ID:

dwi_4061

 Coordinate:

scf2_1100000004967:2646965-2647115 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.0 -16.8 -16.8

Flybase annnotation

intron [Dwil\GK18552-in]; exon [dwil_GLEANR_18999:7]; CDS [Dwil\GK18552-cds]; intron [Dwil\GK18552-in]

No Repeatable elements found

Sense Strand Reads

--------------####################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAAATCTATTTCAGGTATTGATGGATATCAAAAAGGTTCAAATACAAACGGTAAGCAATTAATATTAATAACTGTACAGAGTCTAAGATCTTCAGTAGAAAGTTATTTTTATTCCCTACACTTATAGGTTGAAATTGTAAATAAAAGTTGTCATACTGTGTATAAGCAGATAAAGTAAATTTAATATTTTTGACACGTTCTCTCCAGCGCCCAGAATTAGAATAAAAACGATTTTCTTTTCCTATATTTAG
**************************************************....((((((((((..(((((((.((((((........)))...)))...)))))))..)))).((((......))))....))))))......((..(((((..((((......))))..((((((.......)))))))))))..))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 V118
embryo
 M020
head
.....................................................................AAGTGTACAGAGTCTAAGAT.................................................................................................................................................................. 20 1 1 1.00 1 1 0 0
...................................................................ATAACTGTACAGAGTCTAAGATC................................................................................................................................................................. 23 0 1 1.00 1 1 0 0
................ATTGATGGATATCAAAAAGGT...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0
...........ATGGTATTGATGGATATC.............................................................................................................................................................................................................................. 18 2 20 0.05 1 0 0 1

Anti-sense strand reads

TTTTAGATAAAGTCCATAACTACCTATAGTTTTTCCAAGTTTATGTTTGCCATTCGTTAATTATAATTATTGACATGTCTCAGATTCTAGAAGTCATCTTTCAATAAAAATAAGGGATGTGAATATCCAACTTTAACATTTATTTTCAACAGTATGACACATATTCGTCTATTTCATTTAAATTATAAAAACTGTGCAAGAGAGGTCGCGGGTCTTAATCTTATTTTTGCTAAAAGAAAAGGATATAAATC
**************************************************....((((((((((..(((((((.((((((........)))...)))...)))))))..)))).((((......))))....))))))......((..(((((..((((......))))..((((((.......)))))))))))..))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V119
head
...................................................................................................................................................................................................GCAAGAGAGTTCGCGGAAC..................................... 19 3 11 3.27 36 19 14 3
.......................................................................................................................................................................................................GAAAGGTGGCGGGTCTTA.................................. 18 2 6 0.17 1 1 0 0
.....................................................................................TCTAGAAGTCAGCTTTCG.................................................................................................................................................... 18 2 13 0.08 1 0 0 1
..................................................................................................................................................................................................TGCAAGAGAGTTCGCGGAA...................................... 19 3 14 0.07 1 1 0 0
..................................................................................................................GGATGTGAATAGCCGAATT...................................................................................................................... 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004967:2646915-2647165 - dwi_4061 AAAATCTATTTCAGGTATTGA---TGG----------A------TATCAAAAAGGTTCAAA------TA--CAAACGGTAAG----------------------CAATTAA------------------------------TATTAATAACTG-TACA-GAGTCTAAGATCTT----------------------------------------------------------CAGTAG------------------------------------------------AAAGTTA---------------------------------------------------TTTTTATTCCCTACACTTATAGGTTGAAATTGTAAATAAAAGTTGTCATACTGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAGCAGA-TAAAGTAAATTTAATATTTTTGACACGTTCTCTCCAGC-------------------------------------------------------------------------------------GCCCAGAATTAGAATAAAAACGATTTTCTTTTCCTATAT-TTAG
droVir3 scaffold_13047:6740660-6740829 + TTCGTTAATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA------------------------------------------------------------------TGTTTGTAATTCAAATGTATATAAATTTA---------------------------------------------------------AATTCGAAATGAACATTT----------------------------------------------------------------------TAATAATATATAATATGTAA----------------------------------------------------------------------------------------------CATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATGTAATATCTTAGATGTTATAAATCTCTTAATATTTTAACATTGCTTGA--------------------------------------T-----------------------------------------------------------------TTAAAAA-------AAT-----------------TA----------------------------GTTTT------------------------------------------------TTGCATGAT----TTCT
droMoj3 scaffold_6482:1088280-1088517 + AAAATATCGTATTTAAAAT--------AAAATCAAAGTTG---------------TTTATT------TA--TAATTAAGTAA-----------------------------------------------CAAAATTTTTTTTATTAATAACAG-TACA-AAAT------------------------------AAAGTAT-----------------------------------------------TAAAATTTAAGTTGTTAACTTTGAA-----------------------------------TTGCTACAATTATTTTAATCCCAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTAAATCACATTAGTCAGTATAGGAGGTTAGCTAG------------------------------------------------TA---T------------------------------------------------AGG-AGGTCAAG-AGG-----------------------------G--CGTGGTC---------------------AA-----------------------------------------------------------------ATCACACACATTTTTTTATTTTTATAC-CCTG
droGri2 scaffold_15126:7927919-7928081 + AAAAAAAAACAA-----------------------TAAAG----TACTTTCATG--------------------------------------------------------------------------------------------TTAATTA-CACA-AATTTAAGTAGTCT----------------------------------------------------------GAATAT------------------------------------------------AAAACCC---------------------------------------------------TATTATTATTTAATTAATAAAGTTTAAGATTGCAAATAAAAGTTACAAAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAA------------------------T------------------------TTATAAA-GAAAATGAAATCA--------------------------------------------------CTT--------------------------------------------------------------------------------TCTATTATATGTT----TTTT
