ID:

dwi_4060

 Coordinate:

scf2_1100000004967:2382596-2382746 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.2 -10.0 -9.9

Flybase annnotation

CDS [Dwil\GK18602-cds]; exon [dwil_GLEANR_19156:2]; intron [Dwil\GK18602-in]

No Repeatable elements found

mature
  1. scf2_1100000004568:20006-20031 -
  2. scf2_1100000004621:2677-2702 -
  3. scf2_1100000004930:266627-266652 -
  4. scf2_1100000004953:1207018-1207043 +
  5. scf2_1100000004958:2679988-2680013 -
  6. scf2_1100000004961:4901260-4901285 +
  7. scf2_1100000004965:603250-603275 +
  8. dwi_4060  scf2_1100000004967:2382689-2382714 +
  9. scf2_1100000000233:420-445 +
star
  1. scf2_1100000005447:412-430 +
  2. scf2_1100000013302:78-96 +
  3. scf2_1100000003501:73-91 +
  4. scf2_1100000004511:8665826-8665844 +
  5. scf2_1100000004515:1259825-1259843 +
  6. scf2_1100000004515:2238048-2238066 +
  7. scf2_1100000004515:2529031-2529049 +
  8. scf2_1100000004516:243697-243715 +
  9. scf2_1100000004540:1825753-1825771 +
  10. scf2_1100000004768:2288519-2288537 +
  11. scf2_1100000004822:2765526-2765544 +
  12. scf2_1100000004851:399899-399917 +
  13. scf2_1100000004943:6383482-6383500 +
  14. dwi_3336  scf2_1100000004943:7263210-7263228 +
  15. scf2_1100000004909:2094262-2094280 +
  16. scf2_1100000004909:7029548-7029566 +
  17. scf2_1100000004921:667247-667265 +
  18. scf2_1100000004921:1203951-1203969 +
  19. scf2_1100000004967:712690-712708 +
  20. dwi_4060  scf2_1100000004967:2382634-2382652 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCGAATGCTAATATGAGGTTTCATGCGTGTCAATGTCATCATCAAGAGACACTCAAAGTTTATCATTCGGCGAGTAAACAACCAAATAAAAAAAAAAAAAAGAAAACCAATATGAACGCATTTAATGCAAATAATGGCCAGGATGAAGGCGTAGATCGACGAGGTGCGGCACCGCGGGCCAACATGGAACGCGGTGACTAGCACGGGTCCGATGAGGAGTCCGACGACGATGTGCCGGACTTAGCAAATCC
****************************************************************************************............................(((((((.............(((........)))...........))))))).********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
 M020
head
.....................................................................................................................................ATGGCCAGGCTGAAGGTG.................................................................................................... 18 2 20 9.20 184 183 0 0 0 1
.....................................................................................................................................ATGGCCAGGTTGAAGGTG.................................................................................................... 18 2 20 1.50 30 30 0 0 0 0
.....................................................................................................................................ATGGCCAGGTTGAAGGTGT................................................................................................... 19 2 15 1.47 22 5 0 17 0 0
.......................................................GAGTTTATCATTCGGCGGG................................................................................................................................................................................. 19 2 1 1.00 1 0 0 0 1 0
........TAATATGAGGTTTCATGCGTGTCAAT......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................AACGCGGTGACTAGCACGGGTCCGA....................................... 25 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................CCGACGACGATGTGCCGGACTTAG....... 24 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................CCGACGACGATGTGCCGGACTTAGCAAA... 28 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................TGAAGGCGTAGATCGACGAGGTGCGG.................................................................................. 26 0 9 1.00 9 2 7 0 0 0
......................................................................................................................................TGGCCAGGTTGAAGGTGT................................................................................................... 18 2 20 1.00 20 0 0 20 0 0
..............................................................................................................................................................ACGAGGTGCGGCACCGCGGGC........................................................................ 21 0 20 0.40 8 6 1 1 0 0
..................................................................................................................................................................................................................................ACGATGTGGCGGACTTATCT..... 20 3 3 0.33 1 0 0 0 1 0
..............................................................................................................................................................ACGAGGTGCGGCACCGCGGG......................................................................... 20 0 20 0.30 6 5 1 0 0 0
..............................................................................................................................................................ACGAGGTGCGGCACCGCGGGCC....................................................................... 22 0 20 0.30 6 6 0 0 0 0
.......................................................................................................................................................TAGATCGACGAGGTGCGGCACCGCG........................................................................... 25 0 11 0.27 3 3 0 0 0 0
............................................................................................................................................GGATGAAGGCGTAGATCGACGAGGT...................................................................................... 25 0 8 0.25 2 0 2 0 0 0
...............................................................................................................................................TGAAGGCGTAGATCGACGAGGTGCGT.................................................................................. 26 1 9 0.22 2 0 2 0 0 0
........................................................................................................................................GCCAGGATGAAGGCGTAGATCGACG.......................................................................................... 25 0 9 0.22 2 1 1 0 0 0
...............................................................................................................................................TGAAGGCGTAGATCGACGAGGTGC.................................................................................... 24 0 9 0.22 2 0 2 0 0 0
.......................................................................................................................................................TAGATCGACGAGGTGCGGCACCGCGG.......................................................................... 26 0 10 0.20 2 2 0 0 0 0
................................................................................................................................................GAAGGCGTAGATCGACGAGGTGCGG.................................................................................. 25 0 10 0.20 2 2 0 0 0 0
...............................................................................................................................................TGAAGGCGTAGATCGACGAGGT...................................................................................... 22 0 10 0.20 2 0 2 0 0 0
...............................................................................................................................................TGAAGGCGTAGATCGACGAGGTG..................................................................................... 23 0 10 0.20 2 0 2 0 0 0
.......................................................................................................................................................TAGATCGACGAGGTGCGGCACCGCGGG......................................................................... 27 0 10 0.20 2 2 0 0 0 0
...........................................................................................................................................................TCGACGAGGTGCGGCACCGCGGG......................................................................... 23 0 20 0.20 4 4 0 0 0 0
...........................................................................................................................................................TCGACGAGGTGCGGCACCGCGGGC........................................................................ 24 0 20 0.20 4 0 4 0 0 0
................................................................................................................................................................GAGGTGCGGCACCGCGGGCCAAC.................................................................... 23 0 6 0.17 1 1 0 0 0 0
...........................................................................................................................................................TCGACGAGGTGCGGCACCGCGGGCCAAC.................................................................... 28 0 6 0.17 1 1 0 0 0 0
..............................................................................................................................................................ACGAGGTGCGGCACCGCGGGCCAACA................................................................... 26 0 6 0.17 1 1 0 0 0 0
.................................................................................................................................................................AGGTGCGGCACCGCGGGCCAACATG................................................................. 25 0 6 0.17 1 1 0 0 0 0
......................................................................................................................................................................CGGCACCGCGGGCCAACATGGAACG............................................................ 25 0 6 0.17 1 0 1 0 0 0
....................................................................................................................................................................................................................TGAGGAGTCCGACGACGATGTGC................ 23 0 13 0.15 2 1 1 0 0 0
.................................................................................................................................................AAGGCGTAGATCGACGAGGTG..................................................................................... 21 0 13 0.15 2 1 1 0 0 0
................................................................................................................................................................................................................CCGATGAGGAGTCCGACGACGATG................... 24 0 20 0.15 3 3 0 0 0 0
...................................................................................................................................TAATGGCCAGGATGAAGGCGTAG................................................................................................. 23 0 7 0.14 1 0 1 0 0 0
...................................................................................................................................TAATGGCCAGGATGAAGG...................................................................................................... 18 0 7 0.14 1 1 0 0 0 0
...........................................................................................................................................AGGATGAAGGCGTAGATCGACGAGGT...................................................................................... 26 0 8 0.13 1 0 1 0 0 0
...........................................................................................................................................AGGATGAAGGCGTAGATCGACGAGG....................................................................................... 25 0 8 0.13 1 0 1 0 0 0
.........................................................................................................................................CCAGGATGAAGGCGTAGATCGACGAGG....................................................................................... 27 0 8 0.13 1 1 0 0 0 0
......................................................................................................................................TGGCCAGGATGAAGGCGTAGATCGACG.......................................................................................... 27 0 9 0.11 1 1 0 0 0 0
...............................................................................................................................................TGAAGGCGTAGATCGACTAGGTGCGG.................................................................................. 26 1 9 0.11 1 1 0 0 0 0
..............................................................................................................................................................ACGAGGTGCGGCACCGCGGGCCAA..................................................................... 24 0 20 0.10 2 2 0 0 0 0
............................................................................................................................................................CGACGAGGTGCGGCACCGCGGGC........................................................................ 23 0 20 0.10 2 2 0 0 0 0
.....................................................................................................................................................CGTAGATCGACGAGGTGCGGC................................................................................. 21 0 10 0.10 1 0 0 1 0 0
.....................................................................................................................................................CGTAGATCGACGAGGTGCGG.................................................................................. 20 0 10 0.10 1 1 0 0 0 0
..........................................................................................................................................................ATCGACGAGGTGCGGCACCGCGGGCCT...................................................................... 27 1 10 0.10 1 1 0 0 0 0
..............................................................................................................................................................ACGAGGTGCGGCACCGCGGGCCA...................................................................... 23 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................................................CCGATGAGGAGTCCGACGACGAT.................... 23 0 20 0.10 2 2 0 0 0 0
..............................................................................................................................................................................................................GTCCGATGAGGAGTCCGACGACG...................... 23 0 20 0.10 2 2 0 0 0 0
..............................................................................................................................................................................................................GTCCGATGAGGAGTCCGACGACGATG................... 26 0 20 0.10 2 2 0 0 0 0
......................................................................................................................................................................................................................AGGAGTCCGACGACGATGTG................. 20 0 20 0.10 2 1 1 0 0 0
...........................................................................................................................................................TCGACGAGGTGCGGCACCGCGGGCC....................................................................... 25 0 20 0.10 2 2 0 0 0 0
......................................................................................................................................................................................................................AGGAGTCCGACGACGATGTGCCG.............. 23 0 20 0.10 2 2 0 0 0 0
.................................................................................................................................................AAGGCGTAGATCGACGAGGTGCGGC................................................................................. 25 0 10 0.10 1 0 1 0 0 0
...............................................................................................................................................TGAAGGCGTAGATTGACGAGGTG..................................................................................... 23 1 11 0.09 1 0 1 0 0 0
.......................................................................................................................................................TAGATCGACGAGGTGCGGCACCGC............................................................................ 24 0 11 0.09 1 1 0 0 0 0
........................................................................................................................................................AGATCGACGAGGTGCGGCACCG............................................................................. 22 0 11 0.09 1 1 0 0 0 0
................................................................................................................................................GAAGGCGTAGATCGACGAGGT...................................................................................... 21 0 11 0.09 1 0 0 0 0 1
...............................................................................................................................................TGAAGGCGTAGATCGACGAGGGGC.................................................................................... 24 1 11 0.09 1 1 0 0 0 0
.........................................................................................................................................................GACGGACGAGGTGCTGCACC.............................................................................. 20 3 12 0.08 1 0 0 1 0 0
......................................................................................................................................TGGCCAGGATGAAGGCGTAGATCG............................................................................................. 24 0 12 0.08 1 0 1 0 0 0
....................................................................................................................................................................................................................TGAGGAGTCCGACGACGATGTGCCGG............. 26 0 12 0.08 1 1 0 0 0 0
.................................................................................................................................................AAGGCGTATATCGACGAGGTG..................................................................................... 21 1 13 0.08 1 0 1 0 0 0
....................................................................................................................................................................................................................TGAGGAGTCCGACGACGATGTGCC............... 24 0 13 0.08 1 0 1 0 0 0
.................................................................................................................................................................................................................CGATGAGGAGTACGACGACGATGTGC................ 26 1 13 0.08 1 1 0 0 0 0
................................................................................................................................................................................................................CCGATGAGGAGTCCGACGACGATGT.................. 25 0 13 0.08 1 1 0 0 0 0
....................................................................................................................................................................................................................TGAGCAGTCCGACGACGATGTGCCG.............. 25 1 13 0.08 1 0 1 0 0 0
................................................................................................................................................................................................................CCGATGAGGAGTCCGACGACGATGTGC................ 27 0 13 0.08 1 0 1 0 0 0
