ID:

dwi_4068

 Coordinate:

scf2_1100000004967:2891985-2892075 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.8

Flybase annnotation

exon [dwil_GLEANR_19171:2]; exon [dwil_GLEANR_19171:1]; CDS [Dwil\GK18611-cds]; CDS [Dwil\GK18611-cds]; intron [Dwil\GK18611-in]

Repeatable elements

NameClassFamilyStrand
BEL-1_DWil-I-intLTRPao+
mature
  1. scf2_1100000002908:4627-4652 +
  2. scf2_1100000004648:23298-23323 +
  3. scf2_1100000004694:12952-12977 +
  4. scf2_1100000004947:407257-407282 +
  5. scf2_1100000004947:444708-444733 +
  6. scf2_1100000004919:44067-44092 +
  7. scf2_1100000004935:32377-32402 +
  8. scf2_1100000004936:1068678-1068703 +
  9. scf2_1100000004954:302549-302574 +
  10. scf2_1100000004961:5066150-5066175 +
  11. scf2_1100000004961:5188117-5188142 +
  12. scf2_1100000004965:433753-433778 +
  13. scf2_1100000004967:1251580-1251605 +
  14. scf2_1100000004967:2775043-2775068 +
  15. dwi_4068  scf2_1100000004967:2892012-2892037 +
  16. scf2_1100000004967:3218297-3218322 +
  17. scf2_1100000004967:3367768-3367793 +
  18. scf2_1100000010261:1158-1183 +
  19. scf2_1100000000546:2179-2204 +
  20. scf2_1100000000594:941-966 +
star
  1. scf2_1100000007871:999-1023 +
  2. scf2_1100000002892:1277-1301 +
  3. scf2_1100000003122:2893-2917 +
  4. scf2_1100000001882:6659-6683 +
  5. scf2_1100000012064:280-304 +
  6. scf2_1100000004648:23328-23352 +
  7. scf2_1100000004694:12982-13006 +
  8. scf2_1100000004943:61222-61246 +
  9. scf2_1100000004947:407287-407311 +
  10. scf2_1100000004947:444738-444762 +
  11. scf2_1100000004935:32407-32431 +
  12. scf2_1100000004936:1308132-1308156 +
  13. scf2_1100000004936:1308232-1308256 +
  14. scf2_1100000004954:302579-302603 +
  15. scf2_1100000004965:433783-433807 +
  16. scf2_1100000004967:2775073-2775097 +
  17. dwi_4068  scf2_1100000004967:2892042-2892066 +
  18. scf2_1100000004968:3011236-3011260 +
  19. scf2_1100000000546:2209-2233 +
  20. scf2_1100000000594:971-995 +

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------##################################################
AGGCCACAGATGTCCTTCAACCAAGCTCTAGCGGTCAGACCTTTCCATCCGTAAGCCGAAAACCTACGGCACCTCAGTGCAAGAGAGCTCAGCACCTGATGCTTGTATAATTTCGAATCCTGCGTCCTCCGATTCTTCCAGCAGCCCTCATGTAAACGTGGGAAGTTACTTCGCCTCCACTCGCAACACTG
*****************************************************************************.(((.((((((((((...)))).)))).............)).))).........*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
....................CCAAGCTCTAGCGGTCAGACCTT.................................................................................................................................................... 23 0 20 0.45 9 9 0 0
.........ATGTCCTTCAACCAAGCTCTAGCGGTCA.......................................................................................................................................................... 28 0 20 0.25 5 5 0 0
.............................................................................TGCAAGAGAGCTCAGCACCTGATGCT........................................................................................ 26 0 20 0.15 3 0 3 0
....................................................................................................GCTTGTATAATTTCGAATCCTGCGTCC................................................................ 27 0 20 0.15 3 3 0 0
.........ATGTCCTTCAACCAAGCTCTAG................................................................................................................................................................ 22 0 20 0.15 3 3 0 0
..........................TCTAGCGGTCAGACCTTTCCATCCG............................................................................................................................................ 25 0 20 0.15 3 1 2 0
.........ATGTCCTTCAACCAAGCTCTAGCGG............................................................................................................................................................. 25 0 20 0.15 3 3 0 0
....................CCAAGCTCTAGCGGTCAGACCTTTCCA................................................................................................................................................ 27 0 20 0.15 3 3 0 0
.........ATGTCCTTCAACCAAGCTCTAGC............................................................................................................................................................... 23 0 20 0.15 3 3 0 0
......CAGATGTCCTTCAACCAAGCTCTAGCGG............................................................................................................................................................. 28 0 20 0.10 2 2 0 0
..........TGTCCTTCAACCAAGCTCTAGCGGTCA.......................................................................................................................................................... 27 0 20 0.10 2 2 0 0
....................................................................................................................................TTCTTCCAGCAGCCCTCATGTAAACG................................. 26 0 20 0.10 2 1 1 0
..........TGTCCTTCAACCAAGCTCTAGCGGTC........................................................................................................................................................... 26 0 20 0.10 2 2 0 0
..........................TCTAGCGGTCAGACCTTTCCATCCGT........................................................................................................................................... 26 0 20 0.10 2 2 0 0
........................................................................................TCAGCACCTGATGCTTGTATAATTTCGAA.......................................................................... 29 0 20 0.05 1 1 0 0
.....................................GACCTTTCCATCCGTAAGCCGA.................................................................................................................................... 22 0 20 0.05 1 1 0 0
......................................ACCTTTCCATCCGTAAGCCGAA................................................................................................................................... 22 0 20 0.05 1 1 0 0
..............CTTCAACCAAGCTCTAGCGG............................................................................................................................................................. 20 0 20 0.05 1 1 0 0
....CACAGATGTCCTTCAACCAAGCTCT.................................................................................................................................................................. 25 0 20 0.05 1 1 0 0
.............CCTTCAACCAAGCTCTAGCCGTCA.......................................................................................................................................................... 24 1 20 0.05 1 1 0 0
...........................................TCCATCCGTAAGCCGAAAACCTAC............................................................................................................................ 24 0 20 0.05 1 1 0 0
............................................................................................CACCTGATGCTTGTATAATTTCG............................................................................ 23 0 20 0.05 1 1 0 0
.............CCTTCAACCAAGCTCTAGCCGTCAG......................................................................................................................................................... 25 1 20 0.05 1 1 0 0
...........................................................................................................TAATTTCGAATCCTGCGTCCTCCGA........................................................... 25 0 20 0.05 1 0 1 0
..................AACCAAGCTCTAGCGGTCA.......................................................................................................................................................... 19 0 20 0.05 1 1 0 0
............................................CCATACGTAAGCCGAAAACCTACGGCAC....................................................................................................................... 28 1 20 0.05 1 1 0 0
......................................ACCTTTCCATCCGTAAGCCGAAAACC............................................................................................................................... 26 0 20 0.05 1 1 0 0
.............................................................................TGCAAGAGAGCTCAGCACCTGATGCTTG...................................................................................... 28 0 20 0.05 1 0 1 0
....................................AGACCTTTCCATCCGTAAGCCGAAAACC............................................................................................................................... 28 0 20 0.05 1 1 0 0
....CACAGATGTCCTTCAACCAAGCTC................................................................................................................................................................... 24 0 20 0.05 1 0 1 0
....................................................................................................................ATCCTGCGTCCTCCGATTCTTCCAG.................................................. 25 0 20 0.05 1 1 0 0
...........................................................................AGTGCAAGAGAGCTCAGCACCTGA............................................................................................ 24 0 20 0.05 1 1 0 0
.....................................................................................................................................TCTTCCAGCAGCCCTCATGTAAACGT................................ 26 0 20 0.05 1 1 0 0
..................................................................................................................................................................AAGTTACTTCGCCTCCACTCGCA...... 23 0 20 0.05 1 1 0 0
........................................CTTTCCATCCGTAAGCCGAAAACCT.............................................................................................................................. 25 0 20 0.05 1 1 0 0
..............CTTCAACCAAGCTCTAGCGGTCA.......................................................................................................................................................... 23 0 20 0.05 1 1 0 0
..........TGTCCTTCAACCAAGCTCTAGCG.............................................................................................................................................................. 23 0 20 0.05 1 1 0 0
.......................................................................................................TGTATAATTTCGAATCCTGCGTCCTC.............................................................. 26 0 20 0.05 1 1 0 0
............................................................................................................................TCCTCCGATTCTTCCAGCAGCCCTCA......................................... 26 0 20 0.05 1 1 0 0
......CAGATGTCCTTCAACCAAGCTCTAG................................................................................................................................................................ 25 0 20 0.05 1 1 0 0
......................AAGCTCTAGCGGTCAGACCTTTCCA................................................................................................................................................ 25 0 20 0.05 1 0 1 0
....................CCAAGCTCTAGCGGTCAGACCTTT................................................................................................................................................... 24 0 20 0.05 1 1 0 0
.................................................................................................................................................CCTCATGTAAACGTGGGAAGTTAC...................... 24 0 20 0.05 1 1 0 0
............TCCTTCAACCAAGCTCTAGCGGTCAG......................................................................................................................................................... 26 0 20 0.05 1 1 0 0
.........ATGTCCTTCAACCAAGCTCTAGCGGT............................................................................................................................................................ 26 0 20 0.05 1 1 0 0
.......................................................................................................TGTATAATTTCGAATCCTGCGTCCT............................................................... 25 0 20 0.05 1 1 0 0
......................................................................................................................................................................TACTTCGCCTCCACTCGCAACAC.. 23 0 20 0.05 1 1 0 0
...........................................TCCATCCGTAAGCCGAAAACCTACGGCA........................................................................................................................ 28 0 20 0.05 1 1 0 0
.............CCTTCAACCAAGCTCTAGCGGTCA.......................................................................................................................................................... 24 0 20 0.05 1 1 0 0
....................CCAAGCTCTAGCGGTCAGACCTTTCC................................................................................................................................................. 26 0 20 0.05 1 1 0 0
................................................................................................................................................CCCTCATGTAAACGTGGGAAGTTACT..................... 26 0 20 0.05 1 1 0 0
......CAGATGTCCTTCAACCAAGCTCTAGC............................................................................................................................................................... 26 0 20 0.05 1 1 0 0
.....................CAAGCTCTAGCGGTCAGACCTT.................................................................................................................................................... 22 0 20 0.05 1 1 0 0
....................................................................................................GCTTGTATAATTTCGAATCCTG..................................................................... 22 0 20 0.05 1 1 0 0
................TCAACCAAGCTCTAGCGGTCAGACCTT.................................................................................................................................................... 27 0 20 0.05 1 1 0 0
.....................CAAGCTCTAGCGGTCAGACCTTTCCA................................................................................................................................................ 26 0 20 0.05 1 1 0 0
...........................CTAGCGGTCAGACCTTTCCATCCG............................................................................................................................................ 24 0 20 0.05 1 0 0 1
..........TGTCCTTCAACCAAGCTCTAGCGGT............................................................................................................................................................ 25 0 20 0.05 1 0 1 0
.................................................................................................GATGCTTGTATAATTTCGAATCCT...................................................................... 24 0 20 0.05 1 1 0 0
...................................................................................................TGCTTGTATAATTTCGAATCCTGCGTCC................................................................ 28 0 20 0.05 1 1 0 0
..............CTTCAACCAAGCTCTAGCGGTCAGACC...................................................................................................................................................... 27 0 20 0.05 1 1 0 0
.....................................................................................................................................................ATGTAAACGTGGGAAGTTACTTCGCCT............... 27 0 20 0.05 1 1 0 0
.............CCTTCAACCAAGCTCTAGCGGTC........................................................................................................................................................... 23 0 20 0.05 1 1 0 0
..........................................TTCCATACGTAAGCCGAAAACCTACGG.......................................................................................................................... 27 1 20 0.05 1 1 0 0
............................TAGCGGTCAGACCTTTCCATCCGT........................................................................................................................................... 24 0 20 0.05 1 0 1 0
........GATGTCCTTCAACCAAGCTCTAGCGG............................................................................................................................................................. 26 0 20 0.05 1 1 0 0
........GATTTCCTTCAACCAAGCTCTAGC............................................................................................................................................................... 24 1 20 0.05 1 1 0 0
......CACATGTCCTTCAACCAAGCTCTAG................................................................................................................................................................ 25 1 20 0.05 1 1 0 0
.....................CAAGCTCTAGCGGTCAGACCTTT................................................................................................................................................... 23 0 20 0.05 1 1 0 0

Anti-sense strand reads

TCCGGTGTCTACAGGAAGTTGGTTCGAGATCGCCAGTCTGGAAAGGTAGGCATTCGGCTTTTGGATGCCGTGGAGTCACGTTCTCTCGAGTCGTGGACTACGAACATATTAAAGCTTAGGACGCAGGAGGCTAAGAAGGTCGTCGGGAGTACATTTGCACCCTTCAATGAAGCGGAGGTGAGCGTTGTGAC
***********************************************************.(((.((((((((((...)))).)))).............)).))).........***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V119
head
 M020
head
 V117
male body
.........................................................................................................................................GGTCGTCGGGAGTACATTTGCACCCT............................ 26 0 20 1.75 35 28 7 0 0 0
.......................TCGAGATCGCCAGTCTGGAAAGGT................................................................................................................................................ 24 0 20 1.50 30 29 0 0 0 1
...................................................................................................................................................................TCAATGAAGCGGAGGTGAGCGTTGT... 25 0 20 1.40 28 28 0 0 0 0
.......................................................................GGAGTCACGTTCTCTCGAGTCGT................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
........................CGAGATCGCCAGTCTGGAAAGGTAG.............................................................................................................................................. 25 0 20 0.95 19 1 18 0 0 0
.....TGTCTACAGGAAGTTGGTTCGAGAT................................................................................................................................................................. 25 0 20 0.90 18 18 0 0 0 0
....................................................................................................................TAGGACGCAGGAGGCTAAGAAGGT................................................... 24 0 20 0.75 15 0 14 0 0 1
..................................................................................................................................CTAAGAAGGTCGTCGGGAGTACATT.................................... 25 0 20 0.55 11 11 0 0 0 0