dp5 2:22998653-22998845 - GTACACATTTATTGAT--T------------ATAAG------------------------------------------------------------------------------------------------------------------------CA-TAGCTTAGGATTCT----------------------------------------------------------TACTAA------------------------------------------------GAAGATT---------------------------------------------------TTATTGTACTTCATACT---------------------------------------------------------------------------------------TTAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTAACGAGAGGCTGAAATAGTGCGGTACCAGTCTGTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------GTGTTCA-TGAGATGAAGCTG-----------------------------------------------------------------------------CTCTTGA-----AACATCCTTTTTATACCCGATACTCAAAATCAGTATAGGG----------------GTATATTAG
droPer2 scaffold_9:949738-950031 + AAAATCAAGAATAACAAAT--------ATAGTAATAATTATTCA------GTAAAAATCAA------GA------------------------ATA--------------------------------------------------ATAATTA-TACA-A--------------------------------------------------------------------------TAA------------------------------------------------AAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------AAGTAATAATTATTCAATAAAAAT------CAAGAATAATAATTATA--------ATTAATTATATATATAATATAAT---------------------TATAATAAATAATAATTTATTGAGTAATGATTATTTTTT--------------------------------------------------------------------ACTTTTAGTGTGCAGTTAT--TATTTTGGATTTTTATTGTACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------ATAATTA-TTATTTTTGATTT-----------------------------------------------------------------------------TTATTGT-----ATAATTATTATTATACCCAATGCTCAAAATGAGTATAGGG----------------GTAT-TTAG
droAna3 scaffold_13280:1264224-1264500 + TTGATATGTGGCAAAAATGA---------------CAGAA----TTTTTGTAAGT------TGTACCGA--A------A---------------------------------------------------AA-CTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCCAAATCCGAAAAACACGAACAAAAGTCGAAAACTTCAGTTTCAGATGTAAAAATTTTGTTCTTTTTGTTTAACAAA----ATC-----GAAGATATATTTTTTTTTAAAAAGCT--------------------------ACAACATTTCACTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAAAACACCAAAAATTTTGAAATCGGTTGA--------------------------------------AAAAAACGCGTTCAGGAATTTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------AAACGGTTTTTTATACCCTTGC-AGAG
droBip1 scf7180000395579:1506-1741 + AAGATTTATTTTGTAA---------------TTAAGAGTA------ATTAAGAGCATTAAA------TA------------------------AGAGAATTAAGTAATTAGCATTATTAAG---------------------------------TACA-TATTCCATGAATTC------CATGAAA-----CTTTTTTTTTGTATTAAGT--TTTTTTTATAAATAAATTTGAATAC------------------------------------------------AATGTCC---------------------------------------------------T---------------------------------------------TAATA--------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------TTTTGTTATTTTTTATTTCAAAGAACTTAAATAAAAGTTGCTTGAGAGTGGGTATAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------ATTT--------------------------------------GTTGTTATACCCTTGC-AGAG
droKik1 scf7180000302685:430349-430649 + AATATTTATTTTAATTTAA-T---TGA----------A------TTTCAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTCTGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATTAAATAAAAACTGGGAAAATTTGGATATATTATATTAATATGTGAATAAATTTATTGAAAATTCACTATGGATATTAAATTATAAATTTTAAAAATTTTTATATAAATTTAAAAATTTTTATATAAATTTAAAAAATTTTTATATAAATTTAAAAAATTTTAT---------------------------------------------------------------------------------------------ATAAATTTTATATTTTATATATA------------------TATTCAA---------------------------------------------T--ATTAAAT---------------------TATAAATAAAAAATTTTTTTAT-------ATATTTTATAT--------------------------------------ATTATTATACCCTTGC---AG
droFic1 scf7180000454166:8823-9054 + ATAATTTCATAAAATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAAAAAAAGAAATCCTATCACTTAGAAGGTGGCATAGATATTTTTGTGCATAATTTATGCATCTTAATCGAAAACAATCAAAAAAGTAA---------------------------------------------CTTAA----ACAAACATTTCGTTAAATTTTGTCGCACAG----------------------------------------------------------------------------------------------TGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAACAAATTAATAATACTG--------------------TGGTAAAAGTTCTCCATTACCCAG------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAGAGTAA------AT--ATAATTTTTTACTAATAT-ATAA
droEle1 scf7180000490129:5090-5371 + AAACTTTATTTCAGTTAAT--------ATTGTCAATAATA---------------TTTTAA------TAGCTCAATCTTAAGGAAATATATTTAATAAATGTGGTATTTAATATTTTTAAATTTAAATCCAACATTATTCGTATTAATATCTATGTTT-----------------------------------AAAGTATTATATTGAAAGTGCT-----------------------------------------------CAATGTTCAA-----------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAT--------ATTAATCATATATACGTTACAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACTTTAAATTTATTTTTGTCACTTTAATTATCATTCATATTTAATTTAAA---------------------------------------------------------------------------------------------------------------G---------------------------------T--TGTAGTC---------------GATTCCG----------------------------A------------------------------------------------TTTAAGGTTCGCATTT-TTAT
droRho1 scf7180000778210:6282-6490 + AAATATTAATTTATTTATTGT---TAA----------A------TATT---------------------------CGTTAAT-------------------------TTATTAA----------------------------------------TACA-AAATCTAAATACTG----------------------------------------------------------CAGCAGAAATAATAATAATAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAA---------------------------------------------CCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATATTTAGTTTAGTTTTCTTACATTTACCGGCAAACAAAAATAATTTAAAAATTCGA--------------------TGCTATTTTT--------------------------------------T-----------------------------------------------------------------CTACCGC-------CAC-----------------TG----------------------------TATTT----TC---------------------------------ATGGGATTTTTATACCCTTGC-AGAG
droBia1 scf7180000302291:657362-657603 + AATAACCATATAAGTCATGGAAAACGG----------A------TATAAAAAAACTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCATAATGGGCAAATAAGTAT------ACACAATTCTAAGCATATTCTTCTTATTCATTATGTTCATAATA----ATA-----AAGGTCAGGTATTTCCGCATAGAAATGGTTAACTTAAAA-------------GTCATATTTCAGTATTAGAGACTTCAAACGTTGTGATCAGAAAATAAGGAATATTGTATAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAT-----------------------T--------------------------------------TTTAAAATTTTTATAT-TTAT