.........................................TCAAGAGACACTCAAAGTTTAT............................................................................................................................................................................................ 22 0 13 0.08 1 0 1 0 0 0
.................................................................................................................................................................................................................CGATGAGGAGTCCGACGACGATGT.................. 24 0 13 0.08 1 1 0 0 0 0
.......................................................................................................................................................................GTCATCGCGGGTCAACATG................................................................. 19 3 14 0.07 1 1 0 0 0 0
.....................................................................................................................................ATGGCCAGGATGAAGGTG.................................................................................................... 18 1 14 0.07 1 1 0 0 0 0
.....................................................................................................................................ATGGCCAGGATGAAGGTGCGG................................................................................................. 21 3 15 0.07 1 0 0 1 0 0
.....................................................................................................................................ATGGCCAGGCTGAAGGTGT................................................................................................... 19 2 16 0.06 1 1 0 0 0 0
.....................................................................................................................................ATGGCCAGGTTGAAGGCG.................................................................................................... 18 1 16 0.06 1 1 0 0 0 0
....................................................................................................................................AATGGCCAGGCTGAAGGT..................................................................................................... 18 2 18 0.06 1 0 0 0 1 0
......................................................................................................................................................................................................................AGGAGTCCGACGACGATGTGCC............... 22 0 20 0.05 1 0 0 1 0 0
.......................................................................................................................................................................................................................GGAGTCCGACGACGATGTGCC............... 21 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................TCCGATGAGGAGTCCGACGACGA..................... 23 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................CGAGGTGCGGCACCGCGGGCCA...................................................................... 22 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................................GGAGTCCGACGACGATGTGC................ 20 0 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................................................GATGAGGAGTCCGACGACGATG................... 22 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................................GAGTCCGACGACGATGTGCCGG............. 22 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................GGTCCGATGAGGAGTCCGACGACGA..................... 25 0 20 0.05 1 1 0 0 0 0
........................................................................................AAAAAAAAAAAAAGAAAAC................................................................................................................................................ 19 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................................................TCCAATGACGAGTCCGAC.......................... 18 2 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................................CCGACGACGATGTGCCGGAC........... 20 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................................GAGTCCGACGACGATGTGCCG.............. 21 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................................................GGTCCGATGAGGAGTCCG............................ 18 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................ACGAGGTGCGGCACCGCGA.......................................................................... 19 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................ATGGCCAGGTTGAAGGTGTGG................................................................................................. 21 3 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................GGTCCGATGAGGAGTCCGACGACG...................... 24 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................TCTACGACGTGCGGAACC.............................................................................. 18 3 20 0.05 1 0 0 0 0 1
.............................................................................................................................................................................................................GGTCCGATGAGGAGTCCGACGACGAT.................... 26 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................................AGGAGTCCGACGACGATGTGCCGG............. 24 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................ACGAGGTGCGGCACCGCG........................................................................... 18 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................ACGAGGTGCGGCACCGCGG.......................................................................... 19 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................................................AGGAGTCCGACGACGATG................... 18 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................CGACGAGGTGCGGCACCGCGGGCCA...................................................................... 25 0 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

GGCTTACGATTATACTCCAAAGTACGCACAGTTACAGTAGTAGTTCTCTGTGAGTTTCAAATAGTAAGCCGCTCATTTGTTGGTTTATTTTTTTTTTTTTTCTTTTGGTTATACTTGCGTAAATTACGTTTATTACCGGTCCTACTTCCGCATCTAGCTGCTCCACGCCGTGGCGCCCGGTTGTACCTTGCGCCACTGATCGTGCCCAGGCTACTCCTCAGGCTGCTGCTACACGGCCTGAATCGTTTAGG
**********************************************************************************............................(((((((.............(((........)))...........))))))).**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body		 V119
head
..................................................................................................................................................TCCGCATCTAGCTGCTCCACGCCGT................................................................................ 25 0 10 12.90 129 91 33 5 0 0
........................................TAGTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 25 0 13 10.08 131 30 98 0 3 0
............................................................................................................................................CCTACTTCCGCATCTAGCTGCTCCACGC................................................................................... 28 0 8 8.38 67 51 16 0 0 0
............................................................................................................................................................................................................CCCAGGCTACTCCTCAGGCTGCTGCT..................... 26 0 11 6.18 68 65 3 0 0 0
.................................................................................................................................................TTCCGCATCTAGCTGCTCCACGCCGT................................................................................ 26 0 10 6.00 60 53 7 0 0 0
...............................................................................................................................................ACTTCCGCATCTAGCTGCTCCACGC................................................................................... 25 0 9 5.67 51 42 9 0 0 0
.....................................................................................................................................TACCGGTCCTACTTCCGCATCTAGCT............................................................................................ 26 0 9 3.89 35 26 9 0 0 0
...........................................................................................................................................................................................................GCCCAGGCTACTCCTCAGGCTGCTGCT..................... 27 0 11 2.91 32 30 2 0 0 0
.........................................................................................................................................GGTCCTACTTCCGCATCTAGCTGCT......................................................................................... 25 0 9 2.89 26 11 15 0 0 0
..................................................................................................................................................................CCACGCCGTGGCGCCCGGTTGTACCT............................................................... 26 0 6 2.83 17 15 2 0 0 0
..............................................................................................................................................TACTTCCGCATCTAGCTGCTCCACGC................................................................................... 26 0 9 1.78 16 13 3 0 0 0
.............................................................................................................................................CTACTTCCGCATCTAGCTGCTCCACGC................................................................................... 27 0 9 1.67 15 12 2 0 0 1
............................................................................................................................................CCTACTTCCGCATCTAGCTGCTCCAC..................................................................................... 26 0 8 1.38 11 6 5 0 0 0
.............................................................................................................................................................................TTCCCGGTTGTACCTTGCGCCACTGAT................................................... 27 2 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................GCCCAGGCTACTCCTCAGGCTGCTGC...................... 26 0 11 1.00 11 11 0 0 0 0
...................................................................................................................................................CCGCATCTAGCTGCTCCACGCCGT................................................................................ 24 0 10 1.00 10 6 4 0 0 0
..........TATACTCCAAAGTACGCACAGTTACAGT..................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
...............................TTACAGTAGTAGTTCTCTGTGAGT.................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................................CTGCTGCTACACGGCCTGAATCGTT.... 25 0 1 1.00 1 1 0 0 0 0
......................................AGTAGTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
...................................AGTAGTAGTTCTCTGTGAGTTTCAAAT............................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
.......................ACGCACAGTTACAGTAGTAGTTCTCT.......................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
............................................TCTCTGTGAGTTTCAAATAGTAAGCCGCT.................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
...................................................GAGTTTCAAATAGTAAGCCGCTCATT.............................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
......................TACGCACAGTTACAGTAGTAGTTCTC........................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.......................ACGCACAGTTACAGTAGTAGTTC............................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................GGTTGTACCTTGCGCCACTGATCGT................................................ 25 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................CGGTTGTACCTTGCGCCACTGATCGT................................................ 26 0 1 1.00 1 1 0 0 0 0
.......................................GTAGTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................CGGTCCTACTTCCGCATCTAGCTGC.......................................................................................... 25 0 9 0.78 7 5 2 0 0 0
...............................................................................................................................................ACTTCCGCATCTAGCTGCTCCACG.................................................................................... 24 0 9 0.78 7 6 1 0 0 0
.....................................................................................................................................TACCGGTCCTACTTCCGCATCTAGCTGCT......................................................................................... 29 0 9 0.78 7 6 1 0 0 0
............................................................................................................................................CCTACTTCCGCATCTAGCTGCTCCACG.................................................................................... 27 0 8 0.75 6 5 1 0 0 0
..........................................................................................................................................................................................................AGCCCAGGCTACTCCTCAGGCTGCTGCT..................... 28 1 11 0.73 8 4 3 1 0 0
................................................................................................................................................CTTCCGCATCTAGCTGCTCCACGCCGT................................................................................ 27 0 10 0.70 7 4 3 0 0 0
..........................................GTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 23 0 13 0.69 9 9 0 0 0 0
.........................................AGTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 24 0 13 0.69 9 4 5 0 0 0
..............................................................................................................................................................................GCCCGGTTGTACCTTGCGCCACT...................................................... 23 0 6 0.67 4 1 3 0 0 0
...........................................................................................................................................................................................................CCCCAGGCTACTCCTCAGGCTGCTGCT..................... 27 1 11 0.64 7 7 0 0 0 0
..................................................................................................................................................TCCGCATCTAGCTGCTCCACGCCG................................................................................. 24 0 10 0.60 6 6 0 0 0 0
.........................................................................................................................................GGTCCTACTTCCGCATCTAGCTGC.......................................................................................... 24 0 9 0.56 5 5 0 0 0 0
...................................................................................................................................................................CACGCCGTGGCGCCCGGTTGTACCT............................................................... 25 0 6 0.50 3 3 0 0 0 0
......................................................................................................................................................................GCCGTGGCGCCCGGTTGTACCT............................................................... 22 0 6 0.50 3 3 0 0 0 0
...........................................................................................................................................................................................................GCCCAGGCTACTCCTCAGGCTGCT........................ 24 0 11 0.45 5 5 0 0 0 0
................................................................................................................................................................................................................GGCTACTCCTCAGGCTGCTGCT..................... 22 0 20 0.45 9 0 9 0 0 0
........................................................................................................................................CGGTCCTACTTCCGCATCTAGCTGCT......................................................................................... 26 0 9 0.44 4 4 0 0 0 0
...............................................................................................................................................ACTTCCGCATCTAGCTGCTCCACGCCGT................................................................................ 28 0 9 0.44 4 3 1 0 0 0
.......................................................................................................................................CCGGTCCTACTTCCGCATCTAGCTGCT......................................................................................... 27 0 9 0.44 4 3 1 0 0 0
..................................................................................................................................................TCCGCATCTAGCTGCTCCACGC................................................................................... 22 0 10 0.40 4 3 1 0 0 0
.............................................................................................................................................................................................................CCAGGCTACTCCTGAGGCTGCTGCT..................... 25 1 20 0.40 8 8 0 0 0 0
............................................................................................................................................CCTACTTCCGCATCTAGCTGCTCCA...................................................................................... 25 0 8 0.38 3 3 0 0 0 0
..........................................................................................................................................................................................................TGCCCAGGCTACTCCTCAGGCTGCTGC...................... 27 0 11 0.36 4 4 0 0 0 0
.......................................................................................................................................CCGGTCCTACTTCCGCATCTAGCTGC.......................................................................................... 26 0 9 0.33 3 3 0 0 0 0
.....................................................................................................................................TACCGGTCCTACTTCCGCATCTAGCTGC.......................................................................................... 28 0 9 0.33 3 1 2 0 0 0
.................................................................................................................................................................TCCACGCCGTGGCGCCCGGTTGTACCT............................................................... 27 0 6 0.33 2 2 0 0 0 0
....................................................................................................................................TTACCGGTCCTACTTCCGCATCTAGCT............................................................................................ 27 0 9 0.33 3 3 0 0 0 0
......................................................................................................................................ACCGGTCCTACTTCCGCATCTAGCT............................................................................................ 25 0 12 0.33 4 4 0 0 0 0
