000
........................................CGATGCCGTCGACGATATGGACAT........................................................................................................................................................................................................................................................................................................................................................................................2450.804120001
...........................................................................................................................................................................................................................................................................................................................................................TGCCAA------------------------TGGCAATGTCGGCAT................................................2150.804220000
.....................................................GATATGGACATTGAGTCGATTGATG..........................................................................................................................................................................................................................................................................................................................................................................2550.804040000
.............................................................................................................................................................................................................................................................................................................................................................................................AATGTCGGCATCAA---TATCT--------------CTGGTGT................2650.804400000
..............................................................................................................................................................................................................................................................................TTAGC-ATTTC---------TATTGCCAATTATCGC......................................................................................................................................2630.672110000
.........................................................................................................................................................................................................................................................................TATTGTTAGC-ATTTC---------TATTGCC...............................................................................................................................................2230.672020000
.....................................................................................................................................................................................................................................................................................................TGCCAATTATCGCTGGCAATGCCGCAG........................................................................................................................2730.672020000
..............................................................................................................................................................................TCAC------------------------------------------------------------------------------------GTTTATTGTTAGC-ATTTC---------TAT...................................................................................................................................................2530.672020000
.................................................................................................................................................................................................................................................................................................................CTGGCAATGCCGCAGACGATGCC-GATG...........................................................................................................2730.672020000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GATGGC.........................................................................................................2830.672020000
............................................................................................................................................................................................................................................................................................................TATCGCTGGCAATGCCGCAGACG.....................................................................................................................2330.672020000
.................................................................................................TGTTGTTGAAATTTCGTGA----------------------T---------------------------------GTTCAC------------------------------------------------------------------------------------GT................................................................................................................................................................................2830.672020000
..............................................................................................................................................................................................................................................................................................................TCGCTGGCAATGCCGCAGACGATGA.................................................................................................................2530.672020000
.................................................................................................TGTTGTTGAAATTTCGTGA----------------------T---------------------------------GT..........................................................................................................................................................................................................................................................................2230.672010001
...........................................................................................................................................................................................................................................................................................................................................................TGCCAA------------------------TGGCAATGTCGGCATC...............................................2250.603210000
........................................CGATGCCGTCGACGATATGGAC..........................................................................................................................................................................................................................................................................................................................................................................................2250.603020001
.........................................................................................................................................................................................................................................................................................................................................................................................TGGCAATGTCGGCATCAA---TATCT--------------CT.....................2550.603021000
.........................................................................................................................................................................................................................................................................................................................................................................................TGGCAATGTCGGCATCAA---TATCT--------------.......................2350.603030000
...............................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCATCAA---TATCT--------------CTGGTGTT...............2550.603030000
............................................................................................................................................................................................................................................................................................................................................GGCGA----------TGCCAA------------------------TGGCAATGTCGG...................................................2350.603030000
...........................................TGCCGTCGACGATATGGACATTGA.....................................................................................................................................................................................................................................................................................................................................................................................2450.603030000
...........................................TGCCGTCGACGATATGGACATTGAGTA..................................................................................................................................................................................................................................................................................................................................................................................2750.603210000
.............................................................................................................................................................................................................................................................................................................................................................................................AATGTCGGCATCAA---TATCT--------------CTGGTG.................2550.603300000
...........................................................................................................................................................................................................................................................................................................................................TGGCGA----------TGCCAA------------------------TGGCAATGTCGGCAT................................................2750.603030000
...............................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCATCAA---TATCT--------------CTG....................2050.603030000
...........................................................................................................................................................................................................................................................................................................................................................TGCCAA------------------------TGGCAATGTCGGCATCAA---..........................................2450.603030000
...........................................................................................................................................................................................................................................................................................................................................TGGCGA----------TGCCAA------------------------TGGCAATGTCG....................................................2350.603030000
