ID:

dwi_4142

 Coordinate:

scf2_1100000008840:800-999 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.1 -17.0 -16.9

Flybase annnotation

CDS [Dwil\GK20163-cds]; exon [dwil_GLEANR_2756:1]; exon [dwil_GLEANR_2756:2]; CDS [Dwil\GK20163-cds]; intron [Dwil\GK20163-in]

No Repeatable elements found

mature
  1. dwi_4142  scf2_1100000008840:897-919 -
  2. scf2_1100000004585:381865-381887 +
  3. scf2_1100000004902:4657432-4657454 +
star
  1. dwi_4142  scf2_1100000008840:802-825 -
  2. scf2_1100000004585:381959-381982 +
  3. scf2_1100000004585:6248300-6248323 +

Sense Strand Reads

------------------------##########################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCGATAGTGACTATCGGTGCTTCAATGAGTTTGAGTGCAAATAGACACGTGTAAGTGAAAAAGTGTTAACTTTTTGGTACATTTTTATTAATAAACATTTATCCTCCACTTTTTAGTCAATGAATATTGAAGTATTAGTATATGGATGGCAGTTCCTCATTCAAAATGGACAGATTTGTGGCTAAAACAAGTAAGTGTTTTTATACAAAGTATGTAAAATGTGTATCTAATATATTTGATCACTTTTTAGAAAAAGATTGTACTTTGTCTTCTTCTCCTTCTACATCGACTGCAACTGCA
**********************************************************************************************************************************.((((((((((((((((((.......)))))))......(((..((((((...((((((......))))))..))))))...)))......)))).)))))))...............**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body
..................................................................................................................................AGTATTAGTATATGGATGGCAGT................................................................................................................................................... 23 0 3 1.00 3 3 0 0
.....................................................................................................................................ATTAGTATATGGATGGCAGTTC................................................................................................................................................. 22 0 3 1.00 3 2 1 0
..............................................................................................................................................................................................................................................................................TCTTCTCCTTCTACATCGACTGCAAC.... 26 0 2 1.00 2 2 0 0
...................................................................................................................................................................................................................................................................................TCCTTCTACATCGACTGCAACTG.. 23 0 2 1.00 2 2 0 0
........................ATGAGTTTGAGTGCAAATAGACACG........................................................................................................................................................................................................................................................... 25 0 4 0.75 3 2 1 0
.......................................................................................................................................TAGTATATGGATGGCAGTTCCTCA............................................................................................................................................. 24 0 3 0.67 2 2 0 0
....................................................................................................................................TATTAGTATATGGATGGCAGTTCC................................................................................................................................................ 24 0 3 0.67 2 2 0 0
....................................................................................................................................TATTAGTATATGGATGGCAGTTCCT............................................................................................................................................... 25 0 3 0.67 2 2 0 0
....................................................................................................................................TATTAGTATATGGATGGCAGTTC................................................................................................................................................. 23 0 3 0.67 2 2 0 0
.................................................................................................................................................................................................................................................................................TCTCCTTCTACATCGACTGCAAC.... 23 0 2 0.50 1 1 0 0
...................................................................................................................................................................................................................................................................................TCCTTCTACATCGACTGCAACTGCA 25 0 2 0.50 1 1 0 0
.............................TTTGAGTGCAAATAGACACGTGTAAGT.................................................................................................................................................................................................................................................... 27 0 4 0.50 2 0 1 1
............................................................................................................................................................TCATTCAAAATGGACAGATTTGTGG....................................................................................................................... 25 0 2 0.50 1 1 0 0
..........................................................................................................................................................................................................................................................................GTCTTCTTCTCCTTCTACATCGAC.......... 24 0 2 0.50 1 1 0 0
...........................................................................................................................................................CTCATTCAAAATGGACAGATTTGTGGC...................................................................................................................... 27 0 2 0.50 1 0 1 0
..........................................................................................................................................................CCTCATTCAAAATGGACAGATTTGT......................................................................................................................... 25 0 2 0.50 1 1 0 0
...................................................................................................................................................................................................................................................................................TCCTTCTACATCGACTGCAACTGC. 24 0 2 0.50 1 1 0 0
.....................................................................................................................................................................................................................................................................................ATTCTACATCGACTGCAACTGCA 23 1 2 0.50 1 1 0 0
.................................................................................................................................................................................................................................................................................TCTCCTTCTACATCGACTGCAACTG.. 25 0 2 0.50 1 1 0 0
.................................................................................................................................................................................................................................................................................TCTCCTTCTACATCGACTGCAACTGCA 27 0 2 0.50 1 1 0 0
..................................................................................................................................AGTATTAGTATATGGATGGCAGTTCC................................................................................................................................................ 26 0 3 0.33 1 1 0 0
...................................................................................................................................GTATTAGTATATGGATGGCAGTTCCT............................................................................................................................................... 26 0 3 0.33 1 0 1 0
...............................................................................................................................TGAAGTATTAGTATATGGATGGCAGTTC................................................................................................................................................. 28 0 3 0.33 1 1 0 0
...............................................................................................................................TGAAGTATTAGTATATGGATGGCA..................................................................................................................................................... 24 0 3 0.33 1 1 0 0
.....................................................................................................................................ATTAGTATATGGATGGCAGTTCCT............................................................................................................................................... 24 0 3 0.33 1 0 1 0
.....................................................................................................................................ATTAGTATATGGATGGCAGTTCCTCA............................................................................................................................................. 26 0 3 0.33 1 0 1 0
.....................................................................................................................................ATTAGTATATGGATGGCAGTTCC................................................................................................................................................ 23 0 3 0.33 1 1 0 0
................................................................................................................................................................................................................................ATCTAATATATTTGATCACTTTTT.................................................... 24 0 3 0.33 1 1 0 0
.....................................................................................................................................ATTAGTATATGGATGGCAGTTCCTCAT............................................................................................................................................ 27 0 3 0.33 1 1 0 0
.....................................................................................................................................ATTAGTATATGGATGGCAGTTCCTC.............................................................................................................................................. 25 0 3 0.33 1 0 1 0
..................................................................................................................................AGTATTAGTATATGGATGGCAG.................................................................................................................................................... 22 0 3 0.33 1 1 0 0
...................................................................................................................................GTATTAGTATATGGATGGCAGTTC................................................................................................................................................. 24 0 3 0.33 1 1 0 0
..................................................................................................................................AGTATTAGTATATGGATGGCAGTT.................................................................................................................................................. 24 0 3 0.33 1 1 0 0
...........TATCGGTGCTTCAATGAGTTTGAG......................................................................................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0
................................GAGTGCAAATAGACACGTGTAAG..................................................................................................................................................................................................................................................... 23 0 4 0.25 1 0 1 0
...ATAGTGACTATCGGTGCTTCAATG................................................................................................................................................................................................................................................................................. 24 0 4 0.25 1 0 0 1
....................TTCAATGAGTTTGAGTGCA..................................................................................................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0
..................GCTTCAATGAGTTTGAGTGCAAATAGA............................................................................................................................................................................................................................................................... 27 0 4 0.25 1 1 0 0
...........................................................................................................................................ATATGGATGGCAGTTCCT............................................................................................................................................... 18 0 4 0.25 1 0 1 0
........................ATGAGTTTGAGTGCAAATAGACAC............................................................................................................................................................................................................................................................ 24 0 4 0.25 1 1 0 0
................................GAGTGCAAATATACACGTGTAAGTG................................................................................................................................................................................................................................................... 25 1 4 0.25 1 0 1 0
.....................TCAATGAGTTTGAGTGCAAATAGA............................................................................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0
...........................................................................................................................................ATATGGATGGCAGTTCCTCA............................................................................................................................................. 20 0 4 0.25 1 0 1 0
..........CTATCGGTGCTTCAATGAG............................................................................................................................................................................................................................................................................... 19 0 4 0.25 1 0 1 0
.....................................................................................TATTAATAAACATTTATCCTCCAC............................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0
...........................................................................................TAAACATTTATCCTCCACTTTTTAGT....................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0
............................................ACCCGTGTAAGTAAAAAATT............................................................................................................................................................................................................................................ 20 3 20 0.20 4 3 0 1
............................................ACCCGTGTAAGTAAAAAATTG........................................................................................................................................................................................................................................... 21 3 7 0.14 1 1 0 0
...............................................CGCGTGAGTGAAAAAGGGT.......................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0

Anti-sense strand reads

AGCTATCACTGATAGCCACGAAGTTACTCAAACTCACGTTTATCTGTGCACATTCACTTTTTCACAATTGAAAAACCATGTAAAAATAATTATTTGTAAATAGGAGGTGAAAAATCAGTTACTTATAACTTCATAATCATATACCTACCGTCAAGGAGTAAGTTTTACCTGTCTAAACACCGATTTTGTTCATTCACAAAAATATGTTTCATACATTTTACACATAGATTATATAAACTAGTGAAAAATCTTTTTCTAACATGAAACAGAAGAAGAGGAAGATGTAGCTGACGTTGACGT
****************************************************.((((((((((((((((((.......)))))))......(((..((((((...((((((......))))))..))))))...)))......)))).)))))))...............********************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
..................................................................................................................................................................................................................................................................................GAGGAAGATGTAGCTGACGTTGACGT 26 0 2 15.50 31 6 24 1 0
...TATCACTGATAGCCACGAAGTTACT................................................................................................................................................................................................................................................................................ 25 0 4 14.25 57 11 46 0 0
..........................................................................................TATTTGTAAATAGGAGGTGAAAAAT......................................................................................................................................................................................... 25 0 4 14.00 56 6 47 3 0
...................................................................................................................................................................................................................................................................................AGGAAGATGTAGCTGACGTTGACGT 25 0 2 13.00 26 4 21 0 1
.............AGCCACGAAGTTACTCAAACTCACGT..................................................................................................................................................................................................................................................................... 26 0 4 8.75 35 35 0 0 0