..............................................................................................................................................................TGCTCCACGCCGTGGCGCCCGGTTGT................................................................... 26 0 6 0.33 2 2 0 0 0 0
................................................................................................................................................................................................................GGCTACTCCTCAGGCTGCTGCTACA.................. 25 0 13 0.31 4 4 0 0 0 0
................................................................................................................................................CTTCCGCATCTAGCTGCTCCACGC................................................................................... 24 0 10 0.30 3 1 2 0 0 0
......................................................................................................................................................CATCTAGCTGCTCCACGCCGTGGCGC........................................................................... 26 0 10 0.30 3 2 1 0 0 0
.................................................................................................................................................TTCCGCATCTAGCTGCTCCACGCCG................................................................................. 25 0 10 0.30 3 3 0 0 0 0
..........................................................................................................................................................................................................ACCCCAGGCTACTCCTCAGGCTGCTGCT..................... 28 2 11 0.27 3 3 0 0 0 0
.........................................................................................................................................GGTCCTACTTCCGCATCTAGCTGCTCCA...................................................................................... 28 0 8 0.25 2 1 1 0 0 0
.................................................................................................................................TTATTACCGGTCCTACTTCCGCAT.................................................................................................. 24 0 4 0.25 1 1 0 0 0 0
......................................................................................................................................ACCGGTCCTACTTCCGCATCTAGCTGCT......................................................................................... 28 0 9 0.22 2 1 1 0 0 0
..........................................................................................................................................GTCCTACTTCCGCATCTAGCTGCT......................................................................................... 24 0 9 0.22 2 1 1 0 0 0
......................................................................................................................................TCCGGTCCTACTTCCGCATCTAGCTGCT......................................................................................... 28 1 9 0.22 2 1 1 0 0 0
...............................................................................................................................................ACTTCCGCATCTAGCTGCTCCACGCC.................................................................................. 26 0 9 0.22 2 2 0 0 0 0
.....................................................................................................................................................GCATCTAGCTGCTCCACGCCGTGGCGC........................................................................... 27 0 10 0.20 2 2 0 0 0 0
...................................................................................................................................................CCGCATCTAGCTGCTCCACGCCGTGGCGC........................................................................... 29 0 10 0.20 2 1 1 0 0 0
................................................................................................................................................TTTCCGCATCTAGCTGCTCCACGCCGT................................................................................ 27 1 10 0.20 2 1 1 0 0 0
................................................................................................................................................................................................................GGCTACTCCTCAGGCTGCTGC...................... 21 0 20 0.20 4 4 0 0 0 0
..................................................................................................................................................TCCGCATCTAGCTGCTCCACGCCGTG............................................................................... 26 0 10 0.20 2 1 1 0 0 0
...................................................................................................................................................CCGCATCTAGCTGCTCCACGCCGTGGC............................................................................. 27 0 10 0.20 2 1 1 0 0 0
..........................................................................................................................................................................................................ACCCCAGGCTACTCCTCAGGCTGCTGC...................... 27 2 11 0.18 2 2 0 0 0 0
..........................................................................................................................................................................................................TGCCCAGGCTACTCCTCAGGCTGCTGCT..................... 28 0 11 0.18 2 2 0 0 0 0
...........................................................................................................................................................................................................TCCCAGGCTACTCCTCAGGCTGCTGCT..................... 27 1 11 0.18 2 2 0 0 0 0
............................................................................................................................................................................................................CCCAGGCTACTCCTCAGGCTGCTGC...................... 25 0 11 0.18 2 2 0 0 0 0
.................................................................................................TTTTCTTTTGGTTATACTTGCGT................................................................................................................................... 23 0 6 0.17 1 0 1 0 0 0
.....................................................................................................................................................................CGCCGTGGCGCCCGGTTGTACCT............................................................... 23 0 6 0.17 1 0 1 0 0 0
...........................................................................................................................................................................GGCGCCCGGTTGTACCTTGCGCCACT...................................................... 26 0 6 0.17 1 1 0 0 0 0
..............................................................................................................................................................AGCTCCACGCCGTGGCGCCCGGTTGT................................................................... 26 1 6 0.17 1 1 0 0 0 0
.........................................................................................................................................GGTCCTACTTCCGCATCTAGCT............................................................................................ 22 0 12 0.17 2 2 0 0 0 0
................................................................................................................................................................CTCCACGCCGTGGCGCCCGGTTGTACC................................................................ 27 0 6 0.17 1 1 0 0 0 0
........................................................................................................................................................................TGTGGCGCCCGGTTGTACCTTGCGC.......................................................... 25 1 6 0.17 1 1 0 0 0 0
..................................................................................................................................................................CCACGCCGTGGCGCCCGGTTGTACC................................................................ 25 0 6 0.17 1 1 0 0 0 0
.......................................................................................................................................................................CCGTGGCGCCCGGTTGTACCTTGC............................................................ 24 0 6 0.17 1 1 0 0 0 0
........................................................................................................................................................................CGTGGCGCCCGGTAGGAC................................................................. 18 2 6 0.17 1 1 0 0 0 0
..................................................................................................................................................................CCACGCCGTGGCGCCCGGTTGTACCTT.............................................................. 27 0 6 0.17 1 1 0 0 0 0
........................................................................................................................................................................CGTGGCGCCCGGTTGTACCTTGC............................................................ 23 0 6 0.17 1 1 0 0 0 0
.............................................................................................................................................................AAGCTCCACGCCGTGGCGCCCGGTTGT................................................................... 27 2 6 0.17 1 1 0 0 0 0
.............................................................................................................................................................................CGCCCGGTTGTACCTTGCGCCAC....................................................... 23 0 6 0.17 1 1 0 0 0 0
........................................................................................................................................................................CGTGGCGCCCGGTTGTACCT............................................................... 20 0 6 0.17 1 1 0 0 0 0
..............................................................................................................................................................................GCCCGGTTGTACCTTGCGCCACTG..................................................... 24 0 6 0.17 1 0 1 0 0 0
...............................................................................................................................................................GCTCCACGCCGTGGCGCCCGGTTGT................................................................... 25 0 6 0.17 1 1 0 0 0 0
..................................................................................................................................................................CCACGCCGTGGCGGCCGGTTGTACC................................................................ 25 1 6 0.17 1 1 0 0 0 0
..................................................................................................................................................................................GGTTGTACCTTGCGCCACT...................................................... 19 0 6 0.17 1 1 0 0 0 0
..............................................................................................................................................................................................................CAGGCTACTCCTCAGGCTGCTGCTACAC................. 28 0 13 0.15 2 1 1 0 0 0
.................................................................................................................................................................................................................GCTACTCCTCAGGCTGCTGCTACA.................. 24 0 13 0.15 2 2 0 0 0 0
.................................................................................................................................................................................................................GCTACTCCTCAGGCTGCTGCTACAC................. 25 0 13 0.15 2 1 1 0 0 0
........................................TAGTTCTCTGTGAGTTTCAAATAG........................................................................................................................................................................................... 24 0 13 0.15 2 1 1 0 0 0
..............................................................................................................................................................................................................CAGGCTACTCCTCAGGCTGCTGCTACA.................. 27 0 13 0.15 2 2 0 0 0 0
.......................................ATAGTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 26 1 13 0.15 2 1 1 0 0 0
................................................................................................................................................................................................................GGCTACTCCTCAGGCTGCTGCTACAC................. 26 0 13 0.15 2 0 2 0 0 0
..............................................................................................................................................................................................................CAGGCTACTCCTGAGGCTGCTGCT..................... 24 1 20 0.15 3 3 0 0 0 0
..............................................................................................................................................................................................................CAGGCTACTCCTCAGGCTGCTGCT..................... 24 0 20 0.15 3 0 0 0 3 0
.........................................AGTTCTCTGTGAGTTTCAAAT............................................................................................................................................................................................. 21 0 14 0.14 2 0 2 0 0 0
...................................................................................................................................................................AACGCCGTGGCGCCCGGTTGTACCT............................................................... 25 1 7 0.14 1 1 0 0 0 0
..................................................................................................................................................................TCACGCCGTGGCGCCCGGTTGTACCT............................................................... 26 1 7 0.14 1 1 0 0 0 0
.........................................................................................................................................GGTCCTACTTCCGCATCTAGCTGCTC........................................................................................ 26 0 8 0.13 1 1 0 0 0 0
............................................................................................................................................CCTACTTCCGCATCTAGCTGCTCC....................................................................................... 24 0 8 0.13 1 0 1 0 0 0
.........................................................................................................................................GGTCCTACTTCCGCATCTAGCTGCTCC....................................................................................... 27 0 8 0.13 1 1 0 0 0 0
...........................................................................................................................................TCCTACTTCCGCATCTAGCTGCTCC....................................................................................... 25 0 8 0.13 1 0 1 0 0 0
...........................................................................................................................................TCCTACTTCCTCATCTAGCTGCTCCACGC................................................................................... 29 1 8 0.13 1 0 1 0 0 0
............................................................................................................................................CCTACTTCCGCATCTAGCTGCTCCACGCC.................................................................................. 29 0 8 0.13 1 1 0 0 0 0
...........................................................................................................................................TCCTACTTCCGCATCTAGCTGCTCCACGC................................................................................... 29 0 8 0.13 1 1 0 0 0 0
............................................................................................................................................CCCACTTCCGCATCTAGCTGCTCCA...................................................................................... 25 1 8 0.13 1 0 1 0 0 0
......................................................................................................................................................CATCTAGCTGCTCCACGCCGTGGCGCC.......................................................................... 27 0 9 0.11 1 1 0 0 0 0
...............................................................................................................................................ACTTCCGCATCTAGCTGCTCCACGCCG................................................................................. 27 0 9 0.11 1 1 0 0 0 0
..............................................................................................................................................TACTTCCGCATCTAGCTGCTCCACG.................................................................................... 25 0 9 0.11 1 1 0 0 0 0
..........................................................................................................................................GTCCTACTTCCGCATCTAGCTGC.......................................................................................... 23 0 9 0.11 1 0 1 0 0 0
...........................ACGGTTACAGTAGTAGTTCTCTGT........................................................................................................................................................................................................ 24 1 9 0.11 1 1 0 0 0 0
..............................................................................................................................................TACTTCCGCATCTAGCTGCTCCACGCCGT................................................................................ 29 0 9 0.11 1 1 0 0 0 0
......................................................................................................................................ACCGGTCCTACTTCCGCATCTAGCTG........................................................................................... 26 0 9 0.11 1 0 1 0 0 0
...............................................................................................................................................ACTTCCGCATCTAGCTGCTCCACGACGT................................................................................ 28 1 9 0.11 1 0 1 0 0 0
.......................................................................................................................................TCGGTCCTACTTCCGCATCTAGCTGC.......................................................................................... 26 1 9 0.11 1 0 1 0 0 0
............................................................................................................................................CCTACTTCCGCATCTAACTGCTCCACGC................................................................................... 28 1 9 0.11 1 1 0 0 0 0
.............................................................................................................................................GTACTTCCGCATCTAGCTGCTCCACGC................................................................................... 27 1 9 0.11 1 0 1 0 0 0