....GTGTCTACAGGAAGTTGGTTCGAGAT................................................................................................................................................................. 26 0 20 0.35 7 0 7 0 0 0
................AGTTGGTTCGAGATCGCCAGTCTGGA..................................................................................................................................................... 26 0 20 0.35 7 2 5 0 0 0
...............................................................................................................................................CGGGAGTACATTTGCACCCTTCAAT....................... 25 0 20 0.35 7 6 1 0 0 0
.....................GTTCGAGATCGCCAGTCTGGAAAGG................................................................................................................................................. 25 0 20 0.30 6 6 0 0 0 0
................................................................................................................................................................CCTTCAATGAAGCGGAGGTGAGCGT...... 25 0 20 0.30 6 0 6 0 0 0
..........ACAGGAAGTTGGTTCGAGATCGCCAGT.......................................................................................................................................................... 27 0 20 0.25 5 5 0 0 0 0
.....................................................................................................................................AGAAGGTCGTCGGGAGTACAT..................................... 21 0 20 0.25 5 5 0 0 0 0
......GTCTACAGGAAGTTGGTTCGAGATCGC.............................................................................................................................................................. 27 0 20 0.25 5 5 0 0 0 0
.....................................................................................................................AGGACGCAGGAGGCTAAGAAGGTCGT................................................ 26 0 20 0.25 5 5 0 0 0 0
...........................................................................TCACGTTCTCTCGAGTCGTGGACT............................................................................................ 24 0 20 0.20 4 4 0 0 0 0
...........................................................................................CGTGGACTACGAACATATTAAAGCTT.......................................................................... 26 0 20 0.20 4 4 0 0 0 0
................AGTTGGTTCGAGATCGCCAGTCTGG...................................................................................................................................................... 25 0 20 0.20 4 0 4 0 0 0
...........................................................................................................................................................TGGACCATTCAAAGAAGCG................. 19 3 20 0.20 4 0 0 4 0 0
.....................................................................................................................................AGAAGGTCGTCGGGAGTACATT.................................... 22 0 20 0.20 4 0 4 0 0 0
.............GGAAGTTGGTTCGAGATCGCCAGT.......................................................................................................................................................... 24 0 20 0.15 3 3 0 0 0 0
..................................................................................................................................TTAAGAAGGTCGTCGGGAGTACATT.................................... 25 1 20 0.15 3 2 1 0 0 0
.................................................................................TCTCTCGAGTCGTGGACTACGAACATAT.................................................................................. 28 0 20 0.15 3 0 3 0 0 0
..CGGTGTCTACAGGAAGTTGGT........................................................................................................................................................................ 21 0 20 0.15 3 0 3 0 0 0
.............................................................................................................................GGAGGCTAAGAAGGTCGTCGGGAGT......................................... 25 0 20 0.15 3 3 0 0 0 0
.TCGGTGTCTACAGGAAGTTGGTTCGA.................................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0
...................TGGTTCGAGATCGCCAGTCTGGAAAGG................................................................................................................................................. 27 0 20 0.10 2 0 0 0 2 0
.....................GTTCGAGATCGCCAGTCTGGAAAG.................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0
..............................................................................................GGACTACGAACATATTAAAGCTTAGGAC..................................................................... 28 0 20 0.10 2 2 0 0 0 0
..........................................................................................................................................GTCGTCGGGAGTACATTTGCACCCT............................ 25 0 20 0.10 2 0 2 0 0 0
..........................................................................................TCGTGGACTACGAACATATTAAAGCTT.......................................................................... 27 0 20 0.10 2 2 0 0 0 0
.......................................................................................................................GACGCAGGAGGCTAAGAAGGTCGT................................................ 24 0 20 0.10 2 0 2 0 0 0
....................................................................................................................TAGGACGCAGGAGGCTAAGAAGGTCGT................................................ 27 0 20 0.10 2 2 0 0 0 0
....................TTTTCGAGATCGCCAGTCTGGAAAGGT................................................................................................................................................ 27 2 20 0.05 1 1 0 0 0 0
.............GGAAGTTGCTTCGAGATCGCCAGTCT........................................................................................................................................................ 26 1 20 0.05 1 0 1 0 0 0
..................................................................................CTCTCGAGTCGTGGACTACGAACATAT.................................................................................. 27 0 20 0.05 1 1 0 0 0 0
.....................GTTCGAGATCGCCAGTCTGGAAAGGT................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................CGGAGTTGAGCGTTGTGAC 19 1 20 0.05 1 0 1 0 0 0
.....................................CTGGAAAGGTAGGCATTCGGCTT................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
................................................................................................ACTACGAACATATTAAAGCTTAGGAC..................................................................... 26 0 20 0.05 1 1 0 0 0 0
..............................CGCCAGTCTGGAAAGGTAGGCAT.......................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
..............................................................................................GGACTACGAACATATTAAAGCTT.......................................................................... 23 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................CGTCGGGAGTACATTTGCACC.............................. 21 0 20 0.05 1 1 0 0 0 0
................................................................................................................................GGCTAAGAAGGTCGTCGGGAGTGCAT..................................... 26 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................GCGGAGGTGAGCGTTGTGAC 20 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................GTTCAATGAAGCGGAGGTGAGCGTTGT... 27 1 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................TTCAATGAAGCGGAGGTGAGCGT...... 23 0 20 0.05 1 1 0 0 0 0
........................CGAGATCGCCAGTCTGGAAAGGTAGG............................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................AATGAAGCGGAGGTGAGCGTTGTGAC 26 0 20 0.05 1 1 0 0 0 0
..................TTGGTTCGAGATCGCCAGTCTGGA..................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
.....................................CTGGAAAGGTAGGCATTCGGCTTT.................................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................CGCTTCAATGAAGCGGAGGTGAGCGT...... 26 1 20 0.05 1 0 1 0 0 0
..........................................AAGGTATGCATTCGGCTTTTGGATG............................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
...............................................ATGCATTCGGCTTTTGGATGCCGT........................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................GAAGGTCGTCGGGAGTACATTTGCAC............................... 26 0 20 0.05 1 0 1 0 0 0
..........................AGATCGCCAGTCAGGAAAGGTAGGCAT.......................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
........CTACAGGAAGTTGGTTCGAGAT................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
.....................GTTCGAGATCGCCAGTCTGGAAA................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
..........................AGATCGCCAGTCCGGAAAGGTAGGCA........................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
................................CCAGTCTGGAAAGGTAGGCATTCGGCTT................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
............AGGAAGTTGGTTCGAGATCGCC............................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................ACATTTGCACCCTTCAATGAAGCG................. 24 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................GAAGCGGAGGTGAGCGTTG.... 19 0 20 0.05 1 1 0 0 0 0
..............GAAGTTGGTTCGAGATCGGCAGT.......................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0
...................................................................................TCTCGAGTCGTGGACTACGAACATAT.................................................................................. 26 0 20 0.05 1 1 0 0 0 0
....GTGTCTACAGGAAGTTGGTTCGAGA.................................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................ATGCTAAGAAGGTCGTCGGGAGTACATT.................................... 28 1 20 0.05 1 1 0 0 0 0
........................TGAGATCGCCAGTCTGGAAAGGTAG.............................................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0
.......................TCGAGATCGCCAGTCTGGAAAG.................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................TCAATGAAGCGGAGGTGAGCGT...... 22 0 20 0.05 1 1 0 0 0 0
......GTCTACAGGAAGTTGGTTCGAGA.................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0
..................TTGGTTCGAGATCGCCAGTCTGGAAAGG................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0
................................................................................................................ATCGGAGGACGCAGGAGG............................................................. 18 3 20 0.05 1 1 0 0 0 0
................................................................................................................................................GGGAGTACATTTGCACCCTTCAATG...................... 25 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................AGAAGGTCGTCGGGAGTACATTTG.................................. 24 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................GAGGCTAAGAAGGTCGTCGGGAGTACAT..................................... 28 0 20 0.05 1 0 0 0 1 0
..AGGTGTCTACAGGAAGTTGGT........................................................................................................................................................................ 21 1 20 0.05 1 0 1 0 0 0
..................................................................................................................................CTAAGAAGGTCGTAGGGAGTACATTT................................... 26 1 20 0.05 1 0 1 0 0 0
................................................................................................................................................................CCTTCAATGGAGCGGAGGTGAGCGT...... 25 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................GAAGGTCGTCGGGAGTACATTTGCACC.............................. 27 0 20 0.05 1 1 0 0 0 0
....................GGTTCGAGATCGCCAGTCTGGAAAGGA................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0
....................GGTTCGAGATCGCCAGTCTGGAAAGGTT............................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................AAGCGAAGGTTAGCGTTG.... 18 2 20 0.05 1 0 1 0 0 0
.........................GAGATCGCCAGTCTGGAAAGGTAGGCAT.......................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
....................................TCTGGAAAGGTAGGCATTCGGCTTT.................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................GAAGGTCGTCAGGAGTACATTT................................... 22 1 20 0.05 1 1 0 0 0 0
............AGGAAGTTGGTTCGAGATCGGCAGT.......................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.CCGGTGTCTACAGGAAGTTGGTTC...................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................AAAAAGAAGGTCGTCGGGAGTACATT.................................... 26 3 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................CAATGAAGCGGAGGTGAGCGTTGTGA. 26 0 20 0.05 1 1 0 0 0 0
....TTGTCTACAGGAAGTTGGTTCGAGA.................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0
..............................................................................................GGACTACGAACATGTTAAAGCTTAG........................................................................ 25 1 20 0.05 1 1 0 0 0 0
...................TGGTTCGAGATCGCCAGTTTGGA..................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004967:2891935-2892125 + dwi_4068 AGGCCACAGATGTCCTTCAACCAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TTTC----------------------------CATCCGTAAGCCGAAAACCTACGGCACCTCAGTGCAAGAGAGCTCAGCACCTGATGCTTGT---ATAATTTCGAATCC-------TGC---------------------------------------------------------------------------------------------------------------------GTC--------------CTCCG------------ATTCTTC-CAGCAGC------------------CCTCATGTAAACGTGGGAAGTTACTTCGCCTCCACTCGCAACACTG
droVir3 scaffold_12886:73568-73743 + AGGCGATAGAGGATGTACGACCTAC--------------------------------------------CGC-ACATACGCC-ACCC---------------------CAGTCCAAACCCACA--------------GGA-----------------------------------AAAGAGAACCACCTGAGAACAACATACAAGTTTT------------------------------------------------------------------------------GAACCCTCCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------ACCTAAGCTAATGTTCAAAACTACTTTTTCGCAAAGTCACATGGTG
droMoj3 scaffold_6541:242849-242911 + CTCCGACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTCCA---------------------GTTATGTCCAACGTCCAAACTTATTTGGCTGCCAACACACGAAGTG
dp5 Unknown_group_574:4521-4586 - CGAGTCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTTCCGAC---------------------GCGCCACCCAGCGTTCAGAATTATTTCGCCTCCGGCCAAAGAGCTG
droPer2 scaffold_307:12996-13115 - ACCTGCTGCACCGTGGCACTCCAGT--------------------------------------------T----TCCAGCCA-ATCC---------------------GTGCCCAATTCCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTGCTGAA---------------------GCTCAGCCTAGCGTTCAGAACTATTTCGCCTCCGGCAAAAGGGCGG
droAna3 scaffold_13469:612925-612963 + AAGCCATAGAGGATGTTAAACCCAG--------------------------------------------CT------------CTA--GCA--------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGA---------------------------
droBip1 scf7180000395037:780-1003 + AGACCATCGACGACGTCAGGCCTAG--------------------------------------------TGG-CTCCGTGCA-ATTT---------------------CCGCCAAGGTCGGGACTTCCTACTGCCCCTGCTCGGAGGCTCACTTCATACGAGACTCGA---------------------------------GTGGTTCCGGGTCAAAAGAGCTGCGATCTCTGTTCGAGGGAGGACCACCCCATTCGACCA-------------------------------------------------------------------------------------------------CCC---C------A---------------------T----ACGGCCCTGAGGATCAGTCGAATGTGCAGGTGTGTTTCGCTTCCGGGTCAGGAGCCG
droKik1 scf7180000300009:4770-5007 - AGTTCAGGGCAG------------------------------------------------------------------------TTT---------------------CCGTCAAGACCGACAGCTGCGAGCGTCCCAGTGCGCATGCTGAATTCCTACGGGGCCAGA---------------------------------GTGGCTCCGGCCCCAAGAGGGTGCGA-----------GGGAGAACCATCCTATTCGCCTATGTCCGCGTTTCCTTGAAATGGATGT----------------AGAT-GG--------------------------------TCG--------------CTCCG------------ACTATAT-TAGAAGAAAGCAGT----TTCTCAAGATCACTCAGATGTGCAAGTGTGCTTCGCTTCCGGCTCAAGAGCCG
droFic1 scf7180000454171:11473-11714 - AGGCAAAAAGCTGTGCCTGAACTGCTTCGCACGAGGACATCAGCTACGGGACTGTGACAGCACTCATAGTTG-CTT-------------------------------CA----------------------------CATGCCGCGGCCGCCATC------------------------------------------------------------------------------------------------------------------------------------ACACGCTACTTCATCGAGGTAACGCGTCTCCAACGCCCTCAACTCCAACTTCCGCGCCCAGATCAAGACCAACTACGACCGCTCCAGCGACTACCAGTGCC---------------------GCAACGTCCACGGTGCAAAATTATTTTGCCACGGGTCATAGATCCG
droEle1 scf7180000490468:9173-9261 - AGGCGATTGAGGATATGAAACCCAG--------------------------------------------AGA-CAGCAATCC-CTCTAACGCTAAGAGTCAACCCGTT------------------------------CCCAGGAAGCTCAACTCCTTCGAAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droRho1 scf7180000779045:18000-18161 + AGGCTATCGACGACATCAGGCCTAG--------------------------------------------CAGT---------TCGG--GCA--------------GTT------------------------------CATC-------------------------------------------------------------------------------------------------------------------------------------------------ACACCCTCCTGCACCTCGGAAATTCATTCGCGGCCGCTCTAATTCCGTCTGCGCCAGCCAGGTCTCGACCACCG---C------T---TACTACAA-GAGGCACG-G----ACGCCTCGGAGGATCACTC-------------------------------TGAGCCG
droBia1 scf7180000300222:265-306 - AGGCGATTGAGGATATGAAACCCAG--------------------------------------------CAC-CAGCAATCA-ATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droTak1 scf7180000414420:11233-11338 - AGGCGATTGAGGACATGAAACCAAG--------------------------------------------CCA-CAGCAATCA-CTCTACCACTAAGAGTCAACCCG------------------------------TCTCCAGGAAGCTCAGCTCCTTCGAAGCTAAG---------------------------------GTGGTCACGAAACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409571:16054-16188 + AGGCCATCGACGACGTCAGGCCTAG--------------------------------------------TGG-CTCCGGGCA-ATCT---------------------CCGCCTAGGTGGGGACTTCCTACTGCCCCTGCACGGAGGCTCAATTCGTACGAGGCTCGA---------------------------------GTGGTTCCGGGCCAAAAGGGATGCGATCTCTGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2RHet:1094045-1094118 - AAGCCATCGAAGAAATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------TTT------------------------------CCAAAAAGGCTTCAATCCTTCGAGACAAAG-----------GTCAGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droSim2 node_59495:239-272 + AAGCCATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_3:906942-906994 + AAGCCATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GTT------------------------------CCAAA--------------------------------------------------------------------------AAGCCTTCAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droYak3 v2_chrUn_6911:8441-8670 - AGGCCATCGATGATGTGTACCAGTC---------------------------------------------------------AGTCG--CA--------------CT----CCAAAGCGATGAAT-TCAAGTGGGCCCTCTAGAAAATTAAGTTCCTACGAGACAAAA---------------------------------GTGGCTCCAAAATCCAAAAGTTGCGACTTGTGCAACAAGGAAAACCATCCTCTCCGTGTGTGTCCGCGTATTCTCCAAATGTCGGT---------------------------------------------------------------------------TG------------ACTACAT-TAAACGGAAGCAGT----TA----TGCTT-------------AAACTGCTTT-----GCAAAGGGACATCA