droTak1 scf7180000414393:326393-326647 + GTAACCGGAGACGGGCACT--------GTGGTAAAAGGGTTGCA------AAAAAATTGAA------AA------------------------ATGGAAGTACCTAATC----------------------------------TA-AGAATTA-TTTAAAATTTAAATAATCTAAGGTCTTGGAAATAACTTTTATTTATTGTATTAAAAATCTGCAATATAAATAAGA--CAGTATATATTAGAATTAGAATTTGAACTGATGGAATTTAA-----------------------------------TA-----AATTATTTTAAATTTAAATAAATCTAGTACCCTTCTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA---------ATTAT----------------------------------------------------------------TTACAAATTTATGT-TTTT
droEug1 scf7180000408984:139934-140114 + TAATGAGTTTTTAGAT-------------------------------------AT------TTTAAAGA--C------C---------------------------------------------------AA-CTGAAATGTATTAATAATTGTTACA-AAG----------------------------------TTGTTACATTTCG-----------------------------------------------------------TCAGGTTGAAACTTAAATATAATACGTTGGCAATGATACCA-----TATATATATATATATATATAGATTTGACATTTTTATACCCGTTACTCGTAGAGTAAAAGGGTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAG
dm3 chrU:1182333-1182412 - AATCTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTACCCGTTACTCGTAGAATGAAACGGTACACAAAGTTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-CAAAATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------AT
droSim2 x:20493491-20493564 - ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATACCCGTTACTCGTAGAGTAAAATGGTATACTAAATTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAC-AGGCTGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------GGAA
droSec2 scaffold_11331:450-575 - CCTATGAATTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTATATAAAGAATTCGATATTGTTAATATTATTATGAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATTTCGTGTT------------------------------------------------------------------------------------------------------------------------------CACCTCAGCATCCTTAGTCATGTATTAGCAAGTGATTTCA----------------------------ATTTC------------------------------------------------ATGTTGGTA----GTTA
droYak3 v2_chrUn_1052:596-777 + GGTGGAAATCAA--------------------------------------AAAAAATCGAT------TT--TTAAGGGCAGG----------------------CAATCGA------------------------------TATAAATTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAAAGCGTTTACCCTT---------------------TTCATTGAAT----------------------------------------------------------------------------------------------------------------------------------------------ATAGTTAGTTTTAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTACACAAA-GGGTAAGG---------------------------------------------------------------------------------------------GTGGAAATCGAAAAAAAAATCGA------------------TTTTTAA---------------------------------------------G--GGTAGGC---------------------AATCGATACAAATTAT----------------------------------------------------------------TTTTAAAG-------CGTT
droEre2 scaffold_4929:25864816-25864891 + TCAATAAAAATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTTTATACCCGTTACTCGTAGAGTGAAAGGGTATACTAGATTCGTTGAATAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AAAATCTATTTCAGGTATTGA---TGG----------A------TATCAAAAAGGTTCAAA------TA--CAAACGGTAAG----------------------CAATTAA------------------------------TATTAATAACTG-TACA-GAGTCTAAGATCTT----------------------------------------------------------CAGTAG------------------------------------------------AAAGTTA---------------------------------------------------TTTTTATTCCCTACACTTATAGGTTGAAATTGTAAATAAAAGTTGTCATACTGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAGCAGA-TAAAGTAAATTTAATATTTTTGACACGTTCTCTCCAGC-------------------------------------------------------------------------------------GCCCAGAATTAGAATAAAAACGATTTTCTTTTCCTATAT-TTAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................ATAACTG-TACA-GAGTCTAAGATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
................ATTGA---TGG----------A------TATCAAAAAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
droVir3
TTCGTTAATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA------------------------------------------------------------------TGTTTGTAATTCAAATGTATATAAATTTA---------------------------------------------------------AATTCGAAATGAACATTT----------------------------------------------------------------------TAATAATATATAATATGTAA----------------------------------------------------------------------------------------------CATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATGTAATATCTTAGATGTTATAAATCTCTTAATATTTTAACATTGCTTGA--------------------------------------T-----------------------------------------------------------------TTAAAAA-------AAT-----------------TA----------------------------GTTTT------------------------------------------------TTGCATGAT----TTCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AAAATATCGTATTTAAAAT--------AAAATCAAAGTTG---------------TTTATT------TA--TAATTAAGTAA-----------------------------------------------CAAAATTTTTTTTATTAATAACAG-TACA-AAAT------------------------------AAAGTAT-----------------------------------------------TAAAATTTAAGTTGTTAACTTTGAA-----------------------------------TTGCTACAATTATTTTAATCCCAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTAAATCACATTAGTCAGTATAGGAGGTTAGCTAG------------------------------------------------TA---T------------------------------------------------AGG-AGGTCAAG-AGG-----------------------------G--CGTGGTC---------------------AA-----------------------------------------------------------------ATCACACACATTTTTTTATTTTTATAC-CCTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------------AGG-AGGTCAAG-AGG-----------------------------G--CGTGG..........................................................................................................................2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCACATTAGTCAGTATAGGAGG.............................................................................................................................................................................................................................................................................................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAATCACATTAGTCAGTATAGGAG..............................................................................................................................................................................................................................................................................................2711.001100000
droGri2
