ID:

dwi_4099

 Coordinate:

scf2_1100000004968:1166437-1166587 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.1

Flybase annnotation

exon [dwil_GLEANR_7255:4]; CDS [Dwil\GK23547-cds]; intron [Dwil\GK23547-in]

Repeatable elements

NameClassFamilyStrand
FW_DMLINEJockey-
mature
  1. scf2_1100000003661:843-867 +
  2. scf2_1100000006218:1175-1199 +
  3. scf2_1100000004736:11343-11367 +
  4. scf2_1100000011593:617-641 +
  5. scf2_1100000000809:88-112 +
  6. scf2_1100000004405:17734-17758 +
  7. scf2_1100000004852:330176-330200 +
  8. scf2_1100000004888:743126-743150 +
  9. scf2_1100000004943:599935-599959 +
  10. scf2_1100000004933:153452-153476 +
  11. scf2_1100000004936:21062-21086 +
  12. scf2_1100000004936:362151-362175 +
  13. scf2_1100000004958:41161-41185 +
  14. scf2_1100000004958:395470-395494 +
  15. scf2_1100000004958:2294132-2294156 +
  16. scf2_1100000004961:2139515-2139539 +
  17. scf2_1100000004962:379926-379950 +
  18. scf2_1100000004967:2461966-2461990 +
  19. dwi_4099  scf2_1100000004968:1166528-1166552 +
  20. scf2_1100000004968:1380016-1380040 +
  21. scf2_1100000001837:992-1016 -
  22. scf2_1100000010346:619-643 -
  23. scf2_1100000001236:878-902 -
  24. scf2_1100000006499:795-819 -
  25. scf2_1100000004515:3794872-3794896 -
  26. scf2_1100000004566:22048-22072 -
  27. scf2_1100000004909:445263-445287 -
  28. scf2_1100000004909:1130967-1130991 -
  29. scf2_1100000004920:8644-8668 -
  30. scf2_1100000004953:560606-560630 -
  31. scf2_1100000004954:677848-677872 -
  32. scf2_1100000004957:5461-5485 -
  33. scf2_1100000004958:489343-489367 -
  34. scf2_1100000004958:1049926-1049950 -
  35. scf2_1100000004961:387780-387804 -
  36. scf2_1100000004965:201332-201356 -
  37. scf2_1100000004967:413605-413629 -
  38. scf2_1100000004967:4509857-4509881 -
  39. scf2_1100000004968:2555808-2555832 -
  40. scf2_1100000004981:527-551 -
  41. scf2_1100000008779:651-675 +
  42. scf2_1100000003787:221-245 +
  43. scf2_1100000009048:457-481 +
  44. scf2_1100000014269:1742-1766 +
  45. scf2_1100000004943:956586-956610 +
  46. scf2_1100000004947:555322-555346 +
  47. scf2_1100000004954:832517-832541 +
  48. scf2_1100000004956:705165-705189 +
  49. scf2_1100000004958:519606-519630 +
  50. scf2_1100000004958:1746014-1746038 +
  51. scf2_1100000004961:3515512-3515536 +
  52. scf2_1100000004967:345485-345509 +
  53. scf2_1100000004968:2146171-2146195 +
  54. scf2_1100000004968:2796983-2797007 +
  55. scf2_1100000010016:1404-1428 +
star
  1. scf2_1100000008779:621-646 +
  2. scf2_1100000006218:1145-1170 +
  3. scf2_1100000000809:58-83 +
  4. scf2_1100000004405:17704-17729 +
  5. scf2_1100000004591:97076-97101 +
  6. scf2_1100000004888:743096-743121 +
  7. scf2_1100000004943:6040083-6040108 +
  8. scf2_1100000004936:21032-21057 +
  9. scf2_1100000004936:362121-362146 +
  10. scf2_1100000004954:832487-832512 +
  11. scf2_1100000004956:705135-705160 +
  12. scf2_1100000004958:41131-41156 +
  13. scf2_1100000004958:519576-519601 +
  14. scf2_1100000004958:2294102-2294127 +
  15. scf2_1100000004961:3515482-3515507 +
  16. scf2_1100000004962:379896-379921 +
  17. scf2_1100000004967:345455-345480 +
  18. scf2_1100000004967:2461936-2461961 +
  19. dwi_4099  scf2_1100000004968:1166498-1166523 +
  20. scf2_1100000004968:2146141-2146166 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTATCGACTTAAAAAACCCAGATGAAACAAACTGGAAAACCGTAGTAAAGGTAAGATTCAAATGATTCCAGCCCATGGTTTTGCCACAATTTTTTTTTTTTTTTTTACGTTTAATATATATTTGTTGAATCTACTCTTAAATTAGAGCCTAACAACAAGTTTGAGATATTATTCTTAGTCTAGTACTTAAGATAAATCCTGGGGATATTGCAGGCGGCCCCAATCACTTGTTATTGGGTTGGTCTGTCAAT
***************************************************************************************************************........((((((((......((((......)))).....))))))))......************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body		 M020
head
.......................................................................................................................................................................................TACTTAAGATAAATCCTGGGGATAT........................................... 25 0 20 24.35 487 487 0 0 0
.....................................................................................................................................................................................AGTACTTAAGATAAATCCTGGGGATAT........................................... 27 0 20 1.75 35 35 0 0 0
..................................................................................................................................................................................TCTAGTACTTAAGATAAATCCTGGGGA.............................................. 27 0 20 1.00 20 20 0 0 0
.TATCGACTTAAAAAACCC........................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1
..ATCGACTTAAAAAACCCAG...................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
.................................GGAAAACCGTAGTAAAGGA....................................................................................................................................................................................................... 19 1 1 1.00 1 0 1 0 0
..............................ACTGGAAAACCGTAGTAAAGGT....................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0
....................................................................................................................................................................................TAGTACTTAAGATAAATCCTGGGGATA............................................ 27 0 20 0.85 17 17 0 0 0
.............................................................................................................................................TTAGAGCCTAACAACAAGTTTGAGA..................................................................................... 25 0 20 0.70 14 10 4 0 0
................................................................................................................................................................................................TAAATCCTGGGGATATTGCAGGCGG.................................. 25 0 20 0.60 12 0 12 0 0
...........................................................................................................................................................................................TAAGATAAATCCTGGGGATATTGC........................................ 24 0 20 0.50 10 0 10 0 0
......................................................................................................................................TCTTAAATTAGAGCCTAACAACAAGTT.......................................................................................... 27 0 20 0.40 8 8 0 0 0
....................................................................................................................................................................................................TCCTGGGGATATTGCAGGCGGCCC............................... 24 0 20 0.35 7 7 0 0 0
.............................................................................................................................................TTAGAGCCTAACAACAAGTTTGAGATA................................................................................... 27 0 20 0.35 7 7 0 0 0
..........................................................................................................................................................................................................GGATATTGCAGGCGGCCCC.............................. 19 0 3 0.33 1 0 1 0 0
....................................................................................................................................................................................................TCCTGGGGATATTGCAGGCGGCCCC.............................. 25 0 3 0.33 1 0 1 0 0
................................................................................................................................................................................................................................CACTTGTTATTGGGTTGGTCTGTCAAT 27 0 4 0.25 1 0 0 1 0
...............................................................................................................................................................................TAGTCTAGTACTTAAGATAAATCCTGGG................................................ 28 0 20 0.25 5 0 5 0 0
................................................................................................................................................................................................................................CACTTGTTATTGGGTTGGTCTGTCAA. 26 0 5 0.20 1 1 0 0 0
..................................................................................................................................................................................TCTAGTACTTAAGATAAATCCTGGGG............................................... 26 0 20 0.20 4 0 4 0 0
..........................................................................................................................................................................................TTAAGATAAATCCTGGGGATATTGCAG...................................... 27 0 20 0.20 4 0 4 0 0
.......................................................................................................................................................................................TACTTAAGATAAATCCTGGGGATATTG......................................... 27 0 20 0.20 4 4 0 0 0
...............................................................................................................TAATATATATTTGTTGAATCTACTCT.................................................................................................................. 26 0 20 0.20 4 0 4 0 0
...................................................................................................................................................................................................ATCCTGGGGATATTGCAGGCGGCCC............................... 25 0 20 0.15 3 0 3 0 0
.............................................................................................................................TGAATCTACTCTTAAATTAGAGCCT..................................................................................................... 25 0 20 0.15 3 3 0 0 0
..........................................................................................................................................................................................TTAAGATAAATCCTGGGGATATTGC........................................ 25 0 20 0.15 3 0 3 0 0
.........................................................................................................................................TAAATTAGAGCCTAACAACAAGT........................................................................................... 23 0 20 0.15 3 0 3 0 0
................................................................................................................................................................................................TAAATCCTGGGGATATTGCAGG..................................... 22 0 20 0.10 2 0 2 0 0
.............................................................................................................................................TTAGAGCCTAACAACAAGTTTG........................................................................................ 22 0 20 0.10 2 0 0 2 0
........................................................................................................................TTTGTTGAATCTACTCTTAAATTAGAGC....................................................................................................... 28 0 20 0.10 2 2 0 0 0
.............................................................................................................................................TTAGAGCCTAACAACAAGTT.......................................................................................... 20 0 20 0.10 2 0 2 0 0
...................................................................................................................................TACTCTTAAATTAGAGCCTAACAACAAGT........................................................................................... 29 0 20 0.10 2 0 2 0 0
...............................................................................................................................................................................TAGTCTAGTACTTAAGATAAATCCTG.................................................. 26 0 20 0.05 1 0 1 0 0
..............................................................................................................TTAATATATATTTGTTGAATC........................................................................................................................ 21 0 20 0.05 1 0 1 0 0
......................................................................................................................................................................................GTACTTAAGATAAATCCTGGGGA.............................................. 23 0 20 0.05 1 0 1 0 0
.................................................................................................................................................................................................................................ACTTGTTATTGGGTTGGTC....... 19 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................GTCTAGTACTTAAGATAAATCCTGGGGA.............................................. 28 0 20 0.05 1 0 1 0 0
.......................................................................................................................................................................................TACTTAAGATAAATCCTGGGGATATTGCA....................................... 29 0 20 0.05 1 0 1 0 0
..............................................................................................................................................................................................................................ATCACTTGTTATTGGGTTGGTCTGTCA.. 27 0 20 0.05 1 0 1 0 0
..................................................................................................................................................................................TCTAGTACTTAAGATAAATCCTGG................................................. 24 0 20 0.05 1 0 1 0 0
..................................................................................................................TATATATTTGTTGAATCTACTCTTAAAT............................................................................................................. 28 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................GTCTAGTACTTAAGATAAATCCTGGG................................................ 26 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................TAAGATAAATCCTGGGGA.............................................. 18 0 20 0.05 1 0 1 0 0
....................................................................................................................................................................................TAGTACCTAAGATAAATCCTGGGGATAT........................................... 28 1 20 0.05 1 1 0 0 0
....................................................................................................................................................................................TAGCACTTAAGATAAATCCTGGGGATAT........................................... 28 1 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................AGATAAATCCTGGGGATATTGCA....................................... 23 0 20 0.05 1 0 1 0 0
................................................................................................................................................................................................................................CACTTGTTATTGGGTTGGTCTGTC... 24 0 20 0.05 1 0 0 1 0
...............................................................................................................................................................................TAGTCTAGTACTTAAGATAAATCC.................................................... 24 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................................AAATCCTGGGGATATTGCAGGCGGCC................................ 26 0 20 0.05 1 0 0 1 0
.........................................................................................................................TTGTTGAATCTACTCTTAAATTAGA......................................................................................................... 25 0 20 0.05 1 1 0 0 0
........................................................................................................................................TTAAATTAGAGCCTAACAACAAGTTTGA....................................................................................... 28 0 20 0.05 1 1 0 0 0
..........................................................................................................................................................................................................GGATATTGCAGGCGGCCC............................... 18 0 20 0.05 1 0 1 0 0
................................................................................................................................................................................................TAAATCCTGGGGATATTGCAGGC.................................... 23 0 20 0.05 1 0 1 0 0
..................................................................................................................................................................................TCTAGTACTTAAGATAAATCCTGGGGATA............................................ 29 0 20 0.05 1 0 1 0 0
..................................................................................................................................................................................................................................CTTGTTATTGGGTTGGTC....... 18 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

GATAGCTGAATTTTTTGGGTCTACTTTGTTTGACCTTTTGGCATCATTTCCATTCTAAGTTTACTAAGGTCGGGTACCAAAACGGTGTTAAAAAAAAAAAAAAAAATGCAAATTATATATAAACAACTTAGATGAGAATTTAATCTCGGATTGTTGTTCAAACTCTATAATAAGAATCAGATCATGAATTCTATTTAGGACCCCTATAACGTCCGCCGGGGTTAGTGAACAATAACCCAACCAGACAGTTA
*************************************************************************************........((((((((......((((......)))).....))))))))......*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M020
head
 M045
female body
 V119
head
 V117
male body
......................................................................................................................................................................................................................GCCGGGGTTAGTGAACAATAA................ 21 0 3 0.67 2 1 0 1 0
.......................................................................................................................................................................................................................CCGGGGTTAGTGAACAATAAC............... 21 0 3 0.67 2 2 0 0 0
.......................................GGCATCACTTCCATGCTAG................................................................................................................................................................................................. 19 3 3 0.33 1 0 1 0 0
.....................................................................................................................................................................................................................................CAATAACCCAACCAGACAGTTA 22 0 4 0.25 1 0 1 0 0
......................................................................................................................................................................................................................GCCGGGGCTAGTGCACGATA................. 20 3 6 0.17 1 0 0 0 1
.........................................................................................AAAAAAAAAAAAAAAAATTCAAATTGT....................................................................................................................................... 27 2 13 0.08 1 1 0 0 0
........................................GCATCACTTCCATGCTAG................................................................................................................................................................................................. 18 3 13 0.08 1 0 1 0 0
..........................................................................................AAAAAAAAAAAAAAAATTCAAATTGT....................................................................................................................................... 26 2 17 0.06 1 1 0 0 0
........................................................................................................................................AATTTAATCTCGGATTGTTGTTCAAA......................................................................................... 26 0 20 0.05 1 0 1 0 0
...................................................................................................................................................................................GATCATGAATTCTATTTAGGACC................................................. 23 0 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004968:1166387-1166637 + dwi_4099 CTATCGACTTAAAAAACC--------CAGATG----AA---A------CAAACTGGA-------------------AAACCGTAG-----------------------------TAAAGG---------------------------TAAGATTCA-----------AATGATTCC-AGCCCATGGT---T-TT-------------G--CCAC-------AATT-TTTTT-TTTT-TTT-TT--------TACGTTT---AA-----TATATATTTGTTGAATCTACTCTTAA---A----T---TAGAGCCT-AACAACAAGTTTG--AGATATTATTC-TT------------------------A------------------------GTCTAGTACT--TAAGA-----------------TAAATC-----CT----G----------------GGGATATTGC-AGG------CGGCCCC-AAT-CA-CTTGTTATTGG--GT-TGGTC--TGTCAAT
droVir3 scaffold_12100:377770-377829 + GTTT--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--CAAC-------A-AC-TTTTT-TTTG-TTTTTT-T------T--GTAT---TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------T
droMoj3 scaffold_6482:1043876-1044035 - TTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-TTTT-TTTTTT-T------T--TTTC---AA-----TATAGTTTTATTGCAGCTTTTGTCG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------TAAGGGTAC------CTTAACTAGTGGAGTGGCTAAATGC-----CT----TT-A------------------TTGCTG-AAAGTTACTTTAATT-TAG-GT-CACTTCTCAGG--TC-TAGGG--GATGCGA
droGri2 scaffold_6700:2558-2666 - AATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-TTTT-TTT-TT--------TGTATTT---AA-----GATTTTT------------CTCTTTCGA-C----T---GAGG-----GATAGTCGAAATTTAGAATTTTAAAA--ATATTGAATATGAAAATGTATTTTTA-------------A--TT--------------------------------------------------------------------------------------------------------------------------------------TAATA
dp5 Unknown_singleton_1492:25002-25183 + CCAT--AGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-ATTTTTTTTTTTTTTT-T-TT--TTTTTTTTTTTTTT--ATTT---TA--------TTAGAAATCAG--CTTTACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-TT--T------------------TAGTGATATT--TACAT-----------------TGGCTTACTACATATTATA-AGAGTTTAATGATTAGGTTTATATA--T------ACATTTT-AAT-GA-TGTGTTATTCA--GC-AAATT--TTTCTAT