droEre2 scaffold_4845:1266245-1266266 + AAGCGATTGAAGGTGTTCGACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AGGCCACAGATGTCCTTCAACCAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TTTC----------------------------CATCCGTAAGCCGAAAACCTACGGCACCTCAGTGCAAGAGAGCTCAGCACCTGATGCTTGT---ATAATTTCGAATCC-------TGC---------------------------------------------------------------------------------------------------------------------GTC--------------CTCCG------------ATTCTTC-CAGCAGC------------------CCTCATGTAAACGTGGGAAGTTACTTCGCCTCCACTCGCAACACTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................CCAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TT............................................................................................................................................................................................................................................................................................................................................................23200.45909000
.........ATGTCCTTCAACCAAG--------------------------------------------CTC-TAGCGGTCA-....................................................................................................................................................................................................................................................................................................................................................................................28200.25505000
.........................................................................................................................................................................TGCAAGAGAGCTCAGCACCTGATGCT....................................................................................................................................................................................................................................................................26200.15300030
................................................................................................................................................................................................GCTTGT---ATAATTTCGAATCC-------TGC---------------------------------------------------------------------------------------------------------------------GTC--------------C...............................................................................................27200.15303000
.........ATGTCCTTCAACCAAG--------------------------------------------CTC-TAG...........................................................................................................................................................................................................................................................................................................................................................................................22200.15303000
......................................................................TC-TAGCGGTCA-GACC------------------TTTC----------------------------CATCCG........................................................................................................................................................................................................................................................................................................................25200.15301020
.........ATGTCCTTCAACCAAG--------------------------------------------CTC-TAGCGG........................................................................................................................................................................................................................................................................................................................................................................................25200.15303000
....................CCAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TTTC----------------------------CA............................................................................................................................................................................................................................................................................................................................27200.15303000
.........ATGTCCTTCAACCAAG--------------------------------------------CTC-TAGC..........................................................................................................................................................................................................................................................................................................................................................................................23200.15303000
......CAGATGTCCTTCAACCAAG--------------------------------------------CTC-TAGCGG........................................................................................................................................................................................................................................................................................................................................................................................28200.10202000
..........TGTCCTTCAACCAAG--------------------------------------------CTC-TAGCGGTCA-....................................................................................................................................................................................................................................................................................................................................................................................27200.10202000
.........................................................................................................................................................................................................................................................................................................................................................................................TTCTTC-CAGCAGC------------------CCTCATGTAAACG.................................26200.10201010
..........TGTCCTTCAACCAAG--------------------------------------------CTC-TAGCGGTC......................................................................................................................................................................................................................................................................................................................................................................................26200.10202000
......................................................................TC-TAGCGGTCA-GACC------------------TTTC----------------------------CATCCGT.......................................................................................................................................................................................................................................................................................................................26200.10202000
....................................................................................................................................................................................TCAGCACCTGATGCTTGT---ATAATTTCGAA...................................................................................................................................................................................................................................................29200.05101000
...................................................................................GACC------------------TTTC----------------------------CATCCGTAAGCCGA................................................................................................................................................................................................................................................................................................................22200.05101000
....................................................................................ACC------------------TTTC----------------------------CATCCGTAAGCCGAA...............................................................................................................................................................................................................................................................................................................22200.05101000
..............CTTCAACCAAG--------------------------------------------CTC-TAGCGG........................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
....CACAGATGTCCTTCAACCAAG--------------------------------------------CTC-T.............................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...........................................................................................................TC----------------------------CATCCGTAAGCCGAAAACCTAC........................................................................................................................................................................................................................................................................................................24200.05101000
........................................................................................................................................................................................CACCTGATGCTTGT---ATAATTTCG.....................................................................................................................................................................................................................................................23200.05101000
..........................................................................................................................................................................................................TAATTTCGAATCC-------TGC---------------------------------------------------------------------------------------------------------------------GTC--------------CTCCG------------A..............................................................................25200.05100010
..................AACCAAG--------------------------------------------CTC-TAGCGGTCA-....................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
....................................................................................ACC------------------TTTC----------------------------CATCCGTAAGCCGAAAACC...........................................................................................................................................................................................................................................................................................................26200.05101000
.........................................................................................................................................................................TGCAAGAGAGCTCAGCACCTGATGCTTG..................................................................................................................................................................................................................................................................28200.05100010
.................................................................................A-GACC------------------TTTC----------------------------CATCCGTAAGCCGAAAACC...........................................................................................................................................................................................................................................................................................................28200.05101000
....CACAGATGTCCTTCAACCAAG--------------------------------------------CTC-..............................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...................................................................................................................................................................................................................ATCC-------TGC---------------------------------------------------------------------------------------------------------------------GTC--------------CTCCG------------ATTCTTC-CAG....................................................................25200.05101000
.......................................................................................................................................................................AGTGCAAGAGAGCTCAGCACCTGA........................................................................................................................................................................................................................................................................24200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................TCTTC-CAGCAGC------------------CCTCATGTAAACGT................................26200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTACTTCGCCTCCACTCGCA......23200.05101000
......................................................................................C------------------TTTC----------------------------CATCCGTAAGCCGAAAACCT..........................................................................................................................................................................................................................................................................................................25200.05101000
..............CTTCAACCAAG--------------------------------------------CTC-TAGCGGTCA-....................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
..........TGTCCTTCAACCAAG--------------------------------------------CTC-TAGCG.........................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
...................................................................................................................................................................................................TGT---ATAATTTCGAATCC-------TGC---------------------------------------------------------------------------------------------------------------------GTC--------------CTC.............................................................................................26200.05101000
.......................................................................................................................................................................................................................................................................................................................................................TC--------------CTCCG------------ATTCTTC-CAGCAGC------------------CCTCA.........................................26200.05101000
......CAGATGTCCTTCAACCAAG--------------------------------------------CTC-TAG...........................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
......................AAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TTTC----------------------------CA............................................................................................................................................................................................................................................................................................................................25200.05100010
....................CCAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TTT...........................................................................................................................................................................................................................................................................................................................................................24200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CCTCATGTAAACGTGGGAAGTTAC......................24200.05101000
............TCCTTCAACCAAG--------------------------------------------CTC-TAGCGGTCA-G...................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.........ATGTCCTTCAACCAAG--------------------------------------------CTC-TAGCGGT.......................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
...................................................................................................................................................................................................TGT---ATAATTTCGAATCC-------TGC---------------------------------------------------------------------------------------------------------------------GTC--------------CT..............................................................................................25200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTCGCCTCCACTCGCAACAC..23200.05101000
...........................................................................................................TC----------------------------CATCCGTAAGCCGAAAACCTACGGCA....................................................................................................................................................................................................................................................................................................28200.05101000
.............CCTTCAACCAAG--------------------------------------------CTC-TAGCGGTCA-....................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
....................CCAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TTTC----------------------------C.............................................................................................................................................................................................................................................................................................................................26200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................C------------------CCTCATGTAAACGTGGGAAGTTACT.....................26200.05101000
......CAGATGTCCTTCAACCAAG--------------------------------------------CTC-TAGC..........................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.....................CAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TT............................................................................................................................................................................................................................................................................................................................................................22200.05101000