AAAAAAAAACAA-----------------------TAAAG----TACTTTCATG--------------------------------------------------------------------------------------------TTAATTA-CACA-AATTTAAGTAGTCT----------------------------------------------------------GAATAT------------------------------------------------AAAACCC---------------------------------------------------TATTATTATTTAATTAATAAAGTTTAAGATTGCAAATAAAAGTTACAAAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAA------------------------T------------------------TTATAAA-GAAAATGAAATCA--------------------------------------------------CTT--------------------------------------------------------------------------------TCTATTATATGTT----TTTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
GTACACATTTATTGAT--T------------ATAAG------------------------------------------------------------------------------------------------------------------------CA-TAGCTTAGGATTCT----------------------------------------------------------TACTAA------------------------------------------------GAAGATT---------------------------------------------------TTATTGTACTTCATACT---------------------------------------------------------------------------------------TTAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTAACGAGAGGCTGAAATAGTGCGGTACCAGTCTGTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------GTGTTCA-TGAGATGAAGCTG-----------------------------------------------------------------------------CTCTTGA-----AACATCCTTTTTATACCCGATACTCAAAATCAGTATAGGG----------------GTATATTAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------------------------------------TTAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTAACGAGAGGCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000300
.......................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------------------------------------TTAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTAACGAGAGGCTGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000300
...............................................................................................................................................................................................................................................................................................................................................................CTTCATACT---------------------------------------------------------------------------------------TTAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTAACGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000200
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATCAGTATAGGG----------------GTATA....2130.3310000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAATCAGTATAGGG----------------G........1840.2510000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATACCCGATACTCAAAAT...................................21200.0510100000000
droPer2
AAAATCAAGAATAACAAAT--------ATAGTAATAATTATTCA------GTAAAAATCAA------GA------------------------ATA--------------------------------------------------ATAATTA-TACA-A--------------------------------------------------------------------------TAA------------------------------------------------AAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------AAGTAATAATTATTCAATAAAAAT------CAAGAATAATAATTATA--------ATTAATTATATATATAATATAAT---------------------TATAATAAATAATAATTTATTGAGTAATGATTATTTTTT--------------------------------------------------------------------ACTTTTAGTGTGCAGTTAT--TATTTTGGATTTTTATTGTACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------ATAATTA-TTATTTTTGATTT-----------------------------------------------------------------------------TTATTGT-----ATAATTATTATTATACCCAATGCTCAAAATGAGTATAGGG----------------GTAT-TTAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TTGATATGTGGCAAAAATGA---------------CAGAA----TTTTTGTAAGT------TGTACCGA--A------A---------------------------------------------------AA-CTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCCAAATCCGAAAAACACGAACAAAAGTCGAAAACTTCAGTTTCAGATGTAAAAATTTTGTTCTTTTTGTTTAACAAA----ATC-----GAAGATATATTTTTTTTTAAAAAGCT--------------------------ACAACATTTCACTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAAAACACCAAAAATTTTGAAATCGGTTGA--------------------------------------AAAAAACGCGTTCAGGAATTTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------AAACGGTTTTTTATACCCTTGC-AGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAATCGGTTGA--------------------------------------AAAAAAC.................................................................................................................................................................................................21201.85370000037
................................................TGTAAGT------TGTACCGA--A------A---------------------------------------------------AA-CTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27201.75350350000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAATCGGTTGA--------------------------------------AAAAA...................................................................................................................................................................................................19201.40280000028
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGA--------------------------------------AAAAAACGCGTTCAGG........................................................................................................................................................................................20201.20240000240
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGAATTTTTAA---------------------------------------------G--CGCA...........................................................................................................................20201.15230000230
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAA----ATC-----GAAGATATATTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.5010000109
..................GA---------------CAGAA----TTTTTGTAAGT------TGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.50100000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA--------------------------------------AAAAAACGCGTTCAGGA.......................................................................................................................................................................................20200.459000900
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGA--------------------------------------AAAAAACGCGTTCAGGA.......................................................................................................................................................................................21200.459000900