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GAA............................................................................................................1940.502011000
..............................................................................TCT----------CTGATGTGTTGTTGAAATTTCGTG.....................................................................................................................................................................................................................................................................................................................................2720.501010000
.....................................................................CGATTGATGTCT----------CTGATGTGTTGTTG...............................................................................................................................................................................................................................................................................................................................................2620.501010000
......................................................................GATTGATGTCT----------CTGATGTGTTG..................................................................................................................................................................................................................................................................................................................................................2220.501010000
..............................................................................TCT----------CTGATGTGTTGTTGAAG............................................................................................................................................................................................................................................................................................................................................2020.501010000
............................................................................................TGATGTGTTGTTGAAATTTCGTGA----------------------A---------------------------------............................................................................................................................................................................................................................................................................2520.501010000
.........................................................................................................................................................................................................................................................................................................................GCCGCAGACGATGCC-GATGG..........................................................................................................2040.502020000
...............................................................................CT----------CTGATGTGTTGTTGAAATTTCGTGA----------------------A---------------------------------............................................................................................................................................................................................................................................................................2820.501010000
................................................................TGAGTCGATTGATGTCT----------CTGATGTGT....................................................................................................................................................................................................................................................................................................................................................2620.501010000
.............................................................................GTCT----------CTGATGTGTTGTTGAAATT..........................................................................................................................................................................................................................................................................................................................................2320.501000001
................................................................................T----------CTGATGTGTTGTTGAAATTTCGT......................................................................................................................................................................................................................................................................................................................................2420.501000001
............................................................................TGTCT----------CTGATGTGTTGTTGAAAT...........................................................................................................................................................................................................................................................................................................................................2320.501010000
...........................................................................................CTGATGTGTTGTTGAAATTTCG.......................................................................................................................................................................................................................................................................................................................................2220.501010000
............................................................................................TGATGTGTTGTTGAAATTTCGTGA----------------------T---------------------------------G...........................................................................................................................................................................................................................................................................2620.501000001
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGCGA----------A............................................................................................2540.502020000
...............................................................................CT----------CTGATGTGTTGTTGAAATTTCGTG.....................................................................................................................................................................................................................................................................................................................................2620.501010000
....................................................................................................................................................................................................................................................................................................................GCAATGCCGCAGACGATGCC-GATGG..........................................................................................................2540.502020000
..............................................................................TCT----------CTGATGTGTTGTTGAAAT...........................................................................................................................................................................................................................................................................................................................................2120.501010000
..............................................................................TCT----------CTGATGTGTTGTTGAAATTTC........................................................................................................................................................................................................................................................................................................................................2420.501010000
...............................................................................................TGTGTTGTTGAAATTTCGTGA----------------------T---------------------------------GTTC........................................................................................................................................................................................................................................................................2620.501001000
...............................................................................................TGTGTTGTTGAAATTTCGTGA----------------------T---------------------------------G...........................................................................................................................................................................................................................................................................2320.501010000
..............................................................................TCT----------CTGATGTGTTGTTGAAATTT.........................................................................................................................................................................................................................................................................................................................................2320.501010000
...............................................................................................TGTGTTGTTGAAATTTCGTGA----------------------T---------------------------------GTTCA.......................................................................................................................................................................................................................................................................2720.501010000
............................................................................................TGATGTGTTGTTGAAATTTCGTGA----------------------T---------------------------------GTT.........................................................................................................................................................................................................................................................................2820.501000001
................................................................................T----------CTGATGTGTTGTTGAAATTTCGTGA----------------------T---------------------------------G...........................................................................................................................................................................................................................................................................2820.501010000
.........................................................................................................................................................................................................................................................................................................................................................................................TGGCAATGTCGGCATCAA---TAT.......................................2150.402020000