................................................................................................................................................................................................GCTTGT---ATAATTTCGAATCC-------TG.......................................................................................................................................................................................................................................22200.05101000
................TCAACCAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TT............................................................................................................................................................................................................................................................................................................................................................27200.05101000
.....................CAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TTTC----------------------------CA............................................................................................................................................................................................................................................................................................................................26200.05101000
.......................................................................C-TAGCGGTCA-GACC------------------TTTC----------------------------CATCCG........................................................................................................................................................................................................................................................................................................................24200.05110000
..........TGTCCTTCAACCAAG--------------------------------------------CTC-TAGCGGT.......................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.............................................................................................................................................................................................GATGCTTGT---ATAATTTCGAATCC-------T........................................................................................................................................................................................................................................24200.05101000
...............................................................................................................................................................................................TGCTTGT---ATAATTTCGAATCC-------TGC---------------------------------------------------------------------------------------------------------------------GTC--------------C...............................................................................................28200.05101000
..............CTTCAACCAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------..............................................................................................................................................................................................................................................................................................................................................................27200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAAACGTGGGAAGTTACTTCGCCT...............27200.05101000
.............CCTTCAACCAAG--------------------------------------------CTC-TAGCGGTC......................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.........................................................................TAGCGGTCA-GACC------------------TTTC----------------------------CATCCGT.......................................................................................................................................................................................................................................................................................................................24200.05100010
........GATGTCCTTCAACCAAG--------------------------------------------CTC-TAGCGG........................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.....................CAAG--------------------------------------------CTC-TAGCGGTCA-GACC------------------TTT...........................................................................................................................................................................................................................................................................................................................................................23200.05101000
droVir3
AGGCGATAGAGGATGTACGACCTAC--------------------------------------------CGC-ACATACGCC-ACCC---------------------CAGTCCAAACCCACA--------------GGA-----------------------------------AAAGAGAACCACCTGAGAACAACATACAAGTTTT------------------------------------------------------------------------------GAACCCTCCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------ACCTAAGCTAATGTTCAAAACTACTTTTTCGCAAAGTCACATGGTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACT......................................................................251311.231460030310120010100000000000260400406112702305100000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAC.......................................................................24138.921160040100020000000000000000210350302012501606000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTT.....................................................................26138.691130060300000000100000000000170490302001301305100000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------..............................................2678.4359000000000000000000001000100160401060015060000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTT.....................................................................24138.0010400211000000000000000100313023114100110025071000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTA........................................................................23137.921030020300000000100000000000140290608021901601200000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACT......................................................................23137.08920020000000000000000030001602312000090011061000000000000000000000000
..............GTACGACCTAC--------------------------------------------CGC-ACATACGCC-AC..................................................................................................................................................................................................................................................................................................................................................................................2566.33380026100000000000000000000011210003001200000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTC....................................................................25136.23810020102000000000000000007018060201400150140000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTAC.......................................................................22133.92510010000000000000000020026011050506006070000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTA........................................................................21132.77360010001000000000000000003080120302004020000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCT.........................................................................22142.36330000200100000000000000000301113020050202100000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------A.............................................2772.2916000000000000000000000001202010006003010000000000000000000000000
..............GTACGACCTAC--------------------------------------------CGC-ACATACGCC-A...................................................................................................................................................................................................................................................................................................................................................................................24102.20220012000000000000000000000211210002010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTC....................................................................27132.0026002000000000000000000000080700000030204000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------..............................................2871.8613002000000000000000000000030500000010200000000000000000000000000
..............GTACGACCTAC--------------------------------------------CGC-ACATACGCC-....................................................................................................................................................................................................................................................................................................................................................................................23101.80180017000000000000000000000000100000000000000000000000000000000000
..............GTACGACCTAC--------------------------------------------CGC-ACATACGC......................................................................................................................................................................................................................................................................................................................................................................................22101.8018003000000000000000000000122213010010011000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTC..........................................................................21141.7124001000100000000000000000040603060020100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------ACC...........................................2971.299000000000000000000000000104000002001010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTT....................................................................25131.1515000000000000000000000000204010003002030000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------AC............................................2871.148000000000000000000000000103010001001010000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAC.......................................................................26130.9212007000000000000000000000110200000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTC..........................................................................23140.7911007010000000000000000000100100000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAT.......................................................................24130.699000000000000000000000000030400000010100000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCT.........................................................................24140.649008000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTC..........................................................................19140.578000000000000100000000000103010000000020000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCT.........................................................................20140.578000000000000000000000000002000100003020000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTA.....................................................................26130.547000000000000000000000000010300000010200000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTC.....................................................................24130.547000000000000000000000000000030111000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAA.......................................................................24130.466000000000000000000000000010400000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACT......................................................................27130.466005100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTT....................................................................27130.466001000000000000000000000000200000000101100000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTT...........................................................................20140.436000000000000000000000000010302000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTA....................................................................25130.385000000000000000000000000101000002000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTATA......................................................................25130.385001000000000000000000000000400000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTT.....................................................................28130.385005000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTA........................................................................24130.314001000000000000000000000000120000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTT...........................................................................22140.294002000000000000000000000000100010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------AAA...........................................2970.292000000000000000000000000002000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------..............................................2570.292000000000000000000000000000000000001010000000000000000000000000
...............TACGACCTAC--------------------------------------------CGC-ACATACGCC-ACCC---------------------C..........................................................................................................................................................................................................................................................................................................................................................2740.251000000000000000000000000000000000000000000000000000000000000001
..............GTACGACCTAC--------------------------------------------CGC-ACATACGCC-ACC.................................................................................................................................................................................................................................................................................................................................................................................2640.251000100000000000000000000000000000000000000000000000000000000000
..............GTACGACCTAC--------------------------------------------CGC-ACATACGCC-ACCC---------------------...........................................................................................................................................................................................................................................................................................................................................................2740.251000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTT.....................................................................25130.233003000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTAA....................................................................25130.233000000000000000000000000003000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTA........................................................................25130.233002000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACT......................................................................26130.233001000000000000000000000000200000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTG....................................................................25130.233000000000000000000000000300000000000000000000000000000000000000
.............TGTACGACCTAC--------------------------------------------CGC-ACATACGCC-....................................................................................................................................................................................................................................................................................................................................................................................2490.222002000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTTCGTCTATACAGTCCA----------------------------------------------------------------CTTC..........................................................................22140.213001000000000000000000002000000000000000000000000000000000000000
..............GTACGACCTAC--------------------------------------------CGC-ACATACG.......................................................................................................................................................................................................................................................................................................................................................................................21100.202002000000000000000000000000000000000000000000000000000000000000
...............TACGACCTAC--------------------------------------------CGC-ACATACGC......................................................................................................................................................................................................................................................................................................................................................................................21100.202001100000000000000000000000000000000000000000000000000000000000
..............GTACGACCTAC--------------------------------------------CGC-ACATACGT......................................................................................................................................................................................................................................................................................................................................................................................22100.202000000100000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTTG.......................................................................24160.193000000000000000000000000000300000000000000000000000000000000000
..............GTACGACCTAC--------------------------------------------CGC-ACATAC........................................................................................................................................................................................................................................................................................................................................................................................20110.182000000000000000000000000101000000000000000000000000000000000000