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------...........................25200.408080000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGA--------------------------------------AAAAAACGCGTTCAGG........................................................................................................................................................................................22200.408800000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------A..........................24200.408080000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCGTTCAGGAATTTTTA................................................................................................................................................................................21200.357000007
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------A..........................25200.357070000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA--------------------------------------AAAAAACGCGTTCAGGAA......................................................................................................................................................................................21200.357000700
...................................................AAGT------TGTACCGA--A------A---------------------------------------------------AA-CTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.255050000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGAAATCGGTTGA--------------------------------------AAAAAA..................................................................................................................................................................................................22200.204000004
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGAAAAACACGAACAAAAGTCGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.204040000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTGAAATCGGTTGA--------------------------------------AAAA....................................................................................................................................................................................................22200.204000004
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAATTTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCC.........................................................................27200.204040000
....................................................AGT------TGTACCGA--A------A---------------------------------------------------AA-CTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.204400000
..GATATGTGGCAAAAATGA---------------CAGAA----TTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.153030000
.TGATATGTGGCAAAAATGA---------------CAGAA----T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153120000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT--------------------------ACAACATTTCACTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAAAACACC...................................................................................................................................................................................................................................................................28200.153030000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTTTCAGATGTAAAAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000002
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGGTTGA--------------------------------------AAAAAACGC...............................................................................................................................................................................................19200.102200000
.....................................................GT------TGTACCGA--A------A---------------------------------------------------AA-CTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCCGAAAAACACGAACAAAAGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102020000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----.................................................................24200.102020000
...............................................................TACCGA--A------A---------------------------------------------------AA-CTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA--------------------------------------AAAAAACGCGTTCAGGAAT.....................................................................................................................................................................................22200.102000020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAAAAACACGAACAAAAGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102020000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTAAAAAGCT--------------------------ACAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTAACAAA----ATC-----GAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------AA.........................25200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAACGCGTTCAGGAATTTTTAA---------------------------------------------G--C..............................................................................................................................27200.051000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAATTTTTAA---------------------------------------------G--CGCAAA.........................................................................................................................20200.051000001
.............AAAATGA---------------CAGAA----TTTTTGTAAGT------TG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTTGA--------------------------------------AAAAAACGCGTTCAGG........................................................................................................................................................................................24200.051100000
.......................................A----TTTTTGTAAGT------TGTACCGA--A------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACAAA----ATC-----GAAGATATAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GT...........................................................................21200.051000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCC.........................................................................24200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAAACACCAAAAATTTTGAAATC....................................................................................................................................................................................................................................................26200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----.................................................................27200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------AAA........................24200.051010000