...........................................TGCCGTCGACGATATGGACATTGAA....................................................................................................................................................................................................................................................................................................................................................................................2550.402020000
.........................................................................................................................................................................................................................................................................................................................................................................................TGGCAATGTCGGCATCAA---TA........................................2050.402020000
...........................................TGCCGTCGACGATATGGACATTGAGTCA.................................................................................................................................................................................................................................................................................................................................................................................2850.402200000
...........................................................................................................................................................................................................................................................................................................................................................TGCCAA------------------------TGGCAATGTCGGCATCAA---A.........................................2550.402020000
.....................................CGACGATGCCGTCGACGATATGGACAT........................................................................................................................................................................................................................................................................................................................................................................................2750.402020000
..................................................GACGATATGGACATTGAGTCGATTGATG..........................................................................................................................................................................................................................................................................................................................................................................2850.402000002
.........................................................TGGACATTGAGTCGATTGATG..........................................................................................................................................................................................................................................................................................................................................................................2150.402020000
........................................CGATGCCGTCGACGATATGGACATTG......................................................................................................................................................................................................................................................................................................................................................................................2650.402010001
....................................................CGATATGGACATTGAGTCGATTG.............................................................................................................................................................................................................................................................................................................................................................................2350.402000002
.............................................................CATTGAGTCGATTGATGTCT----------CTGATG.......................................................................................................................................................................................................................................................................................................................................................2650.402011000
........................................................ATGGACATTGAGTCGATTGATGT.........................................................................................................................................................................................................................................................................................................................................................................2350.402020000
...........................................................................................................................................................................................................................................................................................................................................................TGCCAA------------------------TGGCAATGTCGGCATCAA---TATCT--------------.......................2950.402020000
.......................................................TATGGACATTGAGTCGATTGATGA.........................................................................................................................................................................................................................................................................................................................................................................2450.402011000
....................................................CGATATGGACATTGAGTCGATTGATA..........................................................................................................................................................................................................................................................................................................................................................................2650.402010001
.......................................................................................................................................................................................................................................................................................................................................................................................................TCAA---TATCT--------------CTGGTGTTGT--TG------...2150.402020000
...............................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCATCAA---TATCT--------------CTGGTGTTA..............2650.402020000
..........................................................................................................................................................................................................................................................................................................................................................................................GGCAATGTCGGCATCAA---TATCT--------------CTGGT..................2750.402020000
...........................................TGCCGTCGACGATATGGACATTGAGAA..................................................................................................................................................................................................................................................................................................................................................................................2750.402010001
.................................................................................................................................................................................................................................................................................................................................................................................................TCGGCATCAA---TATCT--------------CTGGTGTTGT--T..........2650.402020000
....................................................CGATATGGACATTGAGTCGAT...............................................................................................................................................................................................................................................................................................................................................................................2150.402010001
........................................................ATGGACATTGAGTCGATTGATG..........................................................................................................................................................................................................................................................................................................................................................................2250.402020000
....................................................................................................TGTTGAAATTTCGTGA----------------------T---------------------------------GTTCAC------------------------------------------------------------------------------------GTTA..............................................................................................................................................................................2730.331010000
...........................................................................................................................................................................................................................................................................................................TTATCGCTGGCAATGCCGCAGACGAAA..................................................................................................................2730.331010000
.................................................................................................TGTTGTTGAAATTTCGTGA----------------------T---------------------------------GTTCAA------------------------------------------------------------------------------------A.................................................................................................................................................................................2730.331010000
....................................................................................................TGTTGAAATTTCGTGA----------------------T---------------------------------GTTC........................................................................................................................................................................................................................................................................2130.331010000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GT.............................................................................................................2430.331010000