......TAGAGGATGTACGACCTAC--------------------------------------------CGC-ACATA.........................................................................................................................................................................................................................................................................................................................................................................................2760.171000000000000000000000000000000100000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TCCTTCGTCTATACAGTCCA----------------------------------------------------------------C.............................................................................21120.172000000000000000000000000110000000000000000000000000000000000000
......TAGAGGATGTACGACCTAC--------------------------------------------CGC-ACAT..........................................................................................................................................................................................................................................................................................................................................................................................2660.171000000000000000000000000001000000000000000000000000000000000000
...............TACGACCTAC--------------------------------------------CGC-ACATACGCC-AC..................................................................................................................................................................................................................................................................................................................................................................................2460.171001000000000000000000000000000000000000000000000000000000000000
......TAGAGGATGTACGACCTAC--------------------------------------------CGC-ACA...........................................................................................................................................................................................................................................................................................................................................................................................2560.171000000000000000000000000000000010000000000000000000000000000000
......TAGAGGATGTACGACCTAC--------------------------------------------CGC-ACATC.........................................................................................................................................................................................................................................................................................................................................................................................2760.171000000000000000000000000000000000000001000000000000000000000000
......TAGAGGATGTACGACCTAC--------------------------------------------CGC-ACATAC........................................................................................................................................................................................................................................................................................................................................................................................2860.171000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTC....................................................................24130.152000010000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GTCTATACAGTCCA----------------------------------------------------------------CTTCTACT......................................................................22130.152001000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACA......................................................................23130.152000000000000100000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTATC......................................................................25130.152000000000000000000000000000000020000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTA.....................................................................24130.152000000000000000000000000001000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTG.....................................................................24130.152000000000000000000000000101000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACCC.....................................................................26130.152001000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTC.....................................................................26130.152000000000000000000000000000001010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GTCTATACAGTCCA----------------------------------------------------------------CTTCTAC.......................................................................21130.152001000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAC.......................................................................25130.152001000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAAA......................................................................25130.152000000000000000000000000000100000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAA.......................................................................26130.152000000000000000000000000000100000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................ATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------ACCA..........................................2570.141000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------T.............................................2770.141000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------AG............................................2870.141000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------GT............................................2870.141000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------AT............................................2870.141000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------G.............................................2770.141000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------AC............................................2770.141001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------A.............................................2370.141000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------TG............................................2870.141000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------TA............................................2870.141000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CTATACAGTCCA----------------------------------------------------------------CTTCTACTTCA---------------------..............................................2370.141001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTT........................................................................23150.132000000000000000000000000010000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CT............................................................................21150.132001010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTTA.......................................................................24150.132001000000000000000000000010000000000000000000000000000000000000
.......AGAGGATGTACGACCTAC--------------------------------------------CGC-..............................................................................................................................................................................................................................................................................................................................................................................................2180.131000000000000000000000000000000000000000000000000000000000000010
...CGATAGAGGATGTACGACCTAC--------------------------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................2380.131000000000000000000000000000000000000000100000000000000000000000
.............TGTACGACCTAC--------------------------------------------CGC-ACATACG.......................................................................................................................................................................................................................................................................................................................................................................................2290.111000000000000000000000000000000000000010000000000000000000000000
...............TACGACCTAC--------------------------------------------CGC-ACATACG.......................................................................................................................................................................................................................................................................................................................................................................................20100.101001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TTTT------------------------------------------------------------------------------GAACCCTCCTTCGTCTATACA...................................................................................................................................................25100.101000000000000000000000000000000000010000000000000000000000000000
................ACGACCTAC--------------------------------------------CGC-ACATACG.......................................................................................................................................................................................................................................................................................................................................................................................19100.101001000000000000000000000000000000000000000000000000000000000000
...............TACGACCTAC--------------------------------------------CGC-ACATACGCC-A...................................................................................................................................................................................................................................................................................................................................................................................23100.101001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CTCCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAC.......................................................................28100.101000000000000000000000000000000010000000000000000000000000000000
................ACGACCTAC--------------------------------------------CGC-ACATACGCC-....................................................................................................................................................................................................................................................................................................................................................................................21100.101001000000000000000000000000000000000000000000000000000000000000
..............GTACGACCTAC--------------------------------------------CGC-ACATACGCC-T...................................................................................................................................................................................................................................................................................................................................................................................24100.101000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CCTCCTTCGTCTATACAGTC................................................................................................................................................20110.091000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TCCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAC.......................................................................27110.091000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AACCCTCCTTCGTCTATACAGT.................................................................................................................................................22110.091000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CTCCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTC..........................................................................25110.091000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTAA.......................................................................22130.081000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................TCTATACAGTCCA----------------------------------------------------------------CTTCTACTTC....................................................................23130.081000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GTCTATACAGTCCA----------------------------------------------------------------CTTCTACTT.....................................................................23130.081000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACA......................................................................27130.081001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAAGG.....................................................................28130.081001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTATA......................................................................27130.081000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTAT....................................................................25130.081000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTC.....................................................................28130.081001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAAG......................................................................25130.081000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTA....................................................................27130.081000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTG....................................................................27130.081000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTACC......................................................................23130.081000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTA.....................................................................28130.081001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACT......................................................................24130.081000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTAT....................................................................27130.081000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACTTA....................................................................29130.081001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTATG......................................................................25130.081000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTATC......................................................................27130.081000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTACA......................................................................25130.081000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTAAC......................................................................25130.081000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGTCTATACAGTCCA----------------------------------------------------------------CTTCTAT.......................................................................22130.081000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCA.........................................................................24140.071001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................ATACAGTCCA----------------------------------------------------------------CTTCTACTTC....................................................................20140.071000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TATACAGTCCA----------------------------------------------------------------CTTCTACTTC....................................................................21140.071000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCT.........................................................................23140.071001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TATACAGTCCA----------------------------------------------------------------CTTCTACT......................................................................19140.071000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................ATACAGTCCA----------------------------------------------------------------CTTCTACT......................................................................18140.071001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTT........................................................................24150.071001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTCGTCTATACAGTCCA----------------------------------------------------------------C.............................................................................18150.071000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTTA.......................................................................26150.071001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------C.............................................................................20150.071000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCTTCGTCTATACAGTCCA----------------------------------------------------------------CTTCTT........................................................................25150.071001000000000000000000000000000000000000000000000000000000000000
droMoj3
CTCCGACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTCCA---------------------GTTATGTCCAACGTCCAAACTTATTTGGCTGCCAACACACGAAGTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTATGTCCAACGTCCAAACTTATTT....................2514.004300010
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTATGTCCAACGTCCAAACTTATTTGG..................2712.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAACTTATTTGGCTGCCAACACAC......2711.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTATGTCCAACGTCCAAACTTATTC....................2511.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCAACGTCCAAACTTATTT....................2311.001000010
............................................................................................................................................................................................................................................................................................................................................................................................ATACTCCA---------------------GTTATGTCCAACGTCC..............................24170.061000001
.TCCGACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTCCA---------------------GTTATGTCC.....................................25190.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTATGTCCAACGTCCAAAC..........................19200.051100000
dp5
CGAGTCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTTCCGAC---------------------GCGCCACCCAGCGTTCAGAATTATTTCGCCTCCGGCCAAAGAGCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAATTATTTCGCCTCCGG...........2230.6720200000000
CGAGTCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTTCCGAC---------------------GCGC..........................................2420.5010000010000