...................A---------------CAGAA----TTTTTGTAAGT------TGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA--------------------------------------AAAAAACGCGTTCAGGT.......................................................................................................................................................................................20200.051000100
................................................TGTAAGT------TGTACCGA--A------A---------------------------------------------------AA-C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------AA.........................26200.051010000
....................................AGAA----TTTTTGTAAGT------TGTACCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
...............................................TTGTAAGT------TGTACCGA--A------A---------------------------------------------------AA-CT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
......TGTGGCAAAAATGA---------------CAGAA----TT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAATTTTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GC...........................................................................25200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAAAGTCGAAAACTTCAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTTTCAGATGTAAAAATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA--------------------------------------AAAAAACGCGTTCAGT........................................................................................................................................................................................19200.051000010
...ATATGTGGCAAAAATGA---------------CAGAA----TTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGA--------------------------------------AAAAAACGCGTTCAG.........................................................................................................................................................................................19200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGA--------------------------------------AAAAAACGCGTTCAGGT.......................................................................................................................................................................................23200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACAAA----ATC-----GAAGATATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTTGAAATCGGTTGA--------------------------------------AT......................................................................................................................................................................................................21200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTTTGAAATCGGTTGA--------------------------------------AA......................................................................................................................................................................................................22200.051100000
.................................................GTAAGT------TGTACCGA--A------A---------------------------------------------------AA-CTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACACGAACAAAAGTCGAAAACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
.................TGA---------------CAGAA----TTTTTGTAAGT------TGTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------AAACGGTT...................29200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------AAACGGTT...................25200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAA---------------------------------------------G--CGCAAAC---------------------AA--------------------GTCCCGA-----A-------------------------------------...........................23200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACACGAACAAAAGTCGAAAACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
...............AATGA---------------CAGAA----TTTTTGTAAGT------TGTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
..GATATGTGGCAAAAATGA---------------CAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGAAAAACACGAACAAAAGTCGAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGTAAAAATTTTGTTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACACGAACAAAAGTCGAAAACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
droBip1
AAGATTTATTTTGTAA---------------TTAAGAGTA------ATTAAGAGCATTAAA------TA------------------------AGAGAATTAAGTAATTAGCATTATTAAG---------------------------------TACA-TATTCCATGAATTC------CATGAAA-----CTTTTTTTTTGTATTAAGT--TTTTTTTATAAATAAATTTGAATAC------------------------------------------------AATGTCC---------------------------------------------------T---------------------------------------------TAATA--------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------TTTTGTTATTTTTTATTTCAAAGAACTTAAATAAAAGTTGCTTGAGAGTGGGTATAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------ATTT--------------------------------------GTTGTTATACCCTTGC-AGAGSizeHit CountTotal NormTotal
No Reads
droKik1
AATATTTATTTTAATTTAA-T---TGA----------A------TTTCAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTCTGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATTAAATAAAAACTGGGAAAATTTGGATATATTATATTAATATGTGAATAAATTTATTGAAAATTCACTATGGATATTAAATTATAAATTTTAAAAATTTTTATATAAATTTAAAAATTTTTATATAAATTTAAAAAATTTTTATATAAATTTAAAAAATTTTAT---------------------------------------------------------------------------------------------ATAAATTTTATATTTTATATATA------------------TATTCAA---------------------------------------------T--ATTAAAT---------------------TATAAATAAAAAATTTTTTTAT-------ATATTTTATAT--------------------------------------ATTATTATACCCTTGC---AGSizeHit CountTotal NormTotal
No Reads
droFic1
ATAATTTCATAAAATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAAAAAAAGAAATCCTATCACTTAGAAGGTGGCATAGATATTTTTGTGCATAATTTATGCATCTTAATCGAAAACAATCAAAAAAGTAA---------------------------------------------CTTAA----ACAAACATTTCGTTAAATTTTGTCGCACAG----------------------------------------------------------------------------------------------TGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAAACAAATTAATAATACTG--------------------TGGTAAAAGTTCTCCATTACCCAG------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAGAGTAA------AT--ATAATTTTTTACTAATAT-ATAASizeHit CountTotal NormTotal
No Reads
droEle1
