ID:

dwi_4010

 Coordinate:

scf2_1100000004963:3690412-3690643 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.6 -34.6 -34.6 -34.5

Flybase annnotation

CDS [Dwil\GK14838-cds]; CDS [Dwil\GK14838-cds]; exon [dwil_GLEANR_1513:4]; exon [dwil_GLEANR_1513:5]; intron [Dwil\GK14838-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTGCATCCTGAATATCGCCCTAAGCGTCCTACTAATCAATTTGTTCCAAGGTATGTTGACGCCGATCTCAACGAAGAAATAGATTAAAGACAGACTTGAATCAAGAAGAGTATCAAGAATCAAGAACAAACACCCAAACACCCGAATACCCAATCATTGGCTTCTTCTTGATTATAAAGATTCAAGTGCACATATATATGAAATTTATATGCAAATAATGATTTTTCTCTATTCTTATTTTTCTCCCTTCTTTGGTTGTCCATCTTCTTCGTCCTTCGTTAGGCTGTACGGCTTTAAAATACACAGCTTAGCTTATCAAATTCAACTACAGG
**************************************************.....((............((((((((...(((.....((((.(((.(((...(((((((((...(((((..((((.........................((((((((.........((..((((((..((((.(((......))).)))).))))))..))..)))))))).))))..))))))))))))))...)))...))))))).....)))...)).))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M020
head
 V117
male body		 M045
female body
 V119
head
....ATCCTGAATATCGCCCTAAGC................................................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................................................................GATTATAAAGATTCAAGTGCACATAT......................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.....................AAGCGTCCTACTAATCAATTTGTT............................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
...............CGCCCTAAGCGTCCTACTAAT........................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0
..............................ACTAATCAATTTGTTCCAAGGC........................................................................................................................................................................................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0
.....................AAGCGTCCTACTAATCAATTT.................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.........................GTCCTACTAATCAATTTGTTCCAA........................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0
...............................................................................................................................................................................AAAGATTCAAGTGCACATA.......................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0
...................CTAAGCGTCCTACTAATCAATT................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.....TCCTGAATATCGCCCTAAGCG.................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
................GCCCTAAGCGTCCTACTAATCAATT................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
....................TAAGCGTCCTACTAATCAATTT.................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
...........................CCTACTAATCAATTTGTTCCAAGGCT....................................................................................................................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0
.................................AATCAATTTGTTCCAAGGCT....................................................................................................................................................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0
.....................................................................................................................AATCAAGAACACCCACCAAAACA................................................................................................................................................................................................ 23 3 3 0.33 1 1 0 0 0 0
........................................................................................................................................................ATCATTGGCTTTTTCTGGA................................................................................................................................................................. 19 2 5 0.20 1 0 0 0 1 0
............................................................................................................................................................................................................................................................................................TGTACGGGTTTAAACTTC.............................. 18 3 20 0.10 2 1 0 0 0 1
.........................................................................................................................................................................................................................................................................................................AATACAGAACTTAGCTTA................. 18 2 14 0.07 1 1 0 0 0 0