...................................................................................................................................................................................................................................................................................................................................................................................................C---------------------GCGCCACCCAGCGTTCAGAATTAT......................2530.3310000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAATTATTTCGCCTCCGGCCAAA......2730.3310100000000
...........................................................................................................................................................................................................................................................................................................................................................................................TCTTCCGAC---------------------GCGCCACCCAGCG.................................2250.2010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCGCCTCCGGCCAAAGAGCTG2560.1710100000000
droPer2
ACCTGCTGCACCGTGGCACTCCAGT--------------------------------------------T----TCCAGCCA-ATCC---------------------GTGCCCAATTCCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTGCTGAA---------------------GCTCAGCCTAGCGTTCAGAACTATTTCGCCTCCGGCAAAAGGGCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................TTCCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTGCTG.....................................................................26128.00286220000
....................................................................................................................TTCCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTGCT......................................................................2515.005140000
.....................................................................................................................TCCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTGCTG.....................................................................2512.002020000
....................................................................................................................TTCCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTGCTGA....................................................................2711.001010000
......................................................................................................................CCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTGCTG.....................................................................2411.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAACTATTTCGCCTCCGGCAAA.......26131.0013760000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAACTATTTCGCCTCCGG...........22200.75150150000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAACTATTTCGCCTCCGGCAC........25200.357700000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAACTATTTCGCCTCCGGC..........22200.255050000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAACTATTTCGCCTCCGGCAAAAG.....27130.233120000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAACTATTTCGCCTCCGGCAAAAG.....28130.152020000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAACTATTTCGCCTCCGGCAAAAGG....28120.081010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAACTATTTCGCCTCCGGCAAA.......25130.081100000
........................T--------------------------------------------T----TCCAGCCA-ATCC---------------------GTGCCCAATTCCGT.............................................................................................................................................................................................................................................................................................................................................28200.051010000
..CTGCTGCACCGTGGCACTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
....................................................................................................................TTCCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTGC.......................................................................24200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAACTATTTCGCCTCCGGCC.........24200.051010000
.................................................................................................................CAATTCCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTC...........................................................................23200.051010000
...................................................................................................................ATTCCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTGC.......................................................................25200.051010000
....................................................................................................................TTCCGTACCACTTCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTGG.......................................................................24200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAACTATTTCGCCTCCGG...........21200.051010000
droAna3
AAGCCATAGAGGATGTTAAACCCAG--------------------------------------------CT------------CTA--GCA--------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGA---------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AGACCATCGACGACGTCAGGCCTAG--------------------------------------------TGG-CTCCGTGCA-ATTT---------------------CCGCCAAGGTCGGGACTTCCTACTGCCCCTGCTCGGAGGCTCACTTCATACGAGACTCGA---------------------------------GTGGTTCCGGGTCAAAAGAGCTGCGATCTCTGTTCGAGGGAGGACCACCCCATTCGACCA-------------------------------------------------------------------------------------------------CCC---C------A---------------------T----ACGGCCCTGAGGATCAGTCGAATGTGCAGGTGTGTTTCGCTTCCGGGTCAGGAGCCGSizeHit CountTotal NormTotal
No Reads
droKik1
AGTTCAGGGCAG------------------------------------------------------------------------TTT---------------------CCGTCAAGACCGACAGCTGCGAGCGTCCCAGTGCGCATGCTGAATTCCTACGGGGCCAGA---------------------------------GTGGCTCCGGCCCCAAGAGGGTGCGA-----------GGGAGAACCATCCTATTCGCCTATGTCCGCGTTTCCTTGAAATGGATGT----------------AGAT-GG--------------------------------TCG--------------CTCCG------------ACTATAT-TAGAAGAAAGCAGT----TTCTCAAGATCACTCAGATGTGCAAGTGTGCTTCGCTTCCGGCTCAAGAGCCGSizeHit CountTotal NormTotal
No Reads
droFic1
AGGCAAAAAGCTGTGCCTGAACTGCTTCGCACGAGGACATCAGCTACGGGACTGTGACAGCACTCATAGTTG-CTT-------------------------------CA----------------------------CATGCCGCGGCCGCCATC------------------------------------------------------------------------------------------------------------------------------------ACACGCTACTTCATCGAGGTAACGCGTCTCCAACGCCCTCAACTCCAACTTCCGCGCCCAGATCAAGACCAACTACGACCGCTCCAGCGACTACCAGTGCC---------------------GCAACGTCCACGGTGCAAAATTATTTTGCCACGGGTCATAGATCCGSizeHit CountTotal NormTotal
No Reads
droEle1
AGGCGATTGAGGATATGAAACCCAG--------------------------------------------AGA-CAGCAATCC-CTCTAACGCTAAGAGTCAACCCGTT------------------------------CCCAGGAAGCTCAACTCCTTCGAAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droRho1
AGGCTATCGACGACATCAGGCCTAG--------------------------------------------CAGT---------TCGG--GCA--------------GTT------------------------------CATC-------------------------------------------------------------------------------------------------------------------------------------------------ACACCCTCCTGCACCTCGGAAATTCATTCGCGGCCGCTCTAATTCCGTCTGCGCCAGCCAGGTCTCGACCACCG---C------T---TACTACAA-GAGGCACG-G----ACGCCTCGGAGGATCACTC-------------------------------TGAGCCGSizeHit CountTotal NormTotal
No Reads
droBia1
AGGCGATTGAGGATATGAAACCCAG--------------------------------------------CAC-CAGCAATCA-ATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droTak1
AGGCGATTGAGGACATGAAACCAAG--------------------------------------------CCA-CAGCAATCA-CTCTACCACTAAGAGTCAACCCG------------------------------TCTCCAGGAAGCTCAGCTCCTTCGAAGCTAAG---------------------------------GTGGTCACGAAACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AGGCCATCGACGACGTCAGGCCTAG--------------------------------------------TGG-CTCCGGGCA-ATCT---------------------CCGCCTAGGTGGGGACTTCCTACTGCCCCTGCACGGAGGCTCAATTCGTACGAGGCTCGA---------------------------------GTGGTTCCGGGCCAAAAGGGATGCGATCTCTGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AAGCCATCGAAGAAATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------TTT------------------------------CCAAAAAGGCTTCAATCCTTCGAGACAAAG-----------GTCAGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........GAAATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------TT............................................................................................................................................................................................................................................................................................................................................................23221.0042000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010110000000000010005100000002000400020000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000110000000
...........................................................................................................T------------------------------CCAAAAAGGCTTCAATCCTTCGAGA....................................................................................................................................................................................................................................................................................................261813.442420000000000000000000001000000000000000020100010300000000001000000000000000000000000160010000000002000000000000010000000000000000000317211213030000020010000000000000000000000000000000400000000020050000102110200011040001101030124223217130000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000
........GAAGAAATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------T.............................................................................................................................................................................................................................................................................................................................................................25211.50230010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000020000000000001011401133000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000010000000
........GAAGAAATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------TT............................................................................................................................................................................................................................................................................................................................................................2628.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000010000000000000001000200000300000220010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
........GAAGAAATGAAACCGAC---------------------------------------------------------TCAG--GC.............................................................................................................................................................................................................................................................................................................................................................................2326.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022411001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................T------------------------------CCAAAAAGGCTTCAATCCTTCGAGACA..................................................................................................................................................................................................................................................................................................28174.768100000000000000000000000000000000000000000000000000000000022100000000000000000000005000000000000000000000000000000000000000000000000000000000001001000000100000000000000000000000000000000000000000000000000000000200001100013110656112000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AACCGAC---------------------------------------------------------TCAG--GCG--------------TTT------------------------------CCAAAAAGGC...................................................................................................................................................................................................................................................................................................................2723.5070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGCCATCGAAGAAATGAAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................2222.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAG--GCG--------------TTT------------------------------CCAAAAAGGCTTCAATC............................................................................................................................................................................................................................................................................................................2722.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................T------------------------------CCAAAAAGGCTTCAATCCTTCGA......................................................................................................................................................................................................................................................................................................24202.05410000000000000000000000000000000000000010000000000010000001000000000000000000000000000000000000001000000000000000000000000000000000112000010100000000000002000000000000000000000000000000000000000000000000000000000000400020844520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GAAGAAATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................2222.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAAATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------TTT------------------------------.............................................................................................................................................................................................................................................................................................................................2422.0040000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........GAAGAAATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------..............................................................................................................................................................................................................................................................................................................................................................2422.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................T------------------------------CCAAAAAGGCTTCAATCCTTCGAGAC...................................................................................................................................................................................................................................................................................................27181.61290000000000000000000000000000000000000000000000000010100003200000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000500021141230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GAC---------------------------------------------------------TCAG--GCG--------------TTT------------------------------CCAAAAAGGCT..................................................................................................................................................................................................................................................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAAATGAAACCGAC---------------------------------------------------------TCAG--GC.............................................................................................................................................................................................................................................................................................................................................................................2021.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCGAAGAAATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------..............................................................................................................................................................................................................................................................................................................................................................2621.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GAAGAAATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------TTT------------------------------.............................................................................................................................................................................................................................................................................................................................2721.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TT------------------------------CCAAAAAGGCTTCAATCCTTCGAGA....................................................................................................................................................................................................................................................................................................27181.50270000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000010000000000000000000000000000000000000000000000100000000100000000000200050004530000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................ACCGAC---------------------------------------------------------TCAG--GCG--------------TTT------------------------------CCAAAAAGGC...................................................................................................................................................................................................................................................................................................................2621.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................T------------------------------CCAAAAAGGCTTCAATCCTTCGAG.....................................................................................................................................................................................................................................................................................................25181.44260000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000500040222510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TTCGAGACAAAG-----------GTCAGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.20201.402800000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050002119000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AAGGCTTCAATCCTTCGAGACAAAG-----------GT..................................................................................................................................................................................................................................................................................27201.10220000000000000000000000000000000000000000020000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000110200000000000000000000000000000000000000003000000000000000000700100100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000