.....................................................................................................................................TACCCGTCCTACTTCCGCATCTAGCT............................................................................................ 26 1 9 0.11 1 0 1 0 0 0
.....................................................................................................................................TACCGGTCCTACTTCCGCATCTAGC............................................................................................. 25 0 9 0.11 1 1 0 0 0 0
........................................................................................................................................CGGTCCTACTTCCGCATCTAGCTG........................................................................................... 24 0 9 0.11 1 1 0 0 0 0
...........................................................................................................................................................AGCTGCTCCACGCCGTGGCGCCCGGTT..................................................................... 27 0 20 0.10 2 2 0 0 0 0
....................................................................................................................................................CGCATCTAGCTGCTCCACGCCGT................................................................................ 23 0 10 0.10 1 1 0 0 0 0
.........................................................................................................................................GGTCCTACTTCCGGATCTAGCTGCT......................................................................................... 25 1 10 0.10 1 1 0 0 0 0
...................................................................................................................................................TCGCATCTAGCTGCTCCACGCCGTGGCGC........................................................................... 29 1 10 0.10 1 0 1 0 0 0
..................................................................................................................................................TTCGCATCTAGCTGCTCCACGCCGT................................................................................ 25 1 10 0.10 1 0 0 0 0 1
.........................................................................................................................................................................................................GTGCCCAGGCTACTCCTCAGGCTGCTGCT..................... 29 0 10 0.10 1 0 0 1 0 0
........................................................................................................................................................AGTAGCTGCTCCACGCCGTGGCGCCCG........................................................................ 27 2 10 0.10 1 1 0 0 0 0
..................................................................................................................................................TCCACATCTAGCTGCTCCACGCCGT................................................................................ 25 1 10 0.10 1 0 1 0 0 0
.............................................................................................................................................................................................................CCAGGCTACTCCTCAGACTGCTGCT..................... 25 1 20 0.10 2 2 0 0 0 0
............................................................................................................................................................................................................TTCAGGCTACTCCTCAGGCTGCTGCT..................... 26 2 20 0.10 2 2 0 0 0 0
..................................................................................................................................................TCCGCATCTAGCTGCTCCACGCCGC................................................................................ 25 1 10 0.10 1 1 0 0 0 0
.....................................................................................................................................................GCATCTAGCTGCTCCACGCCGTGGC............................................................................. 25 0 10 0.10 1 1 0 0 0 0
..............................................................................................................................................................................................................CAGGCTACTCCTCAGACTGCTGCT..................... 24 1 20 0.10 2 2 0 0 0 0
...................................................................................................................................................CCGCATCTAGCTGCTCCACGCCGTC............................................................................... 25 1 10 0.10 1 0 1 0 0 0
....................................................................................................................................................CGCATCTAGCTGCTCCACGCCGTT............................................................................... 24 1 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................................................................................TCAGGCTGCTGCTACACGGCCT............ 22 0 20 0.10 2 0 0 2 0 0
...............................................................................................................................................ACTTCCGCATCTAGCTGCTCCAC..................................................................................... 23 0 10 0.10 1 0 1 0 0 0
.............................................................................................................................................CTACTTCCGCATCTAGCTGCTCCAC..................................................................................... 25 0 10 0.10 1 0 1 0 0 0
.................................................................................................................................................TTCCGCATCTAGCAGCTCCACGCCG................................................................................. 25 1 10 0.10 1 1 0 0 0 0
...................................................................................................................................................CCGCATCTAGCTGCTCCACGC................................................................................... 21 0 10 0.10 1 1 0 0 0 0
......................................................................................................................................................CATCTAGCTGCTCCACGCCGTGGCGT........................................................................... 26 1 10 0.10 1 0 1 0 0 0
.................................................................................................................................................TTCCGCATCTAGCTGCTCCACGC................................................................................... 23 0 10 0.10 1 1 0 0 0 0
................................................................................................................................................CTTCCGCATCTAGCTGCTCCACC.................................................................................... 23 1 10 0.10 1 1 0 0 0 0
...............................................................................................................................................ACTTCCGCATCTAACTGCTCCACGC................................................................................... 25 1 10 0.10 1 0 1 0 0 0
....................................................................................................................................................CGCATCTAGCTGCTCCACGC................................................................................... 20 0 10 0.10 1 1 0 0 0 0
................................................................................................................................................................................................CCACTGTTAGTGACCAGGC........................................ 19 3 10 0.10 1 0 0 1 0 0
.........................................................................................................................................................CTAGCTGCTCCACGCCGTGGCGCCC......................................................................... 25 0 10 0.10 1 1 0 0 0 0
..................................................................................................................................................TCCGCATATAGCTGCTCCACGCCGT................................................................................ 25 1 10 0.10 1 0 1 0 0 0
..................................................................................................................................................TCCGCATCTAGCTGCTCCACGCCGTGG.............................................................................. 27 0 10 0.10 1 1 0 0 0 0
..........................................................................................................................................................TAGCTGCTCCACGCCGTGGCGCCCGGT...................................................................... 27 0 10 0.10 1 1 0 0 0 0
...........................................................................................................................................................................................................TTTCAGGCTACTCCTCAGGCTGCTGCT..................... 27 3 20 0.10 2 2 0 0 0 0
...................................................................................................................................................CCGCATCTAGCTGCTCCACGCC.................................................................................. 22 0 10 0.10 1 0 1 0 0 0
.............................................................................................................................................................CTGCTCCACGCCGTGGCGCCCGGT...................................................................... 24 0 20 0.10 2 2 0 0 0 0
...............................................................................................................................................................................................................TGGCTACTCCTCAGGCTGCTGCTAC................... 25 1 20 0.10 2 1 1 0 0 0
...........................................................................................................................................................................................................GCCCAGGCTACTCCTCAGGCTGC......................... 23 0 11 0.09 1 1 0 0 0 0
.................................................................................................................................................ATCCGCATCTAGCTGCTCCACGC................................................................................... 23 1 11 0.09 1 0 1 0 0 0
............................................................................................................................................................................................................CCCAGGCTACTCCTCAGGCTGCTGCTG.................... 27 1 11 0.09 1 1 0 0 0 0
..........................................................................................................................................................................................................ATCCCAGGCTACTCCTCAGGCTGCTGCT..................... 28 2 11 0.09 1 1 0 0 0 0
.....................................................................................................................................................ATATCTAGCTGCTCCACGCCGTGGCGC........................................................................... 27 2 11 0.09 1 0 1 0 0 0
............................................................................................................................................................................................................CCCAGGCTACTCCTCAGGCTGCTG....................... 24 0 11 0.09 1 1 0 0 0 0
.........................................................................................................................................................CTAGCTGCTCCACGCCGTGGCGC........................................................................... 23 0 11 0.09 1 1 0 0 0 0
...........................................................................................................................................................................................................GCCCAGGCTACTCCTCAGGCTGCTGCTC.................... 28 1 11 0.09 1 1 0 0 0 0
..................................................................................................................................................TCCGCATCTAGCTACTCCACGCCG................................................................................. 24 1 11 0.09 1 1 0 0 0 0
..........................................................................................................................................................................................................TTCCCAGGCTACTCCTCAGGCTGCTGCT..................... 28 1 11 0.09 1 0 1 0 0 0
.................................................................................................................................................ATCCGCATCTAGCTGCTCCACGCCGT................................................................................ 26 1 11 0.09 1 0 1 0 0 0
............................................................................................................................................................................................................CCCAGGCTACTCCTCAGGCTGCTGCTC.................... 27 1 11 0.09 1 1 0 0 0 0
.......................................................................................................................................................ATCTAGCTGCTCCACGCCGTGGCGC........................................................................... 25 0 11 0.09 1 1 0 0 0 0
........................................................................................................................................................TCTAGCTGCTCCACGCCGTGGCGC........................................................................... 24 0 11 0.09 1 1 0 0 0 0
.........................................................................................................................................................CTAGCTGCTCCACGCCGTGGCG............................................................................ 22 0 11 0.09 1 1 0 0 0 0
...........................................................................................................................................................................................................GCCCAGGCTACTCCTCAGGCTGCTCCT..................... 27 1 11 0.09 1 1 0 0 0 0
.........................................................................................................................................................................................................ATGCCCAGGCTACTCCTCAGGCTGCTGCT..................... 29 1 11 0.09 1 1 0 0 0 0
.........................................................................................................................................................................................................AAGCCCAGGCTACTCCTCAGGCTGCTGC...................... 28 2 11 0.09 1 1 0 0 0 0
.......................................................................................................................................CCGGTCCTACTTCCGCATCTAGC............................................................................................. 23 0 12 0.08 1 1 0 0 0 0
....................................................................................................................................................................................................................ACTCCTCAGGCTGCTGCTACACGGCCT............ 27 0 12 0.08 1 1 0 0 0 0
......................................................................................................................................ACCGGTCCTACTTCCGCATCT................................................................................................ 21 0 12 0.08 1 1 0 0 0 0
.......................................................................................................................................CCGGTCCTACTTCCGCATCTAGCT............................................................................................ 24 0 12 0.08 1 1 0 0 0 0
........................................................................................................................................CGGTCCTACTTCCGCATCTAGCT............................................................................................ 23 0 12 0.08 1 1 0 0 0 0
...................................................................................................................................................CCGCACCTAGCTGCTCCAAGA................................................................................... 21 3 12 0.08 1 0 0 0 1 0
....................................................................................................................................ATACCGGTCCTACTTCCGCATCTAGCT............................................................................................ 27 1 12 0.08 1 1 0 0 0 0
......................................AATAGTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 27 1 13 0.08 1 0 1 0 0 0
........................................TAGTTCTCTGCGAGTTTCAAATAGT.......................................................................................................................................................................................... 25 1 13 0.08 1 0 1 0 0 0
..................................................................................................................................................................................................................CTACTCCTCAGGCTGCTGCTACAC................. 24 0 13 0.08 1 0 1 0 0 0
........................................TAGTTATCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 25 1 13 0.08 1 0 1 0 0 0
........................................AAGTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 25 1 13 0.08 1 0 1 0 0 0
..........................................................................................................................................................................................................TGCCCAGCCTACCCCTCGGG............................. 20 3 13 0.08 1 1 0 0 0 0
........................................TAGTTCTCTGTGAGTTTCAAATGGT.......................................................................................................................................................................................... 25 1 13 0.08 1 0 1 0 0 0
..................................................................................................................................................................................................................TTACTCCTCAGGCTGCTGCTACACG................ 25 1 13 0.08 1 0 1 0 0 0
......................................ATTAGTTCTCTGTGAGTTTCAAATAGTA......................................................................................................................................................................................... 28 1 13 0.08 1 1 0 0 0 0
........................................TACTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 25 1 13 0.08 1 0 1 0 0 0
...............................................................................................................................................................................................................ATGCTACTCCTCAGGCTGCTGCTACAC................. 27 1 13 0.08 1 1 0 0 0 0
........................................TAGTTCTCTGTGAATTTCAAATAGT.......................................................................................................................................................................................... 25 1 13 0.08 1 1 0 0 0 0