....................................................................................................................................................................................................................................................................................GGAAGATGTAGCTGACGTTGACGT 24 0 2 7.50 15 9 6 0 0
.....................................................................................................................................................................................................................................................................................GAAGATGTAGCTGACGTTGACGT 23 0 2 3.50 7 2 5 0 0
............................................................................................................................................ATACCTACCGTCAAGGAGTAAGTTT....................................................................................................................................... 25 0 4 3.50 14 8 5 0 1
.................................................................................................................................................................................................................................................................................AGAGGAAGATGTAGCTGACGTTGACGT 27 0 2 3.00 6 4 2 0 0
..................................................................................................................................................ACCGTCAAGGAGTAAGTTTTACCTGT................................................................................................................................ 26 0 3 3.00 9 5 4 0 0
...........................................................................................................................................................................................................................................................................AGAAGAAGAGGAAGATGTAGCTGACGT...... 27 0 2 2.50 5 0 3 2 0
...........................................................................................................................................................................................................................................................................AGAAGAAGAGGAAGATGTAGCT........... 22 0 2 2.50 5 3 1 1 0
......CACTGATAGCCACGAAGTTACTCAAACT.......................................................................................................................................................................................................................................................................... 28 0 4 2.25 9 9 0 0 0
.........................................................................................................................................................................................................................................................................ACAGAAGAAGAGGAAGATGTAGCT........... 24 0 2 2.00 4 4 0 0 0
.............................................................................................................................................................................................................................................................................AAGAAGAGGAAGATGTAGCTGACGT...... 25 0 2 2.00 4 3 1 0 0
............................................................................................................................................................................................................................................................................GAAGAAGAGGAAGATGTAGCTGACGT...... 26 0 2 2.00 4 2 2 0 0
.................................TCACGTTTATCTGTGCACATTCACTT................................................................................................................................................................................................................................................. 26 0 4 2.00 8 6 2 0 0
..................................................................................................................................................................................................................................................................................GAGGAAGATGTAGCTGACGTTGACG. 25 0 2 1.50 3 3 0 0 0
......................................................................................................................................................................................................................................................................................AAGATGTAGCTGACGTTGACGT 22 0 2 1.50 3 0 3 0 0
..............................................................................................................................................................................................................................................................................AGAAGAGGAAGATGTAGCTGACGT...... 24 0 2 1.50 3 2 1 0 0
...................................................................................................................................................................................................................................................................................AGGAAGATGTAGCTGACGTTGACG. 24 0 2 1.50 3 2 1 0 0
............................................................................................................................................................................................................TGTTTCATACATTTTACACATAGAT....................................................................... 25 0 3 1.33 4 2 2 0 0
.GCTATCACTGATAGCCACGAAGTTACT................................................................................................................................................................................................................................................................................ 27 0 4 1.25 5 3 2 0 0
..................................CACGTTTATCTGTGCACATTCACTT................................................................................................................................................................................................................................................. 25 0 4 1.25 5 4 1 0 0
.........TGATAGCCACGAAGTTACTCAAACT.......................................................................................................................................................................................................................................................................... 25 0 4 1.25 5 4 1 0 0
...........................................CTGTGCACATTCACTTTTTCACAAT........................................................................................................................................................................................................................................ 25 0 4 1.00 4 4 0 0 0
.......ACTGATAGCCACGAAGTTACTCAAACT.......................................................................................................................................................................................................................................................................... 27 0 4 1.00 4 4 0 0 0
.............AGCCACGAAGTTACTCAAACTCACGTT.................................................................................................................................................................................................................................................................... 27 0 4 1.00 4 4 0 0 0
...........................................................................................................................................................................................................ATGTTTCATACATTTTACACATAGAT....................................................................... 26 0 3 1.00 3 3 0 0 0
...............................................................................................................................................................................................................................................................................GAAGAGGAAGATGTAGCTGACGT...... 23 0 2 1.00 2 0 2 0 0
.............................................................................................................................................................................................................GTTTCATACATTTTACACATAGATTAT.................................................................... 27 0 3 1.00 3 3 0 0 0
.................................TCACGTTTATCTGTGCACATTCACT.................................................................................................................................................................................................................................................. 25 0 4 1.00 4 4 0 0 0
..............GCCACGAAGTTACTCAAACTCACGT..................................................................................................................................................................................................................................................................... 25 0 4 1.00 4 4 0 0 0
.............................................................................................................................................................................................TCATTCACAAAAATATGTTTCATACAT.................................................................................... 27 0 3 1.00 3 3 0 0 0
.................................................................................................................................................................................................................................................................................TGAGGAAGATGTAGCTGACGTTGACGT 27 1 2 1.00 2 0 0 2 0
....ATCACTGATAGCCACGAAGTTACTCA.............................................................................................................................................................................................................................................................................. 26 0 4 0.75 3 2 1 0 0
..................................CACGTTTATCTGTGCACATTCACTTT................................................................................................................................................................................................................................................ 26 0 4 0.75 3 3 0 0 0
.........................................................................................................................................CATATACCTACCGTCAAGGAGTAAGT......................................................................................................................................... 26 0 4 0.75 3 3 0 0 0
.............................................................................................................................................TACCTACCGTCAAGGAGTAAGTTT....................................................................................................................................... 24 0 4 0.75 3 3 0 0 0
..........GATAGCCACGAAGTTACTCAAACT.......................................................................................................................................................................................................................................................................... 24 0 4 0.75 3 2 1 0 0
..............................................................................................................................................ACCTACCGTCAAGGAGTAAGT......................................................................................................................................... 21 0 4 0.75 3 3 0 0 0
.............................................................TCACAATTGAAAAACCATGTAAAAAT..................................................................................................................................................................................................................... 26 0 4 0.75 3 1 2 0 0
...............................................................................................................................................CCTACCGTCAAGGAGTAAGTTT....................................................................................................................................... 22 0 4 0.75 3 0 3 0 0
....ATCACTGATAGCCACGAAGTTACT................................................................................................................................................................................................................................................................................ 24 0 4 0.75 3 2 1 0 0
..........................................................................................................................................ATATACCTACCGTCAAGGAGTAAGTTT....................................................................................................................................... 27 0 4 0.75 3 2 1 0 0
.........................................................................................................................................CATATACCTACCGTCAAGGAGTAAGTTT....................................................................................................................................... 28 0 4 0.75 3 2 1 0 0
..............................................................................................................................................................................................CATTCACAAAAATATGTTTCATACAT.................................................................................... 26 0 3 0.67 2 2 0 0 0
............................................................................................................................................................................................TTCATTCACAAAAATATGTTTCAT........................................................................................ 24 0 3 0.67 2 2 0 0 0
.......................................................................................................................................................................................................AAATATGTTTCATACATTTTACACAT........................................................................... 26 0 3 0.67 2 2 0 0 0
...........................................................................................................................................................................................GTTCATTCACAAAAATATGTTTCATACAT.................................................................................... 29 0 3 0.67 2 2 0 0 0
.................................TCACGTTTATCTGTGCACATTCACTTTT............................................................................................................................................................................................................................................... 28 0 4 0.50 2 2 0 0 0
.................................................................................................................................................................................................................................................................................AGAGGAAGATGTAGCTGACGTTGAC.. 25 0 2 0.50 1 0 1 0 0
......CACTGATAGCCACGAAGTTACTCAAAC........................................................................................................................................................................................................................................................................... 27 0 4 0.50 2 1 1 0 0
.................................................................................................................................................................................................................................................................................AGAGAAAGATGTAGCTGACGTTGACGT 27 1 2 0.50 1 0 1 0 0
..................................CACGTTTATCTGTGCACATTCACTTTT............................................................................................................................................................................................................................................... 27 0 4 0.50 2 2 0 0 0
...................................................................................................................................................................................................................................................................................AGGAAGATGTAGCTGACGTTGAC.. 23 0 2 0.50 1 0 1 0 0
..........................................................................................................................................................................................................................................................................CAGAAGAAGAGGAAGATGTAGC............ 22 0 2 0.50 1 0 1 0 0
...........................................................................................................................................................GAGTAAGTTTTACCTGTCTAAACACC....................................................................................................................... 26 0 2 0.50 1 1 0 0 0
...TATCACTGATAGCCACGAAGTTAC................................................................................................................................................................................................................................................................................. 24 0 4 0.50 2 2 0 0 0
.......................................................................................AATTATTTGTAAATAGGAGGTGAAAAAT......................................................................................................................................................................................... 28 0 4 0.50 2 2 0 0 0
.................................................................................AAAAATAATTATTTGTAAATAGGAGGT................................................................................................................................................................................................ 27 0 4 0.50 2 0 1 1 0
..................................................................................................................................................................................................................................................................................GAGGAAGATTTAGCTGACGTTGACGT 26 1 2 0.50 1 0 1 0 0
..........GATAGCCACGAAGTTACTCAAACTCACGT..................................................................................................................................................................................................................................................................... 29 0 4 0.50 2 2 0 0 0