droPer2 scaffold_129:79725-79889 + TTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-T-TT--TTTTTTTTTTTTTT--ATTT---TA--------TTAGAAATCAG--CTTTACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-TT--T------------------TAGTGATATT--TACAT-----------------TGGCTTACTACATATTATA-AGAGTTTAATGATTAGGTTTATATA--T------ACATTTT-AAT-GA-TGTGTTATTCA--GC-AAATT--TTTCTAT
droAna3 scaffold_13228:510823-511032 + TACA--AATAC---------------CAGTTG----TA---A------TAAG---------------------------TT-------------GAAA----------------------------------------------------GTTGTAAT----AAGG------------ATTTAAGT---------------------------TT--------TT-TTTTT-TTTT-TTTTCA--------TACTTTT---AT-----CTTTTATTTTTTGGATCTTCTCTTAT--------T---TAGAGACT-AGCAACAATTTT-AAAAATCTTAATC-TAA----------------------TA-CA--TAATTA--G--TT-------------T----ATCTT-----------------TGTAAA-----CA----TC-T-------------------ATACTATG------GGGCCTCCGAT-------TTCATCGG--GC-TGGAA--GGTCATT
droBip1 scf7180000395759:17641-17866 + AAAA--AATTTAAAT----------A----------AA------ATA---A-AAAAA--A-------------------TT-------------AAAT----------------------------------------------------TAAAAAAA----AACG------------ACCCAAGTCTTCT----------------TTGT---T--------TT-TTTTT-TTTT-TTATTT---------GAACGT---TG-----CTTTTATTTCTTGAATCTTCTCTTT-------------GCGAGACT-AACAAGAGGTGTATCAAATCTTATAT-TCT----------------------TAACT--T------------------ATTTAACAGT--CATAT-----------------TGACTG-----AT----AC-A-------------------GAGTTAGA------CGGCCCT-AAA-AA-TCTATTGCTGG--GT-TGAGA--GGTCGTT
droKik1 scf7180000299125:13732-14003 + CTAGTGAGTTAAAAAAAA---------------------------TA---A-A--TAAATTAACAGTGGCGCCAAA--TTTGTAT-----------------------------TTTTCAATATTTTCAAAATTTTATAGTCTATTCCG-TTTC-----------------GCATT-CATCCAAATCATAT----------------A---------------TA-TATTT-TTTT-TTT-TT--------TAGGTTT---TG-----CTTTTATTTATTGAATTTTCTCATTT------------ATGAGACT-AACAATAAGTGTAACAAATCTTACAA-TAC----------------------TA-CC--T------------------GACTAGCAGT--CATGT-----------------AGACTG-----GT----AC-A-------------------GAGT-AAA------TGGCCCT-GACTCA--TTATGGCTAG--GT-TGGAA--GGTCGTT
droFic1 scf7180000454054:26738-26965 - CTGG--ACTTAAAGAAAAGGGATTT-AATGT----CAAACA-----G----GCT--------------------------------------------------ATGAACATGTTCAAGG---------------------------TAGAGTTGG-----------AG--------------------------------------CCGTAAAA--------CC-TTTTT-TTTT-TTTTTT---------GAGCTT---TA-----TCTTTATTTATTGAATCTTCTCTTG-------------AAGAGACT-TACAATAAGAAT-TCAGATCTTAACC-TATACTG----------TATATTA-----------TTA--A--TTTATATTATTTATTTGT--TATAT-----------------TA--------------------------------------------------------------T-G--TTTATTAATTG--GT-CGATAGCCCTCAAT
droEle1 scf7180000486489:3345-3577 + GACA--ATACAAAAC----------A----------AAAAA-------------------------CGGCAACAAA---CT-------------ACAA----------------------------------------------------CACACAGC----AGAA------------GCACATGTT---TTTT-------------T--TAA----------TT--T-TTTT-TT-TTTTTT-T------T--ACTT---TATTGTCATTTTATTTATTGAATCTTCTCTGAA------------TTGAGACT-AACAATAAGTATATAAAATCTTAAAT-TAA----------------------AAAGCTAT------------------ATCTGACAGT--CAAGT-----------------TGACTG-----AC----GC-G-------------------GGATGTAA------GGGCTCT-AAT-AA--CTATTGCTGA--GC-TGGAA--GGTCATT
droRho1 scf7180000776711:9850-10089 - CGATT----CAAAAC--------------------CGAAGA-----GGTAAAAGAGA-------------------ATGCTTGAG-----------------------------TCACTG---------------------------TCAGGACCAGATCAG-------------------CAAGGCTTAT----------------TTATAAAT--------CT-TTTTT-TTTG-TTACTA---------AAGCTT---GG-----TTTTTATTTATTGGATCTTCTCTTT-------------ATGAGTCT-AACAATAAAGTT-GCAAATCTTAAAA-TAA----------------------TACAT--T------------------ATCTAACAGTTTAATTT-----------------TAACTG-----AA----TA-G-------------------AGACTACA------TGGTCCT-AAT-AA--TTAGCGCTGG--AT-TGGAA--GGTCGTT
droBia1 scf7180000299434:22117-22382 + TCGA--AATAA-GAGAC--------AGT--AAGG--AC---A------CAAAAAGCA-------------------AAACAACAGTAAAGTG-------------------------------------------------------------CCTT---------AAATGTG-GCTAACGC-----------GGCCACAGAGTTAATTACAATT--------AA-TTTCT-TTTTTTGTGAT--------T--ATAT---AT-----GCATTATTTATTGAATATTCTCTTGT------------ATGAGACT-AACAATAAGTATATGAAATCTTAAGAATAT-----------AAATTTATTATTA-------------A--TTTA--TTAATTATTTAT--TATAT-----------------AGACTG-----AA----TT-T-------------------AGCT---A------GGGCCTT-AAT-AA--TTATTGCTGG--GC-TGGCA--GATCGTT
droTak1 scf7180000415692:2889-3080 + TTCT--AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTGGCACCTTTT-------------T--TAAT-------AACT--T-TTTT-TTTTTTGTA--------TACGTTT---GC-----ATTTTATTTATTGGATCTTCTCTGAA------------TTGAGACT-AACAATAAGTATATAAAATCATAAAT-TAA----------------------AAAAC--T------------------ATCTAACAGT--CATGA-----------------TGACTG-----AC----GC-G-------------------AGATAAAA------GGGCTCT-AAT-AA--CTATTGCTGA--GC-TGGAA--GGTCATT
droEug1 scf7180000405479:2321-2540 + AAAA--GCTTAAAAT----------AAT-------C--AAA---CTG--AAAAAATA-------------------ATGTAA--------------------------------------------------------------------TAATAA------------------------------------------------TAATAATAATA--------AA-TTTTT-TTCT-TTTATA---------TAGCTT---TG-----CTTTTATTTATTGAATATACTCTTAA---T----T---TTGAGACT-AACAGTAAGTTG-ACGAATCTTAACA-TTA----------------------AAATT--T------------------AACTAACAGT--ATACT----------------AAGACTG-----CA----TT-C------------------TGGGTG-AG------CCTCCCT-CAG-G--TCGGTCGCTGG--GT-GGGTA--AGTCATT
dm3 chr2RHet:6454-6712 - CAACTCAAT---------------------TAAGCC-----AAACTG---A-ACAAA--A-------------------TGATTTTGACGAACTTAAACAAATGA--------------------------------------------TGAAACAA-----------TT--------------------------AATAGCCCAAATGACAAAT--------AT-TTTTT-TTTT-TTTTTT-T------T--ACTT---TG-----CTTTTATTTATTGAATCTTCTTGTA-------------TAAGAACT-AACAATAAGTTT-GAAAATCTTAACT--ATAA---------CAA-GT-------ATT--T--TTTGAACAGTTG----TATTAT------TTTTC-----------------CAACTG-----TT----CT-A-------------------TGATTAAA------CGGCCCT-AAT-AATTTATTCGCTGG--GT-TGGTA--GGTCCTT
droSim2 node_42303:5327-5507 + TTTT--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--ATA--------ATTGTATTT-T-TA-TTTTTT-T------T--TCCATGTTT-----TGCTTATTTATTGAATCTGCCCTTTTAC-T----T---AAGAGACT-AACAATAAGTTT-TCAAATCTTATTC-TGAAC--------------------TA-TC--T------------------AAATATCAT---TTTAT-----------------GGAATG-----AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAACGCTGG--GC-TGGTT--GGTCGTT
droSec2 scaffold_46:51248-51459 - ATTA--AACT----------------------------------------TA-----------------------------------------------------------------TTG---------------------------CAAGTTCTTATTCAATAAG------------AT---------------------------TCAAAAAA--------TA-TATTT-TTTT-TTTTCT--------TA-ACTT-A-TT-----GGGTTATTTATTGGATCTTCTCTTTT--------T---GTGAGACT-AACAATAATTAT-TCAAATCTTATTA-TTT----------------------AA-CT--T-------------A----TATTAATTAC--AATGT--------GAA-----GTAATTG-----TA----TTAG-------------------TTAG-AGA------CGGCCCT-AGG-AT-TTCTTTGCTGG--GC-TGGAG--AATCTTT
droYak3 v2_chr3h_random_002:347795-348048 + AACG--CTGT--------------------TG----GA---A------AATAACGCT-------------------AAACCGTGG-----------------------------CATTTG---------------------------TCAGCTCCTG----------AATGGCAGC-AACCCTA------T-TTGCCACAA------A---TAT-GTTTTTTTTTTTTTTT-T-TT-TTTTTT-T------T--GCTTTTTTT-----TTATTATTTATTGAATCTTCCCTTTGTG-T----T---AAGAGACT-AACAATAAGTGT-TCAAATCTTAATC-TA------------------------A-CT--T------------------AATTAACTTT--CACTT-----------------AG---------------------------TGATAGTTTTTTCATT--A------ATGCCCT-AAT-AAGTTTATTGCTGG--GC-TGGGA--GGTCGTT
droEre2 scaffold_4929:23554114-23554278 - ATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TTATTTTTTTT--------T--ACCC---TT-----CTTTTAATTATTGAATCTTCTCAATT------------TCGAGACT-AACAATAAGTGTATCAAATCTTATAC-TAT----------------------AA-CC--T------------------AATTAGCAGT--CATGT-----------------AGGCTG-----GA----TC-T-------------------GTAAAAAT------GGCCCCT-GAA-AA--TTATGGCTTATGACAAAGTC--GGTGTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CTATCGACTTAAAAAACC--------CAGATG----AA---A------CAAACTGGA-------------------AAACCGTAG-----------------------------TAAAGG---------------------------TAAGATTCA-----------AATGATTCC-AGCCCATGGT---T-TT-------------G--CCAC-------AATT-TTTTT-TTTT-TTT-TT--------TACGTTT---AA-----TATATATTTGTTGAATCTACTCTTAA---A----T---TAGAGCCT-AACAACAAGTTTG--AGATATTATTC-TT------------------------A------------------------GTCTAGTACT--TAAGA-----------------TAAATC-----CT----G----------------GGGATATTGC-AGG------CGGCCCC-AAT-CA-CTTGTTATTGG--GT-TGGTC--TGTCAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................TACT--TAAGA-----------------TAAATC-----CT----G----------------GGGATAT..........................................................252024.354870004870
.............................................................................................................................................................................................................................................................................................................................................................................................................AGTACT--TAAGA-----------------TAAATC-----CT----G----------------GGGATAT..........................................................27201.7535000350
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTACT--TAAGA-----------------TAAATC-----CT----G----------------GGGA.............................................................27201.0020000200
.TATCGACTTAAAAAACC--------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..ATCGACTTAAAAAACC--------CAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
......................................................GGA-------------------AAACCGTAG-----------------------------TAAAGG---------------------------A..........................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
...................................................ACTGGA-------------------AAACCGTAG-----------------------------TAAAGG---------------------------T..........................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................TAGTACT--TAAGA-----------------TAAATC-----CT----G----------------GGGATA...........................................................27200.8517000170
..............................................................................................................................................................................................................................................................................................................T---TAGAGCCT-AACAACAAGTTTG--AGA.................................................................................................................................................................................................25200.7014040100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATC-----CT----G----------------GGGATATTGC-AGG------CGG..........................................25200.6012012000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TAAGA-----------------TAAATC-----CT----G----------------GGGATATTGC-......................................................24200.5010010000
................................................................................................................................................................................................................................................................................................TCTTAA---A----T---TAGAGCCT-AACAACAAGTT........................................................................................................................................................................................................27200.40800080
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TC-----CT----G----------------GGGATATTGC-AGG------CGGCCC.......................................24200.35700070
..............................................................................................................................................................................................................................................................................................................T---TAGAGCCT-AACAACAAGTTTG--AGATA...............................................................................................................................................................................................27200.35700070
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATTGC-AGG------CGGCCCC-.....................................1930.33101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TC-----CT----G----------------GGGATATTGC-AGG------CGGCCCC-.....................................2530.33101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-CTTGTTATTGG--GT-TGGTC--TGTCAAT2740.25100100
.......................................................................................................................................................................................................................................................................................................................................................T------------------------A------------------------GTCTAGTACT--TAAGA-----------------TAAATC-----CT----G----------------GG...............................................................28200.25505000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-CTTGTTATTGG--GT-TGGTC--TGTCAA.2650.20100010
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTACT--TAAGA-----------------TAAATC-----CT----G----------------GGG..............................................................26200.20404000
..................................................................................................................................................................................................................................................................................................................................................................................................................T--TAAGA-----------------TAAATC-----CT----G----------------GGGATATTGC-AG....................................................27200.20404000
...............................................................................................................................................................................................................................................................................................................................................................................................................TACT--TAAGA-----------------TAAATC-----CT----G----------------GGGATATTG........................................................27200.20400040
.................................................................................................................................................................................................................................................................T---AA-----TATATATTTGTTGAATCTACTCT...........................................................................................................................................................................................................................................26200.20404000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-----CT----G----------------GGGATATTGC-AGG------CGGCCC.......................................25200.15303000
.......................................................................................................................................................................................................................................................................................TGAATCTACTCTTAA---A----T---TAGAGCCT-...................................................................................................................................................................................................................25200.15300030
..................................................................................................................................................................................................................................................................................................................................................................................................................T--TAAGA-----------------TAAATC-----CT----G----------------GGGATATTGC-......................................................25200.15303000
...................................................................................................................................................................................................................................................................................................TAA---A----T---TAGAGCCT-AACAACAAGT.........................................................................................................................................................................................................23200.15303000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATC-----CT----G----------------GGGATATTGC-AGG------.............................................22200.10202000
..............................................................................................................................................................................................................................................................................................................T---TAGAGCCT-AACAACAAGTTTG--....................................................................................................................................................................................................22200.10200200
..................................................................................................................................................................................................................................................................................TTTGTTGAATCTACTCTTAA---A----T---TAGAGC......................................................................................................................................................................................................................28200.10200020
..............................................................................................................................................................................................................................................................................................................T---TAGAGCCT-AACAACAAGTT........................................................................................................................................................................................................20200.10202000
.............................................................................................................................................................................................................................................................................................TACTCTTAA---A----T---TAGAGCCT-AACAACAAGT.........................................................................................................................................................................................................29200.10202000
.......................................................................................................................................................................................................................................................................................................................................................T------------------------A------------------------GTCTAGTACT--TAAGA-----------------TAAATC-----CT----G----------------.................................................................26200.05101000
................................................................................................................................................................................................................................................................TT---AA-----TATATATTTGTTGAATC.................................................................................................................................................................................................................................................21200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTACT--TAAGA-----------------TAAATC-----CT----G----------------GGGA.............................................................23200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CTTGTTATTGG--GT-TGGTC--.......19200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................GTCTAGTACT--TAAGA-----------------TAAATC-----CT----G----------------GGGA.............................................................28200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................TACT--TAAGA-----------------TAAATC-----CT----G----------------GGGATATTGC-A.....................................................29200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-CA-CTTGTTATTGG--GT-TGGTC--TGTCA..27200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTACT--TAAGA-----------------TAAATC-----CT----G----------------G................................................................24200.05101000
............................................................................................................................................................................................................................................................................TATATATTTGTTGAATCTACTCTTAA---A----T---............................................................................................................................................................................................................................28200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................GTCTAGTACT--TAAGA-----------------TAAATC-----CT----G----------------GG...............................................................26200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................TAAGA-----------------TAAATC-----CT----G----------------GGGA.............................................................18200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGA-----------------TAAATC-----CT----G----------------GGGATATTGC-A.....................................................23200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-CTTGTTATTGG--GT-TGGTC--TGTC...24200.05100100
.......................................................................................................................................................................................................................................................................................................................................................T------------------------A------------------------GTCTAGTACT--TAAGA-----------------TAAATC-----C.......................................................................................24200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAATC-----CT----G----------------GGGATATTGC-AGG------CGGCC........................................26200.05100100
