ID:

dwi_4150

 Coordinate:

scf2_1100000014723:1156-1306 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-9.4 -9.3 -9.2

Flybase annnotation

CDS [Dwil\GK20273-cds]; exon [dwil_GLEANR_3004:2]; intron [Dwil\GK20273-in]

Repeatable elements

NameClassFamilyStrand
Gypsy-14_DWil-LTRLTRGypsy-
mature
  1. scf2_1100000013363:890-916 -
  2. scf2_1100000008684:435-461 +
  3. dwi_4150  scf2_1100000014723:1157-1183 +
  4. scf2_1100000004958:2018689-2018715 +
  5. scf2_1100000004961:1631116-1631142 +
  6. scf2_1100000004961:1638924-1638950 +
  7. scf2_1100000004967:1031240-1031266 -
  8. scf2_1100000004967:3382969-3382995 +
star
  1. scf2_1100000004960:255811-255831 +
  2. scf2_1100000001859:613-633 -
  3. scf2_1100000014269:45-65 +
  4. scf2_1100000004419:4071-4091 +
  5. dwi_4150  scf2_1100000014723:1225-1245 +
  6. scf2_1100000004536:5257-5277 +
  7. scf2_1100000004536:12188-12208 +
  8. scf2_1100000004538:113058-113078 +
  9. scf2_1100000004569:26632-26652 +
  10. scf2_1100000004632:20614-20634 +
  11. scf2_1100000004943:5158267-5158287 -
  12. scf2_1100000004928:136575-136595 +
  13. scf2_1100000004930:135073-135093 +
  14. scf2_1100000004953:770731-770751 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTGAGACACAACACAAACTTGATTTTGTAACGTTATAAGTTTTATTTAGCTTGTCGCTTGATTTGGTTAGTTCTACGTTTAAACTAAGACCAAGAGGATACAAATAATGTTAATGTTAATGTGCTTAATCGAAAACGGGTGCTCCCAAACCAAATCAGAGGCTTCTGACTACCTTAAATCATCTTATCTATTTTTGAACAGCCTCCGCTTCGAAAGATCTTTCGCCGCTGGACTAAAACTGTAAGTCAAAC
***************************************************....(((((.(((((((((...((((((..(((...(((..................)))...))))))))).)))))))))..)))))*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
...................................................TGTCGCTTGATTTGGTTAGTTCTACGT............................................................................................................................................................................. 27 0 8 3.13 25 17 8 0 0
.........................TGTAACGTTATAAGTTTTATTTAGCT........................................................................................................................................................................................................ 26 0 9 2.67 24 17 7 0 0
......................................................CGCTTGATTTGGTTAGTTCTACGT............................................................................................................................................................................. 24 0 8 1.25 10 6 4 0 0
...................................TAAGTTTTATTTAGCTTGTCGCTTGATT............................................................................................................................................................................................ 28 0 8 1.25 10 9 1 0 0
...................................................TGTCGCTTGATTTGGTTAGTTCTACG.............................................................................................................................................................................. 26 0 8 0.75 6 4 1 1 0
...................TGATTTTGTAACGTTATAAGTTTTATT............................................................................................................................................................................................................. 27 0 8 0.75 6 4 2 0 0
.........................TGTAACGTTATAAGTTTTATTTAGCTTG...................................................................................................................................................................................................... 28 0 9 0.67 6 5 1 0 0
.TGAGACACAACACAAACTTGATTTTG................................................................................................................................................................................................................................ 26 0 8 0.63 5 4 1 0 0
..............................................TAGCTTGTCGCTTGATTTGGTTAGT.................................................................................................................................................................................... 25 0 7 0.57 4 2 1 0 1
.........................TGTAACGTTATAAGTTTTATTTAGC......................................................................................................................................................................................................... 25 0 9 0.56 5 0 5 0 0
...................................TAAGTTTTATTTAGCTTGTCGCTTGA.............................................................................................................................................................................................. 26 0 8 0.50 4 4 0 0 0
.................................TATAAGTTTTATTTAGCTTGTCGCT................................................................................................................................................................................................. 25 0 8 0.50 4 4 0 0 0
.....................................................TCGCTTGATTTGGTTAGTTCTACGT............................................................................................................................................................................. 25 0 8 0.50 4 3 1 0 0
...........................................................................................................................................................................................................TCCGCTTCGAAAGATCTTTCGCCGC....................... 25 0 9 0.44 4 3 1 0 0
...........................TAACGTTATAAGTTTTATTTAGCT........................................................................................................................................................................................................ 24 0 9 0.44 4 4 0 0 0
........................TTGTAACGTTATAAGTTTTATTTAGCT........................................................................................................................................................................................................ 27 0 9 0.44 4 1 3 0 0
..............................................TAGCTTGTCGCTTGATTTGGTTAGTTC.................................................................................................................................................................................. 27 0 7 0.43 3 3 0 0 0
..........................................TATTTAGCTTGTCGCTTGATTTGGT........................................................................................................................................................................................ 25 0 7 0.43 3 2 1 0 0
...................................................TGTCGCTTGATTTGGTTAGTTCTAC............................................................................................................................................................................... 25 0 8 0.38 3 2 1 0 0
...................................TAAGTTTTATTTAGCTTGTCGCT................................................................................................................................................................................................. 23 0 8 0.38 3 2 1 0 0
......................................................CGCTTGATTTGGTTAGTTCTACGTT............................................................................................................................................................................ 25 0 8 0.38 3 1 2 0 0
.......................TTTGTAACGTTATAAGTTTTATTTAGC......................................................................................................................................................................................................... 27 0 9 0.33 3 1 2 0 0
........................................TTTATTTAGCTTGTCGCTTGATTTGGT........................................................................................................................................................................................ 27 0 7 0.29 2 2 0 0 0
..............................................TAGCTTGTCGCTTGATTTGGTTAG..................................................................................................................................................................................... 24 0 7 0.29 2 2 0 0 0
.TGAGACACAACACAAACTTGATTTTGT............................................................................................................................................................................................................................... 27 0 8 0.25 2 0 2 0 0
...................................TAAGTTTTATTTAGCTTGTCGCTTGAT............................................................................................................................................................................................. 27 0 8 0.25 2 2 0 0 0
....GACACAACACAAACTTGATTTTGTAACGT.......................................................................................................................................................................................................................... 29 0 8 0.25 2 2 0 0 0
...........................TAACGTTATAAGTTTTATTTAGCTTG...................................................................................................................................................................................................... 26 0 9 0.22 2 2 0 0 0
.............................................TTAGCTTGTCGCTTGATTTGGTTAGT.................................................................................................................................................................................... 26 0 7 0.14 1 1 0 0 0
..............................................TAGCTTGTCGCTTGATTTGGT........................................................................................................................................................................................ 21 0 7 0.14 1 0 1 0 0
......................TTTTGTAACGTTATAAGTTTTATTTAGCT........................................................................................................................................................................................................ 29 0 7 0.14 1 1 0 0 0
.......................................................................................................................TGTGCTTAATCGAAAACGGGT............................................................................................................... 21 0 14 0.14 2 0 2 0 0
.....................................................................................................................AATGTGCTTAATCGAAAACGGGTGC............................................................................................................. 25 0 14 0.14 2 0 2 0 0
..................................................TTGTCGCTTGATTTGGTTAGTTCTACGT............................................................................................................................................................................. 28 0 8 0.13 1 1 0 0 0
..........................................................TGATTTGGTTAGTTCTACG.............................................................................................................................................................................. 19 0 8 0.13 1 1 0 0 0
..................................................................................................................................................................................................TGAACAGCCTCCGCTTCGAAAGATCTT.............................. 27 0 8 0.13 1 0 1 0 0
...................................................TGTCGCTTGATTTGGTTAGTTCTACGTT............................................................................................................................................................................ 28 0 8 0.13 1 1 0 0 0
...................TGATTTTGTAACGTTATAAGTTTTA............................................................................................................................................................................................................... 25 0 8 0.13 1 1 0 0 0
...................................TAAGTTTTATTTAGCTTGTCGC.................................................................................................................................................................................................. 22 0 8 0.13 1 1 0 0 0
..................................ATAAGTTTTATTTAGCTTGTCGCT................................................................................................................................................................................................. 24 0 8 0.13 1 1 0 0 0
...................................................TGTCGCTTGATTTGGTTAGTTCTA................................................................................................................................................................................ 24 0 8 0.13 1 1 0 0 0
....................GATTTTGTAACGTTATAAGTTTTATT............................................................................................................................................................................................................. 26 0 8 0.13 1 1 0 0 0
.................................................................................................................................................................................................TTCAACAGCCTCCGCTTCGAAAGATC................................ 26 1 8 0.13 1 1 0 0 0