...................................................................................................................................................................................................................................................................................AGGAAGATGTAGCTGACGTTGACAT 25 1 2 0.50 1 0 1 0 0
.............................................................................................TTGTAAATAGGAGGTGAAAAATCAGT..................................................................................................................................................................................... 26 0 4 0.50 2 1 0 1 0
......................................................................................................................................................................................................................................................................GAAACAGAAGAAGAGGAAGATGTAGC............ 26 0 2 0.50 1 1 0 0 0
..................................................................................................................................................................................................................................................................................GAGGAAGATGTAGCTGACGTTGAC.. 24 0 2 0.50 1 0 1 0 0
...................................................................................................................................................................................................................................................................................AGGAAGATGCAGCTGACGTTGACGT 25 1 2 0.50 1 0 1 0 0
................................................................................................................................................................................................................................................................................ATATGGAAGATGTAGCTGACGTTGACGT 28 3 2 0.50 1 1 0 0 0
................................................................................................................................................................................................................................................................................AAGAGGAAGATGTAGCTGACGTTGACGT 28 0 2 0.50 1 0 0 1 0
....................................................................................................................................................................................................................................................................................GGAAGATGTAGCGGACGTTGACGT 24 1 2 0.50 1 1 0 0 0
...TATCACTGATAGCCAAGAAGTTACT................................................................................................................................................................................................................................................................................ 25 1 4 0.50 2 0 2 0 0
...................................................................................................................................................................................................................................................................................AGGAAGATGTATCTGACGTTGACGT 25 1 2 0.50 1 0 1 0 0
.........................................................................................................................................................AGGAGTAAGTTTTACCTGTCTAAA........................................................................................................................... 24 0 2 0.50 1 1 0 0 0
...........................................................TTTCACAATTGAAAAACCATGTAAAAAT..................................................................................................................................................................................................................... 28 0 4 0.50 2 2 0 0 0
...................................................................................................................................................................TTTACCTGTCTAAACACCGAT.................................................................................................................... 21 0 2 0.50 1 1 0 0 0
...............................................................................................................................................................................................................................................................................GACTAGGAAGATGTAGCTGACGTTGACGT 29 2 2 0.50 1 0 0 1 0
........................................................................................................................................................................................................................................................................AACAGAAGAAGAGGAAGATGT............... 21 0 2 0.50 1 1 0 0 0
................................................................................................................................................................................................................................................................................AAGAGGAAGATGTAGCTGACGTTGAC.. 26 0 2 0.50 1 0 1 0 0
..................................................................................................................................................................................................................................................................................GAGGAATATGTAGCTGACGTTGACGT 26 1 2 0.50 1 0 1 0 0
..............................................................................................TGTAAATAGGAGGTGAAAAATCAGT..................................................................................................................................................................................... 25 0 4 0.50 2 1 1 0 0
...............................................................................................................................................................................................................................................................................GAAGAGGAAGATGTAGCTGACGTTGA... 26 0 2 0.50 1 1 0 0 0
..............................................................................................................................................ACCTACCGTCAAGGAGTAAGTTT....................................................................................................................................... 23 0 4 0.50 2 1 1 0 0
.....................................................................................................................................................................................................................................TATATAAACTAGTGAAAAATCTTTTTC............................................ 27 0 2 0.50 1 1 0 0 0
...........................................................................................................................................................................................................................................................................AGAAGAAGAGGAAGATGTAGCTGACG....... 26 0 2 0.50 1 1 0 0 0
.............AGCCACGAAGTTACTCAAACTCACGTTT................................................................................................................................................................................................................................................................... 28 0 4 0.50 2 2 0 0 0
...........................................................................................................................................................................................................................................................................AGAAGAAGAGGAAGATGTAGCTGA......... 24 0 2 0.50 1 0 1 0 0
...............................................................................................................................................CCTACCGTCAAGGAGTAAGT......................................................................................................................................... 20 0 4 0.50 2 0 2 0 0
..........................................................................................TATTTGTAAATAGGAGGTGAAAA........................................................................................................................................................................................... 23 0 4 0.50 2 0 2 0 0
............................................................................................................................................................................................................................................................................GAAGAAGAGGAAGATTTAGCTGACGT...... 26 1 2 0.50 1 0 1 0 0
..................................................................................................................................................................................................................................................................................TAGGAAGATGTAGCTGACGTTGACGT 26 1 2 0.50 1 0 1 0 0
......................................................................................................................................................................................................................................................................GAAACAGAAGAAGAGGAAGATGTAGCT........... 27 0 2 0.50 1 1 0 0 0
................................................................................................................................................................................................................................................................................AAGAGGAAGATGTAGCTGACGT...... 22 0 2 0.50 1 1 0 0 0
.................ACGAAGTTACTCAAACTCACGTTTAT................................................................................................................................................................................................................................................................. 26 0 4 0.50 2 2 0 0 0
................................................................................................................................................................................................................................................................................GATAGGAAGATGTAGCTGACGTTGACGT 28 2 2 0.50 1 0 0 1 0
...............................................................................................................................................CCTACCGTCAAGGAGTAAGTTTTACC................................................................................................................................... 26 0 3 0.33 1 1 0 0 0
..........................................................................................................................TTATAACTTCATAATCATATACCTAC........................................................................................................................................................ 26 0 3 0.33 1 1 0 0 0
..................................................................................................................................TCATAATCATATACCTACCGTCAAGGAG.............................................................................................................................................. 28 0 3 0.33 1 1 0 0 0
..........................................................................................................................................................................................................TATGTTTCATACATTTTACACATAGAT....................................................................... 27 0 3 0.33 1 1 0 0 0
...................................................................................................................................CATAATCATATACCTACCGTCAAGGAGT............................................................................................................................................. 28 0 3 0.33 1 1 0 0 0
................................................................................................................................................................................................................TCATACATTTTACACATAGATTAT.................................................................... 24 0 3 0.33 1 0 1 0 0
...................................................................................................................................................CCGTCAAGGAGTAAGTTTTACCT.................................................................................................................................. 23 0 3 0.33 1 0 1 0 0
..........................................................................................................................................................................................TGTTCATTCACAAAAATATGTTTCAT........................................................................................ 26 0 3 0.33 1 0 1 0 0
..................................................................................................................................TCATAATCATATACCTACCGTCAAGGAGT............................................................................................................................................. 29 0 3 0.33 1 1 0 0 0
...............................................................................................................................................................................................................TTCATACATTTTACACATAGATTAT.................................................................... 25 0 3 0.33 1 0 1 0 0
.....................................................................................................................................................................................................AAAAATATGTTTCATACATTTTACACAT........................................................................... 28 0 3 0.33 1 1 0 0 0
.....................................................................................................................................TAATCATATACCTACCGTCAAGGAGT............................................................................................................................................. 26 0 3 0.33 1 1 0 0 0
........................................................................................................................................................................................................AATATGTTTCATACATTTTACACATAGAT....................................................................... 29 0 3 0.33 1 1 0 0 0
...................................................................................................................................................CCGTCAAGGAGTAAGTTTTACCTGTCT.............................................................................................................................. 27 0 3 0.33 1 1 0 0 0
...........................................................................................................................................................................................GTTCATTCACAAAAATATGTTTCATACA..................................................................................... 28 0 3 0.33 1 1 0 0 0
...............................................................................................................................................................................................................TTCATACATTTTACACATAGATTATA................................................................... 26 0 3 0.33 1 0 1 0 0
...............................................................................................................................................................................................................................ATAGATTATATAAACTAGTGAAAAAT................................................... 26 0 3 0.33 1 0 1 0 0
..........................................................................................................................................TTATACCTACCGTCAAGGAGTAAGTTT....................................................................................................................................... 27 1 4 0.25 1 0 0 1 0
............................................................................................TATCTAAATAGGAGGCGAAAAAT......................................................................................................................................................................................... 23 3 4 0.25 1 0 1 0 0
.............AGCCACGAAGTTACTCAAACTCACGTTA................................................................................................................................................................................................................................................................... 28 1 4 0.25 1 1 0 0 0
AGCTATCACTGATAGCCACGAAGTTACT................................................................................................................................................................................................................................................................................ 28 0 4 0.25 1 1 0 0 0
...........ATAGCCACGAAGTTACTCAAACTCACGT..................................................................................................................................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0
..........................................................................................TACTTGTAAATAGGAGGTGAAAAAT......................................................................................................................................................................................... 25 1 4 0.25 1 0 1 0 0
...........................................CTGTGCACATTCACTTTTTCACAATT....................................................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0
...TATCACTGATAGCCACGAAGTTATT................................................................................................................................................................................................................................................................................ 25 1 4 0.25 1 0 1 0 0
..................................CACGTTTATCTGTGCACATTCACT.................................................................................................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0
..................................CACGTTTATCTGTGCACATTCACTTTC............................................................................................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0