...................................................................................................................................................................................................................TACTCCTCAGGCTGCTGCTACACGG............... 25 0 13 0.08 1 1 0 0 0 0
........................................................................................................................................................TCTATCTGCTCCAAGCCG................................................................................. 18 2 13 0.08 1 0 0 1 0 0
................................................................................................................................................................................................................TGCTACTCCTCAGGCTGCTGCTACAC................. 26 1 13 0.08 1 1 0 0 0 0
........................................TAGTTCTCTCTGAGTTTCAAATAGT.......................................................................................................................................................................................... 25 1 13 0.08 1 1 0 0 0 0
................................................................................................................................................................................................................GGCTAATCCTCAGGCTGCTGCTACA.................. 25 1 13 0.08 1 0 1 0 0 0
.......................................AAAGTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 26 2 13 0.08 1 0 1 0 0 0
...............................................................................................................................................................................................................ATGCTACTACTCAGGCTGCTGCTACAC................. 27 2 13 0.08 1 0 1 0 0 0
........................................TAGTTCTCCGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 25 1 13 0.08 1 0 1 0 0 0
........................................TAGTTCTCTGTGAGTTTCAACTAGT.......................................................................................................................................................................................... 25 1 13 0.08 1 0 1 0 0 0
.....................................AAATAGTTCTCTGTGAGTTTCAAATAGT.......................................................................................................................................................................................... 28 2 13 0.08 1 1 0 0 0 0
...............................................................................................................................................................................................................AGGCTACTCCTCAGGCTGCTGCTACAC................. 27 0 13 0.08 1 1 0 0 0 0
.....................................................................................................................................TACCGGTCCTACTTCCGCAT.................................................................................................. 20 0 14 0.07 1 1 0 0 0 0
.............................................................................................................................................................................................................TCAGGCTACTCCTCAGGCTGCTGCTACAC................. 29 1 14 0.07 1 0 1 0 0 0
.....................................................................................................................................TACCGGTCCTACTTCCGC.................................................................................................... 18 0 14 0.07 1 1 0 0 0 0
............................................................................................................................................................................................................CTCAGGCTACTCCTCAGGCTGCTGCT..................... 26 1 14 0.07 1 1 0 0 0 0
........................................TAGTTCTCTGTGAGTTTCAAAT............................................................................................................................................................................................. 22 0 14 0.07 1 0 1 0 0 0
........................................AAGTTCTCTGTGAGTTTCAAAT............................................................................................................................................................................................. 22 1 14 0.07 1 0 1 0 0 0
.........................................GGTTCTCTGTGAGTTTCAAAT............................................................................................................................................................................................. 21 1 15 0.07 1 0 1 0 0 0
.....................................................................................................................................TGCCGGTCCTACTTCCGC.................................................................................................... 18 1 15 0.07 1 1 0 0 0 0
..............................................................................................................................................................................................................TTGGCTACTCCTCAGGCTGCTGCTACA.................. 27 2 17 0.06 1 0 1 0 0 0
........................................................................................................................................................................................................................CGCAGGCTGTTGCTAGACG................ 19 3 20 0.05 1 0 0 0 1 0
.................................................................................................................................................TTCCGCATCCAGCTGCTCCACGCCGT................................................................................ 26 1 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................................................ATGCTACTCCTCAGGCTGCTGCTAC................... 25 1 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................................................AGGCTACTCCTCAGGCTGCTGCTG.................... 24 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................ACTCCAGGCTACTCCTCAGGCTGCTGCT..................... 28 3 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................................TTCCAGGCTACTCCTCAGGCTGCTGCT..................... 27 2 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................GCTACTCCTCAGGCTGCTGCTAC................... 23 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................................GCTGCTCCACGCCGTGGCGC........................................................................... 20 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................TAAGGCTACTCCTCAGGCTGCTGCT..................... 25 2 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................TCCAGGCTACTCCTCAGGCTTCTGCT..................... 26 2 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................................................CCATGCTACTCCTCAGGCTGCTGCT..................... 25 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................TACCGGTCCTACTTCCGCATCGAGCT............................................................................................ 26 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................CCAGGCTACTCCTCAGGCTGCTGCTGA................... 27 2 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................CCAGGCTACTCCACAGGCTGCTGC...................... 24 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................TCAGGCTACTCCTCAGGCTGCTGCTAC................... 27 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................................GGCTACTCCTCACGCTGCTGCT..................... 22 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................GTTCCAGGCTACTCCTCAGGCTGCTGCT..................... 28 3 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................CAGGCTACTCCTCAGGCTGCTTCC..................... 24 2 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................TAGGCTACTCCTCAGGCTGCTGCTA.................... 25 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................AGGCTACTCCTCAGGCTTCT........................ 20 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................................GGCTGCTGCTACACGGCCT............ 19 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................CCAGGCTACTCCTCAGGCTCCTGCT..................... 25 1 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................................................GTTTAGGCTACTCCTCAGGCTGCTGCT..................... 27 3 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................CAGGCTACTCCTCAGGTTGCTGCT..................... 24 1 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................................................CCAGGCTACTCCTCAGGCTGCTGC...................... 24 0 20 0.05 1 0 1 0 0 0
.........................................................................CAGTTGTTGGTCTAATTTTTT............................................................................................................................................................. 21 3 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................TTCAGGCTACTCCTCATGCTGCT........................ 23 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004967:2382546-2382796 + dwi_4060 CCGAATGCTAATATGAGGTTTCATGCGTGTCAATGTCATCATCAAGAGACACTCAAAGTTTAT-----------CATTCGGCGAGTAAACAACCA----AATAAA----------------------------AAAAAAAAAAAGAAAACC--------------AATATGAACG----CATT-------------TAATGCAAATA-----ATGGCCAGGATGAAGGCGTAGATCGACGAGGTGCGGCACCGCGGGCCAA--CATGGAACGCGGTG---A-CTAGCA-CGGGTCCGATGAGGAGTCCGACGACGATGT--GCCGGACTTAGCAAATCC
droVir3 scaffold_12954:360366-360409 + AACA-----------------------------------------------------------------------------------AAA----AATAAGA----AAAA------------------------AAAAAAAATAAAAAAAATA-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------TATAAA------------
droMoj3 scaffold_6385:29701-29859 - AAAA-----------------------------------------------------------------------------------AAA----AAAAAAA----AAAA------------------------AAAAACCAACAGTAGAGTAGTAAGAGCTGAACAAACCGAGAGGAATAAAT------AAA-------------CATT---------------CG-----AGATGGAGGACGCCGAATATCATAACCCAG--GATTGAGCGTCGGGTGGATCTACCA-GCGGTGCAAGGAGGAG-CTGAT----------CACGAT------------
droGri2 scaffold_15116:817363-817467 - ACAAAA-----TATGAGCTGAAATTTCTAAAAATATAGTGATTAAGAATTAT-----ATTGCTAATTTGTTAAATAATA---------AGAACTA----AAAAAAAAAAAAA---------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAT------------
dp5 Unknown_group_563:5263-5332 + GACA-----------------------------------------------------------------------------------CTT----GAA----GGTAATTATCAACAAGGAGAAAACACAGCAAAAAAAAAAAGAGGAAAAAA--------------AAT-------G-------------------------------------------------------------------------------------------------------------------------------------------------GAGACG------------
droPer2 scaffold_122:8848-8901 + AAAA-----------------------------------------------------------------------------------AAA----AAAAAAA----AAAA------------------------TAATAATAATAATA--AA--------------T-------------AAAT------AAA-------------TA-----------------GA-------------------------------------------------------------------------------------------AA--TAATAG------------
droAna3 scaffold_13417:5603460-5603536 - TAAACCA--------------------------------------------------------------------------------CCG----A------AAAACA-AA-----------------------AAAAAAAAAAAAAAAACA-------------------------------AAAATTAAAAAACAAAAAATTAAAA-----ATAAATA--------------------------------------------------------------------------------------------------AA--ATAAAG------------
droBip1 scf7180000395957:22633-22704 + AAAT-----------------------------------------------------------------------------------AAA----AAA----GGAAAAGAA-----------------------AAAC-TAA---AAAAAA----------------------ACG----ATGT-------------TAAAAAAAATA-----AGAATAAAGATGGT-------------------------------------------------------------------------------------------GA--TGGAGA------------
droKik1 scf7180000298889:3785-3840 - AACA-----------------------------------------------------------------------------------AAA----ATA----TAGAAATA------------------------AGAA----TAAGAACAAA--------------C-------------ATGA------AGT-------------CACA---------------AA-------------------------------------------------------------------------------------------ATACAAATAA------------
droFic1 scf7180000454069:108248-108296 + AGCA-----------------------------------------------------------------------------------ATA----AAA----TAATAAAA------------------------AAAA----TAAATAAACC--------------AAACCAAACAC-------------------------------------------------------------------------------------------------------------------------------------------------AATAAA------------
droEle1 scf7180000487339:30012-30084 - TTATCCA----------------------------------------------------------------------TTGGCGAATAAAT------------AAATAAA------------------------TAAATAA----A----TG-------------------------------AAT----ATACATATGAA-----TATGCATATATATG--------------------------------------------------------------------------------------------------TG--CATATA------------
droRho1 scf7180000776610:14354-14408 - AAAC-----------------------------------------------------------------------------------AAA---TA-A---ATAAATA-AG-----------------------AAAA----TAAAAAAAAA--------------C-------------ATAT------AAA-------------CATA---------------GA-------------------------------------------------------------------------------------------AA--ACACAA------------
droBia1 scf7180000301936:17004-17047 + AATA-----------------------------------------------------------------------------------AAT----AAATAAA----TAAA------------------------AAAAAGAAAAAACAAACAA-----------------------G-------------------------------------------------------------------------------------------------------------------------------------------------CAAAAA------------
droTak1 scf7180000415522:20567-20677 + AGGA-----------------------------------------------------------------------------------TGA----AGGCGGA----GATG------------------------GACGAGCAGCAGCA--GC--------------A-------------GGAA------GAG-------------CA-----------------GC------------------------------GGCAGCAGGTCGAACGGCGTA---C-GGAGGAAGAGGTCCGACGGCAATTCCAGCGACAGGAA--GCCGAA------------
dm3 chr2R:764768-764801 + TCGAC-----------------------------------------------------------------------------GATTAAAC------------AAGC--T------------------------GACAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AGAAAA------------
droSim2 node_19150:499-532 + AGTA-----------------------------------------------------------------------------------AAT----CAA----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA------------
droSec2 scaffold_42:287687-287734 + AGTT--------------------------------------------------------TAC-----------CATAAG--GATTCAATAAACG----AATTAA----------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA------------
droYak3 v2_chr2h_random_004:623047-623110 - AAAGGGA---------CTCCAAGTT-----------------------------------TCC-----------CCGTAT--GCCTTAATAAATA----AATAAAAAAA------------------------AAAAAAA----A------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA------------
droEre2 scaffold_4855:109000-109047 - GTGA-----------------------------------------------------------------------------------GTG----A------TAAACA-AA-----------------------AAAAA----AAAAACAAA--------------A-------------TTAA------AAT-------------C------------------------------------------------------------------------------------------------------AAC----------AACAAC------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CCGAATGCTAATATGAGGTTTCATGCGTGTCAATGTCATCATCAAGAGACACTCAAAGTTTAT-----------CATTCGGCGAGTAAACAACCA----AATAAA----------------------------AAAAAAAAAAAGAAAACC--------------AATATGAACG----CATT-------------TAATGCAAATA-----ATGGCCAGGATGAAGGCGTAGATCGACGAGGTGCGGCACCGCGGGCCAA--CATGGAACGCGGTG---A-CTAGCA-CGGGTCCGATGAGGAGTCCGACGACGATGT--GCCGGACTTAGCAAATCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........TAATATGAGGTTTCATGCGTGTCAAT.................................................................................................................................................................................................................................................................................................................2611.00101000
............................................................................................................................................................................................................................................................................AACGCGGTG---A-CTAGCA-CGGGTCCGA.........................................2511.00101000
..................................................................................................................................................................................................................................................................................................................CCGACGACGATGT--GCCGGACTTAG.......2411.00101000
..................................................................................................................................................................................................................................................................................................................CCGACGACGATGT--GCCGGACTTAGCAAA...2811.00101000
..............................................................................................................................................................................................................................TGAAGGCGTAGATCGACGAGGTGCGG...........................................................................................2691.00902070
.............................................................................................................................................................................................................................................ACGAGGTGCGGCACCGCGGGC.................................................................................21200.40806110
.............................................................................................................................................................................................................................................ACGAGGTGCGGCACCGCGGG..................................................................................20200.30605010
.............................................................................................................................................................................................................................................ACGAGGTGCGGCACCGCGGGCC................................................................................22200.30606000
......................................................................................................................................................................................................................................TAGATCGACGAGGTGCGGCACCGCG....................................................................................25110.27303000
...........................................................................................................................................................................................................................GGATGAAGGCGTAGATCGACGAGGT...............................................................................................2580.25200020
..............................................................................................................................................................................................................................TGAAGGCGTAGATCGACGAGGTGCGT...........................................................................................2690.22200020