......................................................CGCTTGATTTGGTTAGTTCTACGTTGC.......................................................................................................................................................................... 27 2 8 0.13 1 0 1 0 0
...........................TAACGTTATAAGTTTTATTTAGCTTGT..................................................................................................................................................................................................... 27 0 8 0.13 1 1 0 0 0
...................................................TGTCGCTTGATTTGGTTTGTTC.................................................................................................................................................................................. 22 1 8 0.13 1 1 0 0 0
...................TGATTTTGTAACGTTATAAGTTTTAT.............................................................................................................................................................................................................. 26 0 8 0.13 1 1 0 0 0
.TGAGACGCAACACAAACTTGATTTTG................................................................................................................................................................................................................................ 26 1 8 0.13 1 1 0 0 0
...................................................TGTCGCTTGATTTGGTTAGTTCTAT............................................................................................................................................................................... 25 1 8 0.13 1 0 1 0 0
...................................................TGTCGCTTGATTTGGTTAGTTCT................................................................................................................................................................................. 23 0 8 0.13 1 0 1 0 0
....................................................GTCGCTTGATTTGGTTAGTTCTACGT............................................................................................................................................................................. 26 0 8 0.13 1 1 0 0 0
..............................................................................................................................................TCCCGAACAAAATCAGAGGCTTCTGAC.................................................................................. 27 2 16 0.13 2 2 0 0 0
.....ACACAACACAAACTTGATTTTGTAACGT.......................................................................................................................................................................................................................... 28 0 8 0.13 1 1 0 0 0
.....ACACAACACAAACTTGATTTTGTAACG........................................................................................................................................................................................................................... 27 0 8 0.13 1 1 0 0 0
...................................................................................................................................................................................................CAACAGCCTCCGCTTCGAAAGATCT............................... 25 1 8 0.13 1 1 0 0 0
....................................................GTCGCTTGATCTGGTTAGTTCTACGT............................................................................................................................................................................. 26 1 8 0.13 1 1 0 0 0
..................................................................................................................................................................................................TCAACAGCCTCCGCTTCGAAAGATCT............................... 26 1 8 0.13 1 1 0 0 0
..................................................TTGTCGCTTGATTTGGTTAGTTC.................................................................................................................................................................................. 23 0 8 0.13 1 0 1 0 0
.........................TGTAACGTTATAAGTTTTATTTAGCTT....................................................................................................................................................................................................... 27 0 9 0.11 1 1 0 0 0
.......................TTTGCAACGTTATAAGTTTTATTTAGCT........................................................................................................................................................................................................ 28 1 9 0.11 1 0 1 0 0
..............................................................................................................................................................................................TTTTTGAACAGCCTCCGCTTCGA...................................... 23 0 9 0.11 1 1 0 0 0
...............................................................................................................................................................................................................CTTCGAAAGATCTTTCGCCGCTGGA................... 25 0 10 0.10 1 1 0 0 0
....................................................................................................................................................................................ATCTTATCTATTTTTGAACAGCCTC.............................................. 25 0 10 0.10 1 1 0 0 0
................................................................................................................................................................................................................TTCGAAAGATCTTTCGCCGCTGGAC.................. 25 0 10 0.10 1 1 0 0 0
....................................................................................................................................................................................................................AAAGATCTTTCGCCGCTGGAC.................. 21 0 10 0.10 1 1 0 0 0
.......................................................................................................................................................................................................................GATCTTTCGCCGCTGGACTAA............... 21 0 10 0.10 1 0 1 0 0
......................................................................................................................................................................................................................AGATCTTTCGCCGCTGGACTA................ 21 0 10 0.10 1 0 1 0 0
.......................TTTGTAACGTTATAAGTTTTATT............................................................................................................................................................................................................. 23 0 10 0.10 1 1 0 0 0
GTGAGACACAACACAAACTTGATTT.................................................................................................................................................................................................................................. 25 0 11 0.09 1 1 0 0 0
..................................................................................................................................................................................................................................GCTGGACTAAAACTGTAAGCC.... 21 1 11 0.09 1 1 0 0 0
..............................................................................................................................................TCCCAAACCAAATCAGAGGCTTCT..................................................................................... 24 0 11 0.09 1 0 1 0 0
.................................................................................................................................................CAAACCAAATCAGAGGCTTCTGACTACCT............................................................................. 29 0 11 0.09 1 1 0 0 0
................................................................................................................................................................................................................TTCGAAAGATCTTTCGCCGCT...................... 21 0 11 0.09 1 1 0 0 0
.................................................................................................................................................CAAACCAAATCAGAGGCTTCT..................................................................................... 21 0 11 0.09 1 1 0 0 0
....................................................................................................................................................................................ATCTTATCTATTTTTCAATAGCCT............................................... 24 2 11 0.09 1 1 0 0 0
.................................................................................................................................................................................................................................CGCTGGACTAAAACTGTAAGCCA... 23 1 11 0.09 1 1 0 0 0
.TGAGACACAACACAAACTTGATTT.................................................................................................................................................................................................................................. 24 0 11 0.09 1 1 0 0 0
.......................................................................................................................................CGGGTGCTCCCAAACCAAATCAGAGGCT........................................................................................ 28 0 12 0.08 1 0 1 0 0
.................................................................................................................TGTTAATGTGCTTAATCGAAAACGGG................................................................................................................ 26 0 12 0.08 1 0 1 0 0
...................................................................................................................................................AACCAAATCAGAGGCTTCT..................................................................................... 19 0 13 0.08 1 0 1 0 0
.......................................................................................................................................................................ACTACCTTAAATCATCTTATCTATTT.......................................................... 26 0 13 0.08 1 1 0 0 0
...................................................................................................................................................AACCAAATCAGAGGCTTCTGACTACC.............................................................................. 26 0 13 0.08 1 1 0 0 0
.....................................................................................................................AATGTGCTTAATCGAAAACGGG................................................................................................................ 22 0 14 0.07 1 1 0 0 0
....................................................................................................................TAATGTGCTTAATCAAATACTGG................................................................................................................ 23 3 14 0.07 1 0 1 0 0
......................................................................................................................ATGTGCTTAATCGAAAACGGG................................................................................................................ 21 0 14 0.07 1 0 1 0 0
....................................................................................................................TAATGTGCTTAATCGAAAACGGG................................................................................................................ 23 0 14 0.07 1 0 0 1 0
....................................................................................................................TAATGTGCTTAATCGAAAACGGGTG.............................................................................................................. 25 0 14 0.07 1 1 0 0 0
.................................................................................................................................................................CTTCTGACTACCTTAAATCATCTTA................................................................. 25 0 14 0.07 1 1 0 0 0
.........................................................................................................................TGCTTAATCGAAAACGGGTGC............................................................................................................. 21 0 15 0.07 1 0 1 0 0
..........................................................................................................................GCTTAATCGAAAGCGGGTGCT............................................................................................................ 21 1 15 0.07 1 0 0 1 0
.................................................................................................................................................................CTTCTGACTACCTTAAATCATCTT.................................................................. 24 0 16 0.06 1 0 1 0 0
.............................................................................................................ATAATGTTAATGTGCTTAATC......................................................................................................................... 21 1 16 0.06 1 0 1 0 0
..................................................................................................................................................................TTCTGACTACCTTAAATCATC.................................................................... 21 0 16 0.06 1 1 0 0 0