...................................................................................................................................................................................................................................................................................TTGTTGAATCTACTCTTAA---A----T---TAGA........................................................................................................................................................................................................................25200.05100010
..................................................................................................................................................................................................................................................................................................TTAA---A----T---TAGAGCCT-AACAACAAGTTTG--A...................................................................................................................................................................................................28200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATTGC-AGG------CGGCCC.......................................18200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATC-----CT----G----------------GGGATATTGC-AGG------C............................................23200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTACT--TAAGA-----------------TAAATC-----CT----G----------------GGGATA...........................................................29200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTTATTGG--GT-TGGTC--.......18200.05100010
droVir3
GTTT--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--CAAC-------A-AC-TTTTT-TTTG-TTTTTT-T------T--GTAT---TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------TSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................T------T--GTAT---TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-..............2612.002000000000000000000000000001000000000100000000000000000000000000
.....................................................................................................................................................................................................................................TT-TTTG-TTTTTT-T------T--GTAT---TA-----ATTTGG............................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTTT-TTTG-TTTTTT-T------T--GTAT---TA-----ATTTG.............................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................T------T--GTAT---TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-T.............2711.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................T-T------T--GTAT---TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG....................2411.001000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................T-T------T--GTAT---TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--G................2611.001000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................TTTG-TTTTTT-T------T--GTAT---TA-----ATTTGGT...........................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................TG-TTTTTT-T------T--GTAT---TA-----ATTTGGT...........................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................TTT-TTTG-TTTTTT-T------T--GTAT---TA-----A.................................................................................................................................................................................................................................................................2211.001000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------.25200.6513000000000000200000000000003000002006000000000000000000000000000
.....................................................................................................................................................................................................................................................................TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------T26200.6012000000000000000000000003106000000002000000000000000000000000000
.....................................................................................................................................................................................................................................................................TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGG...........23200.408000000000000000000000005000100001000010000000000000000000000000
.....................................................................................................................................................................................................................................................................TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-..............20200.357000000010000000000000002003010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGA..........24200.306000000000000000000000001002000001001100000000000000000000000000
................................................................................................................................................................................................................................................................AT---TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-T.............2380.131000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TG............22200.102000000000000000000000001100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------A26200.102000000000000000000000000001000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------.22200.102000000000000000000000000001100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------.21200.102000000000000000000000000100100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--G................19200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................A-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------.24200.051000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-T.............21200.051000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-..............15200.051000000000000000000000000000000000000000000100000000000000000000
..............................................................................................................................................................................................................................................................................TTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------A22200.051000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TG............18200.051000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................T---TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------.26200.051000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------T23200.051000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................T---TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-TGGAA--------T27200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................T---TA-----ATTTGGTTTATT----T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--GC-..............21200.051000000100000000000000000000000000000000000000000000000000000000
droMoj3
TTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-TTTT-TTTTTT-T------T--TTTC---AA-----TATAGTTTTATTGCAGCTTTTGTCG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------TAAGGGTAC------CTTAACTAGTGGAGTGGCTAAATGC-----CT----TT-A------------------TTGCTG-AAAGTTACTTTAATT-TAG-GT-CACTTCTCAGG--TC-TAGGG--GATGCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-AAAGTTACTTTAATT-TAG-GT-CAC...........................2417.007400030
..................................................................................................................................................................................................................................................................................................TCG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------TA...................................................................................................................................2523.006500001
..................................................................................................................................................................................................................................................................................................TCG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------TAAGG................................................................................................................................2823.006600000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAC------CTTAACTAGTGGAGTGGCTAAA................................................................................................2532.337700000
..................................................................................................................................................................................................................................................................................................TCG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------TAAG.................................................................................................................................2721.503300000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAC------CTTAACTAGTGGAGTGGCT...................................................................................................2231.334200020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-AAAGTTACTTTAATT-TAG-GT-CACT..........................2511.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................T-A------------------TTGCTG-AAAGTTACTTTAATT-TAG-G................................2711.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAC------CTTAACTAGTGGAGTGG.....................................................................................................2031.003300000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-AAAGTTACTTTAATT-TAG-G................................2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-AAAGTTACTTTAATT-TAG-GT-CAC...........................2511.001100000
...............................................................................................................................................................................................................................................................................................TTGTCG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------T....................................................................................................................................2721.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAC------CTTAACTAGTGGAGTGGCTAA.................................................................................................2431.003300000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAACTAGTGGAGTGGCTAAATGC-----CT----..................................................................................2530.672200000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAC------CTTAACTAGTGGAGTGGC....................................................................................................2130.672100010
...............................................................................................................................................................................................................................................................................................................................................................................................................TAC------CTTAACTAGTGGAGTGGCTA..................................................................................................2330.672200000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAC------CTTAACTAGTGGAGTGGCTAAATG..............................................................................................2730.672200000
...................................................................................................................................................................................................................................................................................................CG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------TAAGGG...............................................................................................................................2820.501100000
.........................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGTAC------CTTAACTAGTGGAGTGGC....................................................................................................2720.501000001
.........................................................................................................................................................................................................................................................................................................AAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------TAAG.................................................................................................................................2320.501010000
.............................................................................................................................................................................................................................................................................................TTTTGTCG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------T....................................................................................................................................2920.501100000
..................................................................................................................................................................................................................................................................................................................................................................................TT--A------------------TAAGGGTAC------CTTAACTAGTGGA.........................................................................................................2520.501000010
..................................................................................................................................................................................................................................................................................................................................................................................TT--A------------------TAAGGGTAC------CTTAACTAGTGGAG........................................................................................................2620.501100000
.........................................................................................................................................................................................................................................................................................................AAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------TAAGGG...............................................................................................................................2520.501100000
..................................................................................................................................................................................................................................................................................................TCG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-TT--A------------------T....................................................................................................................................2420.501100000
................................................................................................................................................................................................................................................................................................................................................................................................................AC------CTTAACTAGTGGAGTGGCTAAAA...............................................................................................2530.331100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAACTAGTGGAGTGGCTAAATGC-----CT----TT-...............................................................................2830.331000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAACTAGTGGAGTGGCTAAATGC-----CT----T.................................................................................2630.331100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAACTAGTGGAGTGGCTAAATGC-----CT----T.................................................................................2730.331010000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAC------CTTAACTAGTGGAGTGGCTAAAT...............................................................................................2630.331100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAACTAGTGGAGTGGCTAAATGC-----........................................................................................2430.331000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................AACTAGTGGAGTGGCTAAATGC-----CT----..................................................................................2430.331000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAACTAGTGGAGTGGCTAAATGC-----A.......................................................................................2430.331100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AACTAGTGGAGTGGCTAAATGC-----CT----TT-A------------------............................................................2730.331100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CACTTCTCAGG--TC-TAGGG--GATGCG.2580.252100001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAG-GT-CACTTCTCAGG--TC-TAGGG--GA.....2780.131100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG-GT-CACTTCTCAGG--TC-TAGGG--GATT...2780.131100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG-GT-CACTTCTCAGG--TC-TAGGG--GATG...2780.131100000
.............................................................................................................................................................................................................................................................................................TTTTGTCG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-............................................................................................................................................................25100.101100000
..............................................................................................................................................................................................................................................................................TAGTTTTATTGCAGCTTTTGTCG---......................................................................................................................................................................................................................................23100.101000001
.............................................................................................................................................................................................................................................................................................TTTTGTCG---TAAACTCTAT---GGCGCA-----------------------------------------------------T-TT--C------------------.....................................................................................................................................28100.101100000
...................................................................................................................................................................................................................................................................................TTATTGCAGCTTTTGTCG---TAAA..................................................................................................................................................................................................................................22120.081100000
................................................................................................................................................................................................................................................................................GTTTTATTGCAGCTTTTGTCG---......................................................................................................................................................................................................................................21140.071000001
droGri2
AATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-TTTT-TTT-TT--------TGTATTT---AA-----GATTTTT------------CTCTTTCGA-C----T---GAGG-----GATAGTCGAAATTTAGAATTTTAAAA--ATATTGAATATGAAAATGTATTTTTA-------------A--TT--------------------------------------------------------------------------------------------------------------------------------------TAATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
CCAT--AGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-ATTTTTTTTTTTTTTT-T-TT--TTTTTTTTTTTTTT--ATTT---TA--------TTAGAAATCAG--CTTTACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-TT--T------------------TAGTGATATT--TACAT-----------------TGGCTTACTACATATTATA-AGAGTTTAATGATTAGGTTTATATA--T------ACATTTT-AAT-GA-TGTGTTATTCA--GC-AAATT--TTTCTATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................TTTTTTTTTTTTTT-T-TT--TT..............................................................................................................................................................................................................................................................................................19207.95159015900000000
.........................................................................................................................................................................................................................TTTTTTTTTTTTTT-T-TT--T...............................................................................................................................................................................................................................................................................................18205.40108010800000000
.......................................................................................................................................................................................................................ATTTTTTTTTTTTTTT-T-TT--TT..............................................................................................................................................................................................................................................................................................21202.5551030174000000