.......................................................................................................................................................................................................................GCCAGGATGAAGGCGTAGATCGACG...................................................................................................2590.22201010
..............................................................................................................................................................................................................................TGAAGGCGTAGATCGACGAGGTGC.............................................................................................2490.22200020
......................................................................................................................................................................................................................................TAGATCGACGAGGTGCGGCACCGCGG...................................................................................26100.20202000
...............................................................................................................................................................................................................................GAAGGCGTAGATCGACGAGGTGCGG...........................................................................................25100.20202000
..............................................................................................................................................................................................................................TGAAGGCGTAGATCGACGAGGT...............................................................................................22100.20200020
..............................................................................................................................................................................................................................TGAAGGCGTAGATCGACGAGGTG..............................................................................................23100.20200020
......................................................................................................................................................................................................................................TAGATCGACGAGGTGCGGCACCGCGGG..................................................................................27100.20202000
..........................................................................................................................................................................................................................................TCGACGAGGTGCGGCACCGCGGG..................................................................................23200.20404000
..........................................................................................................................................................................................................................................TCGACGAGGTGCGGCACCGCGGGC.................................................................................24200.20400040
...............................................................................................................................................................................................................................................GAGGTGCGGCACCGCGGGCCAA--C...........................................................................2360.17101000
..........................................................................................................................................................................................................................................TCGACGAGGTGCGGCACCGCGGGCCAA--C...........................................................................2860.17101000
.............................................................................................................................................................................................................................................ACGAGGTGCGGCACCGCGGGCCAA--CA..........................................................................2660.17101000
................................................................................................................................................................................................................................................AGGTGCGGCACCGCGGGCCAA--CATG........................................................................2560.17101000
.....................................................................................................................................................................................................................................................CGGCACCGCGGGCCAA--CATGGAACG...................................................................2560.17100010
..........................................................................................................................................................................................................................................................................................................TGAGGAGTCCGACGACGATGT--GC................23130.15201010
................................................................................................................................................................................................................................AAGGCGTAGATCGACGAGGTG..............................................................................................21130.15201010
......................................................................................................................................................................................................................................................................................................CCGATGAGGAGTCCGACGACGATG.....................24200.15303000
.............................................................................................................................................................................................................TA-----ATGGCCAGGATGAAGGCGTAG..........................................................................................................2370.14100010
.............................................................................................................................................................................................................TA-----ATGGCCAGGATGAAGG...............................................................................................................1870.14101000
..........................................................................................................................................................................................................................AGGATGAAGGCGTAGATCGACGAGGT...............................................................................................2680.13100010
..........................................................................................................................................................................................................................AGGATGAAGGCGTAGATCGACGAGG................................................................................................2580.13100010
........................................................................................................................................................................................................................CCAGGATGAAGGCGTAGATCGACGAGG................................................................................................2780.13101000
.....................................................................................................................................................................................................................TGGCCAGGATGAAGGCGTAGATCGACG...................................................................................................2790.11101000
.............................................................................................................................................................................................................................................ACGAGGTGCGGCACCGCGGGCCAA--............................................................................24200.10202000
...........................................................................................................................................................................................................................................CGACGAGGTGCGGCACCGCGGGC.................................................................................23200.10202000
....................................................................................................................................................................................................................................CGTAGATCGACGAGGTGCGGC..........................................................................................21100.10100100
....................................................................................................................................................................................................................................CGTAGATCGACGAGGTGCGG...........................................................................................20100.10101000
.........................................................................................................................................................................................................................................ATCGACGAGGTGCGGCACCGCGGGCCT...............................................................................27100.10101000
.............................................................................................................................................................................................................................................ACGAGGTGCGGCACCGCGGGCCA...............................................................................23200.10202000
......................................................................................................................................................................................................................................................................................................CCGATGAGGAGTCCGACGACGAT......................23200.10202000
....................................................................................................................................................................................................................................................................................................GTCCGATGAGGAGTCCGACGACG........................23200.10202000
....................................................................................................................................................................................................................................................................................................GTCCGATGAGGAGTCCGACGACGATG.....................26200.10202000
............................................................................................................................................................................................................................................................................................................AGGAGTCCGACGACGATGT--G.................20200.10201010
..........................................................................................................................................................................................................................................TCGACGAGGTGCGGCACCGCGGGCC................................................................................25200.10202000
............................................................................................................................................................................................................................................................................................................AGGAGTCCGACGACGATGT--GCCG..............23200.10202000
................................................................................................................................................................................................................................AAGGCGTAGATCGACGAGGTGCGGC..........................................................................................25100.10100010
......................................................................................................................................................................................................................................TAGATCGACGAGGTGCGGCACCGC.....................................................................................24110.09101000
.......................................................................................................................................................................................................................................AGATCGACGAGGTGCGGCACCG......................................................................................22110.09101000
...............................................................................................................................................................................................................................GAAGGCGTAGATCGACGAGGT...............................................................................................21110.09110000
.....................................................................................................................................................................................................................TGGCCAGGATGAAGGCGTAGATCG......................................................................................................24120.08100010
..........................................................................................................................................................................................................................................................................................................TGAGGAGTCCGACGACGATGT--GCCGG.............26120.08101000
..........................................................................................................................................................................................................................................................................................................TGAGGAGTCCGACGACGATGT--GCC...............24130.08100010
......................................................................................................................................................................................................................................................................................................CCGATGAGGAGTCCGACGACGATGT--..................25130.08101000
......................................................................................................................................................................................................................................................................................................CCGATGAGGAGTCCGACGACGATGT--GC................27130.08100010
.........................................TCAAGAGACACTCAAAGTTTAT-----------.........................................................................................................................................................................................................................................................................22130.08100010
.......................................................................................................................................................................................................................................................................................................CGATGAGGAGTCCGACGACGATGT--..................24130.08101000
............................................................................................................................................................................................................................................................................................................AGGAGTCCGACGACGATGT--GCC...............22200.05100100
.............................................................................................................................................................................................................................................................................................................GGAGTCCGACGACGATGT--GCC...............21200.05101000
.....................................................................................................................................................................................................................................................................................................TCCGATGAGGAGTCCGACGACGA.......................23200.05101000
..............................................................................................................................................................................................................................................CGAGGTGCGGCACCGCGGGCCA...............................................................................22200.05101000
.............................................................................................................................................................................................................................................................................................................GGAGTCCGACGACGATGT--GC................20200.05100010
........................................................................................................................................................................................................................................................................................................GATGAGGAGTCCGACGACGATG.....................22200.05101000
..............................................................................................................................................................................................................................................................................................................GAGTCCGACGACGATGT--GCCGG.............22200.05101000
...................................................................................................................................................................................................................................................................................................GGTCCGATGAGGAGTCCGACGACGA.......................25200.05101000
.......................................................................................................AA----------------------------AAAAAAAAAAAGAAAAC.............................................................................................................................................................................................19200.05100010
..................................................................................................................................................................................................................................................................................................................CCGACGACGATGT--GCCGGAC...........20200.05101000