AAACTTTATTTCAGTTAAT--------ATTGTCAATAATA---------------TTTTAA------TAGCTCAATCTTAAGGAAATATATTTAATAAATGTGGTATTTAATATTTTTAAATTTAAATCCAACATTATTCGTATTAATATCTATGTTT-----------------------------------AAAGTATTATATTGAAAGTGCT-----------------------------------------------CAATGTTCAA-----------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAT--------ATTAATCATATATACGTTACAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACTTTAAATTTATTTTTGTCACTTTAATTATCATTCATATTTAATTTAAA---------------------------------------------------------------------------------------------------------------G---------------------------------T--TGTAGTC---------------GATTCCG----------------------------A------------------------------------------------TTTAAGGTTCGCATTT-TTATSizeHit CountTotal NormTotal
No Reads
droRho1
AAATATTAATTTATTTATTGT---TAA----------A------TATT---------------------------CGTTAAT-------------------------TTATTAA----------------------------------------TACA-AAATCTAAATACTG----------------------------------------------------------CAGCAGAAATAATAATAATAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAA---------------------------------------------CCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATATTTAGTTTAGTTTTCTTACATTTACCGGCAAACAAAAATAATTTAAAAATTCGA--------------------TGCTATTTTT--------------------------------------T-----------------------------------------------------------------CTACCGC-------CAC-----------------TG----------------------------TATTT----TC---------------------------------ATGGGATTTTTATACCCTTGC-AGAGSizeHit CountTotal NormTotal
No Reads
droBia1
AATAACCATATAAGTCATGGAAAACGG----------A------TATAAAAAAACTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCATAATGGGCAAATAAGTAT------ACACAATTCTAAGCATATTCTTCTTATTCATTATGTTCATAATA----ATA-----AAGGTCAGGTATTTCCGCATAGAAATGGTTAACTTAAAA-------------GTCATATTTCAGTATTAGAGACTTCAAACGTTGTGATCAGAAAATAAGGAATATTGTATAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAT-----------------------T--------------------------------------TTTAAAATTTTTATAT-TTATSizeHit CountTotal NormTotal
No Reads
droTak1
GTAACCGGAGACGGGCACT--------GTGGTAAAAGGGTTGCA------AAAAAATTGAA------AA------------------------ATGGAAGTACCTAATC----------------------------------TA-AGAATTA-TTTAAAATTTAAATAATCTAAGGTCTTGGAAATAACTTTTATTTATTGTATTAAAAATCTGCAATATAAATAAGA--CAGTATATATTAGAATTAGAATTTGAACTGATGGAATTTAA-----------------------------------TA-----AATTATTTTAAATTTAAATAAATCTAGTACCCTTCTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA---------ATTAT----------------------------------------------------------------TTACAAATTTATGT-TTTTSizeHit CountTotal NormTotal
No Reads
droEug1
TAATGAGTTTTTAGAT-------------------------------------AT------TTTAAAGA--C------C---------------------------------------------------AA-CTGAAATGTATTAATAATTGTTACA-AAG----------------------------------TTGTTACATTTCG-----------------------------------------------------------TCAGGTTGAAACTTAAATATAATACGTTGGCAATGATACCA-----TATATATATATATATATATAGATTTGACATTTTTATACCCGTTACTCGTAGAGTAAAAGGGTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGSizeHit CountTotal NormTotal
No Reads
dm3
AATCTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTACCCGTTACTCGTAGAATGAAACGGTACACAAAGTTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-CAAAATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-CA.....................................................................................................................................................................2491.89170000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002001211000000000000000000000000000000000000000000000000000000000000000000100010000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000001200000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-.......................................................................................................................................................................2391.78160000000000000000000000020000000000000000000010000110000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000020000000000300000000000000000000000000000000000000000000000000000000000000000000000000000100000000110000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-C......................................................................................................................................................................2471.57110000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000100100002110000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-CA.....................................................................................................................................................................2571.2990000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000050000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-C......................................................................................................................................................................2390.6760000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000020000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-CAAAA..................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-CA.....................................................................................................................................................................21120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAA.........................................................................................................................................................................21130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-CAT....................................................................................................................................................................26100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-.......................................................................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-.......................................................................................................................................................................22110.0910000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------...............................................................................................................................................................................18150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CAAG-A......................................................................................................................................................................24170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------AA-CA..........................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATACCCGTTACTCGTAGAGTAAAATGGTATACTAAATTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAC-AGGCTGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------GGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................TGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAC-AGGCTGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------GGA.2617.00700000013012000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAC-AGGCTGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------GGA.2415.00500000020201000000