Anti-sense strand reads

CACGTAGGACTTATAGCGGGATTCGCAGGATGATTAGTTAAACAAGGTTCCATACAACTGCGGCTAGAGTTGCTTCTTTATCTAATTTCTGTCTGAACTTAGTTCTTCTCATAGTTCTTAGTTCTTGTTTGTGGGTTTGTGGGCTTATGGGTTAGTAACCGAAGAAGAACTAATATTTCTAAGTTCACGTGTATATATACTTTAAATATACGTTTATTACTAAAAAGAGATAAGAATAAAAAGAGGGAAGAAACCAACAGGTAGAAGAAGCAGGAAGCAATCCGACATGCCGAAATTTTATGTGTCGAATCGAATAGTTTAAGTTGATGTCC
**************************************************.....((............((((((((...(((.....((((.(((.(((...(((((((((...(((((..((((.........................((((((((.........((..((((((..((((.(((......))).)))).))))))..))..)))))))).))))..))))))))))))))...)))...))))))).....)))...)).))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V118
embryo
 M020
head
.................................................................................................................................................................................................................................AGAGATAAGAATAAAAAGAGGGA.................................................................................... 23 0 1 1.00 1 1 0 0 0
.................................................................................................................................TGTGGGTTTGTGAGCTTA......................................................................................................................................................................................... 18 1 4 0.50 2 0 2 0 0
...................................................................................................................................TGGGTTTGTGAGCTTATC....................................................................................................................................................................................... 18 2 18 0.33 6 3 1 2 0
................................................................................................................................ATGTGGGTTTGTGGGCGTAT........................................................................................................................................................................................ 20 2 4 0.25 1 0 1 0 0
..........................................CAAGGTTCCAGATAGCTG................................................................................................................................................................................................................................................................................ 18 3 20 0.15 3 1 0 0 2
.................................................................................................................................TGTGGGTTTGTGGGCGTATC....................................................................................................................................................................................... 20 2 9 0.11 1 0 1 0 0
................................................................................................................................ATGTGGGTTTGTGGGCGTA......................................................................................................................................................................................... 19 2 11 0.09 1 0 1 0 0
............................................................................................................................TTGTTGGTGGGTTTGGGGG............................................................................................................................................................................................. 19 2 11 0.09 1 1 0 0 0
.....AGGTCTTATAGCCGGATTG.................................................................................................................................................................................................................................................................................................................... 19 3 18 0.06 1 1 0 0 0
...................................................................................................................TCTGGGTTCTTGTTTGTG....................................................................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0
.................GGGAATCGCAGGACGCTT......................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004963:3690362-3690693 - dwi_4010 GTGCATCCTG--------------AATATCGCCCTAAGCGTCCTACTAATCAATTTGTTCCAAGGTATGTTGACGCCGATCTCAACGAAGAAATAGATTAAAGACAGACTTGAATCAAGAAGAGTATCAAGAATCAAGAACAAACACCCAAACACCCGAATACCCAATCATTGGCTTCTTCTTGATTATAAAGATTCAAGTGCACATATATATGAAATTTATATGCA---------------------------------------------------------------------------------------------------------------AATAATGATTTTTCTCTATTCTTATTTTTCTCCCTTCTTTGGTTGTCCATCTTCTTCGTCCTTCGTT-----------------------------AGGCTGTACGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAACTACAGG
droVir3 scaffold_12875:4713414-4713505 + TTTTTCTCTC--------------TTTTTATTTTCTTTTCTTTTTTTTTTCTTTTTGTTGTCAATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTA----------------------------CGCGTGTAATGCGTTCAAGCTTAAAGCT-------------------------------------------CACCTTA-----------------
droMoj3 scaffold_6496:18601642-18601824 + ATGGACGAGG--------------GCCA---GACT---------------------------------------------------------------------------GAAGTTAAGAAAAAAAAAAAAAAAAAAAAAAA----------------------------------------------------------------------------------AAAAACAAGTGAATCTCCAGCACGTCGAAAAGTTTATACACTTTATGAGTAGACTGATCCTAAGAGCGTTTGCCTGACATTTGCCACTCTCCATAGCTATGATATTTATATACAAACAGAAATATTTCCCTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15081:1297578-1297769 + TATACATATG--------------TATATATA------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------ATATATAAATAATATATATATA---------------------------------------------------------------------------------------------------------------TATATTTTTTTTTTCATATGTCTATTATTTGTATTTAACTACTTATAAAAAT------------TGCA----------------------------CGCGTTTTTCCCCTCTTAGGTTTATATTTTTCTTATAATTTAAGGCAGATATTTATATATATTCTCTTATATATATAAACATATTCAAATGTAGC
dp5 XL_group1e:3938941-3938992 - AGGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGCTTTAAAATTCACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGG
droPer2 scaffold_17:873887-873942 - GTGCATCCCG--------------AGTATCGGCCCAAGCGTCCTACTAACCAATTTGTTCCACGGTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droAna3 scaffold_13417:1465848-1465903 + GTGCATCCCG--------------AGTATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droBip1 scf7180000396558:1870-1926 - GTGCATCCCG--------------AATATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT
droKik1 scf7180000302544:1063789-1063885 - AATTAGGAGC-----------------------------------------------------------------------------------------------------------------------------------CAACTCTCACATATGTAGACATACACCCACTGGCTTCCCTATATACATACATGCCTAGGTCCACATATGTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACATATACACATA
droFic1 scf7180000453277:154345-154401 + GTGCATCCCG--------------AGTATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----