..............................................................................................................................................................................................................................................................................................................GAGTCCGACGACGATGT--GCCG..............21200.05100010
...................................................................................................................................................................................................................................................................................................GGTCCGATGAGGAGTCCG..............................18200.05101000
.............................................................................................................................................................................................................................................ACGAGGTGCGGCACCGCGA...................................................................................19200.05100010
...................................................................................................................................................................................................................................................................................................GGTCCGATGAGGAGTCCGACGACG........................24200.05100010
...................................................................................................................................................................................................................................................................................................GGTCCGATGAGGAGTCCGACGACGAT......................26200.05101000
............................................................................................................................................................................................................................................................................................................AGGAGTCCGACGACGATGT--GCCGG.............24200.05101000
.............................................................................................................................................................................................................................................ACGAGGTGCGGCACCGCG....................................................................................18200.05101000
.............................................................................................................................................................................................................................................ACGAGGTGCGGCACCGCGG...................................................................................19200.05100010
............................................................................................................................................................................................................................................................................................................AGGAGTCCGACGACGATG.....................18200.05101000
...........................................................................................................................................................................................................................................CGACGAGGTGCGGCACCGCGGGCCA...............................................................................25200.05110000
droVir3
AACA-----------------------------------------------------------------------------------AAA----AATAAGA----AAAA------------------------AAAAAAAATAAAAAAAATA-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------TATAAA------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AAAA-----------------------------------------------------------------------------------AAA----AAAAAAA----AAAA------------------------AAAAACCAACAGTAGAGTAGTAAGAGCTGAACAAACCGAGAGGAATAAAT------AAA-------------CATT---------------CG-----AGATGGAGGACGCCGAATATCATAACCCAG--GATTGAGCGTCGGGTGGATCTACCA-GCGGTGCAAGGAGGAG-CTGAT----------CACGAT------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................TCATAACCCAG--GATTGAGCGTCGG...............................................................24200.357700000
.....................................................................................................................................................................................................................................................GAATATCATAACCCAG--GATTGAGCG...................................................................25200.204400000
.......................................................................................................................................................................ACCGAGAGGAATAAAT------AAA-------------CATT---------------CG-----AGA.........................................................................................................28120.172200000
..........................................................................................................................................................................................................................................................TCATAACCCAG--GATTGAGCGTC.................................................................22200.153300000
......................................................................................................................................................................................................................................................AATATCATAACCCAG--GATTGAGCG...................................................................24200.102200000
...................................................................................................................................................................................................................................................................................................GGTGCAAGGAGGAG-CTGAT----------CA................21200.102100001
.......................................................................................................................................................................ACCGAGAGGAATAAAT------AAA-------------CATT---------------CG-----AGAA........................................................................................................29120.081100000
..................................................................................................................................................................AACAAACCGAGAGGAATAAAT------AAA-------------C.....................................................................................................................................25130.081100000
..................................................................................................................................................................AACAAACCGAGAGGAATAAAT------AAA-------------CATT---------------...................................................................................................................28130.081000010
..........................................................................................................................................................................................................................................................TCATAACCCAG--GATTGAGCGTCGGGTGG...........................................................28200.051100000
...................................................................................................................................................................................................................................................CCGAATATCATAACCCAG--GATTGAGC....................................................................26200.051000010
..........................................................................................................................................................................................................................................................TCATAACCCAG--GATTGAGCGTCGGGTGGA..........................................................29200.051000010
......................................................................................................................................................................................................................................................AATATCATAACCCAG--GATTGAG.....................................................................22200.051100000
.....................................................................................................................................................................................................................................................................................TGGATCTACCA-GCGGTGCAAGGAGG....................................25200.051100000
......................................................................................................................................................................................................................................................AATATCATAACCCAG--GATTGAGCGTCGG...............................................................28200.051100000
...........................................................................................................................................................................................................................................................CATAACCCAG--GATTGAGCGTCGGGTGG...........................................................27200.051100000
.....................................................................................................................................................................................................................................................GAATATCATAACCCAG--GATTGAG.....................................................................23200.051100000
..............................................................................................................................................................GCTGAACAAACCGAGAGGAATAAAT------......................................................................................................................................................25200.051100000
.........................................................................................................................................................................................................................................................................................TCTACCA-GCGGTGCAAGGAGGAC-.................................23200.051000010
......................................................................................................................................................................................................................................................AATATCATAACCCAG--GATTGAGCGTCG................................................................27200.051000001
............................................................................................................................................................................................................................................................ATAACCCAG--GATTGAGCG...................................................................18200.051100000
..............................................................................................................................................................................................................................................................................................CA-GCGGTGCAAGGAGGAG-CTGAT----------TTT...............26200.051100000
......................................................................................................................................................................................................................................................AATATCATAACCCAG--GATTGAGCGT..................................................................25200.051000010
droGri2
ACAAAA-----TATGAGCTGAAATTTCTAAAAATATAGTGATTAAGAATTAT-----ATTGCTAATTTGTTAAATAATA---------AGAACTA----AAAAAAAAAAAAA---------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAT------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................AAAAAAAAAAAA---------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAA...............25200.8016160
..............................................................................................A----AAAAAAAAAAAAA---------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAA.............29200.05110
.............................................................................................TA----AAAAAAAAAAAAA---------------------AAAAAAAA----------............................................................................................................................................................................................23200.05110
dp5
GACA-----------------------------------------------------------------------------------CTT----GAA----GGTAATTATCAACAAGGAGAAAACACAGCAAAAAAAAAAAGAGGAAAAAA--------------AAT-------G-------------------------------------------------------------------------------------------------------------------------------------------------GAGACG------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................TT----GAA----GGTAATTATCAACAAGGAG...........................................................................................................................................................................................................................24104.804804610001000
........................................................................................TT----GAA----GGTAATTATCAACAAGGA............................................................................................................................................................................................................................23103.303303210000000
........................................................................................TT----GAA----GGTAATTATCAACAAGG.............................................................................................................................................................................................................................22102.602602510000000
........................................................................................TT----GAA----GGTAATTATCAACAAGGAGA..........................................................................................................................................................................................................................25102.602602510000000
.......................................................................................CTT----GAA----GGTAATTATCAACAAGGA............................................................................................................................................................................................................................24101.501501500000000
.......................................................................................CTT----GAA----GGTAATTATCAACAAGG.............................................................................................................................................................................................................................23100.8080600000200
........................................................................................TT----GAA----GGTAATTATCAACAAGGAGAAA........................................................................................................................................................................................................................27100.7070601000000
........................................................................................TT----GAA----GGTAATTATCAACAAGGAGAA.........................................................................................................................................................................................................................26100.7070610000000
...............................................................................................AA----GGTAATTATCAACAAGGAGAAA........................................................................................................................................................................................................................24100.6060000000510
.........................................................................................T----GAA----GGTAATTATCAACAAGGAG...........................................................................................................................................................................................................................23100.6060600000000
...............................................................................................AA----GGTAATTATCAACAAGGAGAAAACAC....................................................................................................................................................................................................................2890.3330000000030
...............................................................................................AA----GGTAATTATCAACAAGGAGAAAA.......................................................................................................................................................................................................................2590.2220000000200
........................................................................................TT----GAA----GGTAATTATCAACAAG..............................................................................................................................................................................................................................21100.2020200000000
.........................................................................................T----GAA----GGTAATTATCAACAAGGA............................................................................................................................................................................................................................22100.2020200000000
........................................................................................TT----GAA----GGTAATTATCAACAAGGAGAAAA.......................................................................................................................................................................................................................2890.1110100000000
...............................................................................................AA----GGTAATTATCAACAAGGAGAAAAC......................................................................................................................................................................................................................2690.1110000000100
...............................................................................................AA----GGTAATTATCAACAAGGAGAAAACA.....................................................................................................................................................................................................................2790.1110000000100
................................................................................................A----GGTAATTATCAACAAGGAGAAAAA......................................................................................................................................................................................................................2590.1110000000010