...................................................................................................................................................................................................................................................................................................................GGCAATGCCGCAGACGATGCC-GAT............................................................................................................2430.331010000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GATGGT.........................................................................................................2830.331010000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GG.............................................................................................................2430.331010000
............................................................................................................................................................................................................................................................................TGTTAGC-ATTTC---------TATTGCCAATTATC........................................................................................................................................2630.331010000
....................................................................................................TGTTGAAATTTCGTGA----------------------T---------------------------------GTTCA.......................................................................................................................................................................................................................................................................2230.331010000
...............................................................................................................................................................................................................................................................................................................CGCTGGCAATGCCGCAGACGATGA.................................................................................................................2430.331010000
...............................................................................................................................................................................................................................................................................................................CGCTGGCAATGCCGCAGACGATGC.................................................................................................................2430.331010000
................................................................................................................................................................................................................................................................................................................GCTGGCAATGCCGCAGACGATGCC-G..............................................................................................................2530.331010000
..............................................................................................................................................................................................................................................................................................................TCGCTGGCAATGCCGCAGACGAT...................................................................................................................2330.331010000
.............................................................................................................................................................................................................................................................................GTTAGC-ATTTC---------TATTGCCAATTATCGC......................................................................................................................................2730.331010000
..............................................................................................................................................................................................................................................................................................................TCGCTGGCAATGCCGCAGACG.....................................................................................................................2130.331010000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GAC............................................................................................................2530.331100000
..............................................................................................................................................................................TCAC------------------------------------------------------------------------------------GTTTATTGTTAGC-ATTTC---------TATTGC................................................................................................................................................2830.331010000
...................................................................................................................................................................................................................................................................................................................GGCAATGCCGCAGACGATGCC-GT.............................................................................................................2330.331010000
................................................................................................................................................................................................................................................................................................................GCTGGCAATGCCGCAGACGATG..................................................................................................................2230.331010000
...........................................................................................................................................................................................................................................................................................................TTATCGCTGGCAATGCCGCAGACT.....................................................................................................................2430.331010000
..................................................................................................GTTGTTGAAATTTCGTGA----------------------T---------------------------------GTTCAC------------------------------------------------------------------------------------G.................................................................................................................................................................................2630.331010000
........................................................................................................................................................................................................................................................................................................CAATTATCGCTGGCAATGCCGCAG........................................................................................................................2430.331010000
............................................................................................................................................................................................................................................................................................................TATCGCTGGCAATGCCGCAGACGATG..................................................................................................................2630.331010000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGC.................................................................................................................2130.331010000
.........................................................................................................................................................................................................................................................................TATTGTTAGC-ATTTC---------TATTG.................................................................................................................................................2030.331010000
.....................................................................................................................................................................................................................................................................................TTTC---------TATTGCCAATTATCGC......................................................................................................................................2030.331001000
............................................................................................................................................................................................................................................................................TGTTAGC-ATTTC---------TATTGCCAATT...........................................................................................................................................2330.331010000
...................................................................................................................................................................................................................................................................................................................GGCAATGCCGCAGACGATGCC-GA.............................................................................................................2330.331010000
.............................................................................................................................................................................TTCAC------------------------------------------------------------------------------------GTTTATTGTTAGC-ATTTC---------TA....................................................................................................................................................2530.331010000
....................................................................................................TGTTGAAATTTCGTGA----------------------T---------------------------------GTTCAC------------------------------------------------------------------------------------G.................................................................................................................................................................................2430.331010000
...............................................................................................................................................................................................................................................................................TAGC-ATTTC---------TATTGCCAATTATCGC......................................................................................................................................2530.331010000