..............GCCACGAAGTTACTCAAACTCACGTT.................................................................................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0
...............................................GCACATTCACTTTTTCACAATTGAAA................................................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0
................................CTCACGTTTATCTGTGCACATTCACTT................................................................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0
...............................ACTCACGTTTATCTGTGCACATTCACTT................................................................................................................................................................................................................................................. 28 0 4 0.25 1 1 0 0 0
.............................................................TCACAATTGAAAAACCATGTAAAAA...................................................................................................................................................................................................................... 25 0 4 0.25 1 0 1 0 0
........CTGATAGCCACGAAGTTACTCAAACT.......................................................................................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0
..........GATAGCCACGAAGTTACTCAAACTCAC....................................................................................................................................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0
............................CAAACTCACGTTTATCTGTGCACAT....................................................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0
..........................................................................................TATTTGTAAATAGGAGGAGAAAAAT......................................................................................................................................................................................... 25 1 4 0.25 1 0 1 0 0
...TATCACTGATAGCCACGAAATTACT................................................................................................................................................................................................................................................................................ 25 1 4 0.25 1 0 1 0 0
............................................................................................................................................ATACCTACCGTCAAGGAGTAAGT......................................................................................................................................... 23 0 4 0.25 1 0 1 0 0
.........................................................................................................................................CATATACCTACCGTCAAGGAGTAAG.......................................................................................................................................... 25 0 4 0.25 1 1 0 0 0
............................................................................................................................................ATACCTACCGTCAAGGAGTAAGTTTT...................................................................................................................................... 26 0 4 0.25 1 1 0 0 0
...TATCACTGATAGCCACGGAGTTACT................................................................................................................................................................................................................................................................................ 25 1 4 0.25 1 0 1 0 0
....ATCACTGATAGCCACGAAGTTACTCAAAC........................................................................................................................................................................................................................................................................... 29 0 4 0.25 1 1 0 0 0
.........................................ATCTGTGCACATTCACTTTTTCACAAT........................................................................................................................................................................................................................................ 27 0 4 0.25 1 0 1 0 0
..........................................TCTGTGCACATTCACTTTTTCACAAT........................................................................................................................................................................................................................................ 26 0 4 0.25 1 0 1 0 0
......TGCTGATAGCCACGAAGTTACTCAAACT.......................................................................................................................................................................................................................................................................... 28 2 4 0.25 1 1 0 0 0
...........................................................TTTCACAATTGAAAAACCATGTAAAAATC.................................................................................................................................................................................................................... 29 1 4 0.25 1 1 0 0 0
...............................ACTCACGTTTATCTGTGCACATTCACT.................................................................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0
........................TACTCAAACTCACGTTTGTCTGTGCACAT....................................................................................................................................................................................................................................................... 29 1 4 0.25 1 1 0 0 0
...............................................................................................GTAAATAGGAGGTGAAAAATCAGT..................................................................................................................................................................................... 24 0 4 0.25 1 0 1 0 0
...TATCACTGATAGCCACGAAGTTACTCA.............................................................................................................................................................................................................................................................................. 27 0 4 0.25 1 0 1 0 0
...............................................................................................GTAAATAGGAGGTGAAAAAT......................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0
............................................................................................................................................ATACCTACAGTCAAGGAGTAAGTTT....................................................................................................................................... 25 1 4 0.25 1 0 1 0 0
.................................TCACGTTTATCTGTGCACATTCACTTT................................................................................................................................................................................................................................................ 27 0 4 0.25 1 1 0 0 0
.............................................................................................................................................TACCTACCGTCAAGGAGTAAGTT........................................................................................................................................ 23 0 4 0.25 1 1 0 0 0
...TATCACCGATAGCCACGAAGTTACT................................................................................................................................................................................................................................................................................ 25 1 4 0.25 1 0 1 0 0
.........................................................................................CTATTTGTAAATAGGAGGTGAAAAAT......................................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0
.............................................................TCACAATTGAAAAACCATGTAAAAATAAT.................................................................................................................................................................................................................. 29 0 4 0.25 1 1 0 0 0
............................................................................................................................................ATACCTACCGTCAAGGAGTAAGTT........................................................................................................................................ 24 0 4 0.25 1 0 1 0 0
.........................................................................................ATATTTGTAAATAGGAGGTGAAAAAT......................................................................................................................................................................................... 26 1 4 0.25 1 0 1 0 0
AGCTATCACTGATAGCCACGAAGTT................................................................................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0
..........................................................................................TATTTGTAAATATGAGGTGAAAAAT......................................................................................................................................................................................... 25 1 4 0.25 1 0 1 0 0
...................................ACGTTTATCTGTGCACATTCACTT................................................................................................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0
...........................................................................................ATTTGTAAATAGGAGGTGAAAAAT......................................................................................................................................................................................... 24 0 4 0.25 1 0 1 0 0
.....................................................TCACTTTTTCACAATTGAAAAACCATGT........................................................................................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0
..................................CACGTTTATCTGTGCACATTCACTTCT............................................................................................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0
...TATCACTGATAGCCATGAAGTTACTCA.............................................................................................................................................................................................................................................................................. 27 1 4 0.25 1 0 1 0 0
.......ACTGATAGCCACGAAGTTACTCAA............................................................................................................................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0
..................................................................................................AATAGGAGGTGAAAAATCAGTTAG.................................................................................................................................................................................. 24 1 4 0.25 1 1 0 0 0
................................CTCACGTTTATCTGTGCA.......................................................................................................................................................................................................................................................... 18 0 4 0.25 1 1 0 0 0
...............CCACGAAGTTACTCAAACTCACGT..................................................................................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0
AGCTATCACTGATAGCCACGAAGTTAC................................................................................................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0
.........................................................................................................................................CATATACCTACCGTCAAGGAGTAAGTT........................................................................................................................................ 27 0 4 0.25 1 1 0 0 0
...TATCACTGATAGCCACGAGGTTACT................................................................................................................................................................................................................................................................................ 25 1 4 0.25 1 0 1 0 0
........................................TATCTGTGCACATTCACTTTTTCAC........................................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0
............................................................................................................................................ATACCTACCGTCAAGGAGTAAG.......................................................................................................................................... 22 0 4 0.25 1 1 0 0 0
..................................................................................................................................................ACCGTCAAGGAGTAAGTTTTA..................................................................................................................................... 21 0 4 0.25 1 1 0 0 0
................CACGAAGTTACTCAAACTCACGTTTAT................................................................................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0
...TATCAATGATAGCCACGAAGTTACT................................................................................................................................................................................................................................................................................ 25 1 4 0.25 1 0 1 0 0
............................................................................................................................................ATACCTACCGTCAAAGAGTAAGTTT....................................................................................................................................... 25 1 4 0.25 1 1 0 0 0
..........................................................................................TATTTGTAAATAGGAGGTGAAAAA.......................................................................................................................................................................................... 24 0 4 0.25 1 0 1 0 0
.........TGATAGCCACGAAGTTACTCAAAC........................................................................................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0
............................................................................................TTTGTAAATAGGAGGTGAAAAATCAGT..................................................................................................................................................................................... 27 0 4 0.25 1 0 1 0 0
...........................................................TTTCACAATTGAAAAACCATG............................................................................................................................................................................................................................ 21 0 4 0.25 1 1 0 0 0
................................CTCACGTTTATCTGTGCACATTCACT.................................................................................................................................................................................................................................................. 26 0 4 0.25 1 1 0 0 0
............................................TGTGCACATTCACTTTTTCACAAT........................................................................................................................................................................................................................................ 24 0 4 0.25 1 1 0 0 0
.............AGCCACGAAGTTAGTCAAACTCACG...................................................................................................................................................................................................................................................................... 25 1 4 0.25 1 1 0 0 0
.................................AAACGTTTATCTGTGCACAT....................................................................................................................................................................................................................................................... 20 2 6 0.17 1 0 1 0 0
.....................................................................................................................................................................................................................................................................................GAAGATGTGGCAGACGTT..... 18 2 11 0.09 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000008840:750-1049 - dwi_4142 TCGAT-AGTGACTATCGGTGCTT---------CAATGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAG------TGCAAATAGACACGTGTAAGTGAAAAAGTGTTAACTTTTTGGTACATTTTT--ATTAATAA----------ACA----------------------TT-TATCCTCCACT---TTTTAGTCAATGAATATTGAAGTATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCCTCATTCAAAATGGACAGATTTGTGGCTAAAACAAGTAAGTGTTTTTATACAAAGTATGTAAAATGTGTATCTAATATATTTGATCACTTTTTAG---------------AAA----------AAGA-T------TGTACTTTGTCTTCTTCTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACA----------------------------------------------------------------TCGACTGCAACTGCA
droVir3 scaffold_12970:6439297-6439462 + ACAGC-AATTGCAACAGCAAAAC---TTACAACTACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC------AAC----------------------------------------------------------AACAACAACA---ACTTCA------ACAGCAGCAACAACAACAACTTCAGCAG---CAGCA-----------------------------------------GCAGCA---A--------------------------------------------------CA--------------------------------------------------------------------------------------------ACAACAACAGCTTCAGCTG--------------------------------------CTCTATCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-AGAAGAT-----------GCAGCAGCAATG---------------------------------------------ACAAAAGAAGAAA