..........................................................................................................................................................TCAGAGGCTTCTGACTACCTT............................................................................ 21 0 16 0.06 1 1 0 0 0
...........................................ATTGAGATAGTCGCTTGATT............................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 1
...................................................................................................................................................................................................................GAAAGATCTTTCGTCCCT...................... 18 2 20 0.05 1 0 0 0 1
...................................................................................................................................................................................................................GACAGATCTCCCGCCGCTG..................... 19 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

CACTCTGTGTTGTGTTTGAACTAAAACATTGCAATATTCAAAATAAATCGAACAGCGAACTAAACCAATCAAGATGCAAATTTGATTCTGGTTCTCCTATGTTTATTACAATTACAATTACACGAATTAGCTTTTGCCCACGAGGGTTTGGTTTAGTCTCCGAAGACTGATGGAATTTAGTAGAATAGATAAAAACTTGTCGGAGGCGAAGCTTTCTAGAAAGCGGCGACCTGATTTTGACATTCAGTTTG
***************************************************************************************************************....(((((.(((((((((...((((((..(((...(((..................)))...))))))))).)))))))))..)))))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body		 V119
head
 M020
head
.........................................................................................................................................................................................................................AGAAAGCGGCGACCTGATTTTGACAT........ 26 0 9 19.33 174 154 18 0 2 0
.....................................................................CAAGATGGAAATTTGATACGGG................................................................................................................................................................ 22 3 1 8.00 8 0 5 1 1 1
........................................................................................................................................................TTAGTCTCCGAAGACTGATGGAAT........................................................................... 24 0 16 5.19 83 55 28 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGACTGATGGAATT.......................................................................... 25 0 16 4.94 79 52 27 0 0 0
..........................................................................................................................................................................................................................GAAAGCGGCGACCTGATTTTGACAT........ 25 0 9 4.89 44 38 6 0 0 0
.........................................................................................................................................................................................................................AGAAAGCGGCGACCTGATTTTGACATT....... 27 0 9 4.89 44 39 5 0 0 0
..........................................................................................................................................................................................................................GAAAGCGGCGACCTGATTTTGACATT....... 26 0 9 3.33 30 27 2 0 1 0
........................................................................................................................................................TTAGTCTCCGAAGACTGATGGAATTT......................................................................... 26 0 16 2.75 44 37 7 0 0 0
..........................................................................................................................................................AGTCTCCGAAGACTGATGGAATTT......................................................................... 24 0 16 2.50 40 32 8 0 0 0
..........................................................................................................................................................AGTCTCCGAAGACTGATGGAATTTAGT...................................................................... 27 0 16 1.63 26 15 11 0 0 0
........................................................................................................................................................................................................................TAGAAAGCGGCGACCTGATTTTGACAT........ 27 0 9 1.11 10 9 1 0 0 0
.....................................................................CAAGATGGAAATTTGATAC................................................................................................................................................................... 19 2 4 1.00 4 0 2 1 0 1
.......................................................................................................................................................................................................................CTAGAAAGCGGCGACCTGATTTTGACAT........ 28 0 9 0.89 8 2 6 0 0 0
.............................................................................................................................................................................................................GCGAAGCTTTCTAGAAAGCGGCGACCT................... 27 0 9 0.89 8 5 3 0 0 0
..........................................................................................................................................................................................AGATAAAAAGTTATCGGAGGCGAAGCT...................................... 27 2 9 0.89 8 5 3 0 0 0
...........................................................................................................................................................................................GATAAAAAGTTATCGGAGGCGAAGCTT..................................... 27 2 9 0.78 7 6 1 0 0 0
.....................................................................CAAGATGGAAATTTGATACGG................................................................................................................................................................. 21 3 4 0.75 3 0 3 0 0 0
...............................................................................................................................................................................................................GAAGCTTTCTAGAAAGCGGCGACCT................... 25 0 10 0.70 7 4 3 0 0 0
......................................................................................................................TACACGAATTAGCTTTTGCCCACGAGGGT........................................................................................................ 29 0 13 0.46 6 0 6 0 0 0
...........................................................................................................................................................................GGAATTTAGTAGAATAGATAAAAAGT...................................................... 26 1 13 0.46 6 6 0 0 0 0
...............................................................................................................................................................................................................GAAGCTTTCTAGAAAGCGGCGACCTGAT................ 28 0 9 0.44 4 2 2 0 0 0
.........................................................................................................................................................................................................................AGAAAGCGGCGACCTGATTTTGACA......... 25 0 9 0.44 4 3 1 0 0 0
................................................................................................................................................................................................................................GGCGACCTGATTTTGACATTCGGT... 24 1 11 0.36 4 3 1 0 0 0
........................................................................................................................................................................................................................AAGAAAGCGGCGACCTGATTTTGACAT........ 27 1 11 0.36 4 4 0 0 0 0
............................................................................................................................................................................................................................AAGCGGCGACCTGATTTTGACATT....... 24 0 11 0.36 4 4 0 0 0 0
...........................................................................................................................................................................................................................AAAGCGGCGACCTGATTTTGACATT....... 25 0 11 0.36 4 1 3 0 0 0
..............................................................................................................................................................................................................................GCGGCGACCTGATTTTGACATTCAGT... 26 0 11 0.36 4 3 1 0 0 0
..........................................................................................................................................................................................AGATAAAAAGTTATCGGAGGCGAAGCTT..................................... 28 2 9 0.33 3 0 2 1 0 0
..........................................................................................................................................................AGTCTCCGAAGACTGATGGAATTTAG....................................................................... 26 0 16 0.31 5 4 1 0 0 0
.....................................................................................................................................TTGCCCACGAGGGTTTGGTTTAGT.............................................................................................. 24 0 14 0.29 4 1 3 0 0 0
................................................................................................................................................................CGAAGACTGATGGAATTTAGTAGAAT................................................................. 26 0 14 0.29 4 4 0 0 0 0
.............................................................................................................................................................................................................................AGCGGCGACCTGATTTTGACATTCAGT... 27 0 11 0.27 3 3 0 0 0 0
.........................................................................................................................................................TAGTCTCCGAAGACTGATGGAATTTAGT...................................................................... 28 0 16 0.25 4 1 3 0 0 0
.........................................................................................................................................................TAGTCTCCGAAGACTGATGGAATT.......................................................................... 24 0 16 0.25 4 2 2 0 0 0
.........................................................................................................................................................TAGTCTCCGAAGACTGATGGAATTT......................................................................... 25 0 16 0.25 4 1 3 0 0 0
.....................................................................................................................................................................................................TGTCGGAGGCGAAGCTTTCTAGAA.............................. 24 0 8 0.25 2 0 2 0 0 0
.......................................................................................................................................................TTTAGTCTCCGAAGACTGATGGAATT.......................................................................... 26 0 16 0.25 4 1 3 0 0 0
.............................................................................................................................................GAGGGCTTGTTTTAGTCTCCGAAGACT................................................................................... 27 2 16 0.25 4 1 3 0 0 0
..............................................................................................................................................................................................................CGAAGCTTTCTAGAAAGCGGCGACCT................... 26 0 9 0.22 2 1 1 0 0 0
.................................................................................................................................................................................................................AGCTTTCTAGAAAGCGGCGACCTGATT............... 27 0 9 0.22 2 1 1 0 0 0
....................................................................................................................................................................................................................TTTCTAGAAAGCGGCGACCTGATTT.............. 25 0 9 0.22 2 0 2 0 0 0
........................................................................................................................................................................................................................TAGAAAGCGGCGACCTGATTTTGACATT....... 28 0 9 0.22 2 0 1 1 0 0
.................................................................................................................................................................................................................AGCTTTCTAGAAAGCGGCGACCTGAT................ 26 0 9 0.22 2 2 0 0 0 0