................................................................................................................................................................................................................................................................................AGC-ATTTC---------TATTGCCAATTATCGC......................................................................................................................................2430.331010000
.................................................................................................TGTTGTTGAAATTTCGTGA----------------------T---------------------------------C...........................................................................................................................................................................................................................................................................2130.331000001
.................................................................................................TGTTGTTGAAATTTCGTGA----------------------T---------------------------------GTTCAA------------------------------------------------------------------------------------..................................................................................................................................................................................2630.331010000
.................................................................................................TGTTGTTGAAATTTCGTGA----------------------T---------------------------------G...........................................................................................................................................................................................................................................................................2130.331010000
..............................................................................................................................................................................................................................................................................................................TCGCTGGCAATGCCGCAGACGAAA..................................................................................................................2430.331010000
...........................................................................................................................................................................................................................................................................................................TTATCGCTGGCAATGCCGCAGACC.....................................................................................................................2430.331010000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GATT...........................................................................................................2630.331010000
.................................................................................................................................................................................................................................................................................................................CTGGCAATGCCGCAGACGATGCC-G..............................................................................................................2430.331010000
.................................................................................................................TGA----------------------T---------------------------------GTTCAC------------------------------------------------------------------------------------GTTTATTGTTAGC-AT..................................................................................................................................................................2530.331010000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GATGT..........................................................................................................2730.331010000
................................................................................................................................................................................AC------------------------------------------------------------------------------------GTTTATTGTTAGC-ATTTC---------TAT...................................................................................................................................................2330.331010000
...........................................................................................................................................................................................................................................................................................................TTATCGCTGGCAATGCCGCAGACGAA...................................................................................................................2630.331010000
..................................................................................................................................................................................................................................................................................................................TGGCAATGCCGCAGACGATGCC-GATA...........................................................................................................2630.331010000
...................................................................................................................................................................................................................................................................................................................GGCAATGCCGCAGACGATGCC-GATGG..........................................................................................................2630.331010000
....................................................................................................................................................................................................................................................................................................TTGCCAATTATCGCTGGCAATGCCGCA.........................................................................................................................2730.331010000
...................................................................................................................................................................................................................................................................................................................GGCAATGCCGCAGACGATGCC-G..............................................................................................................2230.331010000
...............................................................................................................................................................................................................................................................................................................CGCTGGCAATGCCGCAGACGATT..................................................................................................................2330.331010000
.................................................................................................................................................................................................................................................................................................................CTGGCAATGCCGCAGACGATGCC-GATGT..........................................................................................................2830.331010000
..............................................................................................................................................................................................................................................................................................................TCGCTGGCAATGCCGCAGACGATGCC-G..............................................................................................................2730.331010000
.........................................................................................................................................................................................................................................................................TATTGTTAGC-ATTTC---------TATTGCCAATTA..........................................................................................................................................2730.331010000
......................................................................................................................................................................................................................................................................................TTC---------TATTGCCAATTATCGCTGGCAA................................................................................................................................2530.331010000
............................................................................................................................................................................................................................................................................................................TATCGCTGGCAATGCCGCAGACGATA..................................................................................................................2630.331010000
...................................................................................................................................................................................................................................................................................................................GGCAATGCCGCAGACGATGCC-GATGGC.........................................................................................................2730.331010000
.....................................................................................................................................................................................................................................................................................................TGCCAATTATCGCTGGCAATGCCGCAA........................................................................................................................2730.331010000
..................................................................................................................GA----------------------T---------------------------------GTTCAC------------------------------------------------------------------------------------GTTTATTGTTAGC-AT..................................................................................................................................................................2430.331010000
................................................................................................GTGTTGTTGAAATTTCGTGA----------------------..............................................................................................................................................................................................................................................................................................................2030.331010000