.......................................................................................CTT----GAA----GGTAATTATCAACAAGGAG...........................................................................................................................................................................................................................25100.1010100000000
...............................................................................................AA----GGTAATTATCAACAAGGAGA..........................................................................................................................................................................................................................22100.1010000000100
.......................................................................................CTT----GAA----GGTAATTATCAACAA...............................................................................................................................................................................................................................21100.1010100000000
GACA-----------------------------------------------------------------------------------CTT----GAA----GGTAATTATCAAC.................................................................................................................................................................................................................................23100.1010000000100
........................................................................................TT----GAA----GGTAATTATCAACAAGGG............................................................................................................................................................................................................................23100.1010010000000
........................................................................................TT----GAA----GGTAATTATCAACAAGGAC...........................................................................................................................................................................................................................24100.1010001000000
.........................................................................................T----GAA----GGTAATTATCAACAAGGAGA..........................................................................................................................................................................................................................24100.1010100000000
.......................................................................................CTT----GAA----GGTAATTATCAACG................................................................................................................................................................................................................................20100.1010100000000
.......................................................................................CTT----GAA----GGTAATTATCAACAAGGAGA..........................................................................................................................................................................................................................26100.1010100000000
........................................................................................TT----GAA----GGTAATTATCAACAAGGAGT..........................................................................................................................................................................................................................25100.1010100000000
........................................................................................TT----GAA----GGTAATTATCAACAAGGAA...........................................................................................................................................................................................................................24100.1010100000000
droPer2
AAAA-----------------------------------------------------------------------------------AAA----AAAAAAA----AAAA------------------------TAATAATAATAATA--AA--------------T-------------AAAT------AAA-------------TA-----------------GA-------------------------------------------------------------------------------------------AA--TAATAG------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TAAACCA--------------------------------------------------------------------------------CCG----A------AAAACA-AA-----------------------AAAAAAAAAAAAAAAACA-------------------------------AAAATTAAAAAACAAAAAATTAAAA-----ATAAATA--------------------------------------------------------------------------------------------------AA--ATAAAG------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................CG----A------AAAACA-AA-----------------------AAAAAAAA......................................................................................................................................................................................................19200.051010000
.........................................................................................G----A------AAAACA-AA-----------------------AAAAAAAAAAAA..................................................................................................................................................................................................22200.051010000
droBip1
AAAT-----------------------------------------------------------------------------------AAA----AAA----GGAAAAGAA-----------------------AAAC-TAA---AAAAAA----------------------ACG----ATGT-------------TAAAAAAAATA-----AGAATAAAGATGGT-------------------------------------------------------------------------------------------GA--TGGAGA------------SizeHit CountTotal NormTotal
No Reads
droKik1
AACA-----------------------------------------------------------------------------------AAA----ATA----TAGAAATA------------------------AGAA----TAAGAACAAA--------------C-------------ATGA------AGT-------------CACA---------------AA-------------------------------------------------------------------------------------------ATACAAATAA------------SizeHit CountTotal NormTotal
No Reads
droFic1
AGCA-----------------------------------------------------------------------------------ATA----AAA----TAATAAAA------------------------AAAA----TAAATAAACC--------------AAACCAAACAC-------------------------------------------------------------------------------------------------------------------------------------------------AATAAA------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTATCCA----------------------------------------------------------------------TTGGCGAATAAAT------------AAATAAA------------------------TAAATAA----A----TG-------------------------------AAT----ATACATATGAA-----TATGCATATATATG--------------------------------------------------------------------------------------------------TG--CATATA------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAAC-----------------------------------------------------------------------------------AAA---TA-A---ATAAATA-AG-----------------------AAAA----TAAAAAAAAA--------------C-------------ATAT------AAA-------------CATA---------------GA-------------------------------------------------------------------------------------------AA--ACACAA------------SizeHit CountTotal NormTotal
No Reads
droBia1
AATA-----------------------------------------------------------------------------------AAT----AAATAAA----TAAA------------------------AAAAAGAAAAAACAAACAA-----------------------G-------------------------------------------------------------------------------------------------------------------------------------------------CAAAAA------------SizeHit CountTotal NormTotal
No Reads
droTak1
AGGA-----------------------------------------------------------------------------------TGA----AGGCGGA----GATG------------------------GACGAGCAGCAGCA--GC--------------A-------------GGAA------GAG-------------CA-----------------GC------------------------------GGCAGCAGGTCGAACGGCGTA---C-GGAGGAAGAGGTCCGACGGCAATTCCAGCGACAGGAA--GCCGAA------------SizeHit CountTotal NormTotal
No Reads
dm3
TCGAC-----------------------------------------------------------------------------GATTAAAC------------AAGC--T------------------------GACAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AGAAAA------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
TCGAC-----------------------------------------------------------------------------GATTAAAC------------AAGC--T------------------------GACAAAAA----------............................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GATTAAAC------------AAGC--T------------------------GACAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AGA...............2613.0030000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCGAC-----------------------------------------------------------------------------GATTAAAC------------AAGC--T------------------------GACA..........................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
TCGAC-----------------------------------------------------------------------------GATTAAAC------------AAGC--T------------------------..............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCGAC-----------------------------------------------------------------------------GATTAAAC------------AAGC--T------------------------GACAAA........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GATTAAAC------------AAGC--T------------------------GACAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AGAA..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GAC-----------------------------------------------------------------------------GATTAAAC------------AAGC--T------------------------GACAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------A.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TAAAC------------AAGC--T------------------------GACAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AGAAA.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AAC------------AAGC--T------------------------GACAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AGA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................TTAAAC------------AAGC--T------------------------GACAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AGA...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AC-----------------------------------------------------------------------------GATTAAAC------------AAGC--T------------------------GACAAA........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................TAAAC------------AAGC--T------------------------GACAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------GA................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGTA-----------------------------------------------------------------------------------AAT----CAA----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................AAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA------------23206.351270001270000000000000
................................................................................................A----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAA..............23204.2084000000000000084000
.........................................................................................................AAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAA..............18203.5070000000000000070000
...............................................................................................AA----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA------------26200.5511011000000000000000
.......................................................................................AAT----CAA----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAA.............2920.50100000000000001000
...........................................................................................................AA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA------------18200.45900000000000090000
................................................................................................A----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAA.............24200.40880000000000000000
.......................................................................................AAT----CAA----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAA..............2830.33100000000000001000
...A-----------------------------------------------------------------------------------AAT----CAA----AAAAAAAA------------------------AAAAAAA.......................................................................................................................................................................................................22110.18200000000000002000
...A-----------------------------------------------------------------------------------AAT----CAA----AAAAAAAA------------------------AAAAAAAA----------............................................................................................................................................................................................2370.14100000000000001000
........................................................................................AT----CAA----AAAAAAAA------------------------AAAAAAAA----------A-----------------------....................................................................................................................................................................22180.11201000000000001000
........................................................................................AT----CAA----AAAAAAAA------------------------AA............................................................................................................................................................................................................15200.10200000000000020000
........................................................................................AT----CAA----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AA................25100.10100000000000001000
........................................................................................AT----CAA----AAAAAAAA------------------------AAAAAA........................................................................................................................................................................................................19200.10200000000000011000
........................................................................................AT----CAA----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAA...............26100.10100000000000001000
........................................................................................AT----CAA----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------..................23120.08100000000000001000
...A-----------------------------------------------------------------------------------AAT----CAA----AAAAAAAA------------------------AAAAAA........................................................................................................................................................................................................21180.06100000000000001000
........................................................................................AT----CAA----AAAAAAAA------------------------AAAAAAAA----------............................................................................................................................................................................................21200.05100000000000001000
.........................................................................................T----CAA----AAAAAAAA------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAA...............25200.05100000000000001000
...A-----------------------------------------------------------------------------------AAT----CAA----AAAAAAAA------------------------AA............................................................................................................................................................................................................17200.05100000000000001000
.......................................................................................AAT----CAA----AAAAAAAA------------------------AAAAA.........................................................................................................................................................................................................19200.05100000000000001000
.........................................................................................T----CAA----AAAAAAAA------------------------AAAAA.........................................................................................................................................................................................................17200.05100000000000001000
droSec2
AGTT--------------------------------------------------------TAC-----------CATAAG--GATTCAATAAACG----AATTAA----------------------------AAAAAAAA----------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AAAGGGA---------CTCCAAGTT-----------------------------------TCC-----------CCGTAT--GCCTTAATAAATA----AATAAAAAAA------------------------AAAAAAA----A------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................A----AATAAAAAAA------------------------AAAAAAA----A------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------..................21200.15300300000000
....................................................................................................ATAAAAAAA------------------------AAAAAAA----A------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAA...............22200.10210100000000
..............................................................................................A----AATAAAAAAA------------------------AAAAAAA----A------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAA..............25100.10100100000000
..............................................................................................A----AATAAAAAAA------------------------AAAAAAA----A------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAA...............24120.08100100000000
..............................................................................................A----AATAAAAAAA------------------------AAAAAAA----A------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------A.................22200.05100100000000
...................................................................................................AATAAAAAAA------------------------AAAAAAA----A------A-----------------------A-------------------------------------------------------------------------------------------------------------------------------------------------AAAA..............24200.05100100000000
droEre2
GTGA-----------------------------------------------------------------------------------GTG----A------TAAACA-AA-----------------------AAAAA----AAAAACAAA--------------A-------------TTAA------AAT-------------C------------------------------------------------------------------------------------------------------AAC----------AACAAC------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................AAACA-AA-----------------------AAAAA----AAAAACAAA--------------..............................................................................................................................................................................21110.0911000000
..............................................................................................A------TAAACA-AA-----------------------AAAAA----AAAAA................................................................................................................................................................................................19160.0610100000

Generated: 05/18/2015 at 09:25 AM