....................................................................................................................................................................................................................................................................................................................................................................................TGGTATACTAAATTCGTTGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.50300000003000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAC-AGG........................................................................................................................................................................2241.25500010400000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAC-AGGC.......................................................................................................................................................................2441.25500000010310000000
....................................................................................................................................................................................................................................................................................................................................................................................TGGTATACTAAATTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................2621.00200000011000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAC-AGGCTGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------GGA.1811.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAC-AGGCTGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------....2811.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................TCGTAGAGTAAAATGGTATACTAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................TCGTAGAGTAAAATGGTATACTAAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAC-AG.........................................................................................................................................................................2141.00400000400000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---T------------------------------------------------AAC-AGGCTGA....................................................................................................................................................................2611.00100000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................TCGTAGAGTAAAATGGTATACTAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
..T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATACCCGTTACTCGTAGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15300000003000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GGTATACTAAATTCGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18180.11200000000002000000
..T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATACCCGTTACTCGTAGAGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................TTTATACCCGTTACTCGTAGAGTAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................TCGTAGAGTAAAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
CCTATGAATTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTATATAAAGAATTCGATATTGTTAATATTATTATGAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATTTCGTGTT------------------------------------------------------------------------------------------------------------------------------CACCTCAGCATCCTTAGTCATGTATTAGCAAGTGATTTCA----------------------------ATTTC------------------------------------------------ATGTTGGTA----GTTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GGTGGAAATCAA--------------------------------------AAAAAATCGAT------TT--TTAAGGGCAGG----------------------CAATCGA------------------------------TATAAATTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAAAGCGTTTACCCTT---------------------TTCATTGAAT----------------------------------------------------------------------------------------------------------------------------------------------ATAGTTAGTTTTAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTACACAAA-GGGTAAGG---------------------------------------------------------------------------------------------GTGGAAATCGAAAAAAAAATCGA------------------TTTTTAA---------------------------------------------G--GGTAGGC---------------------AATCGATACAAATTAT----------------------------------------------------------------TTTTAAAG-------CGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTACACAAA-GGGTAAGG---------------------------------------------------------------------------------------------GT.............................................................................................................................................................................................................................27200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGAAT----------------------------------------------------------------------------------------------------------------------------------------------ATAGTTAGTTTTAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................22200.05100010000000
droEre2
TCAATAAAAATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTTTATACCCGTTACTCGTAGAGTGAAAGGGTATACTAGATTCGTTGAATAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---T------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................GGTATACTAGATTCGTTGAATAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................2580.1310000010
........................................................................................................................................................................................................................................................................................................................................................................................ATACTAGATTCGTTGAATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19190.0510000010

Generated: 05/18/2015 at 09:20 AM