droMoj3 scaffold_6498:2285276-2285567 - ATTGC-GGAAGAGAGTACCGTAC---AA---GCGGCAACACTTCAAATTTGATTGAGCACTTAAGGCGTGTACATTCCTTGATTATAAACGACCACGTTGAAACAACTGCTCCA--AAATTGAACCAATATCTTTTA----------------CGTAC---------------------------GAAAC-----------------------------------------------------------------ATACGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------------------------------CAACTTGGCAAAAAAAAGGCATG------------------------TATTCAAA--------------------TGATTGCGCTTGAATTAGAGCTATTTAGTGTTGTGGAAAATATTGGATTTAGAGCATTTGTTTGTAATATGGATCCAAAATATATTTTGCC-CAGCCGGA----------------------------------------------------------------GATACTTGAAGGACG
droGri2 scaffold_15245:6140916-6141126 + CCAC--AGCCATAGCAGCAGCAA---CA---GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGC------AGC----------------------------------------------------------A---------------------------GCAGCAGCAGCAACAGCAGCAACAG---CAGCA-----------------------------------------GCAGCAGCAG--------------------------------------CAACAACAGCAGCA--------------------------------------------------------------------------------------------A------------CAGCAGCAGCAGC---AGCAACAGCGACAATCAAGTGACGACAACGCTA-CACAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CAAGCGA-A-----------AACAA--------------AAATCCAGCAAGTGAAAACTCACTTTTAAACTAAACCACATTGAAAGCA
dp5 XL_group1e:6613683-6614041 - ATTGG-AACAAGGAATATAAGAC---CA---GTGGAAACACTTCAAACTTGCATGACCT-------ACGTTCCACCCGAATTTG---------------AGGAGCCATACTCCC--GATTCCGGCATACCAGCTGCAGATGCT----------TGTACTGACAGCGAAAACATTTCAT--------------------------------------------------------------------------------------------------------------------------------------------CGCAG---CAGTT---------GCAGATCAAGTATGCGGTCAATGGAC----------------------T------CGTATTTTAAAAGAGATGTTGTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GACGCAAACTC-CAA-G--CG--AAAAAAATACATTGATAAAGTTTT------------------------AACAGAGA--------------------TGGTTGCAAAAGATGTGCAGCCCTTTAGTATCGTTGAGAACGAAGGCTTTATCAAATATTCCCAAGTTATGGATCCACGATAC----TTCC-CAGCCGGA----------------------------------------------------------------CACATTTGGCCAATG
droPer2 scaffold_13:40704-40838 + TCATC-ATCATCAGCTACAACAG---CA---ACTGCTGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGC------AAC----------------------------------------------------------AACA---------------------ACAACAGCAGCAACAGCAACTGCA---G------CA-----------------------------------GCAACAGCA---GCAA--------------------------------------CAACAGCAATTACA--------------------------------------------------------------------------------------------A---------------CAGCAGCAAC---AGCAAC-----------AGCAGCAACAACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCT
droAna3 scaffold_13248:4515514-4515818 - AGTGC-GGTAAACAGTATAAAAC---CG---GTGGAAACACGACCAACCTTATGGATCACTTGAAGCGCATCCATCCTACGCTACTTAAAGATCAGCCATTAGAAAAAGCA--AAAT--GC----------------ATGACAAAATTCCTGGAGCGT---------------------------GATAT-----------------------------------------------------------------CCTCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--------AATACCTCT------------------G-A--AA--AAAGAAACTCATTGACAAGTACCA------------------------ACTGAATA--------------------TGATCGCGTTCGATGTCTTACCTCTAAATGTGGTTAATAATGTTGGGTTAACCAAGATGATCCATGAACTAGATCCACGTTATAAAATGCA-GAGTAAGA----------------------------------------------------------------CTCACCTGCGCAATG
droBip1 scf7180000396439:14406-14711 - TGTGC-AGTCAAGTATATAAAAC---AG---GTGGGAACATAAGAAATTTAATGAACCACCTGAAACGATCACACCCAACCACGATCACAACGCCA-----------------A--AGTCC-----------------------------------------------------------------------------------------GA----------------------------------------------------------GCAAA-----CCC----------------------TG------------------------------------------------------------------------------GGTTCATTTCTGAATGTGGCTACCACCAAGGGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GCTTTGGGGTC-AAC-A--CG--AAAAGCGAAATTGGACGAGGCTCT------------------------AATGAAAA--------------------TGGTTGCAACAGATTTGCAGCCGTTTCGTGTTGTGGAGGACACCGGATTTCGGAATTTTGTCCGGTGCTTGGATCCCCAGTATGTATTGCC-AAGTAGAA----------------------------------------------------------------CAACATTAAGCTCGG
droKik1 scf7180000302515:8040-8376 + TGCTT-CTTCATCATTATCATCT--------GCTTCGACT--------------------------------------------------------------------------------------------------------------------------------------------------------------GATGCTTTATCATT----------------------------------------------------------ATCA---------TCTGCTTCTTCTGCTGTTGCTTCAACATCTTTTGCT---TCGTCTGCT-----------------------------------------GCTGCT---TCAT--------------------------------TATCTCTTGCTTCGCCT--------------------------------------------------------------------------------------------G---------------ATGCTGGTTCATTATCATC-----------ATCTGCTTCTTCGTCTGCTGCTTGGTCCACTAAGGGAAATGTGGAATCTGAATTTGAGTTTGATTCC--------TTGAAAACGCAAGAAAACCGGATCA-GACGTTTGGAAA-----TATTTTGAGAAGTGTAA------------------------AAACCAAA--------------------TGTTTGCCAAATG---------------------------------------------------------------------------------------------------TCGGTTTTGTGGAAAGGGGTATAAAACTTCTGGAAAC-------------ACAACAAACTTATCTGA
droFic1 scf7180000451688:4683-4988 - TCTGT-GGGCATGTCTACAAATC---CT---GTGGAAACACCACAAACCTATGCAATCATTTGAAGCGGGCTCATCCGACTGTGCTCAGCGTTCCA-----------------AAAG--CC----------------GTAGCAAGGATTGCGGACCTT---------------------------TTCGA-----------------------------------------------------------------CACTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCG--------AAGAAAACGTAC-AAAAATGGCTC-ATC-C--CG--GAAATCTTTGCTGGACAAGGCTCT------------------------TATTTCGA--------------------TGATCGCTACAGACCTACAGCCTTTCAGGATTGTGGAGGACGCAGGATTCCGCAATTTTGTCTACTGTCTGGACCCGCAATATACTTTACC-CTGCAGGA----------------------------------------------------------------GGACATTAAATGATG
droEle1 scf7180000490968:85784-86101 - ATTGT-GGCGAAGAATACAAGAC---AA---GCGGCAATACATCTAACTTGCACGACCATTTAAAAAGGTTCCATCCTGGCGTG---------------GAAAGAAAGAGCCCA--GAATCGAGCACACAAGTTGTA----------------CGTGCTGAGAGGAACGTCACTATAT--------------------------------------------------------------------------------------CTACA-------------------------------------------------AGCAG---CAGTT---------GCAGATCGAGCATGAACACTGTGGCG----------------------T------CTTACTTTAAAAGAGCCGTCATGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GATTCAAATTC-TAA-A--AG--AAAGACTGACATAGATAAAGCTCT------------------------AACTGAAA--------------------TGGTTGCCAAAGATGTG---------------------------------------------------TTGGATCCTCGGTATAAATTACC-CAGCAAGA----------------------------------------------------------------CGCACTTAAGAGATG
droRho1 scf7180000777461:605-887 - AATGC-GGGAAAATTTATGTGAC---AA---GCGGAAATACATCAAATCTATTTGACCACCTTAAACGCATGCACAAGAAC--G----------------------------------------------------------------------------------------------ATGAT--------------------------------------------------------------------------------------------------CT----------------------TG------------------------------------------------------------------------------ACCTTAAACCCGTTTTTAGCTGGTCCATTAGCATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GATAAAACGTC-CAA-A--CG--GAAGCAAGAAATTGATAAGGCATT------------------------GGCCCGAA--------------------TGGTTGCTGTAGACGTGCAACCATTTTATATTGTGGAAAATCGGGGTTTTTGCGACCTTTTAAACATAATTGACCCAAAATATCGCGTACC-GCCCAGAA----------------------------------------------------------------GCAAATTAACCAATG
droBia1 scf7180000301589:49597-49907 - TGTTC-AAAGA--CGTATCGTAC---CA---GCGGAAATACGTCTAATCTGAAAGACCATCTGACGAGGAAGCCCCCGGAGC-A----------------------------------------------------------------------------------------------CAAATCTTTAGAAATTCCCG-------------------------------------------------------------T--ACCTAAAA----------ACC----------------------TG----------------------------------------------------------------------------------------CGTACTTTGAGAGCGCCAAGACGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GAGGACGCATC-AAA-A--AG--TAAACATAGCATCGATATGGCAGT------------------------GGCAAAAA--------------------TGATAGCCATGGACGTTCAGCTTAT-TTAATTGTTGAAAACGAGTGTTTTATCAACCTCCTCAAAATTGTTGATCTCAAATACAAAGTACC-AAGTCGGTACCAGATTCGCGATA-------------------------------------------------TCTATCTAAAAAACA
droTak1 scf7180000415823:2344-2604 + TCCTT-CGTCTGCTCC--TTCAT---TT---GATGCTTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------TCGCCTAC------TCC----------------------------------------------------------TTCA---------------------TCTGCTGCGTCGTTCCCATCTCCA---T------CT-----------------------------------TCGTCTGCT---GATA--------------------------------------TTTTGGAAAATCCA--------------------------------------------------------------------------------------------G---------------AATCGGAATT---TGA-----------------------------------------------------------------------CTGTGACCCTCCAGACATTAAAAAACGGAAGAAATCTGTTTCA-GAAGTGTGGAAA-----TACTTTGAGAGGTGCAA------------------------AAACATAA--------------------TGTTTGCCAAATG---------------------------------------------------------------------------------------------------TCGACTTTGCGGAAAGGAGTATAAAACTTCCGGCAAC-------------ACATCAAACCTAATAGA
droEug1 scf7180000409537:27200-27499 - ATTGT-CATAAGGTGTACAAGAC---AA---GCGGGAACACATCGAATCTTTTCGACCACATGAAGCGCATACATCCAACATTAGGCGC------------------------------------------------------------------------------------------------TGATGATTTGCCGTCGAC------TTA----------------------------------------------------------AAAAA-----AAA----------------------TA------------------------------------------------------------------------------GATTCTTT------TGTAA------CTACATCCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GATTCGAATTC-CCT-C--AG--AAAAGCTGAACTTGATAGGGCTGT------------------------CATGAAAT--------------------ACGTAGCCACAGACATGCGCCCGTTCTCAGTTGTGGAAGATACTGGCTTTCGCGAGATGTTGAATGTTTTTGATCCCCGGTACAAGTTACC-CTCTCGAA----------------------------------------------------------------AGACCTTGCAAAATG
dm3 chr3L:9702091-9702258 + ACAGC-AGCAGCAACATCAACA---------GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCAACACCAACAACAGCA---ACACCAACA-----------------------------------------GCAGCA---ACAG--------------------------------CAACAGAAGCAGCTCCA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGCAGCAGCATC------AATGGAGCGCCAACAACGGCAGCAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CAAAGGA-----------GCAACAATTATG------------------------------------------------------CCAA
droSim2 3l:9459994-9460176 + TCAAC-AGCAACAGCAGCAGCAACAGCATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGC------AAC----------------------------------------------------------ATCA---------------------ACAGCAGCAACATCAACAGCAGCA---ACACCAACA-----------------------------------------GCAGCA---ACAG--------------------------------CAACAGAAGCAGCTCCA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGC---AGCATC------AATGGAGCGGCAACAACGGCAGCAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CAAAGGA-----------GCAACAACTATG------------------------------------------------------CCAA
droSec2 scaffold_0:1935886-1936052 + CACCA--ACAGCAGCAGCATCA---------ACAGCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGC------AAA----------------------------------------------------------ATCA---------------------ACAGCAGCAACATCAGCATCAGCA---A------CA-----------------------------------CCAACAGCA---GCAA--------------------------------------CAGAAGCAGCTCCA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGC---AGCATC------AATGGAGCGGCAACAACGGCAGCAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CAAAGGA-----------GCAACAACTATG------------------------------------------------------CCAA
droYak3 3R:6702074-6702290 + ATTAACATGTAAAGCGACAACAT---------AGATATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------ACT--------------------------------------------TTTTG-----T--------------TTTAATTG---------------------CAGGTAAGGGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGAAGATAAATC-G--CG--AAAAAAAT-----AAAAGTTGGCAAATCAAAATCGTGGTAAATCGTAAGGTAACTTTGACCAGTCAATCGACGGTCGGTCTGCCAAGTG---------------------------------------------------------------------------------------------------CATTTATTATGCAAAAGTGTATAAAACAAGTGGCAAA-------------AAATCAAATTTGTTTGA
droEre2 scaffold_4690:5954482-5954645 + ACAGC-AGCTGCAGCAGCAACAA---------CTGCAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAC------TGC----------------------------------------------------------AACAACAG---------------------CAGCTGCAACTGCAACAGCA---G------CT-----------------------------------GCAACTGCA---ACAG--------------------------------------CAGCTGCAACTGCA--------------------------------------------------------------------------------------------A---------------CAGCAGCAGC---A--------------------GCAACAACAGCAGGTGCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAT-C--------------------------------------------------------AAATTGCC-ACAGAAAA----------------------------------------------------------------CTCAAATTATATACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TCGAT-AGTGACTATCGGTGCTT---------CAATGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAG------TGCAAATAGACACGTGTAAGTGAAAAAGTGTTAACTTTTTGGTACATTTTT--ATTAATAA----------ACA----------------------TT-TATCCTCCACT---TTTTAGTCAATGAATATTGAAGTATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCCTCATTCAAAATGGACAGATTTGTGGCTAAAACAAGTAAGTGTTTTTATACAAAGTATGTAAAATGTGTATCTAATATATTTGATCACTTTTTAG---------------AAA----------AAGA-T------TGTACTTTGTCTTCTTCTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACA----------------------------------------------------------------TCGACTGCAACTGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................AGTATTAGTATA-----------------------------------------------------------------TGGATGGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2331.00303000
.........................................................................................................................................................................................................................................................................................................................................................ATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2231.00302010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACA----------------------------------------------------------------TCGACTGCAAC....2621.00202000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACA----------------------------------------------------------------TCGACTGCAACTG..2321.00202000
..................................ATGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAG------TGCAAATAGACACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.75302010
...........................................................................................................................................................................................................................................................................................................................................................TAGTATA-----------------------------------------------------------------TGGATGGCAGTTCCTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.67202000
........................................................................................................................................................................................................................................................................................................................................................TATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.67202000
........................................................................................................................................................................................................................................................................................................................................................TATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.67202000
........................................................................................................................................................................................................................................................................................................................................................TATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.67202000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACA----------------------------------------------------------------TCGACTGCAAC....2320.50101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACA----------------------------------------------------------------TCGACTGCAACTGCA2520.50101000
.......................................T--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAG------TGCAAATAGACACGTGTAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.50200110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCAAAATGGACAGATTTGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTTCTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACA----------------------------------------------------------------TCGAC..........2420.50101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATTCAAAATGGACAGATTTGTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCATTCAAAATGGACAGATTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACA----------------------------------------------------------------TCGACTGCAACTGC.2420.50101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACA----------------------------------------------------------------TCGACTGCAACTG..2520.50101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACA----------------------------------------------------------------TCGACTGCAACTGCA2720.50101000
......................................................................................................................................................................................................................................................................................................................................................AGTATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33101000
.......................................................................................................................................................................................................................................................................................................................................................GTATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33100010
...................................................................................................................................................................................................................................................................................................................................................TGAAGTATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.33101000