..........................................................................................................................................................................................AGATAAAAAGTTATCGGAGGCGAAGC....................................... 26 2 9 0.22 2 2 0 0 0 0
..........................................................................................................................................................................................................................GAAAGCGGCGACCTGATTTTGACA......... 24 0 9 0.22 2 0 2 0 0 0
..........................................................................................................................................................................................AGATAAAAACTTGTCGGAGGCGAAGCTT..................................... 28 0 9 0.22 2 0 2 0 0 0
................................................................................................................................................................................................................AAGCTTTCTAGAAAGCGGCGACCTGAT................ 27 0 9 0.22 2 1 1 0 0 0
.....................................................................CAAGATGGAAATTTGATA.................................................................................................................................................................... 18 2 14 0.21 3 0 3 0 0 0
..........................................................................................................TACAATTACAATTACACGAATTAGCTTT..................................................................................................................... 28 0 14 0.21 3 0 3 0 0 0
..........................................................................................................TACAATTACAATTACACGAATTAGCTT...................................................................................................................... 27 0 15 0.20 3 0 3 0 0 0
......................................................................AAGATGGAAATTTGATACGG................................................................................................................................................................. 20 3 20 0.20 4 0 4 0 0 0
.............................................................................................................................................................CTCCGAAGACTGATGGAATTTAGT...................................................................... 24 0 16 0.19 3 1 2 0 0 0
..............................................................................................................................................AGGGCTTGTTTTAGTCTCCGAAGACT................................................................................... 26 2 16 0.19 3 2 1 0 0 0
..........................................................................................................TACAATTACAATTACACGAATTAGCT....................................................................................................................... 26 0 16 0.19 3 0 3 0 0 0
..........................................................................................................................................................AGTCTCCGAAGACTGATGGAATT.......................................................................... 23 0 16 0.19 3 2 1 0 0 0
............................................................................................................................................................................................................................AAGCGGCGACCTGATTTTGACAT........ 23 0 11 0.18 2 2 0 0 0 0
.............................................................................................................................................................................................................................AGCGGCGACCTGATTTTGACATT....... 23 0 11 0.18 2 2 0 0 0 0
................................................................................................................................................GGTTTGGTTTAGTCTCCGAAGACT................................................................................... 24 0 11 0.18 2 0 2 0 0 0
..............................................................................................................................................................................................................................GCGGCGACCTGATTTTGACATTCGGT... 26 1 11 0.18 2 2 0 0 0 0
...........................................................................................................................................................................................................................AAAGCGGCGACCTGATTTTGACAT........ 24 0 11 0.18 2 1 1 0 0 0
...................................................................................................................................................TTGGTTTAGTCTCCGAAGACTGAT................................................................................ 24 0 13 0.15 2 0 2 0 0 0
...............................................................................................................................................................CCGAAGACTGATGGAATTTAGTAGAAT................................................................. 27 0 14 0.14 2 0 2 0 0 0
..................................................................................................................................CTTTTGCCCACGAGGGTTTGGT................................................................................................... 22 0 14 0.14 2 0 2 0 0 0
.............................................................................................................TATTACAATTACACGAATTAGTTTAT.................................................................................................................... 26 3 15 0.13 2 0 2 0 0 0
.....................................................................................................................................................................ACTGATGGAATTTAGTAGAATAGAT............................................................. 25 0 15 0.13 2 2 0 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGACTGATGGAA............................................................................ 23 0 16 0.13 2 1 1 0 0 0
.........................................................................................................................................................................................................GGAGGCGAAGCTTTCTAGAAA............................. 21 0 8 0.13 1 1 0 0 0 0
........................................................................................................................................................................................................CGGAGGCGAAGCTTTCTAGAAAGCG.......................... 25 0 8 0.13 1 0 1 0 0 0
......................................................................................................................................................................................................GTCGGAGGCGAAGCTTTCTAGAAAG............................ 25 0 8 0.13 1 0 1 0 0 0
.....................................................AGCGAACTAAACCAATCAAGATGC.............................................................................................................................................................................. 24 0 8 0.13 1 0 1 0 0 0
..........TGTGTTTGAACTAAAACATTGCAAT........................................................................................................................................................................................................................ 25 0 8 0.13 1 0 1 0 0 0
...............................................................................................................................................................................................AAAACTTGTCGGAGGCGAAGATTTCTA................................. 27 1 8 0.13 1 1 0 0 0 0
.......................................................................................................................................................................................................TCGGAGGCGAAGCTTTCTAGAAAG............................ 24 0 8 0.13 1 0 1 0 0 0
.....................................................................................................................................................................................................TATCGGAGGCGAAGCTTTCTAGAAA............................. 25 1 8 0.13 1 0 1 0 0 0
............................................................................................................................................................TCTCCGAAGACTGATGGAATTTAGT...................................................................... 25 0 16 0.13 2 1 1 0 0 0
..................................................................................................................................................................................................AGTTATCGGAGGCGAAGCTTTCTAG................................ 25 2 8 0.13 1 1 0 0 0 0
............TGTTTGAACTAAAACATTGCAAT........................................................................................................................................................................................................................ 23 0 8 0.13 1 0 1 0 0 0
.............................TGCAATATTCAAAATAAATCGAACAG.................................................................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0
.....................................................................................................................................................................................................TATCGGAGGCGAAGCTTTCTAGAAAGC........................... 27 1 8 0.13 1 0 1 0 0 0
.........................................................................................................................................................................................................GGAGGCGAAGCTTTCTAGAAAGCGGC........................ 26 0 8 0.13 1 0 1 0 0 0
.....................................................................................................................................................................................................TGTCGGAGGCGAAGCTTTCTAGAAAG............................ 26 0 8 0.13 1 0 1 0 0 0
.................................................................................................................................................................................................TAGTTGTCGGAGGCGAAGCTTTCTAG................................ 26 2 8 0.13 1 1 0 0 0 0
...............................................................................................................................................GGGCTTGTTTTAGTCTCCGAAGACT................................................................................... 25 2 16 0.13 2 1 1 0 0 0
.......................................................................................................................................................TTTAGTCTCCGAAGACTGATGGAAT........................................................................... 25 0 16 0.13 2 1 1 0 0 0
.................................................GAACAGCGAACTAAACCAATCAAG.................................................................................................................................................................................. 24 0 8 0.13 1 0 1 0 0 0
........................................................................................................................................................................................................CGGAGGCGAAGCTTTCTAGAAAGCGG......................... 26 0 8 0.13 1 1 0 0 0 0
.....................................................................................................................................................................................................TGTCGGAGGCGAAGCTTTCTAGAAA............................. 25 0 8 0.13 1 0 1 0 0 0
.........................................................................................................................................................................................TAGATAAAAAGTTATCGGAGGCGAAGCT...................................... 28 2 8 0.13 1 0 1 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGAATGATGGAATT.......................................................................... 25 1 16 0.13 2 2 0 0 0 0
......................................................................................................TTATTACAATTACAATTACACGAAT............................................................................................................................ 25 0 17 0.12 2 1 1 0 0 0
..........................................................................................................................................................................................................................GAAATCGGCGACCTGATTTTGACATT....... 26 1 9 0.11 1 1 0 0 0 0
............................................................................................................................................................................................ATAAAAAGTTATCGGAGGCGAAGCT...................................... 25 2 9 0.11 1 0 1 0 0 0
..........................................................................................................................................................................................AGATAAAAAGTTGTCGGAGGCGAAGCT...................................... 27 1 9 0.11 1 0 0 1 0 0
.............................................................................................................................................................................................TAAAAACTTGTCGGAGGCGAAGCTT..................................... 25 0 9 0.11 1 0 1 0 0 0