...........................................................................................................................................................................................................................................................................................................................CGCAGACGATGCC-GATGGCGA----------TG...........................................................................................2340.251010000
..........................................................................................................................................................................................................................................................................................................................CCGCAGACGATGCC-GATGGCGA----------T............................................................................................2340.251010000
.....................................................................................................................................................................................................................................................................................................................CAATGCCGCAGACGATGCC-GATGG..........................................................................................................2440.251010000
...........................................................................................................................................................................................................................................................................................................................CGCAGACGATGCC-GATGGCGA----------A............................................................................................2240.251010000
.........................................................................................................................................................................................................................................................................................................................GCCGCAGACGATGCC-GATG...........................................................................................................1940.251010000
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGA.........................................................................................................2240.251010000
.........................................................................................................................................................................................................................................................................................................................GCCGCAGACGATGCC-GATGGCGA----------.............................................................................................2340.251010000
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGCGA----------AA...........................................................................................2640.251010000
....................................................................................................................................................................................................................................................................................................................GCAATGCCGCAGACGATGCC-G..............................................................................................................2140.251010000
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGAA........................................................................................................2340.251001000
....................................................................................................................................................................................................................................................................................................................GCAATGCCGCAGACGATGCC-GATG...........................................................................................................2440.251010000
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGCGA----------TGC..........................................................................................2740.251010000
.........................................................................................................................................................................................................................................................................................................................GCCGCAGACGATGCC-GATA...........................................................................................................1940.251010000
........................................................................................................................................................................................................................................................................................................................TGCCGCAGACGATGCC-GATGGCGA----------TA...........................................................................................2640.251010000
...........................................TGCCGTCGACGATATGGACATTGAGTAA.................................................................................................................................................................................................................................................................................................................................................................................2850.201100000
..................................................GACGATATGGACATTGAGTCGATT..............................................................................................................................................................................................................................................................................................................................................................................2450.201010000
....................................................................................................................................................................................................................................................................................................................................TGCC-GATGGCGA----------TGCCAA------------------------TGGCAATG.......................................................2650.201010000
.............................................................................................................................................................................................................................................................................................................................................GCGA----------TGCCAA------------------------TGGCAATGTCGG...................................................2250.201010000
..............................................................ATTGAGTCGATTGATGTCT----------CTGATG.......................................................................................................................................................................................................................................................................................................................................................2550.201010000
..........................GACGACGACGACGACGATGCCGT.......................................................................................................................................................................................................................................................................................................................................................................................................2350.201000001
.............................................CCGTCGACGATATGGACATTGC.....................................................................................................................................................................................................................................................................................................................................................................................2250.201000001
.................................................CGACGATATGGACATTGAGTC..................................................................................................................................................................................................................................................................................................................................................................................2150.201000001
..............................................................................................................................................................................................................................................................................................................................................CGA----------TGCCAA------------------------TGGCAATGTCGGC..................................................2250.201010000
...........................................TGCCGTCGACGATATGGACATTG......................................................................................................................................................................................................................................................................................................................................................................................2350.201010000
........................................................ATGGACATTGAGTCGATTGATGTC........................................................................................................................................................................................................................................................................................................................................................................2450.201010000
..........................................................................................................................................................................................................................................................................................................................................ATGGCGA----------TGCCAA------------------------TGGCAATGTCG....................................................2450.201010000
.......................................................TATGGACATTGAGTCGATTGATGTT........................................................................................................................................................................................................................................................................................................................................................................2550.201010000