.......................................................................................................................................................................................................................ATTTTTTTTTTTTTTT-T-TT--T...............................................................................................................................................................................................................................................................................................20202.304604500000100
...............................................................................................................................................................................................................................TTTTTTTT-T-TT--TTTTTTTTTTT.....................................................................................................................................................................................................................................................................................22201.953903900000000
..............................................................................................................................................................................................................................TTTTTTTTT-T-TT--TTTTTTTTTT......................................................................................................................................................................................................................................................................................22201.953903900000000
........................................................................................................................................................................................................................TTTTTTTTTTTTTTT-T-TT--TTT.............................................................................................................................................................................................................................................................................................21201.603200320000000
...............................................................................................................................................................................................................................TTTTTTTT-T-TT--TTTTTTTT........................................................................................................................................................................................................................................................................................19201.402800028000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T--TACAT-----------------TGGCTTACTACATATTA..................................................................................23121.33160900000700
....................................................................................................................................................................................................................................TTT-T-TT--TTTTTTTTTTTTT...................................................................................................................................................................................................................................................................................19201.002000200000000
.......................................................................................................................................................................................................................ATTTTTTTTTTTTTTT-T-TT--TTTTTTTTTTTTT...................................................................................................................................................................................................................................................................................3221.0020000002000
.....................................................................................................................................................................................................................................TT-T-TT--TTTTTTTTTTTTTT--................................................................................................................................................................................................................................................................................19201.002000200000000
......................................................................................................................................................................................................................................................................................TCAG--CTTTACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-TT--........................................................................................................................................................28100.5050500000000
.......................................................................................................................................................................................................................ATTTTTTTTTTTTTTT-T-TT--................................................................................................................................................................................................................................................................................................19200.501000100000000
.......................................................................................................................................................................................................................ATTTTTTTTTTTTTTT-T-TT--TTTTTTTTTTTT....................................................................................................................................................................................................................................................................................3120.5010000001000
...................................................................................................................................................................................................................................TTTT-T-TT--TTTTTTTTTTTTTT--................................................................................................................................................................................................................................................................................21200.3570000000070
..................................................................................................................................................................................................................................TTTTT-T-TT--TTTTTTTTTTTTT...................................................................................................................................................................................................................................................................................21200.3570000000070
.................................................................................................................................................................................................................................TTTTTT-T-TT--TTTTTTTTTTTT....................................................................................................................................................................................................................................................................................21200.3570000000070
..........................................................................................................................................................................................................................TTTTTTTTTTTTT-T-TT--TTTTTT..........................................................................................................................................................................................................................................................................................22200.3060006000000
.................................................................................................................................................................................................................................................................................................................T---GATCTA-----------------------------------------------------A-TT--T------------------TAGTGATATT--TACAT-----------------...................................................................................................26110.2730000000300
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATGATTAGGTTTATATA--T------ACAT.........................................26120.2530000000300
.....................................................................................................................................................................................................................................................................................................................................................................................................................TACAT-----------------TGGCTTACTACATATTA..................................................................................22120.2530300000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T--TACAT-----------------TGGCTTACTACATATTATA-...............................................................................25120.2530100000200
............................................................................................................................................................................................................................TTTTTTTTTTT-T-TT--TTTTTTTT........................................................................................................................................................................................................................................................................................22200.2550050000000
.............................................................................................................................................................................................................................TTTTTTTTTT-T-TT--TTTTTTTTT.......................................................................................................................................................................................................................................................................................22200.2550050000000
.......................................................................................................................................................................................................................ATTTTTTTTTTTTTTT-T-TT--TTTTT...........................................................................................................................................................................................................................................................................................24200.2040220000000
................................................................................................................................................................................................................................................................................TAGAAATCAG--CTTTACTTA---AA----CTA.............................................................................................................................................................................................................................24150.2030000000300
...............................................................................................................................................................................................................................................................................................TACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-TT--T------------------TAG..................................................................................................................................25100.2020200000000
.................................................................................................................................................................................................................................TTTTTT-T-TT--TTTTTTTTTTTTTT--................................................................................................................................................................................................................................................................................23200.2040040000000
.........................................................................................................................................................................................................................TTTTTTTTTTTTTT-T-TT--TTTTTTTTTTTTTT--AC..............................................................................................................................................................................................................................................................................3350.2010000100000
...................................................................................................................................................................................................................................................................................................................................................................................T--T------------------TAGTGATATT--TACAT-----------------TGGCTTAC...........................................................................................25110.1820200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTACATATTATA-AGAGTTTAATGA...................................................................27110.1820100000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATATTATA-AGAGTTTAATGAT..................................................................24110.1820200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T--TACAT-----------------TGGCTTACTACATATTATA-AG.............................................................................27110.1820100100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TACAT-----------------TGGCTTACTACATATTATA-...............................................................................24120.1720200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TATT--TACAT-----------------TGGCTTACTACATATTA..................................................................................26120.1720200000000
......................................................................................................................................................................................................................................................................................TCAG--CTTTACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-............................................................................................................................................................26130.1520200000000
......................................................................................................................................................................................................................................................................................................................................................................................T------------------TAGTGATATT--TACAT-----------------TGGCTTACT..........................................................................................25130.1520200000000
..................................................................................................................................................................................................................................TTTTT-T-TT--TTTTTTTTTTTTTT--................................................................................................................................................................................................................................................................................22200.1530000000030
....................................................................................................................................................................................................................................TTT-T-TT--TTTTTTTTTTTTTT--................................................................................................................................................................................................................................................................................20200.1530000003000
.....................................................................................................................................................................................................................................................................TA--------TTAGAAATCAG--CTTTACTTA---AA----CTA.............................................................................................................................................................................................................................27140.1420200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T--TACAT-----------------TGGCTTACTACATATT...................................................................................22150.1320110000000
......................................................................................................................................................................................................................................................................................TCAG--CTTTACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-TT--T------------------.....................................................................................................................................29100.1010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATA-AGAGTTTAATGATTAGGTT............................................................26100.1010100000000
..................................................................................................................................................................................................................................TTTTT-T-TT--TTTTTTTTTTT.....................................................................................................................................................................................................................................................................................19200.1020000000020
...........................................................................................................................................................................................................................................................T--ATTT---TA--------TTAGAAATCAG--CTTTACTTA---......................................................................................................................................................................................................................................27100.1010010000000
.........................................................................................................................................................................................................................TTTTTTTTTTTTTT-T-TT--TTTT............................................................................................................................................................................................................................................................................................21200.1020000000200
............................................................................................................................................................................................................................TTTTTTTTTTT-T-TT--TTTTTTTTTTTTTT--................................................................................................................................................................................................................................................................................28200.1020110000000
...............................................................................................................................................................................................................................................................................................TACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-TT--T------------------.....................................................................................................................................22100.1010100000000
............................................................................................................................................................................................................................TTTTTTTTTTT-T-TT--TTTTTTTTTT......................................................................................................................................................................................................................................................................................24200.1020200000000
...................................................................................................................................................................................................................................TTTT-T-TT--TTTTTTTTTTTT....................................................................................................................................................................................................................................................................................19200.1020000000020
...........................................................................................................................................................................................................................................................T--ATTT---TA--------TTAGAAATCAG--CTTTACT...........................................................................................................................................................................................................................................25100.1010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATA-AGAGTTTAATGATTAGGT.............................................................23100.1010100000000