...................................................................................................................................................................................................................................................................................................................................................TGAAGTATTAGTATA-----------------------------------------------------------------TGGATGGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000
.........................................................................................................................................................................................................................................................................................................................................................ATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33100010
.........................................................................................................................................................................................................................................................................................................................................................ATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCCTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33100010
.........................................................................................................................................................................................................................................................................................................................................................ATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.33101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATATATTTGATCACTTTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000
.........................................................................................................................................................................................................................................................................................................................................................ATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCCTCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.33101000
.........................................................................................................................................................................................................................................................................................................................................................ATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTCCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100010
......................................................................................................................................................................................................................................................................................................................................................AGTATTAGTATA-----------------------------------------------------------------TGGATGGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.33101000
.......................................................................................................................................................................................................................................................................................................................................................GTATTAGTATA-----------------------------------------------------------------TGGATGGCAGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000
......................................................................................................................................................................................................................................................................................................................................................AGTATTAGTATA-----------------------------------------------------------------TGGATGGCAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000
............TATCGGTGCTT---------CAATGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAG------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25101000
........................................................................................................................................................................................................GAG------TGCAAATAGACACGTGTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25100010
...AT-AGTGACTATCGGTGCTT---------CAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25100100
.....................TT---------CAATGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAG------TGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.25101000
...................GCTT---------CAATGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAG------TGCAAATAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25101000
...............................................................................................................................................................................................................................................................................................................................................................ATA-----------------------------------------------------------------TGGATGGCAGTTCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.25100010
..................................ATGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAG------TGCAAATAGACAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25101000
......................T---------CAATGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAG------TGCAAATAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25101000
...............................................................................................................................................................................................................................................................................................................................................................ATA-----------------------------------------------------------------TGGATGGCAGTTCCTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.25100010
...........CTATCGGTGCTT---------CAATGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.25100010
...................................................................................................................................................................................................................................................................T--ATTAATAA----------ACA----------------------TT-TATCCTCCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25101000
...........................................................................................................................................................................................................................................................................TAA----------ACA----------------------TT-TATCCTCCACT---TTTTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000
droVir3
ACAGC-AATTGCAACAGCAAAAC---TTACAACTACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC------AAC----------------------------------------------------------AACAACAACA---ACTTCA------ACAGCAGCAACAACAACAACTTCAGCAG---CAGCA-----------------------------------------GCAGCA---A--------------------------------------------------CA--------------------------------------------------------------------------------------------ACAACAACAGCTTCAGCTG--------------------------------------CTCTATCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-AGAAGAT-----------GCAGCAGCAATG---------------------------------------------ACAAAAGAAGAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAT-----------GCAGCAGCAATG---------------------------------------------ACAA.........2011.001000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AGAAGAT-----------GCAGCAGCAATG---------------------------------------------A............2111.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................CAACAACAACAACTTCAGCAG---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CAGCA-----------------------------------------GCAGCA---A--------------------------------------------------CA--------------------------------------------------------------------------------------------ACAACAACAGCT................................................................................................................................................................................................................................................................................................................................................................................................................2650.201000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................C------AAC----------------------------------------------------------AACAACAACA---ACTTCA------AC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.201000100000000000000000000000000000000000000000000000000000000000
...............................ACTACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC------AAC----------------------------------------------------------AACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................A------ACAGCAGCAACAACAACAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22130.081000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ACAGCAGCAACAACAACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
.............................CAACTACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC------AAC----------------------------------------------------------AACAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AGCA-----------------------------------------GCAGCA---A--------------------------------------------------CA--------------------------------------------------------------------------------------------ACAACAAC....................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
..............................AACTACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC------AAC----------------------------------------------------------AACAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................ACAAC------AAC----------------------------------------------------------AACAACAACA---ACTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AG---CAGCA-----------------------------------------GCAGCA---A--------------------------------------------------CA--------------------------------------------------------------------------------------------ACAACAAC....................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000001000000000000000000000000000
droMoj3
ATTGC-GGAAGAGAGTACCGTAC---AA---GCGGCAACACTTCAAATTTGATTGAGCACTTAAGGCGTGTACATTCCTTGATTATAAACGACCACGTTGAAACAACTGCTCCA--AAATTGAACCAATATCTTTTA----------------CGTAC---------------------------GAAAC-----------------------------------------------------------------ATACGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------------------------------CAACTTGGCAAAAAAAAGGCATG------------------------TATTCAAA--------------------TGATTGCGCTTGAATTAGAGCTATTTAGTGTTGTGGAAAATATTGGATTTAGAGCATTTGTTTGTAATATGGATCCAAAATATATTTTGCC-CAGCCGGA----------------------------------------------------------------GATACTTGAAGGACGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................ACCACGTTGAAACAACTGCTCCA--AA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG------------------------TATTCAAA--------------------TGATTGCGCTTGA......................................................................................................................................................................2412.002200000
...........................................................................................ACCACGTTGAAACAACTGCTCCA--A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATG------------------------TATTCAAA--------------------TGATTGCGCTTG.......................................................................................................................................................................2412.002200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG------------------------TATTCAAA--------------------TGATTGCGCTTG.......................................................................................................................................................................2211.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG------------------------TATTCAAA--------------------TGATTGCGCTT........................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATG------------------------TATTCAAA--------------------TGATTGCGCTTGAACC...................................................................................................................................................................2811.001100000
............................................................................................CCACGTTGAAACAACTGCTCCA--AA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......GAAGAGAGTACCGTAC---AA---GCGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGTGGAAAATATTGGATTTAGAGC............................................................................................................................2811.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG------------------------TATTCAAA--------------------TGATTGCGCTTGAAT....................................................................................................................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTAATATGGATCCAAAATATATCC............................................................................................2811.001100000
..............................................ATTTGATTGAGCACTTAAGGCGTGTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTGTAATATGGATCCAAAATA.................................................................................................2511.001100000
...........................................................................................................TGCTCCA--AAATTGAACCAATATCTTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
......................................................................................................................ATTGAACCAATATCTTTTA----------------CGTAC---------------------------G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGTGGAAAATATTGGATTTAGA..............................................................................................................................2611.001100000
......................................................................................................................................TTA----------------CGTAC---------------------------GAAAC-----------------------------------------------------------------ATACGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------------------------------C.............................................................................................................................................................................................................................................................2311.001100000
............................................................................................CCACGTTGAAACAACTGCTCCA--AAATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
........................................................................................................................TGAACCAATATCTTTTA----------------CGTAC---------------------------GAAAC-----------------------------------------------------------------A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.......GAAGAGAGTACCGTAC---AA---GCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...........................................................................................ACCACGTTGAAACAACTGCTCCA--AAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGTGGAAAATATTGGATTTA................................................................................................................................2411.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTGTAATATGGATCCAAAAT..................................................................................................2411.001100000
.............................................................................................................................CAATATCTTTTA----------------CGTAC---------------------------GAAAC-----------------------------------------------------------------ATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTAATATGGATCCAAAATA.................................................................................................2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCATG------------------------TATTCAAA--------------------TGATTGCGCC.........................................................................................................................................................................2611.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAATATGGATCCAAAATATATTT............................................................................................2511.001100000
..............................................ATTTGATTGAGCACTTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG------------------------TATTCAAA--------------------TGATTGCGCTTGAATG...................................................................................................................................................................2611.001100000
........................................................................CATTCCTTGATTATAAACGACCACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.......................................................................................................................................TA----------------CGTAC---------------------------GAAAC-----------------------------------------------------------------ATACGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------------------------------CAAC..........................................................................................................................................................................................................................................................2511.001100000