..........................................................................................................................................................................................AGATAAAAAATTATCGGAGGCGAAGCT...................................... 27 2 9 0.11 1 1 0 0 0 0
...........................................................................................................................................................................................GATAAAAAGTTGTCGGAGGCGAAGCTT..................................... 27 1 9 0.11 1 1 0 0 0 0
..................................................................................................................................................................................................................GCTTTCTAGAAAGCGGCGACCTGATT............... 26 0 9 0.11 1 1 0 0 0 0
..........................................................................................................................................................................................................................GAAAGCGGCGACCTAATTTTGACATT....... 26 1 9 0.11 1 1 0 0 0 0
.....................................................................CAAGATGGAAATTTGATACG.................................................................................................................................................................. 20 3 9 0.11 1 0 0 0 1 0
.......................................................................................................................................................................................................................CTAGAAAGCGGCGACCTGATTTTGACATT....... 29 0 9 0.11 1 0 0 1 0 0
....................................................................................................................................................................................................................TTTCTAGAAAGCGGCGACCTGAT................ 23 0 9 0.11 1 0 1 0 0 0
.........................................................................................................................................................................................................................AGAAAGCGGCTACCTGATTTTGACATT....... 27 1 9 0.11 1 0 1 0 0 0
.........................................................................................................................................................................................................................AGAAAGCGGAGACCTGATTTTGACAT........ 26 1 9 0.11 1 1 0 0 0 0
.........................................................................................................................................................................................................................AGAAAGCGGCGAACTGATTTTGACAT........ 26 1 9 0.11 1 1 0 0 0 0
.........................................................................................................................................................................................................................TGAAAGCGGCGACCTGATTTTGACAT........ 26 1 9 0.11 1 1 0 0 0 0
..............................................................................................................................................................................................AAAAAGTTATCGGAGGCGAAGCT...................................... 23 2 9 0.11 1 0 1 0 0 0
.........................................................................................................................................................................................................................AGAAATCGGCGACCTGATTTTGACAT........ 26 1 9 0.11 1 1 0 0 0 0
....................................................................................................................................................................................................................TTTCTAGAAAGCGGCGACCTGATT............... 24 0 9 0.11 1 0 1 0 0 0
..........................................................................................................................................................................................................................GAAAGCGGCCACCTGATTTTGACAT........ 25 1 9 0.11 1 1 0 0 0 0
............................................................................................................................................................................................................GGCGAAGCTTTCTAGAAAGC........................... 20 0 9 0.11 1 1 0 0 0 0
..........................................................................................................................................................................................................................GAAAGCGGCTACCTGATTTTGACAT........ 25 1 9 0.11 1 1 0 0 0 0
..........................................................................................................................................................................................AGATAAAAACTTGTCGGAGGCGAAGC....................................... 26 0 9 0.11 1 0 1 0 0 0
............................................................................................................................................................................................................GGCGAAGCTTTCTAGAAAGCG.......................... 21 0 9 0.11 1 0 1 0 0 0
.........................................................................................................................................................................................................................AGAAAGCGGCTACCTGATTTTGACAT........ 26 1 9 0.11 1 1 0 0 0 0
.........................................................................................................................................................................................................................AGCAAGCGGCGACCTGATTTTGACAT........ 26 1 9 0.11 1 1 0 0 0 0
.............................................................................................................................................................................................TAAAAAGTTATCGGAGGCGAAGC....................................... 23 2 9 0.11 1 0 1 0 0 0
.........................................................................................................................................................................................................................AGAAAGCGGCGACCTGATCTTGACAT........ 26 1 9 0.11 1 1 0 0 0 0
......................................................................................................................................................................................................................TCTAGAAAGCGGCGACCTGATTTTGACAT........ 29 0 9 0.11 1 0 1 0 0 0
.........................................................................................................................................................................................................................AGAAAGCGGCGACTTGATTTTGACAT........ 26 1 9 0.11 1 1 0 0 0 0
......................................................................................................................................................................................................................TCTAGAAAGCGGCGACCTGATTTTGACA......... 28 0 9 0.11 1 0 1 0 0 0
..............................................................................................................................................................................................................CGAACCTTTCTAGAAAGCGGCGACCT................... 26 1 9 0.11 1 1 0 0 0 0
..........................................................................................................................................................................................................................GAAAGCGGCGACCTGATTTTG............ 21 0 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................................................................................AGAAAGCGGCGACCTGATTTTG............ 22 0 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................................................................................AGAAAGCGGCGACCTGATTTTGA........... 23 0 10 0.10 1 1 0 0 0 0
........................................................................................................................................................................................................................TTGAAAGCGGCGACCTGATTTTGA........... 24 1 10 0.10 1 1 0 0 0 0
..................................................................................................................................................................................................................................CGACCTGATTTTGACATT....... 18 0 11 0.09 1 0 1 0 0 0
.............................................................................................................................................................................................................................AGCGGCGACCTGATTTTGACAT........ 22 0 11 0.09 1 1 0 0 0 0
........................................................................................................................CACGAATTAGTTTATGCCCACGAGGGCT....................................................................................................... 28 3 11 0.09 1 0 1 0 0 0
................................................................................................................................................................................................................................GGCGACCTGATTTTGACATTC...... 21 0 11 0.09 1 1 0 0 0 0
..................................................................................................................................................................................AGTAGAATAGATAAAAACTTGTCGG................................................ 25 0 11 0.09 1 1 0 0 0 0
................................................................................................................................................................................................................................GGCGACCTGATTTTGACATTCAGT... 24 0 11 0.09 1 1 0 0 0 0
................................................................................................................................................................................................................................GGCGACCTGATTTTGACATTCGG.... 23 1 11 0.09 1 0 1 0 0 0
........................................................................................................................................................................................................................AAGAAAGCGGCGACCTGATTTTGACATT....... 28 1 11 0.09 1 0 1 0 0 0
..........................................................................................................................................................................................................................AGAAGCGGCGACCTGATTTTGACAT........ 25 2 11 0.09 1 1 0 0 0 0
........................................................................................................................................................................................................................AAGAGAGCGGCGACCTGATTTTGACAT........ 27 2 11 0.09 1 1 0 0 0 0
............................................................................................................................................................................................................................AAGCGGCGGCCTGATTTTGACAT........ 23 1 11 0.09 1 1 0 0 0 0
...............................................................................................................................................................................................................................CGGCGACCTGATTTTGACATTCGGT... 25 1 11 0.09 1 0 1 0 0 0
..............................................................................................................................................AGGGTTTGGTTTAGTCTCCGAAGAT.................................................................................... 25 1 11 0.09 1 1 0 0 0 0
.............................................................................................................................................................................................................................TGCGGCGACCTGATTTTGACATTCGGT... 27 2 11 0.09 1 1 0 0 0 0
..............................................................................................................................................AGGGTTTGGTTTAGTCTCCGAAGACT................................................................................... 26 0 11 0.09 1 1 0 0 0 0
..............................................................................................................................................AGGGTTTGGTTTAGTCTCCGAAGAC.................................................................................... 25 0 11 0.09 1 1 0 0 0 0
................................................................CCAATCAAGATGCAGATTTGATTCT.................................................................................................................................................................. 25 1 11 0.09 1 0 0 0 0 1
................................................................................................................................................................................TTAGTAGAATAGATAAAAACTTGT................................................... 24 0 12 0.08 1 1 0 0 0 0