droEle1 scf7180000491023:476135-476276 - ATTTTCCTCGATATACTTATACTCAACATCATTTTATACCTTCTATGT------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATAT------------CCAACACGAATCCTGCAACTTTAACTACAAACAGGCTGTATGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGG
droRho1 scf7180000777255:23288-23339 + AGGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGG
droBia1 scf7180000298389:1490510-1490562 + TAGGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGG
droTak1 scf7180000414375:195360-195411 - AGGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGG
droEug1 scf7180000409110:98810-98896 - CATTAACTTT--------------TGTTTCGGTTTAATAATAAAATTGAAAATTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------AAGAGATTTATCTAGA---------------------------------------------------------------------------------------------------------------TGTGATGTTTTTTCTTGTTTGTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------TT
dm3 chrX:11688992-11689044 + GTGCATCCCG--------------AATATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:11069051-11069103 + GTGCATCCCG--------------AATATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_36:362751-362803 + GTGCATCCCG--------------AATATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:15009860-15009916 - GTGCATCCCG--------------AATATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT
droEre2 scaffold_4690:3511900-3511952 - TAGGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GTGCATCCTG--------------AATATCGCCCTAAGCGTCCTACTAATCAATTTGTTCCAAGGTATGTTGACGCCGATCTCAACGAAGAAATAGATTAAAGACAGACTTGAATCAAGAAGAGTATCAAGAATCAAGAACAAACACCCAAACACCCGAATACCCAATCATTGGCTTCTTCTTGATTATAAAGATTCAAGTGCACATATATATGAAATTTATATGCA---------------------------------------------------------------------------------------------------------------AATAATGATTTTTCTCTATTCTTATTTTTCTCCCTTCTTTGGTTGTCCATCTTCTTCGTCCTTCGTT-----------------------------AGGCTGTACGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAACTACAGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....ATCCTG--------------AATATCGCCCTAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200020
.......................................................................................................................................................................................GATTATAAAGATTCAAGTGCACATAT................................................................................................................................................................................................................................................................................................................................2611.00100010
...................................AAGCGTCCTACTAATCAATTTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.............................CGCCCTAAGCGTCCTACTAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
............................................ACTAATCAATTTGTTCCAAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
...................................AAGCGTCCTACTAATCAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.......................................GTCCTACTAATCAATTTGTTCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.............................................................................................................................................................................................AAAGATTCAAGTGCACATA.................................................................................................................................................................................................................................................................................................................................1911.00101000
.................................CTAAGCGTCCTACTAATCAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.....TCCTG--------------AATATCGCCCTAAGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
..............................GCCCTAAGCGTCCTACTAATCAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..................................TAAGCGTCCTACTAATCAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.........................................CCTACTAATCAATTTGTTCCAAGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...............................................AATCAATTTGTTCCAAGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100010
droVir3
TTTTTCTCTC--------------TTTTTATTTTCTTTTCTTTTTTTTTTCTTTTTGTTGTCAATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTA----------------------------CGCGTGTAATGCGTTCAAGCTTAAAGCT-------------------------------------------CACCTTA-----------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
ATGGACGAGG--------------GCCA---GACT---------------------------------------------------------------------------GAAGTTAAGAAAAAAAAAAAAAAAAAAAAAAA----------------------------------------------------------------------------------AAAAACAAGTGAATCTCCAGCACGTCGAAAAGTTTATACACTTTATGAGTAGACTGATCCTAAGAGCGTTTGCCTGACATTTGCCACTCTCCATAGCTATGATATTTATATACAAACAGAAATATTTCCCTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................TTAAGAAAAAAAAAAAAAAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................25100.101100000
droGri2
TATACATATG--------------TATATATA------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------ATATATAAATAATATATATATA---------------------------------------------------------------------------------------------------------------TATATTTTTTTTTTCATATGTCTATTATTTGTATTTAACTACTTATAAAAAT------------TGCA----------------------------CGCGTTTTTCCCCTCTTAGGTTTATATTTTTCTTATAATTTAAGGCAGATATTTATATATATTCTCTTATATATATAAACATATTCAAATGTAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
AGGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGCTTTAAAATTCACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GTGCATCCCG--------------AGTATCGGCCCAAGCGTCCTACTAACCAATTTGTTCCACGGTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
GTGCATCCCG--------------AGTATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..GCATCCCG--------------AGTATCGTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.TGCATCCCG--------------AGTATCGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
........................AGTATCGTCCCAAGCGTCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....ATCCCG--------------AGTATCGTCCCAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............................GTCCCAAGCGTCCTACTAATCAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
....ATCCCG--------------AGTATCGTCCCAAGCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...............................................AATCAGTTTGTTCCAAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331010000
droBip1
GTGCATCCCG--------------AATATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCACGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTSizeHit CountTotal NormTotal
No Reads
droKik1
AATTAGGAGC-----------------------------------------------------------------------------------------------------------------------------------CAACTCTCACATATGTAGACATACACCCACTGGCTTCCCTATATACATACATGCCTAGGTCCACATATGTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACATATACACATASizeHit CountTotal NormTotal