.......................................................................................................................................................................................................................ATTTTTTTTTTTTTTT-T-TT--TTTTTT..........................................................................................................................................................................................................................................................................................25200.1020110000000
...............................................................................................................................................................................................................................................................................................TACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-TT--T------------------T....................................................................................................................................23100.1010100000000
.......................................................................................................................................................................................................................ATTTTTTTTTTTTTTT-T-TT--TTTT............................................................................................................................................................................................................................................................................................23200.1020020000000
...................................................................................................................................................................................................................................................................................................................................................................................T--T------------------TAGTGATATT--TACAT-----------------TGGCTTA............................................................................................24110.0910010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTACATATTATA-AGAGTTTAATGAT..................................................................28110.0910100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------TGGCTTACTACATATTATA-AGAGA..........................................................................25110.0910100000000
.........................................................................................................................................................................................................................................................................................................................TA-----------------------------------------------------A-TT--T------------------TAGTGATATT--TACAT-----------------TGGCT..............................................................................................26110.0910100000000
...................................................................................................................................................................................................................................................................................................................................................................................T--T------------------TAGTGATATT--TACAT-----------------TGGCTTACT..........................................................................................26110.0910100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TACAT-----------------TGGCTTACTACATATTATA-AGAGT..........................................................................29110.0910000001000
...............................................................................................................................................................................................................................................................................................TACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-TT--T------------------TAA..................................................................................................................................25120.0810100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-AGAGTTTAATGATTAGGT.............................................................20120.0810100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------ACATTTT-AAT-GA-TGTGTTATTCA--GC-..............26120.0810100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ACAT-----------------TGGCTTACTACATATTA..................................................................................21120.0810100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGATTAGGTTTATATA--T------ACATTT.......................................26120.0810000000100
..................................................................................................................................................................................................................................................................................................................................................................................................................T--TACAT-----------------TGGCTTACTACATATTATA-A..............................................................................26120.0810100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TAGTGATATT--TACAT-----------------TGGCTTACT..........................................................................................24130.0810100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TAGTGATATT--TACAT-----------------TGGCTTACTACA.......................................................................................27130.0810100000000
.......................................................................................................................................................................................................................................................................................CAG--CTTTACTTA---AA----CTAT---GATCT....................................................................................................................................................................................................................23130.0810100000000
......................................................................................................................................................................................................................................................................................TCAG--CTTTACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-T...........................................................................................................................................................27130.0810100000000
......................................................................................................................................................................................................................................................................................TCAG--CTTTACTTA---AA----CTAT---GATCT....................................................................................................................................................................................................................24130.0810100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTAGGTTTATATA--T------ACATTT.......................................23140.0710100000000
.............................................................................................................................................................................................................................................................................................TTTACTTA---AA----CTAT---GATCTA-----------------------------------------------------..............................................................................................................................................................20140.0710100000000
......................................................................................................................................................................................................................................................................................TCAG--CTTTACTTA---AA----CTAT---GA.......................................................................................................................................................................................................................21140.0710000000100
................................................................................................................................................................................................................................................................................TAGAAATCAG--CTTTACTTA---AA----CTAT---GA.......................................................................................................................................................................................................................27140.0710100000000
........................................................................................................................................................................................................................................................................................AG--CTTTACTTA---AA----CTAT---GAT......................................................................................................................................................................................................................20140.0710100000000
.....................................................................................................................................................................................................................................................................TA--------TTAGAAATCAG--CTTTACTTA---AA----CT..............................................................................................................................................................................................................................26150.0710100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTTTATATA--T------ACATTTT-AAT-GA-..............................25150.0710100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTTTATATA--T------ACATTTT-AAT-GA-A.............................27150.0710100000000
...............................................................................................................................................................................................................................................................................TTAGAAATCAG--CTTTACTTA---AA----CT..............................................................................................................................................................................................................................24160.0610100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTTTATATA--T------ACATTTT-AAT-GA-AA............................28160.0610100000000
......................................................................................................................................................................................................................................................................A--------TTAGAAATCAG--CTTTACTTA---AA----C...............................................................................................................................................................................................................................24160.0610100000000
......................................................................................................................................................................................................................................................................A--------TTAGAAATCAG--CTTTACTTA---......................................................................................................................................................................................................................................21190.0510010000000
...............................................................................................................................................................................................................................................................................TTAGAAATCAG--CTTTACTTA---......................................................................................................................................................................................................................................20190.0510100000000
.........................................................................................................................................................................................................................TTTTTTTTTTTTTT-T-TT--................................................................................................................................................................................................................................................................................................17200.0510000000010
.....................................................................................................................................................................................................................C-ATTTTTTTTTTTTTTT-T-TT--................................................................................................................................................................................................................................................................................................20200.0510100000000
..........................................................................................................................................................................................................................TTTTTTTTTTTTT-T-TT--TTTTTTTTTTTT....................................................................................................................................................................................................................................................................................28200.0510100000000
............................................................................................................................................................................................................................TTTTTTTTTTT-T-TT--TTTTTTTTTTT.....................................................................................................................................................................................................................................................................................25200.0510100000000
.........................................................................................................................................................................................................................TTTTTTTTTTTTTT-T-TT--TTTTTTT.........................................................................................................................................................................................................................................................................................24200.0510010000000
............................................................................................................................................................................................................................TTTTTTTTTTT-T-TT--TTTTTTTTT.......................................................................................................................................................................................................................................................................................23200.0510000000010
...............................................................................................................................................................................................................................TTTTTTTT-T-TT--TTTTTTTTTT......................................................................................................................................................................................................................................................................................21200.0510000010000
.....................................................................................................................................................................................................................C-ATTTTTTTTTTTTTTT-T-TT--T...............................................................................................................................................................................................................................................................................................21200.0510001000000
.....................................................................................................................................................................................................................................TT-T-TT--TTTTTTTTTTTTTT--AT..............................................................................................................................................................................................................................................................................21200.0510001000000
..................................................................................................................................................................................................................................TTTTT-T-TT--TTTTTTTTTTTTTT--A...............................................................................................................................................................................................................................................................................23200.0510100000000
...........................................................................................................................................................................................................................TTTTTTTTTTTT-T-TT--TTTTTTTTTTTTT...................................................................................................................................................................................................................................................................................28200.0510100000000
................................................................................................................................................................................................................................TTTTTTT-T-TT--TTTTTTTTTTTTTT--................................................................................................................................................................................................................................................................................24200.0510000000010
..........................................................................................................................................................................................................................................TT--TTTTTTTTTTTTTT--ATTT---.........................................................................................................................................................................................................................................................................20200.0510001000000
.............................................................................................................................................................................................................................TTTTTTTTTT-T-TT--TTTTTTTTTTTT....................................................................................................................................................................................................................................................................................25200.0510100000000
........................................................................................................................................................................................................................TTTTTTTTTTTTTTT-T-TT--TTTTTTT.........................................................................................................................................................................................................................................................................................25200.0510010000000
..............................................................................................................................................................................................................................TTTTTTTTT-T-TT--TTTTTTTTTTTTT...................................................................................................................................................................................................................................................................................25200.0510100000000
droPer2
TTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-T-TT--TTTTTTTTTTTTTT--ATTT---TA--------TTAGAAATCAG--CTTTACTTA---AA----CTAT---GATCTA-----------------------------------------------------A-TT--T------------------TAGTGATATT--TACAT-----------------TGGCTTACTACATATTATA-AGAGTTTAATGATTAGGTTTATATA--T------ACATTTT-AAT-GA-TGTGTTATTCA--GC-AAATT--TTTCTATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-T-TT--TTTTTTTTTT......................................................................................................................................................................................................................................................................................19200.306060000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTATATA--T------ACATTTT-AAT-GA-..............................24100.101010000
............................................................................................................................................................................................................................................................................................CTTTACTTA---AA----CTAT---GATCTA-----------------------------------------------------..............................................................................................................................................................21130.081010000