................................................................................................................................................................................TTAGTAGAATAGATAAAAAGTTGT................................................... 24 1 12 0.08 1 1 0 0 0 0
................................................................................................................................................GTTTTGGTTTAGTCTCCGAAGACTGATG............................................................................... 28 1 12 0.08 1 0 1 0 0 0
.................................................................................................................ACAATTACACGAATTAGTTTATGACCAC.............................................................................................................. 28 3 12 0.08 1 1 0 0 0 0
...........................................................................................................................................................................................................................AAAGCGGCGACCTGATTTTGA........... 21 0 12 0.08 1 1 0 0 0 0
...............................................................................................................................TAGCTTTTGCCCACGAGGGTTTGGTT.................................................................................................. 26 0 12 0.08 1 0 1 0 0 0
.........................................................................................................................ACGAATTAGCTTTTGCCCACGAGGGTTT...................................................................................................... 28 0 12 0.08 1 0 1 0 0 0
...............................................................................................................................TAGCTTTTGCCCACGAGGGTTTGG.................................................................................................... 24 0 12 0.08 1 0 1 0 0 0
................................................................................................................................................................................TTAGTAGAATAGATAAAAAGTTAT................................................... 24 2 12 0.08 1 1 0 0 0 0
..........................................................................................................................CGAATTAGCTTTTGCCCACGAGGGTT....................................................................................................... 26 0 12 0.08 1 1 0 0 0 0
..............................................................................................................................................AGGGTTTGGTTTAGTCTCCGAAG...................................................................................... 23 0 12 0.08 1 1 0 0 0 0
.........................................................................................................................ACGAATTAGCTTTTGCCCACGAGGGTT....................................................................................................... 27 0 12 0.08 1 0 1 0 0 0
............................................................................................................................GAATAGCTTTTGCCCACGAGGGTTTGGT................................................................................................... 28 2 12 0.08 1 0 1 0 0 0
.................................................................................................................................................................................TAGTAGAATAGATAAAAAGTTAT................................................... 23 2 12 0.08 1 1 0 0 0 0
.............................................................................................................................GTTAGCTTTTGCCCACGAGGGTTTGGT................................................................................................... 27 1 12 0.08 1 0 1 0 0 0
.......................................................................................................................ACACGAATTAGCTTTTGCCCACGAGGGT........................................................................................................ 28 0 13 0.08 1 1 0 0 0 0
............................................................................................................................................................................GAATTTAGTAGAATAGATAAAAACT...................................................... 25 0 13 0.08 1 1 0 0 0 0
........................................................................................................................CACGAATTAGCTTTTGCCCACGAGGGT........................................................................................................ 27 0 13 0.08 1 1 0 0 0 0
...........................................................................................................................................................................GGAATTTAGTAGAATAGATAAAAAC....................................................... 25 0 13 0.08 1 1 0 0 0 0
...................................................................................................................................................TTGGTTTAGTCTCCGAAGACTGATG............................................................................... 25 0 13 0.08 1 0 1 0 0 0
..........................................................................................................................CGAATTAGCTTTTGCCCACGAGGGT........................................................................................................ 25 0 14 0.07 1 1 0 0 0 0
...................................................................................................................................................................AGACTGATGGAATTTAGTAGAATAGAT............................................................. 27 0 14 0.07 1 0 1 0 0 0
................................................................................................................................AGCTTTTGCCCACGAGGGTTTGGTTT................................................................................................. 26 0 14 0.07 1 1 0 0 0 0
...................................................................................................................................AATTGCCCACGAGGGTTTGGTTTAGTCT............................................................................................ 28 2 14 0.07 1 1 0 0 0 0
....................................................................................................................................TTTGCCCACGAGGGTTTGGTTTAGT.............................................................................................. 25 0 14 0.07 1 1 0 0 0 0
................................................................................................................................AGCTTTTGCCCACGAGGGTTTGGT................................................................................................... 24 0 14 0.07 1 0 1 0 0 0
....................................................................................................................................TTTGACCACGAGGGTTTGGTTTAGT.............................................................................................. 25 1 14 0.07 1 1 0 0 0 0
.....................................................................................................................................TTGCCCACGAGGGTTTGGTTTAGTCT............................................................................................ 26 0 14 0.07 1 0 1 0 0 0
.................................................................................................................................GCTTTTGCCCACGAGGGTTTGGTTT................................................................................................. 25 0 14 0.07 1 0 1 0 0 0
.....................................................................................................................TTACACGAATTAGTTTATGACCAC.............................................................................................................. 24 3 14 0.07 1 1 0 0 0 0
......................................................................................................................................TGCCCACGAGGGTTTGGTTTAGT.............................................................................................. 23 0 14 0.07 1 0 1 0 0 0
..................................................................................................................................CTTTTGCCCACGAGGGTTTGGTTTAG............................................................................................... 26 0 14 0.07 1 1 0 0 0 0
................................................................................................................................AGCTTTTGCCCACGAGGGTTTGGTT.................................................................................................. 25 0 14 0.07 1 0 1 0 0 0
..........................................................................................................TACAATTACAATTACACGAATTAGCTTTT.................................................................................................................... 29 0 14 0.07 1 0 1 0 0 0
................................................................................................................TACAATTACACGAATTAGTTTATGAC................................................................................................................. 26 3 14 0.07 1 1 0 0 0 0
.................................................................................................................................GCTTTTGCCCACGAGGGTTTGGT................................................................................................... 23 0 14 0.07 1 0 1 0 0 0
................................................................................................................................................................CGAAGACTGATGGAATTTAGTAGAATA................................................................ 27 0 14 0.07 1 1 0 0 0 0
................................................................................................................................AGCTTTTGCCCACGAGGGTTTGG.................................................................................................... 23 0 14 0.07 1 0 1 0 0 0
...........................................................................................................ACAATTACAATTACACGAATTAGCTT...................................................................................................................... 26 0 15 0.07 1 1 0 0 0 0
.......................................................................................................TATTACAATTACAATTACACGAATT........................................................................................................................... 25 0 15 0.07 1 0 1 0 0 0
.......................................................................................................................................................................TGATGGAATTTAGTAGAATAGAT............................................................. 23 0 15 0.07 1 1 0 0 0 0
.................GAAGTAAAACATTTCAATAT...................................................................................................................................................................................................................... 20 2 15 0.07 1 0 0 0 0 1
..................................................................................................................CAATTACACGAATTAGTTTATGAC................................................................................................................. 24 3 15 0.07 1 1 0 0 0 0
...............................................................................................................................................GGGCTTGTTTTAGTCTCCGAAGACTGAT................................................................................ 28 2 15 0.07 1 0 1 0 0 0
......................................................................................................................................................ATTTAGTCTCCGAAGACTGATGGAATT.......................................................................... 27 1 16 0.06 1 0 1 0 0 0
......................................................................................................................................................ATTTAGTCTCCGAAGACCGATGGAATTT......................................................................... 28 2 16 0.06 1 0 1 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGACTGATGTAATTT......................................................................... 26 1 16 0.06 1 1 0 0 0 0
......................................................................................................................................................AGATAGTCTCCGAAGACTGATGGAATTT......................................................................... 28 3 16 0.06 1 0 1 0 0 0
................................................................................................................................................................CGAAGACTGATGGAATTTAGT...................................................................... 21 0 16 0.06 1 0 1 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGGCTGATGGAATT.......................................................................... 25 1 16 0.06 1 0 1 0 0 0
..........................................................................................................................................................AGTCTCCGAAGACTGATGGAATTTC........................................................................ 25 1 16 0.06 1 1 0 0 0 0