No Reads
droFic1
GTGCATCCCG--------------AGTATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----SizeHit CountTotal NormTotal
No Reads
droEle1
ATTTTCCTCGATATACTTATACTCAACATCATTTTATACCTTCTATGT------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATAT------------CCAACACGAATCCTGCAACTTTAACTACAAACAGGCTGTATGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGGSizeHit CountTotal NormTotal
No Reads
droRho1
AGGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGGSizeHit CountTotal NormTotal
No Reads
droBia1
TAGGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGGSizeHit CountTotal NormTotal
No Reads
droTak1
AGGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGGSizeHit CountTotal NormTotal
No Reads
droEug1
CATTAACTTT--------------TGTTTCGGTTTAATAATAAAATTGAAAATTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------AAGAGATTTATCTAGA---------------------------------------------------------------------------------------------------------------TGTGATGTTTTTTCTTGTTTGTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTSizeHit CountTotal NormTotal
No Reads
dm3
GTGCATCCCG--------------AATATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................GTCCCAAGCGTCCTACTAATCAGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TATCGTCCCAAGCGTCCTACTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AAGCGTCCTACTAATCAGTTTGTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATCGTCCCAAGCGTCCTACTAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TATCGTCCCAAGCGTCCTACTAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................GTCCCAAGCGTCCTACTAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CGTCCCAAGCGTCCTACTAATCAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000
...........................................TACTAATCAGTTTGTTCCAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........CG--------------AATATCGTCCCAAGCGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................GCGTCCTACTAATCAGTTTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTCCCAAGCGTCCTACTAATCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.....TCCCG--------------AATATCGTCCCAAGCGTCCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATATCGTCCCAAGCGTCCTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CG--------------AATATCGTCCCAAGCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCGTCCCAAGCGTCCTACTAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATCCCG--------------AATATCGTCCCAAGCGTCCTACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATCGTCCCAAGCGTCCTACTAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCATCCCG--------------AATATCGTCCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATCGTCCCAAGCGTCCTACTAATCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CCCAAGCGTCCTACTAATCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCCCAAGCGTCCTACTAATCAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................................CAAGCGTCCTACTAATCAGTTTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................GTCCTACTAATCAGTTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CGTCCCAAGCGTCCTACTAATCAGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................GTCCTACTAATCAGTTTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCCCG--------------AATATCGTCCCAAGCGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTCCCAAGCGTCCTACTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCGTCCCAAGCGTCCTACTAATCAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................TCCCAAGCGTCCTACTAATCAGTTTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CCCAAGCGTCCTACTAATCAGTTTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CTAATCAGTTTGTTCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...............................TCCCAAGCGTCCTACTAATCAGTTTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
............................................ACTAATCAGTTTGTTCCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CCCAAGCGTCCTACTAATCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................CCAAGCGTCCTACTAATCAGTTTGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CCAAGCGTCCTACTAATCAGTTTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CCG--------------AATATCGTCCCAAGCGTCCTACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AATATCGTCCCAAGCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........CG--------------AATATCGTCCCAAGCGTCCTACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCCCAAGCGTCCTACTAATCAGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCGTCCCAAGCGTCCTACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCGTCCCAAGCGTCCTACTAATCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................CGTCCCAAGCGTCCTACTAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CCCAAGCGTCCTACTAATCAGTTTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..................................CAAGCGTCCTACTAATCAGTTTGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CCG--------------AATATCGTCCCAAGCGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCATCCCG--------------AATATCGTCCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGCGTCCTACTAATCAGTTTGTTCCAAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CCG--------------AATATCGTCCCAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCCCG--------------AATATCGTCCCAAGCGTCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........G--------------AATATCGTCCCAAGCGTCCTACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCATCCCG--------------AATATCGTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCCCG--------------AATATCGTCCCAAGCGTCCTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
................................................ATCAGTTTGTTCCAAGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droSim2
GTGCATCCCG--------------AATATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................TCCTACTAATCAGTTTGTTCCAAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...............................................AATCAGTTTGTTCCAAGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2020.50101000000000000000
droSec2
GTGCATCCCG--------------AATATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GTGCATCCCG--------------AATATCGTCCCAAGCGTCCTACTAATCAGTTTGTTCCAAGGTGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....ATCCCG--------------AATATCGTCCCAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00210100000000
....ATCCCG--------------AATATCGTCCCAAGCGTCCTACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
droEre2
TAGGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATGGCTTTAAAATACACAGCT-------------------------------------------TAGCTTATCAAATTCAGCTGCAGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGCT-------------------------------------------TAGCTTATCAA.............1911.0010001000
..GGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATGGCTTTAAAATACACAG.....................................................................2511.0011000000

Generated: 05/18/2015 at 09:09 AM