.....................................................................................................................................................TCAATCCTTCGAGACAAAG-----------GTCAGC..............................................................................................................................................................................................................................................................................25201.052100000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000201100203000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------TTT------------------------------CC...........................................................................................................................................................................................................................................................................................................................2321.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACCGAC---------------------------------------------------------TCAG--GCG--------------TTT------------------------------CCAAAAAGG....................................................................................................................................................................................................................................................................................................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
......TCGAAGAAATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------TT............................................................................................................................................................................................................................................................................................................................................................2821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAG--GCG--------------TTT------------------------------CCAAAAAGGCT..................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
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..............................................................................................................................................AAAGGCTTCAATCCTTCGAGACAAAG-----------GATC................................................................................................................................................................................................................................................................................30200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AGGCTTCAATCCTTCGAGAC...................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAGCCATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------267640.294482004411020302216633012883020163000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GC.............................................................................................................................................................................................................................................................................................................................................................................237178.1412470051326022639115239934100000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................227170.00119001230028444919124020000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------..............................................................................................................................................................................................................................................................................................................................................................247154.7110830041200884538238653041000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------G.............................................................................................................................................................................................................................................................................................................................................................257105.1473600694003732034232400135000
.....ATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GC.............................................................................................................................................................................................................................................................................................................................................................................26622.00132000000157115301000000
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------G.............................................................................................................................................................................................................................................................................................................................................................20714.291000000424200001078000
........GAAGATATGAAACCGAC---------------------------------------------------------TC...................................................................................................................................................................................................................................................................................................................................................................................19811.75940000562801306000000
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2179.436600002100000170217000
........GAAGATATGAAACCGAC---------------------------------------------------------T....................................................................................................................................................................................................................................................................................................................................................................................1899.3384001000131276000000
.......CGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GC.............................................................................................................................................................................................................................................................................................................................................................................2469.33560002004247143020000
.......CGAAGATATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................2368.33500011003202221000000
...........GATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2378.1457000000000057000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--...............................................................................................................................................................................................................................................................................................................................................................................2178.0056000027039673001000
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.......CGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------G.............................................................................................................................................................................................................................................................................................................................................................2662.001200000016020030000
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........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2681.631300300013312000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GG.............................................................................................................................................................................................................................................................................................................................................................................2371.571100000024140000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCA..................................................................................................................................................................................................................................................................................................................................................................................2081.251000000000208000000
........GAAGATATGAAACCGAC---------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................1791.111000000002017000000
.................AAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1791.111000000001009000000
......TCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------..............................................................................................................................................................................................................................................................................................................................................................2661.00600000000220020000
.AGCCATCGAAGATATGAAACCGAC---------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................2471.00700000000043000000
...............TGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1971.00700000000007000000
........GAAGATATGAAACCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1690.89800000011006000000
................GAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1870.86600000000006000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2670.86600000013001010000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GT.............................................................................................................................................................................................................................................................................................................................................................................2370.86600000020103000000
.....ATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------G.............................................................................................................................................................................................................................................................................................................................................................2860.83500000010120001000
..GCCATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................2850.80400000010030000000
.AGCCATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................2950.80400000004000000000
..............ATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2070.71500000000005000000
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------A.............................................................................................................................................................................................................................................................................................................................................................2070.71500000000000032000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------A.............................................................................................................................................................................................................................................................................................................................................................2570.71500000003011000000
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------T.............................................................................................................................................................................................................................................................................................................................................................2070.71500000000000041000
.......CGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------..............................................................................................................................................................................................................................................................................................................................................................2560.67400000000040000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------C.............................................................................................................................................................................................................................................................................................................................................................2570.57400000011011000000
.........AAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2570.57400010000201000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------A.............................................................................................................................................................................................................................................................................................................................................................2570.57400000040000000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCT--------------C.............................................................................................................................................................................................................................................................................................................................................................2570.57400000001102000000
....CATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................2660.50300000002010000000
.....ATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--...............................................................................................................................................................................................................................................................................................................................................................................2460.50300000012000000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------C.............................................................................................................................................................................................................................................................................................................................................................2570.43300000002010000000
..........AGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2470.43300000000003000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GAT--------------T.............................................................................................................................................................................................................................................................................................................................................................2570.43300000021000000000
...CCATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................2750.40200000000110000000
...CCATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GC.............................................................................................................................................................................................................................................................................................................................................................................2850.40200000002000000000
.....ATCGAAGATATGAAACCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1980.38300000003000000000
.....ATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------..............................................................................................................................................................................................................................................................................................................................................................2760.33200000001000010000
........GAAGATATGAAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................1590.33300000000012000000
.........AAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------G.............................................................................................................................................................................................................................................................................................................................................................2470.29200000000000020000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GA.............................................................................................................................................................................................................................................................................................................................................................................2370.29200000010001000000
............ATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------G.............................................................................................................................................................................................................................................................................................................................................................2170.29200000000002000000