.............................................................................................................................................................CTCCGAAGACTGATGGAATTTAGTAG.................................................................... 26 0 16 0.06 1 0 1 0 0 0
............................................................................................................................................................TCTCCGAAGACTGATGGAATTTAGTA..................................................................... 26 0 16 0.06 1 1 0 0 0 0
........................................................................................................................................................TTAGCCTCCGAAGACTGATGGAATTT......................................................................... 26 1 16 0.06 1 1 0 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGACTGGTGGAAT........................................................................... 24 1 16 0.06 1 1 0 0 0 0
...........................................................................................................................................................GTCTCCGAAGACTGATGGAATTTAGT...................................................................... 26 0 16 0.06 1 0 1 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGACTGATGGAATC.......................................................................... 25 1 16 0.06 1 1 0 0 0 0
................................................................................................................................................................CGAAGACTTATGGAATTTAGTAG.................................................................... 23 1 16 0.06 1 1 0 0 0 0
..........................................................................................................................................................AGTCTCCAAAGACTGATGGAATTTAG....................................................................... 26 1 16 0.06 1 1 0 0 0 0
..........................................................................................................................................................AGTCTCCGAAGACTGATGGAATTTA........................................................................ 25 0 16 0.06 1 1 0 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGACTGATGGAATTTAG....................................................................... 28 0 16 0.06 1 0 1 0 0 0
..............................................................................................................................................................TCCGAAGACTGATGGAATTTAGTAGA................................................................... 26 0 16 0.06 1 0 1 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGACTGATAGAAT........................................................................... 24 1 16 0.06 1 1 0 0 0 0
..........................................................................................................................................................AGTCTCCCAAGACTGATGGAATTTAGT...................................................................... 27 1 16 0.06 1 0 1 0 0 0
.............................................................................................................................................GAGGGCTTGTTTTAGTCTCCGAAGA..................................................................................... 25 2 16 0.06 1 1 0 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGACTGAGGGAATT.......................................................................... 25 1 16 0.06 1 1 0 0 0 0
..........................................................................................................................................................AGTCTCCGAAGACTGATGGAATTTGGT...................................................................... 27 1 16 0.06 1 1 0 0 0 0
........................................................................................................................................................TTAGTCTCCGAAGACTGATGGAATTC......................................................................... 26 1 16 0.06 1 1 0 0 0 0
............................................................................................................................................................TCTCCGAAGACTGATGGAATTTAG....................................................................... 24 0 16 0.06 1 0 1 0 0 0
.......................................................................................................TATTACAATTACAATTACACGAA............................................................................................................................. 23 0 17 0.06 1 0 1 0 0 0
..................................................................................................................................................................................................................GCTTTCTAGAAAGCAGCCA...................... 19 2 20 0.05 1 0 0 0 1 0
.......................................................................................................................................................................................................................CTCGAAAGCGGCGAAGTGA................. 19 3 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000014723:1106-1356 + dwi_4150 GTGAGACACAACACAAACTTGATTTTGTAACGTTATAAGTTTTATTTAGCTTGTCGCTTGATTTGGTTAGTTCTACGTTTAAACTAAGACCAAGAGGATACAAATAATGTTAATGTTAATGTGCTTAATCGAAAACGGGTGCTCCCAAACCAAATCAGAGGCTTCTGACTACCTTAAATCATCTTATCTATTTTTGAACAGCCTCCGCTTCGAAAGATCTTTCGCCGCTGGACTAAAACTGTAAGTCAAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GTGAGACACAACACAAACTTGATTTTGTAACGTTATAAGTTTTATTTAGCTTGTCGCTTGATTTGGTTAGTTCTACGTTTAAACTAAGACCAAGAGGATACAAATAATGTTAATGTTAATGTGCTTAATCGAAAACGGGTGCTCCCAAACCAAATCAGAGGCTTCTGACTACCTTAAATCATCTTATCTATTTTTGAACAGCCTCCGCTTCGAAAGATCTTTCGCCGCTGGACTAAAACTGTAAGTCAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................TGTCGCTTGATTTGGTTAGTTCTACGT.............................................................................................................................................................................2783.1325017080
.........................TGTAACGTTATAAGTTTTATTTAGCT........................................................................................................................................................................................................2692.6724017070
......................................................CGCTTGATTTGGTTAGTTCTACGT.............................................................................................................................................................................2481.251006040
...................................TAAGTTTTATTTAGCTTGTCGCTTGATT............................................................................................................................................................................................2881.251009010
...................................................TGTCGCTTGATTTGGTTAGTTCTACG..............................................................................................................................................................................2680.75604110
...................TGATTTTGTAACGTTATAAGTTTTATT.............................................................................................................................................................................................................2780.75604020
.........................TGTAACGTTATAAGTTTTATTTAGCTTG......................................................................................................................................................................................................2890.67605010
.TGAGACACAACACAAACTTGATTTTG................................................................................................................................................................................................................................2680.63504010
..............................................TAGCTTGTCGCTTGATTTGGTTAGT....................................................................................................................................................................................2570.57412010
.........................TGTAACGTTATAAGTTTTATTTAGC.........................................................................................................................................................................................................2590.56500050
...................................TAAGTTTTATTTAGCTTGTCGCTTGA..............................................................................................................................................................................................2680.50404000
.................................TATAAGTTTTATTTAGCTTGTCGCT.................................................................................................................................................................................................2580.50404000
.....................................................TCGCTTGATTTGGTTAGTTCTACGT.............................................................................................................................................................................2580.50403010
...........................................................................................................................................................................................................TCCGCTTCGAAAGATCTTTCGCCGC.......................2590.44403010
...........................TAACGTTATAAGTTTTATTTAGCT........................................................................................................................................................................................................2490.44404000
........................TTGTAACGTTATAAGTTTTATTTAGCT........................................................................................................................................................................................................2790.44401030
..............................................TAGCTTGTCGCTTGATTTGGTTAGTTC..................................................................................................................................................................................2770.43303000
..........................................TATTTAGCTTGTCGCTTGATTTGGT........................................................................................................................................................................................2570.43302010
...................................................TGTCGCTTGATTTGGTTAGTTCTAC...............................................................................................................................................................................2580.38302010
...................................TAAGTTTTATTTAGCTTGTCGCT.................................................................................................................................................................................................2380.38302010
......................................................CGCTTGATTTGGTTAGTTCTACGTT............................................................................................................................................................................2580.38301020
.......................TTTGTAACGTTATAAGTTTTATTTAGC.........................................................................................................................................................................................................2790.33301020
........................................TTTATTTAGCTTGTCGCTTGATTTGGT........................................................................................................................................................................................2770.29202000
..............................................TAGCTTGTCGCTTGATTTGGTTAG.....................................................................................................................................................................................2470.29202000
.TGAGACACAACACAAACTTGATTTTGT...............................................................................................................................................................................................................................2780.25200020
...................................TAAGTTTTATTTAGCTTGTCGCTTGAT.............................................................................................................................................................................................2780.25202000
....GACACAACACAAACTTGATTTTGTAACGT..........................................................................................................................................................................................................................2980.25202000
...........................TAACGTTATAAGTTTTATTTAGCTTG......................................................................................................................................................................................................2690.22202000
.............................................TTAGCTTGTCGCTTGATTTGGTTAGT....................................................................................................................................................................................2670.14101000