........................................CGATGCCGTCGACGATATGGACATTGA.....................................................................................................................................................................................................................................................................................................................................................................................2750.201010000
...........................................................................................................................................................................................................................................................................................................................................................TGCCAA------------------------TGGCAATGTCGGCATCAA---TATC......................................2850.201010000
..............................................................................................................................................................................................................................................................................................................................................................................................ATGTCGGCATCAA---TATCT--------------CTGGTGT................2550.201010000
.......................................ACGATGCCGTCGACGATATGGAC..........................................................................................................................................................................................................................................................................................................................................................................................2350.201010000
.CGACGACGATGACGACGACGA..................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204400000
...............................................................................................................................................................................................................................................................................................................................................................................................TGTCGGCATCAA---TATCT--------------CTGGTGTA...............2550.201010000
...............................................................TTGAGTCGATTGATGTCT----------CTGATGA......................................................................................................................................................................................................................................................................................................................................................2550.201010000
.........................................................................................................................................................................................................................................................................................................................................................................................TGGCAATGTCGGCATCAA---TATCT--------------CAA....................2650.201010000
................................................................................................................................................................................................................................................................................................................................................A----------TGCCAA------------------------TGGCAATGTCGGC..................................................2050.201010000
........................................................................................................................................................................................................................................................................................................................................................................................................CAA---TATCT--------------CTGGTGTTGT--T..........1950.201010000
.............................................CCGTCGACGATATGGACATTGAGTCG.................................................................................................................................................................................................................................................................................................................................................................................2650.201010000
.............................................................CATTGAGTCGATTGATGTCT----------C............................................................................................................................................................................................................................................................................................................................................................2150.201010000
..........................................................................................................................................................................................................................................................................................................................................................................................GGCAATGTCGGCATCAA---TATCT--------------CTG....................2550.201010000
.............................................CCGTCGACGATATGGACATTGAGTC..................................................................................................................................................................................................................................................................................................................................................................................2550.201000001
................................................................................................................................................................................................................................................................................................................................................A----------TGCCAA------------------------TGGCAATGTCGGCA.................................................2150.201100000
.......................................................TATGGACATTGAGTCGATTGA............................................................................................................................................................................................................................................................................................................................................................................2150.201000001
droAna3
GG-----------------------------------------------------------------------------------------------------TCCCTTTTCGTGCGGTCAGCTCCTGC---TCCCGCTCCTGCTCCTGCTCCTGCTCCT------------------------G----CTCGATG------TCCTGGTCAGCGGTGGCGGT------CG----CCGTCCCAGGCACGTTCCATCATGGCGGGCATGTTGTTGGT-CT-TC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTC-TG----------T--GGC--------------------------GCTTC--------------GCCCTGTCGTGACC------C-GSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................GCTCCTGC---TCCCGCTCCTGC........................................................................................................................................................................................................................................................................................................2080.131000001
droBip1
-------------------------------------------------------------------------------------------------------AC-------------------------------------------------------------------------------------CCGATG------TCCTGGTCAGCGGTGGCGGC------GA----CCGTCCCAGGCACGTTCCATCATGGCGGGCATGTTGTTGGT-CT-TC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTC-TG----------T--GGC--------------------------GCTTC--------------GCCCTGTCGTGACC------C-GSizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------------------------------------------------------------------------------------CC--CTTACGTGCGGTCAGCTCCT---GCTCCTAC------------TCGGGCTCCT------------------------G----GTCGATG------TCCTGGTCAGCGG-------------------CGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-GTGGC--------------------------------------GACTACATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTTC--------------GTGCCGTCGTTTCC------CTASizeHit CountTotal NormTotal
No Reads
droFic1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------T--SizeHit CountTotal NormTotal
No Reads
droEle1
ACGACGCCGACGACGACAACGGCGCTGATGTCGATGATGGCGTCGCAGT---------------------------------------------------------------ACTTGGCCAGCTGCCGC---TCCTTCT------------------TCC------------------------G----CTCGTTC------C---------------------------------------------------------------------GCTTCCCTG--------------------------------------GATCGCCTCAAGTGCGGTCC-----------------------------------------------------------------------------------GACGTCCTC------G-GSizeHit CountTotal NormTotal
No Reads
droRho1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG------TCCTGGTCAGCGGCGGCAGCGGCGGCGGCGAACGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC---------SizeHit CountTotal NormTotal
No Reads
droBia1
-------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCTCCGG------------------------CTCCTGATGTCCC----------------G----GCCGATG------TCCTGGTCAGCAGTGGCGGCCGT---GG----CGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--SizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCCGC---TCCT------------------GCTCCT------------------------G----GTCGATG------TCCTGGTCAGCAGAGGCGG-------------CGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGCCC---------SizeHit CountTotal NormTotal
No Reads
droEug1
-------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GCCGATG------TCCTGGTCAGCAGCGGCGGCGGTAACGG----CGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--SizeHit CountTotal NormTotal
No Reads
dm3
-------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GTCGATG------TCCTGGTCAGCGGCGGC----------------GGTCTCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
No Reads
droSim2
-------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GTCGATG------TCCTGGTCAGCGGCGGC----------------GGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
-------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GTCGATG------TCCTGGTCAGCGGCGGC----------------GTTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
-------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GTCGATG------TCCTGGTCAGCGGCAGCGGC---AGCGG----CGGTCCCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGACTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
-------------------------------------------------------------------------------------------------------TCGCTCTACGTGCGGTCAGCTCCT---G------------------------CTCCT------------------------G----GCCGATG------TCCTGGTCAGCGG------------------------CCAGGCACGTTTCATCATGGCCAGCTTGTTGTTGGT-CTGGC--------------------------------------GACTATATCAAATAACGACTATTGGCTACGCCTG-TG----------T--GGC--------------------------GCTCC--------------GTGATGTCGTGTCC------C--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 11:07 PM