...........................................................................TCCTTGATTATAAACGACCACGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100
...........................................................................................ACCACGTTGAAACAACTGCTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.332100010
...........................................................................................ACCACGTTGAAACAACTGCTCCA--......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.171100000
............................................................................................CCACGTTGAAACAACTGCTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.171100000
droGri2
CCAC--AGCCATAGCAGCAGCAA---CA---GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGC------AGC----------------------------------------------------------A---------------------------GCAGCAGCAGCAACAGCAGCAACAG---CAGCA-----------------------------------------GCAGCAGCAG--------------------------------------CAACAACAGCAGCA--------------------------------------------------------------------------------------------A------------CAGCAGCAGCAGC---AGCAACAGCGACAATCAAGTGACGACAACGCTA-CACAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CAAGCGA-A-----------AACAA--------------AAATCCAGCAAGTGAAAACTCACTTTTAAACTAAACCACATTGAAAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCGACAATCAAGTGACG.......................................................................................................................................................................................................................................................................................................................................................................2411.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACAATCAAGTGACGACAAC..................................................................................................................................................................................................................................................................................................................................................................2211.00110
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAAACCACATTGAAAGCA2111.00110
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGTGACGACAACGCTA-.............................................................................................................................................................................................................................................................................................................................................................2011.00101
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-A-----------AACAA--------------AAATCCAGCAAGTGAAAACT.............................2811.00110
......................A---CA---GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGC------AGC----------------------------------------------------------A---------------------------GCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50110
.................................AGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGC------AGC----------------------------------------------------------A---------------------------GCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.33110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGC---AGCAACAGCGACA..................................................................................................................................................................................................................................................................................................................................................................................2460.17110
................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------------------------------------------------------------------------------------------A------------CAGCAGCAGCAGC---AGCAACAGCG.....................................................................................................................................................................................................................................................................................................................................................................................2660.17110
..................................GCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGC------AGC----------------------------------------------------------A---------------------------GCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.11110
....................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAG--------------------------------------CAACAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10220
...............................................................................................................................................................................................................................................................................................................................ACAG---CAGCA-----------------------------------------GCAGCAGCAG--------------------------------------CAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10220
.....................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG--------------------------------------CAACAACAGCAGCA--------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................23200.10220
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---AGCAACAGCGACA..................................................................................................................................................................................................................................................................................................................................................................................18200.05110
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCA--------------------------------------------------------------------------------------------A------------CAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................20200.05110
.....................................ACA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGC------AGC----------------------------------------------------------A---------------------------GCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110
..........................................................................................................................................................................................................C------AGC----------------------------------------------------------A---------------------------GCAGCAGCAGCAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05110
...................................................................................................................................................................................................................C----------------------------------------------------------A---------------------------GCAGCAGCAGCAACAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110
...............................................................................................................................................................................................................................................................................................................................ACAG---CAGCA-----------------------------------------GCAGCAGCAG--------------------------------------CAACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05110
..........................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------------------------------CAACAACAGCAGCA--------------------------------------------------------------------------------------------A------------CAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................27200.05110
dp5
ATTGG-AACAAGGAATATAAGAC---CA---GTGGAAACACTTCAAACTTGCATGACCT-------ACGTTCCACCCGAATTTG---------------AGGAGCCATACTCCC--GATTCCGGCATACCAGCTGCAGATGCT----------TGTACTGACAGCGAAAACATTTCAT--------------------------------------------------------------------------------------------------------------------------------------------CGCAG---CAGTT---------GCAGATCAAGTATGCGGTCAATGGAC----------------------T------CGTATTTTAAAAGAGATGTTGTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GACGCAAACTC-CAA-G--CG--AAAAAAATACATTGATAAAGTTTT------------------------AACAGAGA--------------------TGGTTGCAAAAGATGTGCAGCCCTTTAGTATCGTTGAGAACGAAGGCTTTATCAAATATTCCCAAGTTATGGATCCACGATAC----TTCC-CAGCCGGA----------------------------------------------------------------CACATTTGGCCAATGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TCATC-ATCATCAGCTACAACAG---CA---ACTGCTGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGC------AAC----------------------------------------------------------AACA---------------------ACAACAGCAGCAACAGCAACTGCA---G------CA-----------------------------------GCAACAGCA---GCAA--------------------------------------CAACAGCAATTACA--------------------------------------------------------------------------------------------A---------------CAGCAGCAAC---AGCAAC-----------AGCAGCAACAACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................GC------AAC----------------------------------------------------------AACA---------------------ACAACAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
.................................................................................................................................................................................................................AAC----------------------------------------------------------AACA---------------------ACAACAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
..................................................................................................................................................................................................................AC----------------------------------------------------------AACA---------------------ACAACAGCAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droAna3
AGTGC-GGTAAACAGTATAAAAC---CG---GTGGAAACACGACCAACCTTATGGATCACTTGAAGCGCATCCATCCTACGCTACTTAAAGATCAGCCATTAGAAAAAGCA--AAAT--GC----------------ATGACAAAATTCCTGGAGCGT---------------------------GATAT-----------------------------------------------------------------CCTCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--------AATACCTCT------------------G-A--AA--AAAGAAACTCATTGACAAGTACCA------------------------ACTGAATA--------------------TGATCGCGTTCGATGTCTTACCTCTAAATGTGGTTAATAATGTTGGGTTAACCAAGATGATCCATGAACTAGATCCACGTTATAAAATGCA-GAGTAAGA----------------------------------------------------------------CTCACCTGCGCAATGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................TTAAAGATCAGCCATTAGAAAAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACCAAGATGATCCATGAACTAGATC........................................................................................................2711.001010000
.............................................................................................................................................CAAAATTCCTGGAGCGT---------------------------GATAT-----------------------------------------------------------------CCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------TGATCGCGTTCGATGTCTTACCTCT..........................................................................................................................................................2611.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCACGTTATAAAATGCA-GAGTAAGT----------------------------------------------------------------...............2711.001010000
..........................................................................................................AAGCA--AAAT--GC----------------ATGACAAAATTCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
........................................................TCACTTGAAGCGCATCCATCCTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--------------------TGATCGCGTTCGATGTCTTACC.............................................................................................................................................................2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACCAAGATGATCCATGAACTAGATCCA......................................................................................................2911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCT------------------G-A--AA--AAAGAAACTCATT..................................................................................................................................................................................................................................................2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCA------------------------ACTGAATA--------------------TGATCGCGTTCGAT.....................................................................................................................................................................2611.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AA--AAAGAAACTCATTGACAAGTACC........................................................................................................................................................................................................................................2611.001100000
.............................................................TGAAGCGCATCCATCCTACGCTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAATGTGGTTAATAATGTTGGGT...................................................................................................................................2620.501010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCTAAATGTGGTTAATAATGT........................................................................................................................................2520.501010000
........................................................................................................................................................GAGCGT---------------------------GATAT-----------------------------------------------------------------CCTCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--------AATACC.............................................................................................................................................................................................................................................................................................2720.501010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGTTAATAATGTTGGGTTAAC...............................................................................................................................2520.501001000
droBip1
TGTGC-AGTCAAGTATATAAAAC---AG---GTGGGAACATAAGAAATTTAATGAACCACCTGAAACGATCACACCCAACCACGATCACAACGCCA-----------------A--AGTCC-----------------------------------------------------------------------------------------GA----------------------------------------------------------GCAAA-----CCC----------------------TG------------------------------------------------------------------------------GGTTCATTTCTGAATGTGGCTACCACCAAGGGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GCTTTGGGGTC-AAC-A--CG--AAAAGCGAAATTGGACGAGGCTCT------------------------AATGAAAA--------------------TGGTTGCAACAGATTTGCAGCCGTTTCGTGTTGTGGAGGACACCGGATTTCGGAATTTTGTCCGGTGCTTGGATCCCCAGTATGTATTGCC-AAGTAGAA----------------------------------------------------------------CAACATTAAGCTCGGSizeHit CountTotal NormTotal
No Reads
droKik1
TGCTT-CTTCATCATTATCATCT--------GCTTCGACT--------------------------------------------------------------------------------------------------------------------------------------------------------------GATGCTTTATCATT----------------------------------------------------------ATCA---------TCTGCTTCTTCTGCTGTTGCTTCAACATCTTTTGCT---TCGTCTGCT-----------------------------------------GCTGCT---TCAT--------------------------------TATCTCTTGCTTCGCCT--------------------------------------------------------------------------------------------G---------------ATGCTGGTTCATTATCATC-----------ATCTGCTTCTTCGTCTGCTGCTTGGTCCACTAAGGGAAATGTGGAATCTGAATTTGAGTTTGATTCC--------TTGAAAACGCAAGAAAACCGGATCA-GACGTTTGGAAA-----TATTTTGAGAAGTGTAA------------------------AAACCAAA--------------------TGTTTGCCAAATG---------------------------------------------------------------------------------------------------TCGGTTTTGTGGAAAGGGGTATAAAACTTCTGGAAAC-------------ACAACAAACTTATCTGASizeHit CountTotal NormTotal
No Reads
droFic1
TCTGT-GGGCATGTCTACAAATC---CT---GTGGAAACACCACAAACCTATGCAATCATTTGAAGCGGGCTCATCCGACTGTGCTCAGCGTTCCA-----------------AAAG--CC----------------GTAGCAAGGATTGCGGACCTT---------------------------TTCGA-----------------------------------------------------------------CACTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCG--------AAGAAAACGTAC-AAAAATGGCTC-ATC-C--CG--GAAATCTTTGCTGGACAAGGCTCT------------------------TATTTCGA--------------------TGATCGCTACAGACCTACAGCCTTTCAGGATTGTGGAGGACGCAGGATTCCGCAATTTTGTCTACTGTCTGGACCCGCAATATACTTTACC-CTGCAGGA----------------------------------------------------------------GGACATTAAATGATGSizeHit CountTotal NormTotal
No Reads
droEle1
ATTGT-GGCGAAGAATACAAGAC---AA---GCGGCAATACATCTAACTTGCACGACCATTTAAAAAGGTTCCATCCTGGCGTG---------------GAAAGAAAGAGCCCA--GAATCGAGCACACAAGTTGTA----------------CGTGCTGAGAGGAACGTCACTATAT--------------------------------------------------------------------------------------CTACA-------------------------------------------------AGCAG---CAGTT---------GCAGATCGAGCATGAACACTGTGGCG----------------------T------CTTACTTTAAAAGAGCCGTCATGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GATTCAAATTC-TAA-A--AG--AAAGACTGACATAGATAAAGCTCT------------------------AACTGAAA--------------------TGGTTGCCAAAGATGTG---------------------------------------------------TTGGATCCTCGGTATAAATTACC-CAGCAAGA----------------------------------------------------------------CGCACTTAAGAGATGSizeHit CountTotal NormTotal
No Reads
droRho1
AATGC-GGGAAAATTTATGTGAC---AA---GCGGAAATACATCAAATCTATTTGACCACCTTAAACGCATGCACAAGAAC--G----------------------------------------------------------------------------------------------ATGAT--------------------------------------------------------------------------------------------------CT----------------------TG------------------------------------------------------------------------------ACCTTAAACCCGTTTTTAGCTGGTCCATTAGCATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GATAAAACGTC-CAA-A--CG--GAAGCAAGAAATTGATAAGGCATT------------------------GGCCCGAA--------------------TGGTTGCTGTAGACGTGCAACCATTTTATATTGTGGAAAATCGGGGTTTTTGCGACCTTTTAAACATAATTGACCCAAAATATCGCGTACC-GCCCAGAA----------------------------------------------------------------GCAAATTAACCAATGSizeHit CountTotal NormTotal