..............................................TAGCTTGTCGCTTGATTTGGT........................................................................................................................................................................................2170.14100010
......................TTTTGTAACGTTATAAGTTTTATTTAGCT........................................................................................................................................................................................................2970.14101000
.......................................................................................................................TGTGCTTAATCGAAAACGGGT...............................................................................................................21140.14200020
.....................................................................................................................AATGTGCTTAATCGAAAACGGGTGC.............................................................................................................25140.14200020
..................................................TTGTCGCTTGATTTGGTTAGTTCTACGT.............................................................................................................................................................................2880.13101000
..........................................................TGATTTGGTTAGTTCTACG..............................................................................................................................................................................1980.13101000
..................................................................................................................................................................................................TGAACAGCCTCCGCTTCGAAAGATCTT..............................2780.13100010
...................................................TGTCGCTTGATTTGGTTAGTTCTACGTT............................................................................................................................................................................2880.13101000
...................TGATTTTGTAACGTTATAAGTTTTA...............................................................................................................................................................................................................2580.13101000
...................................TAAGTTTTATTTAGCTTGTCGC..................................................................................................................................................................................................2280.13101000
..................................ATAAGTTTTATTTAGCTTGTCGCT.................................................................................................................................................................................................2480.13101000
...................................................TGTCGCTTGATTTGGTTAGTTCTA................................................................................................................................................................................2480.13101000
....................GATTTTGTAACGTTATAAGTTTTATT.............................................................................................................................................................................................................2680.13101000
......................................................CGCTTGATTTGGTTAGTTCTACGTTGC..........................................................................................................................................................................2780.13100010
...........................TAACGTTATAAGTTTTATTTAGCTTGT.....................................................................................................................................................................................................2780.13101000
...................TGATTTTGTAACGTTATAAGTTTTAT..............................................................................................................................................................................................................2680.13101000
...................................................TGTCGCTTGATTTGGTTAGTTCTAT...............................................................................................................................................................................2580.13100010
...................................................TGTCGCTTGATTTGGTTAGTTCT.................................................................................................................................................................................2380.13100010
....................................................GTCGCTTGATTTGGTTAGTTCTACGT.............................................................................................................................................................................2680.13101000
.....ACACAACACAAACTTGATTTTGTAACGT..........................................................................................................................................................................................................................2880.13101000
.....ACACAACACAAACTTGATTTTGTAACG...........................................................................................................................................................................................................................2780.13101000
..................................................TTGTCGCTTGATTTGGTTAGTTC..................................................................................................................................................................................2380.13100010
.........................TGTAACGTTATAAGTTTTATTTAGCTT.......................................................................................................................................................................................................2790.11101000
..............................................................................................................................................................................................TTTTTGAACAGCCTCCGCTTCGA......................................2390.11101000
...............................................................................................................................................................................................................CTTCGAAAGATCTTTCGCCGCTGGA...................25100.10101000
....................................................................................................................................................................................ATCTTATCTATTTTTGAACAGCCTC..............................................25100.10101000
................................................................................................................................................................................................................TTCGAAAGATCTTTCGCCGCTGGAC..................25100.10101000
....................................................................................................................................................................................................................AAAGATCTTTCGCCGCTGGAC..................21100.10101000
.......................................................................................................................................................................................................................GATCTTTCGCCGCTGGACTAA...............21100.10100010
......................................................................................................................................................................................................................AGATCTTTCGCCGCTGGACTA................21100.10100010
.......................TTTGTAACGTTATAAGTTTTATT.............................................................................................................................................................................................................23100.10101000
GTGAGACACAACACAAACTTGATTT..................................................................................................................................................................................................................................25110.09101000
..............................................................................................................................................TCCCAAACCAAATCAGAGGCTTCT.....................................................................................24110.09100010
.................................................................................................................................................CAAACCAAATCAGAGGCTTCTGACTACCT.............................................................................29110.09101000
................................................................................................................................................................................................................TTCGAAAGATCTTTCGCCGCT......................21110.09101000
.................................................................................................................................................CAAACCAAATCAGAGGCTTCT.....................................................................................21110.09101000
.TGAGACACAACACAAACTTGATTT..................................................................................................................................................................................................................................24110.09101000
.......................................................................................................................................CGGGTGCTCCCAAACCAAATCAGAGGCT........................................................................................28120.08100010
.................................................................................................................TGTTAATGTGCTTAATCGAAAACGGG................................................................................................................26120.08100010
...................................................................................................................................................AACCAAATCAGAGGCTTCT.....................................................................................19130.08100010
.......................................................................................................................................................................ACTACCTTAAATCATCTTATCTATTT..........................................................26130.08101000
...................................................................................................................................................AACCAAATCAGAGGCTTCTGACTACC..............................................................................26130.08101000
.....................................................................................................................AATGTGCTTAATCGAAAACGGG................................................................................................................22140.07101000
......................................................................................................................ATGTGCTTAATCGAAAACGGG................................................................................................................21140.07100010
....................................................................................................................TAATGTGCTTAATCGAAAACGGG................................................................................................................23140.07100100
....................................................................................................................TAATGTGCTTAATCGAAAACGGGTG..............................................................................................................25140.07101000
.................................................................................................................................................................CTTCTGACTACCTTAAATCATCTTA.................................................................25140.07101000
.........................................................................................................................TGCTTAATCGAAAACGGGTGC.............................................................................................................21150.07100010
.................................................................................................................................................................CTTCTGACTACCTTAAATCATCTT..................................................................24160.06100010
..................................................................................................................................................................TTCTGACTACCTTAAATCATC....................................................................21160.06101000
..........................................................................................................................................................TCAGAGGCTTCTGACTACCTT............................................................................21160.06101000

Generated: 05/18/2015 at 09:52 AM