...............................................................................................................................................................................................................................................................................TTAGAAATCAG--CTTTACTTA---A.....................................................................................................................................................................................................................................21140.071010000
................................................................................................................................................................................................................................................................................TAGAAATCAG--CTTTACTTA---AA----A...............................................................................................................................................................................................................................22150.071010000
droAna3
TACA--AATAC---------------CAGTTG----TA---A------TAAG---------------------------TT-------------GAAA----------------------------------------------------GTTGTAAT----AAGG------------ATTTAAGT---------------------------TT--------TT-TTTTT-TTTT-TTTTCA--------TACTTTT---AT-----CTTTTATTTTTTGGATCTTCTCTTAT--------T---TAGAGACT-AGCAACAATTTT-AAAAATCTTAATC-TAA----------------------TA-CA--TAATTA--G--TT-------------T----ATCTT-----------------TGTAAA-----CA----TC-T-------------------ATACTATG------GGGCCTCCGAT-------TTCATCGG--GC-TGGAA--GGTCATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTATG------GGGCCTCCGAT-------TTCATCGG--.................2611.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------ATACTATG------GGGCCTCCGAT-------TTCATCG....................2711.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTATG------GGGCCTCCGAT-------TTCATCGG--GC-..............2811.001100000
.................................................................................................................................................................................................................................................................T---AT-----CTTTTATTTTTTGGATCTTCTCT...........................................................................................................................................................................................................................................2620.501010000
....................................................................................................................................................................................TTAAGT---------------------------TT--------TT-TTTTT-TTTT-TTTT.............................................................................................................................................................................................................................................................................................2350.201010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----TC-T-------------------ATACTATG------GGGCCTCCGAT-------T..........................2560.171100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................C-T-------------------ATACTATG------GGGCCTCCGAT-------T..........................2260.171100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----CA----TC-T-------------------ATACTATG------GGGCCTCCGA...................................25200.153120000
.........................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------TGTAAA-----CA----TC-T-------------------ATACTATG------GGGCC........................................25200.102020000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-T-------------------ATACTATG------GGGCCTCCGA...................................21200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA-----CA----TC-T-------------------ATACTATG------GGGCCTCC.....................................25200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA-----CA----TC-T-------------------ATACTATG------GGGCCTCCGAT-------...........................28200.051100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------TGTAAA-----CA----TC-T-------------------ATACTATG------GGGCCTC......................................27200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----CA----TC-T-------------------ATACTATG------GGGCCTCCGAT-------...........................25200.051010000
droBip1
AAAA--AATTTAAAT----------A----------AA------ATA---A-AAAAA--A-------------------TT-------------AAAT----------------------------------------------------TAAAAAAA----AACG------------ACCCAAGTCTTCT----------------TTGT---T--------TT-TTTTT-TTTT-TTATTT---------GAACGT---TG-----CTTTTATTTCTTGAATCTTCTCTTT-------------GCGAGACT-AACAAGAGGTGTATCAAATCTTATAT-TCT----------------------TAACT--T------------------ATTTAACAGT--CATAT-----------------TGACTG-----AT----AC-A-------------------GAGTTAGA------CGGCCCT-AAA-AA-TCTATTGCTGG--GT-TGAGA--GGTCGTTSizeHit CountTotal NormTotal
No Reads
droKik1
CTAGTGAGTTAAAAAAAA---------------------------TA---A-A--TAAATTAACAGTGGCGCCAAA--TTTGTAT-----------------------------TTTTCAATATTTTCAAAATTTTATAGTCTATTCCG-TTTC-----------------GCATT-CATCCAAATCATAT----------------A---------------TA-TATTT-TTTT-TTT-TT--------TAGGTTT---TG-----CTTTTATTTATTGAATTTTCTCATTT------------ATGAGACT-AACAATAAGTGTAACAAATCTTACAA-TAC----------------------TA-CC--T------------------GACTAGCAGT--CATGT-----------------AGACTG-----GT----AC-A-------------------GAGT-AAA------TGGCCCT-GACTCA--TTATGGCTAG--GT-TGGAA--GGTCGTTSizeHit CountTotal NormTotal
No Reads
droFic1
CTGG--ACTTAAAGAAAAGGGATTT-AATGT----CAAACA-----G----GCT--------------------------------------------------ATGAACATGTTCAAGG---------------------------TAGAGTTGG-----------AG--------------------------------------CCGTAAAA--------CC-TTTTT-TTTT-TTTTTT---------GAGCTT---TA-----TCTTTATTTATTGAATCTTCTCTTG-------------AAGAGACT-TACAATAAGAAT-TCAGATCTTAACC-TATACTG----------TATATTA-----------TTA--A--TTTATATTATTTATTTGT--TATAT-----------------TA--------------------------------------------------------------T-G--TTTATTAATTG--GT-CGATAGCCCTCAATSizeHit CountTotal NormTotal
No Reads
droEle1
GACA--ATACAAAAC----------A----------AAAAA-------------------------CGGCAACAAA---CT-------------ACAA----------------------------------------------------CACACAGC----AGAA------------GCACATGTT---TTTT-------------T--TAA----------TT--T-TTTT-TT-TTTTTT-T------T--ACTT---TATTGTCATTTTATTTATTGAATCTTCTCTGAA------------TTGAGACT-AACAATAAGTATATAAAATCTTAAAT-TAA----------------------AAAGCTAT------------------ATCTGACAGT--CAAGT-----------------TGACTG-----AC----GC-G-------------------GGATGTAA------GGGCTCT-AAT-AA--CTATTGCTGA--GC-TGGAA--GGTCATTSizeHit CountTotal NormTotal
No Reads
droRho1
CGATT----CAAAAC--------------------CGAAGA-----GGTAAAAGAGA-------------------ATGCTTGAG-----------------------------TCACTG---------------------------TCAGGACCAGATCAG-------------------CAAGGCTTAT----------------TTATAAAT--------CT-TTTTT-TTTG-TTACTA---------AAGCTT---GG-----TTTTTATTTATTGGATCTTCTCTTT-------------ATGAGTCT-AACAATAAAGTT-GCAAATCTTAAAA-TAA----------------------TACAT--T------------------ATCTAACAGTTTAATTT-----------------TAACTG-----AA----TA-G-------------------AGACTACA------TGGTCCT-AAT-AA--TTAGCGCTGG--AT-TGGAA--GGTCGTTSizeHit CountTotal NormTotal
No Reads
droBia1
TCGA--AATAA-GAGAC--------AGT--AAGG--AC---A------CAAAAAGCA-------------------AAACAACAGTAAAGTG-------------------------------------------------------------CCTT---------AAATGTG-GCTAACGC-----------GGCCACAGAGTTAATTACAATT--------AA-TTTCT-TTTTTTGTGAT--------T--ATAT---AT-----GCATTATTTATTGAATATTCTCTTGT------------ATGAGACT-AACAATAAGTATATGAAATCTTAAGAATAT-----------AAATTTATTATTA-------------A--TTTA--TTAATTATTTAT--TATAT-----------------AGACTG-----AA----TT-T-------------------AGCT---A------GGGCCTT-AAT-AA--TTATTGCTGG--GC-TGGCA--GATCGTTSizeHit CountTotal NormTotal
No Reads
droTak1
TTCT--AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTGGCACCTTTT-------------T--TAAT-------AACT--T-TTTT-TTTTTTGTA--------TACGTTT---GC-----ATTTTATTTATTGGATCTTCTCTGAA------------TTGAGACT-AACAATAAGTATATAAAATCATAAAT-TAA----------------------AAAAC--T------------------ATCTAACAGT--CATGA-----------------TGACTG-----AC----GC-G-------------------AGATAAAA------GGGCTCT-AAT-AA--CTATTGCTGA--GC-TGGAA--GGTCATTSizeHit CountTotal NormTotal
No Reads
droEug1
AAAA--GCTTAAAAT----------AAT-------C--AAA---CTG--AAAAAATA-------------------ATGTAA--------------------------------------------------------------------TAATAA------------------------------------------------TAATAATAATA--------AA-TTTTT-TTCT-TTTATA---------TAGCTT---TG-----CTTTTATTTATTGAATATACTCTTAA---T----T---TTGAGACT-AACAGTAAGTTG-ACGAATCTTAACA-TTA----------------------AAATT--T------------------AACTAACAGT--ATACT----------------AAGACTG-----CA----TT-C------------------TGGGTG-AG------CCTCCCT-CAG-G--TCGGTCGCTGG--GT-GGGTA--AGTCATTSizeHit CountTotal NormTotal
No Reads
dm3
CAACTCAAT---------------------TAAGCC-----AAACTG---A-ACAAA--A-------------------TGATTTTGACGAACTTAAACAAATGA--------------------------------------------TGAAACAA-----------TT--------------------------AATAGCCCAAATGACAAAT--------AT-TTTTT-TTTT-TTTTTT-T------T--ACTT---TG-----CTTTTATTTATTGAATCTTCTTGTA-------------TAAGAACT-AACAATAAGTTT-GAAAATCTTAACT--ATAA---------CAA-GT-------ATT--T--TTTGAACAGTTG----TATTAT------TTTTC-----------------CAACTG-----TT----CT-A-------------------TGATTAAA------CGGCCCT-AAT-AATTTATTCGCTGG--GT-TGGTA--GGTCCTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
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droSim2
TTTT--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--ATA--------ATTGTATTT-T-TA-TTTTTT-T------T--TCCATGTTT-----TGCTTATTTATTGAATCTGCCCTTTTAC-T----T---AAGAGACT-AACAATAAGTTT-TCAAATCTTATTC-TGAAC--------------------TA-TC--T------------------AAATATCAT---TTTAT-----------------GGAATG-----AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAACGCTGG--GC-TGGTT--GGTCGTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCTGG--GC-TGGTT--GGTCGTT23161.7528000000000000271000
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-A................................21180.8916000000100600000000
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.................................................................................................................................................................................................................................................TT-T------T--TCCATGTTT-----TGCTTATTTATTGAA...................................................................................................................................................................................................................................................2850.60300000002010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCTGG--GC-TGGTT--GGTCGT.22160.56900100000101060000
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AAC-AAATTTAACGCTGG--GC-TGG...........23180.33600000002100030000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AA...............................25140.29400000000121000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AAC-AAATTTAACGCTGG--GC-TGGTT--G......26180.28500000010210010000
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AAC-AAATTTAACGCTGG--GC-TGGT..........24180.22400000021000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCTGG--GC-TGGTT--GGTC...20180.22400000020101000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGCTGG--GC-TGGTT--GGTC...21180.22400000010200010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAACG.......................27190.21400000002110000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAA.........................25190.21400000000004000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCT-GTG------TGGCCT--AAC-AAATTTAACGCC.....................28190.21400400000000000000
....................................................................................................................................................................................................................................................................................................................GAGACT-AACAATAAGTT........................................................................................................................................................................................................17200.20400000000004000000
..................................................................................................................................................................................................................................................T-T------T--TCCATGTTT-----TGCTTATTTATTGA....................................................................................................................................................................................................................................................2650.20100000001000000000
..............................................................................................................................................................................................................................................TTTTT-T------T--TCCATGTTT-----TGCTTATTTATT......................................................................................................................................................................................................................................................2850.20100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AAC-AAATTTAACGCTGG--GC-TG............22200.20400000000010030000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAAT.............................25160.19300000000300000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATT............................26160.19300000000200010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCTGG--GC-TGGTT--GGTCGTA23160.19300000000000030000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGCTGG--GC-TGGTT--GGTCGTT24160.19300000000000030000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCTGG--GC-TGGTT--GGTCG..21170.18300000000001020000
..............................................................................................................................................................................................................................................................TCCATGTTT-----TGCTTATTTATTGAATC.................................................................................................................................................................................................................................................2660.17100000001000000000
................................................................................................................................................................................................................................................TTT-T------T--TCCATGTTT-----TGCTT.............................................................................................................................................................................................................................................................1960.17100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AAATTTAACGCTGG--GC-TGGTT--GGT....26180.17300000010000020000
...........................................................................................................................................................................................................................................................T--TCCATGTTT-----TGCTTATTTATTGAA...................................................................................................................................................................................................................................................2560.17100000000100000000
....................................................................................................................................................................................................................................................T------T--TCCATGTTT-----TGCTTATTTATTGAA...................................................................................................................................................................................................................................................2660.17100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCTGG--GC-TGGTT--GGTA...20180.17300000000000030000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAACGCT.....................32180.17300000030000000000
................................................................................................................................................................................................................................................TTT-T------T--TCCATGTTT-----TGCTTA............................................................................................................................................................................................................................................................2060.17100000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-.................................20190.16300000020010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-GTG------TGGCCT--AAC-AAATTTAACGCTGG--G................28200.15300000002100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATT............................28140.14200000000101000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAA..............................24160.13200000010010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGCTGG--GC-TGGTT--GGTCGT.24160.13200100000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGCTGG--GC-TGGTT--GGTCGTT25160.13200000000000020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGCTGG--GC-TGGTT--GGTCGG.24170.12200200000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAAC........................28180.11200000000200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGCTGG--GC-TGGTT--GGT....20180.11200000001001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCTGG--GC-TGGTT--GGT....19180.11200000000000020000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAACG.......................30180.11200000020000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AAATTTAACGCTGG--GC-TGGTT--GGTC...27180.11200000020000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AAC-AAATTTAACGCTGG--GC-TGGTT--GGTC...29180.11200000011000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AAC-AAATTTAACGCTGG--GC-TGGTT--GGT....28180.11200000010000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................C-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAACGCT.....................30190.11200000020000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--A....................................18190.11200000000002000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-G-------------------TGCT-GTG------TGGCCT--.....................................16190.11200000000002000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AA...................................19190.11200000010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AAC-AAATTTAACGCT.....................16200.10200000001010000000
.........................................................................................................................................................................................................................................................................................................T----T---AAGAGACT-AACAATAAGT.........................................................................................................................................................................................................20200.10200000000002000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-GTG------TGGCCT--AAC-AAATTTAACGC......................26200.10200020000000000000
...................................................................................................................................................................................................................................................................................................................AGAGACT-AACAATAAGT.........................................................................................................................................................................................................17200.10200000000002000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCT-GTG------TGGCCT--AAC-AAATTTAACGT......................27200.10200000000002000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-GTG------TGGCCT--AAC-AAATTTAACGC......................24200.10200000000200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AATG-----AT----TC-G-------------------TGCT-GTG------TGGCCT--.....................................22140.07100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AATG-----AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-.................................25140.07100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATG-----AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAA..............................27140.07100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-A................................24140.07100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----AT----TC-G-------------------TGCT-GTG------TGGCC........................................18150.07100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----AT----TC-G-------------------TGCT-GTG------TGGCCT--AAC-.................................23150.07100000010000000000
....................................................................................................................................................................................................................................................................................................TTAC-T----T---AAGAGACT-AACAATAAGTT........................................................................................................................................................................................................25150.07100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATG-----AT----TC-G-------------------TGCT-GTG------TGGCCT--A....................................22150.07100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----AT----TC-G-------------------TGCT-GTG------TGGC.........................................18150.07100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----AT----TC-G-------------------TGCT-GTG------TGGCC........................................19150.07100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTAACGCTGG--GC-TGGTT--GGTCGT.27160.06100000000000010000
.........................................................................................................................................................................................................................................................................................................................T-AACAATAAGTTT-TCAAATCTTA............................................................................................................................................................................................23160.06100000000100000000