No Reads
droBia1
TGTTC-AAAGA--CGTATCGTAC---CA---GCGGAAATACGTCTAATCTGAAAGACCATCTGACGAGGAAGCCCCCGGAGC-A----------------------------------------------------------------------------------------------CAAATCTTTAGAAATTCCCG-------------------------------------------------------------T--ACCTAAAA----------ACC----------------------TG----------------------------------------------------------------------------------------CGTACTTTGAGAGCGCCAAGACGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GAGGACGCATC-AAA-A--AG--TAAACATAGCATCGATATGGCAGT------------------------GGCAAAAA--------------------TGATAGCCATGGACGTTCAGCTTAT-TTAATTGTTGAAAACGAGTGTTTTATCAACCTCCTCAAAATTGTTGATCTCAAATACAAAGTACC-AAGTCGGTACCAGATTCGCGATA-------------------------------------------------TCTATCTAAAAAACASizeHit CountTotal NormTotal
No Reads
droTak1
TCCTT-CGTCTGCTCC--TTCAT---TT---GATGCTTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------TCGCCTAC------TCC----------------------------------------------------------TTCA---------------------TCTGCTGCGTCGTTCCCATCTCCA---T------CT-----------------------------------TCGTCTGCT---GATA--------------------------------------TTTTGGAAAATCCA--------------------------------------------------------------------------------------------G---------------AATCGGAATT---TGA-----------------------------------------------------------------------CTGTGACCCTCCAGACATTAAAAAACGGAAGAAATCTGTTTCA-GAAGTGTGGAAA-----TACTTTGAGAGGTGCAA------------------------AAACATAA--------------------TGTTTGCCAAATG---------------------------------------------------------------------------------------------------TCGACTTTGCGGAAAGGAGTATAAAACTTCCGGCAAC-------------ACATCAAACCTAATAGASizeHit CountTotal NormTotal
No Reads
droEug1
ATTGT-CATAAGGTGTACAAGAC---AA---GCGGGAACACATCGAATCTTTTCGACCACATGAAGCGCATACATCCAACATTAGGCGC------------------------------------------------------------------------------------------------TGATGATTTGCCGTCGAC------TTA----------------------------------------------------------AAAAA-----AAA----------------------TA------------------------------------------------------------------------------GATTCTTT------TGTAA------CTACATCCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GATTCGAATTC-CCT-C--AG--AAAAGCTGAACTTGATAGGGCTGT------------------------CATGAAAT--------------------ACGTAGCCACAGACATGCGCCCGTTCTCAGTTGTGGAAGATACTGGCTTTCGCGAGATGTTGAATGTTTTTGATCCCCGGTACAAGTTACC-CTCTCGAA----------------------------------------------------------------AGACCTTGCAAAATGSizeHit CountTotal NormTotal
No Reads
dm3
ACAGC-AGCAGCAACATCAACA---------GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCAACACCAACAACAGCA---ACACCAACA-----------------------------------------GCAGCA---ACAG--------------------------------CAACAGAAGCAGCTCCA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGCAGCAGCATC------AATGGAGCGCCAACAACGGCAGCAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CAAAGGA-----------GCAACAATTATG------------------------------------------------------CCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
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S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
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gb3		SRR031692
Head		SRR031693
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S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
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Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
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Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
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Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
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Male-body		V084
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CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
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S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
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Head		V138
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Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.......................................A--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................A-----------------------------------------GCAGCA---ACAG--------------------------------CAACAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................A--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCAACACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAACA---------GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
..........GCAACATCAACA---------GCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CCAACA-----------------------------------------GCAGCA---ACAG--------------------------------CAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CCAACA-----------------------------------------GCAGCA---ACAG--------------------------------CAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCTCCA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGA..................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGCAACATCAACA---------GCAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCTCCA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGG..................................................................................................................................................................................................................................................................................................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................ACAGCA---ACACCAACA-----------------------------------------GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGCAGCAGCATC------AA.................................................................................................................................................................................................................................................................................................................................................................................2490.1110000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CAACA-----------------------------------------GCAGCA---ACAG--------------------------------CAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AGCA---ACACCAACA-----------------------------------------GCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CA-----------------------------------------GCAGCA---ACAG--------------------------------CAACAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
..................................GCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................CA---------GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................A---------GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.................................AGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGC-AGCAGCAACATCAACA---------G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.0810000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAACATCAACA---------GCAGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCAGCAACATCAACA---------GCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCAGCAACATCAACA---------GCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGCAGCAACATCAACA---------GCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................A---------GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................CAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AACA-----------------------------------------GCAGCA---ACAG--------------------------------CAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AACA-----------------------------------------GCAGCA---ACAG--------------------------------CAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CAGC------AGC----------------------------------------------------------A---------------------------GCAGCAACAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................AGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................AGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------------------------------------------------------G---------------CAGCAGCAGCAGCAGCATC------...................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................A---------GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------CAGCAGCAGCAGCAGCATC------A..................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................CAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........CAGCAACATCAACA---------GCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCCA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGCAACATCAACA---------GCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGCAGCAACATCAACA---------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................A---------GCAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CAGCAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................CAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC------AGC----------------------------------------------------------A---------------------------GCAGCAACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCAAC-AGCAACAGCAGCAGCAACAGCATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGC------AAC----------------------------------------------------------ATCA---------------------ACAGCAGCAACATCAACAGCAGCA---ACACCAACA-----------------------------------------GCAGCA---ACAG--------------------------------CAACAGAAGCAGCTCCA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGC---AGCATC------AATGGAGCGGCAACAACGGCAGCAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CAAAGGA-----------GCAACAACTATG------------------------------------------------------CCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGCGGCAACAACGGCAGT............................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
...................GCAACAGCATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.20100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACGGCAGCAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CACC....................................................................................2290.11100000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGC---AGC............................................................................................................................................................................................................................................................................................................................................................................................19180.06100000000000100000
..............................AGCAGCAGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGC------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
......AGCAACAGCAGCAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000000100000
droSec2
CACCA--ACAGCAGCAGCATCA---------ACAGCAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGC------AAA----------------------------------------------------------ATCA---------------------ACAGCAGCAACATCAGCATCAGCA---A------CA-----------------------------------CCAACAGCA---GCAA--------------------------------------CAGAAGCAGCTCCA--------------------------------------------------------------------------------------------G---------------CAGCAGCAGC---AGCATC------AATGGAGCGGCAACAACGGCAGCAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CAAAGGA-----------GCAACAACTATG------------------------------------------------------CCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................C------AAA----------------------------------------------------------ATCA---------------------ACAGCAGCAACAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCGGCAACAACGGCAGC............................................................................................................................................................................................................................................................................................................................................................2011.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACGGCAGCAGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-........................................................................................2111.0010010
....A--ACAGCAGCAGCATCA---------AC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.3320020
droYak3
ATTAACATGTAAAGCGACAACAT---------AGATATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------ACT--------------------------------------------TTTTG-----T--------------TTTAATTG---------------------CAGGTAAGGGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGAAGATAAATC-G--CG--AAAAAAAT-----AAAAGTTGGCAAATCAAAATCGTGGTAAATCGTAAGGTAACTTTGACCAGTCAATCGACGGTCGGTCTGCCAAGTG---------------------------------------------------------------------------------------------------CATTTATTATGCAAAAGTGTATAAAACAAGTGGCAAA-------------AAATCAAATTTGTTTGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAATCAAAATCGTGGTAAATC...................................................................................................................................................................................................................2418.00800000000008
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGGTAAATCGTAAGGTAACTTT......................................................................................................................................................................................................2611.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTTTGACCAGTCAATCGACGGT....................................................................................................................................................................................2511.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACAAGTGGCAAA-------------AAATCAAATT.......2611.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCGTAAGGTAACTTTGACC..................................................................................................................................................................................................2311.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAAACAAGTGGCAAA-------------AAATCA...........2411.00101000000000
....................................................................................................................................................................................................................................................................................TG---------------------CAGGTAAGGGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGAAGA.............................................................................................................................................................................................................................................................................2411.00101000000000
.........TAAAGCGACAACAT---------AGATATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------ACT--------------------------------------------T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100100000000
.....................AT---------AGATATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------ACT--------------------------------------------TTTTG-----T--------------TTTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000000000
droEre2
ACAGC-AGCTGCAGCAGCAACAA---------CTGCAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAC------TGC----------------------------------------------------------AACAACAG---------------------CAGCTGCAACTGCAACAGCA---G------CT-----------------------------------GCAACTGCA---ACAG--------------------------------------CAGCTGCAACTGCA--------------------------------------------------------------------------------------------A---------------CAGCAGCAGC---A--------------------GCAACAACAGCAGGTGCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAT-C--------------------------------------------------------AAATTGCC-ACAGAAAA----------------------------------------------------------------CTCAAATTATATACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------GCAACAACAGCAGGTGCA........................................................................................................................................................................................................................................................................................................................................................1920.5010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---A--------------------GCAACAACAGCAGGTGCA........................................................................................................................................................................................................................................................................................................................................................2320.5011000000
.................................................................................................................................................................................................................TGC----------------------------------------------------------AACAACAG---------------------CAGCTGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---A--------------------GCAACAACAGCAGGTGCA........................................................................................................................................................................................................................................................................................................................................................2120.5011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---A--------------------GCAACAACAGCAGG............................................................................................................................................................................................................................................................................................................................................................1990.1111000000

Generated: 05/18/2015 at 09:50 AM