.........AAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------..............................................................................................................................................................................................................................................................................................................................................................2370.29200010000000010000
.........AAGATATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------..............................................................................................................................................................................................................................................................................................................................................................2370.29200000000000020000
AAGCCATCGAAGATATGAAACCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2470.29200000000110000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GAG--------------C.............................................................................................................................................................................................................................................................................................................................................................2570.29200000000101000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCC--------------T.............................................................................................................................................................................................................................................................................................................................................................2570.29200100000100000000
.AGCCATCGAAGATATGAAACCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2370.29200000001010000000
............ATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------..............................................................................................................................................................................................................................................................................................................................................................2070.29200000000002000000
.............TATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................1780.25200000000002000000
.....ATCGAAGATATGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1680.25200000000002000000
..GCCATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--A..............................................................................................................................................................................................................................................................................................................................................................................2850.20100000000100000000
..GCCATCGAAGATATGAAACCGAC---------------------------------------------------------TCA..................................................................................................................................................................................................................................................................................................................................................................................2660.17100000000001000000
....CATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------..............................................................................................................................................................................................................................................................................................................................................................2860.17100000001000000000
....CATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3060.17100000001000000000
.AGCCATCGAAGATATGAAACCGAC---------------------------------------------------------TCA..................................................................................................................................................................................................................................................................................................................................................................................2760.17100000000010000000
......TCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................2460.17100000001000000000
.......CGAAGATATGAAACCGAC---------------------------------------------------------TCAG--...............................................................................................................................................................................................................................................................................................................................................................................2260.17100000001000000000
.....ATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--T..............................................................................................................................................................................................................................................................................................................................................................................2560.17100000001000000000
.......CGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------T.............................................................................................................................................................................................................................................................................................................................................................2660.17100000010000000000
................GAAACCGAC---------------------------------------------------------TCAG--GCA--------------GG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1870.14100000000001000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--T..............................................................................................................................................................................................................................................................................................................................................................................2270.14100000000001000000
..........AGATATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................2070.14100000000100000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--C..............................................................................................................................................................................................................................................................................................................................................................................2270.14100000001000000000
.AGCCATCGAAGATATGAAACCGAA---------------------------------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................2570.14100000000000010000
...CCATCGAAGATATGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.14100100000000000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GTT--------------T.............................................................................................................................................................................................................................................................................................................................................................2570.14100000000001000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GAT--------------..............................................................................................................................................................................................................................................................................................................................................................2470.14100000010000000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCC--------------..............................................................................................................................................................................................................................................................................................................................................................2470.14100000010000000000
..........AGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------G.............................................................................................................................................................................................................................................................................................................................................................2370.14100010000000000000
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------T.............................................................................................................................................................................................................................................................................................................................................................2070.14100000000000010000
.AGCCATCGAAGATATGAAACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14100000000001000000
...........GATATGAAACCGAC---------------------------------------------------------TCAG--GC.............................................................................................................................................................................................................................................................................................................................................................................2070.14100000010000000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--TA.............................................................................................................................................................................................................................................................................................................................................................................2370.14100000010000000000
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCG--------------..............................................................................................................................................................................................................................................................................................................................................................1970.14100100000000000000
AAGCCATCGAAGATATGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14100100000000000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCT--------------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2670.14100000010000000000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GGC--------------..............................................................................................................................................................................................................................................................................................................................................................2470.14100000001000000000
.........AAGATATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................2170.14100000010000000000
droSec2
AAGCCATCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GTT------------------------------CCAAA--------------------------------------------------------------------------AAGCCTTCAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GTT------------------------------CC...........................................................................................................................................................................................................................................................................................................................24200.651312001
............ATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GTT------------------------------C............................................................................................................................................................................................................................................................................................................................24200.3060060
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT............................................................................................................................................................................................................................................................................................................................................................26200.2044000
......TCGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT............................................................................................................................................................................................................................................................................................................................................................28200.2043100
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT............................................................................................................................................................................................................................................................................................................................................................21200.1530300
............ATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GTT------------------------------CC...........................................................................................................................................................................................................................................................................................................................25200.1530003
.......CGAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------G.............................................................................................................................................................................................................................................................................................................................................................26200.1022000
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GTT------------------------------CCA..........................................................................................................................................................................................................................................................................................................................25200.1022000
...........GATATGAAACCGAC---------------------------------------------------------TCAG--G..............................................................................................................................................................................................................................................................................................................................................................................19200.0511000
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GTT------------------------------CCAA.........................................................................................................................................................................................................................................................................................................................26200.0511000
.............TATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GTT------------------------------CCAAA--------------------------------------------------------------------------A.............................................................................................................................................................................................................................................28200.0511000
........GAAGATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------..............................................................................................................................................................................................................................................................................................................................................................24200.0511000
............ATATGAAACCGAC---------------------------------------------------------TCAG--GCA--------------GT............................................................................................................................................................................................................................................................................................................................................................22200.0510010
droYak3
AGGCCATCGATGATGTGTACCAGTC---------------------------------------------------------AGTCG--CA--------------CT----CCAAAGCGATGAAT-TCAAGTGGGCCCTCTAGAAAATTAAGTTCCTACGAGACAAAA---------------------------------GTGGCTCCAAAATCCAAAAGTTGCGACTTGTGCAACAAGGAAAACCATCCTCTCCGTGTGTGTCCGCGTATTCTCCAAATGTCGGT---------------------------------------------------------------------------TG------------ACTACAT-TAAACGGAAGCAGT----TA----TGCTT-------------AAACTGCTTT-----GCAAAGGGACATCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................TCCAAAATCCAAAAGTTGCGACTTG................................................................................................................................................................................................................................25120.17202000000000
..........................................................................................................T----CCAAAGCGATGAAT-TCAAGTGGGC...............................................................................................................................................................................................................................................................................................................................25100.10100100000000
droEre2
AAGCGATTGAAGGTGTTCGACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 09:26 AM