...................................................................................................................................................................................................................................................................................................................AGAGACT-AACAATAAGTTT-TCAAATCT..............................................................................................................................................................................................27160.06100000000010000000
.....................................................................................................................................................................................................................................................................................................TAC-T----T---AAGAGACT-AACAATAAGTTT-T.....................................................................................................................................................................................................26160.06100000000001000000
.....................................................................................................................................................................................................................................................................................................TAC-T----T---AAGAGACT-AACAAT.............................................................................................................................................................................................................19160.06100000000001000000
..............................................................................................................................................................................................................................................................................................................T---AAGAGACT-AACAATAAGTTT-TCAAA.................................................................................................................................................................................................26160.06100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGCTGG--GC-TGGTT--GGTCG..23170.06100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGG--GC-TGGTT--GGTCGTT20170.06100000000001000000
.........................................................................................................................................................................................................................................................................................................................T-AACAATAAGTTT-TCAAATCTT.............................................................................................................................................................................................22170.06100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCT-GTG------TGGCCT--AAC-AAATTTAACGCTGG--G................31180.06100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTCT..........................27180.06100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AAATTTAACGCTGG--GC-TGGTT--.......23180.06100000000010000000
......................................................................................................................................................................................................................................................................................................................GACT-AACAATAAGTTT-T.....................................................................................................................................................................................................17180.06100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCTGG--GC-TGGTT--GGTCG..20180.06100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAACGCTT....................33180.06100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAAAAA...........................26180.06100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTATA........................29180.06100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAAC.............................24180.06100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAACGCTGG--GC-TGGTT--GGT....23180.06100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-AAATTTAACGCTGG--GC-TGGTT--.......24180.06100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AAATTTAACGCTGG--GC-TGGTT--G......24180.06100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAT.........................28180.06100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT--AAC-AAATTTAACGCTGG--GC-TGGTT--GGTC...30180.06100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGCTGG--GC-TGGTT--GAA....21180.06100000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATT............................24180.06100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAACGCTGG--GC-TGGTT--GGTC...23180.06100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAACGC......................30180.06100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTTG.........................28180.06100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAACGCTGG--GC-TGGTT--G......21180.06100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTC...........................26180.06100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TC-G-------------------TGCT-GTG------TGGCCT--AAC-AAT..............................23180.06100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AAC-AAATTTAACGCTGG--GC-TGGTT--GC.....27180.06100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-G-------------------TGCT-GTG------TGGCCT--A....................................17190.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAACGC......................28190.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAACGCT.....................29190.05100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................C-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTT...........................24190.05100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------TGCT-GTG------TGGCCT--AAC-AAAT.............................21190.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------TGCT-GTG------TGGCCT--AAC-AAATTT...........................23190.05100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAAA........................26190.05100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................C-G-------------------TGCT-GTG------TGGCCT--AAC-AAATTTAA.........................26190.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-G-------------------TGCT-GTG------TGGCC........................................15190.05100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-GTG------TGGCCT--AAC-AAATTTAACGCTG....................28200.05100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AAATTTAACGCTGG--GC-TG............20200.05100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCT-GTG------TGGCCT--AAC-AAATTTAAA........................25200.05100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCT-GTG------TGGCCT--AAC-AAATTTAT.........................24200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-GTG------TGGCCT--AAC-AAATTTAACGCTGG--GC-..............29200.05100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCT-GTG------TGGCCT--AAC-AAAT.............................20200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-AAATTTAACGCTGG--GC-TG............21200.05100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCT--AAC-AAATTTAACGCTGG--GC-..............25200.05100000000000010000
..................................................................................................................................................................................................................................................................................................................AAGAGACT-AACAATAAGT.........................................................................................................................................................................................................18200.05100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCT-GTG------TGGCCT--AAC-AAATTTAACCT......................27200.05100100000000000000
...................................................................................................................................................................................................................................................................................................................AGAGACT-AACAATAA...........................................................................................................................................................................................................15200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................GACT-AACAATAAGTTT-......................................................................................................................................................................................................16200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-GTG------TGGCCT--AAC-AAATTTAACGCTG....................26200.05100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-GTG------TGGCCT--AAC-AAATTTAACGCT.....................25200.05100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT--AAC-AAATTTAACGCTGG--GC-TG............23200.05100000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG------TGGCCT--AAC-AAATTTAACGCTGG--G................26200.05100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-GTG------TGGCCT--AAC-AAATTTAACGCT.....................27200.05100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCT--AAC-AAATTTAACGCT.....................18200.05100000000001000000
droSec2
ATTA--AACT----------------------------------------TA-----------------------------------------------------------------TTG---------------------------CAAGTTCTTATTCAATAAG------------AT---------------------------TCAAAAAA--------TA-TATTT-TTTT-TTTTCT--------TA-ACTT-A-TT-----GGGTTATTTATTGGATCTTCTCTTTT--------T---GTGAGACT-AACAATAATTAT-TCAAATCTTATTA-TTT----------------------AA-CT--T-------------A----TATTAATTAC--AATGT--------GAA-----GTAATTG-----TA----TTAG-------------------TTAG-AGA------CGGCCCT-AGG-AT-TTCTTTGCTGG--GC-TGGAG--AATCTTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................TTATTGGATCTTCTCTTTT--------T---GTGAGAC.....................................................................................................................................................................................................................27201.6032140180
...................................................................................................................................................................................................................................................................................TTATTGGATCTTCTCTTTT--------T---GTGA........................................................................................................................................................................................................................24200.951911080
..................................................................................................................................................................................................................................................................................................................................................................................................................C--AATGT--------GAA-----GTAATTG-----TA----TTAG-------------------TT.........................................................24170.881511040
...................................................................................................................................................................................................................................................................................TTATTGGATCTTCTCTTTT--------T---GTGAG.......................................................................................................................................................................................................................25200.80169250
...................................................................................................................................................................................................................................................................................TTATTGGATCTTCTCTTTT--------T---GTGAGA......................................................................................................................................................................................................................26200.501010000
..................................................................................................................................................................................................................................................................................................................................................................................................................C--AATGT--------GAA-----GTAATTG-----TA----TTAG-------------------TTAG-A.....................................................27170.4175110
..................................................................................................................................................................................................................................................................................................................................................................................................................C--AATGT--------GAA-----GTAATTG-----TA----TTAG-------------------T..........................................................23170.3563030
...................................................................................................................................................................................................................................................................................TTATTGGATCTTCTCTTTT--------T---GTGAGACT-...................................................................................................................................................................................................................28200.3065010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AGG-AT-TTCTTTGCTGG--GC-TG............21200.2042020
....................................................................................................................................................................................................................................................................................TATTGGATCTTCTCTTTT--------T---GTGAGAC.....................................................................................................................................................................................................................26200.1533000
...................................................................................................................................................................................................................................................................................TTATTGGATCTTCTCTTTT--------T---GTG.........................................................................................................................................................................................................................23200.1532010
..................................................................................................................................................................................................................................................................................................................................................................................................................C--AATGT--------GAA-----GTAATTG-----TA----TTAG-------------------TTAG-......................................................26170.1221010
...................................................................................................................................................................................................................................................................................TTATTGGATCTTCTCTTTT--------T---GT..........................................................................................................................................................................................................................22200.1022000
....................................................................................................................................................................................................................................................................................TATTGGATCTTCTCTTTT--------T---GTGAGA......................................................................................................................................................................................................................25200.1022000
..................................................................................................................................................................................................................................................................................................................................................................................................................C--AATGT--------GAA-----GTAATTG-----TA----TTAG-------------------TTA........................................................25170.0610010
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGT--------GAA-----GTAATTG-----TA----TTAG-------------------TTAG-AGA------.............................................26170.0610010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG-AGA------CGGCCCT-AGG-AT-TTCTTTGC......................26170.0611000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AGG-AT-TTCTTTGCTGG--GC-TGGAG--AATC...28180.0610010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------TTAG-AGA------CGGCCCT-AGG-.................................18200.0511000
...................................................................................................................................................................................................................................................................................TTATTGGATCTTCTCTTTT--------T---GTGAGACA-...................................................................................................................................................................................................................28200.0511000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTGCTGG--GC-TGGAG--AATCTT.24200.0511000
....................................................................................................................................................................................................................................................................................TATTGGATCTTCTCTTTT--------T---GTGAGACT-...................................................................................................................................................................................................................27200.0511000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AGG-AT-TTCTTTGCTGG--GC-TGGAG--AA.....26200.0511000
droYak3
AACG--CTGT--------------------TG----GA---A------AATAACGCT-------------------AAACCGTGG-----------------------------CATTTG---------------------------TCAGCTCCTG----------AATGGCAGC-AACCCTA------T-TTGCCACAA------A---TAT-GTTTTTTTTTTTTTTT-T-TT-TTTTTT-T------T--GCTTTTTTT-----TTATTATTTATTGAATCTTCCCTTTGTG-T----T---AAGAGACT-AACAATAAGTGT-TCAAATCTTAATC-TA------------------------A-CT--T------------------AATTAACTTT--CACTT-----------------AG---------------------------TGATAGTTTTTTCATT--A------ATGCCCT-AAT-AAGTTTATTGCTGG--GC-TGGGA--GGTCGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................TTTTTTTTTTTT-T-TT-TTTTTT-..........................................................................................................................................................................................................................................................................................21201.7034003400000000
......................................................................................................................................................................................................................................................................................TTGAATCTTCCCTTTGTG-T----T---AAGAGAC.....................................................................................................................................................................................................................27200.6012012000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--A------ATGCCCT-AAT-AAGTTTATTGC......................24200.40808000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--A------ATGCCCT-AAT-AAGTTTATTGCTGG--G................27200.35700000000007
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAT-AAGTTTATTGCTGG--GC-TGGG..........24200.30606000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--A------ATGCCCT-AAT-AAGTTTATTGCT.....................25200.30605100000000
.....................................................................................................................................................................................................................T-GTTTTTTTTTTTTTTT-T-T...................................................................................................................................................................................................................................................................................................19200.25500500000000
......................................................................................................................................................................................................................................................................................................................................................TA------------------------A-CT--T------------------AATTAACTTT--CACTT-----------------AG---------------------------TGA...................................................................26200.25505000000000
.......TGT--------------------TG----GA---A------AATAACGCT-------------------AAACCGTGG-----------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000000000
........GT--------------------TG----GA---A------AATAACGCT-------------------AAACCGTGG-----------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................2540.25101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATT--A------ATGCCCT-AAT-AAGTTTAT.........................25200.20404000000000
.....................................................................................................................................................................................................................T-GTTTTTTTTTTTTTTT-T-TT-T................................................................................................................................................................................................................................................................................................21200.20400400000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAT-AAGTTTATTGCTGG--GC-TGG...........23200.20403100000000
......................................................................................................................................................................................................................................................................................TTGAATCTTCCCTTTGTG-T----T---AAGAGA......................................................................................................................................................................................................................26200.15303000000000
................................................................................................................................................................................................................................................................................................................................TAAGTGT-TCAAATCTTAATC-TA------------------------A-CT--........................................................................................................................................................25200.15303000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAGTTTATTGCTGG--GC-TGG...........20200.10201000010000
................................................................................................................................................................................................................................................................................................................................TAAGTGT-TCAAATCTTAATC-TA------------------------A-CT--T------------------AA...................................................................................................................................28200.10202000000000
......................................................................................................................................................................................................................................................................................TTGAATCTTCCCTTTGTG-T----T---AAGAG.......................................................................................................................................................................................................................25200.10201000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--A------ATGCCCT-AAT-AAGTTTATTGCTGG--G................28200.10202000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-AAGTTTATTGCTGG--GC-TGGGA--G......25200.10202000000000
......................................................................................................................................................................................................................................................................................................................................................................................T------------------AATTAACTTT--CACTT-----------------AG---------------------------TGATAGT...............................................................25200.10201100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAGTTTATTGCTGG--GC-TGGGA--G......23200.10202000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAGTTTATTGCTGG--GC-TGGGA--.......22200.10202000000000
...................................................................................................................................................................................................................................................................................................................................................TC-TA------------------------A-CT--T------------------AATTAACTTT--CACTT-----------------AG---------------------------T.....................................................................26200.10220000000000
....................................................................................................................................................................................................................................................................................................TGTG-T----T---AAGAGACT-AACAATAAGTG........................................................................................................................................................................................................25200.10201000010000
......................................................................................................................TG---------------------------TCAGCTCCTG----------AATGGCAGC-AACCC........................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................TA------------------------A-CT--T------------------AATTAACTTT--CACTT-----------------AG---------------------------TG....................................................................25200.05100100000000
...................................................................................................................................................................................................................................................................................................................AGAGACT-AACAATAAGTGT-TCAAATCTT.............................................................................................................................................................................................28200.05101000000000
......................................................................................................................................................................................................................................................................................................................................T-TCAAATCTTAATC-TA------------------------A-CT--T------------------AATTAAA..............................................................................................................................27200.05101000000000
.....................................................................................................................................................AGCTCCTG----------AATGGCAGC-AACCC........................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
...................................................................................................................................................TCAGCTCCTG----------AATGGCAGC-AACCCTA------T-T.............................................................................................................................................................................................................................................................................................................................................28200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAT-AAGTTTATTGCTGG--GC-C.............21200.05100100000000
......................................................................................................................................................................................................................................................................................TTGAATCTTCCCTTTGTG-T----T---AAGA........................................................................................................................................................................................................................24200.05101000000000
...................................................................................................................................................................................................................................................................................TTATTGAATCTTCCCTTTGTG-T----T---AAGA........................................................................................................................................................................................................................27200.05101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTGCTGG--GC-TGGGA--GGTCGTT25200.05101000000000
....................................................................................................................................................................................................................................................................................TATTGAATCTTCCCTTTGTG-T----T---AAGAGA......................................................................................................................................................................................................................28200.05101000000000
...........................................................................................................................................................................................................................................................................................TCTTCCCTTTGTG-T----T---AAGAGAC.....................................................................................................................................................................................................................22200.05101000000000
................................................................................................................................................................................................................................................................................................................................................TAATC-TA------------------------A-CT--T------------------AATTAACTTT--CACTT-----------------AG---------------------------T.....................................................................29200.05100100000000
.....................................................................................................................................................AGCTCCTG----------AATGGCAGC-AACCCTA------T-..............................................................................................................................................................................................................................................................................................................................................25200.05101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTT--CACTT-----------------AG---------------------------TGATAGTTTTTTCATT--A------A............................................28200.05101000000000
...................................................................................................................................................................................................................................................................................................TTGTG-T----T---AAGAGACT-AACAATAAGTGT-......................................................................................................................................................................................................27200.05100100000000
........................................................................................................................................................................................................................TTTTTTTTTTTTTTT-T-TT-TTTTT............................................................................................................................................................................................................................................................................................23200.05101000000000
.....................................................................................................................................................................................................................T-GTTTTTTTTTTTTTTT-T-TT-TTT..............................................................................................................................................................................................................................................................................................23200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-AAGTTTATTGCTGG--GC-TGG...........22200.05101000000000
......................................................................................................................................................................................................................................................................................TTGAATCTTCCCTTTGTG-T----T---AAGAGACT-...................................................................................................................................................................................................................28200.05100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTGCTGG--GC-TGGGA--GGTCGT.24200.05101000000000
......................................................................................................................................................................................................................................................................................TTGAATCTTCCCTTTGTG-T----T---AAGAGACC-...................................................................................................................................................................................................................28200.05100100000000
.......................................................................................................................................................................................................................................................................................TGAATCTTCCCTTTGTG-T----T---AAGAGACT-...................................................................................................................................................................................................................27200.05101000000000
.................................................................................................................................................................................................................................................................................................................................AAGTGT-TCAAATCTTAATC-TA------------------------A-CT--........................................................................................................................................................24200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTATTGCTGG--GC-TGGGA--GG.....22200.05101000000000
..............................................................................................................................................................................................................................................................................................TCCCTTTGTG-T----T---AAGAGACT-...................................................................................................................................................................................................................20200.05100100000000
......................................................................................................................................................................................................................................................................................................TG-T----T---AAGAGACT-AACAATAAGTGT-TCA...................................................................................................................................................................................................27200.05101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------AG---------------------------TGATAGTTTTTTCATT--A------ATGCCC.......................................26200.05101000000000
................................................................................................................................................................................................................................................................................................................................TAAGTGT-TCAAATCTTAATC-TA------------------------A-CC--........................................................................................................................................................25200.05100100000000
...................................................................................................................................................TCAGCTCCTG----------AATGGCAGC-AACCCTA------T-..............................................................................................................................................................................................................................................................................................................................................27200.05101000000000
......................................................................................................................................................GCTCCTG----------AATGGCAGC-AACCCTA------T-TTGC..........................................................................................................................................................................................................................................................................................................................................28200.05100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-AAGTTTATTGCTGG--GC-TGGG..........22200.05100000010000
..................................................................................................................................................................................................................................................................................TTTATTGAATCTTCCCTTTGTG-T----T---............................................................................................................................................................................................................................24200.05101000000000
..............................................................................................................................................................................................................................................................................................................T---AAGAGACT-AACAATAAGTGT-TCAAATCT..............................................................................................................................................................................................29200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-AAGTTTATTGCTGG--GC-TG............21200.05100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAT-AAGTTTATTGCTGG--GC-TGGGA--G......26200.05101000000000
..................................................................................................................................................................................................................................................................................TTTATTGAATCTTCCCTTTGTG-T----T---AAG.........................................................................................................................................................................................................................27200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTTATTGCTGG--GC-TGGGA--GG.....23200.05101000000000
....................................................................................................................................................CAGCTCCTG----------AATGGCAGC-AACCC........................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAT-AAGTTTATTGCTGG--GC-..............20200.05100100000000
......................................................................................................................................................................................................................................................................................................................................................................................T------------------AATTAACTTT--CACTT-----------------AG---------------------------TGATAG................................................................24200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTAACTTT--CACTT-----------------AG---------------------------TGA...................................................................19200.05101000000000
....................................................................................................................................................................................................................................................................................TATTGAATCTTCCCTTTGTG-T----T---AAGA........................................................................................................................................................................................................................26200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAGTTTATTGCTGG--GC-TGGG..........21200.05101000000000
......................................................................................................................................................................................................................................................................................................................................T-TCAAATCTTAATC-TA------------------------A-CT--T------------------AATTAACT.............................................................................................................................28200.05101000000000
......................................................................................................................TG---------------------------TCAGCTCCTG----------AATGGCAGC-.............................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
droEre2
ATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TTATTTTTTTT--------T--ACCC---TT-----CTTTTAATTATTGAATCTTCTCAATT------------TCGAGACT-AACAATAAGTGTATCAAATCTTATAC-TAT----------------------AA-CC--T------------------AATTAGCAGT--CATGT-----------------AGGCTG-----GA----TC-T-------------------GTAAAAAT------GGCCCCT-GAA-AA--TTATGGCTTATGACAAAGTC--GGTGTGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 09:38 AM