ID:

dwi_4

 Coordinate:

scf2_1100000004921:2305204-2305268 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.6 -35.6

Flybase annnotation

intron [Dwil\GK22466-in]; utr5 [utr5_plus_11464]

No Repeatable elements found

Sense Strand Reads

GAATGTCAAATTTTCTGACTCCTGCAACTCATGTAAGGCTTCACCAAGCAGCCCGGATTCTGCGAGTGCTGCGCTACAACAAGAACTAAGACGTAGCACCACATGATTCGGCTTCATGGTGAAGTACATCGCAACGTCATCGTGTTGAAGACTTAATCTTATCCA

***********************************..(((((((((...((((.(((((.((...((((((((((.............)).))))))))..)).)))))))))...)))))))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total M020

head

 M045

female body

 V118

embryo

 V119

head

 V117

male body
.............................................................................................TAGCACCACATGATTCGGCTT................................................... 21 0 1 202227.00 202227 176389 13307 8634 2997 900
.............................................................................................TAGCACCACATGATTCGGCT.................................................... 20 0 1 6359.00 6359 4497 479 816 501 66
.............................................................................................TAGCACCACATGATTCGGCTTT.................................................. 22 1 1 5641.00 5641 4108 827 427 236 43
.............................................................................................TAGCACCACATGATTCGGCTG................................................... 21 1 1 1899.00 1899 1814 78 4 3 0
.............................................................................................TAGCACCACATGATTCGGCTC................................................... 21 1 1 1240.00 1240 1219 11 6 3 1
.............................................................................................TAGCACCACATGATTCGGCTTA.................................................. 22 1 1 1082.00 1082 743 158 151 23 7
.............................................................................................TAGCACCACATGATTCGGCTTC.................................................. 22 0 1 1063.00 1063 831 61 111 51 9
..............................................................................................AGCACCACATGATTCGGCTT................................................... 20 0 1 690.00 690 20 657 6 6 1
.............................................................................................TATCACCACATGATTCGGCTT................................................... 21 1 1 588.00 588 536 17 23 12 0
.............................................................................................TAGCACCACATGGTTCGGCTT................................................... 21 1 1 544.00 544 531 3 7 3 0
.........................................................................CTACAACAAGAACTAAGACG........................................................................ 20 0 1 481.00 481 1 1 377 99 3
.............................................................................................TAGCACCACATGATTCGGCC.................................................... 20 1 1 441.00 441 441 0 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTA................................................... 21 1 1 440.00 440 307 66 58 8 1
.............................................................................................TAGCACCACATGATTCGGCTTG.................................................. 22 1 1 384.00 384 327 20 18 16 3
.............................................................................................TAGCACCGCATGATTCGGCTT................................................... 21 1 1 331.00 331 314 6 7 4 0
.............................................................................................TAGCACCACATGATTCGGC..................................................... 19 0 1 311.00 311 225 25 31 30 0
.............................................................................................TACCACCACATGATTCGGCTT................................................... 21 1 1 295.00 295 276 10 6 2 1
..................................................GCCCGGATTCTGCGAGTGCTGCG............................................................................................ 23 0 1 234.00 234 0 17 171 41 5
.............................................................................................TAGCGCCACATGATTCGGCTT................................................... 21 1 1 203.00 203 181 9 10 3 0
.............................................................................................TAGCACCACATGATTCGGCCT................................................... 21 1 1 193.00 193 174 5 5 5 4
.............................................................................................TGGCACCACATGATTCGGCTT................................................... 21 1 1 168.00 168 153 6 9 0 0
.............................................................................................TAGCACCACATGCTTCGGCTT................................................... 21 1 1 154.00 154 143 0 6 5 0
.............................................................................................TAGCACCACATGATTCGGCTTTT................................................. 23 2 1 125.00 125 76 33 11 3 2
.............................................................................................CAGCACCACATGATTCGGCTT................................................... 21 1 1 104.00 104 82 6 9 7 0
.............................................................................................TAGCACCACATTATTCGGCTT................................................... 21 1 1 100.00 100 82 8 7 3 0
.............................................................................................TAGCACCACATGATTCGGCG.................................................... 20 1 1 99.00 99 99 0 0 0 0
.............................................................................................TAGCACCACGTGATTCGGCTT................................................... 21 1 1 90.00 90 74 5 8 2 1
.............................................................................................TAGCACCACACGATTCGGCTT................................................... 21 1 1 86.00 86 65 7 11 2 1
.............................................................................................TAGTACCACATGATTCGGCTT................................................... 21 1 1 84.00 84 68 2 9 5 0
................................................................................................CACCACATGATTCGGCTT................................................... 18 0 1 81.00 81 69 8 2 2 0
.............................................................................................TAGCACCACATGATTCAGCTT................................................... 21 1 1 81.00 81 70 6 4 1 0
.............................................................................................TAGCACCACATAATTCGGCTT................................................... 21 1 1 77.00 77 30 37 3 7 0
..............................................................................................TACACCACATGATTCGGCTT................................................... 20 2 1 76.00 76 69 2 2 3 0
.............................................................................................TAGCATCACATGATTCGGCTT................................................... 21 1 1 73.00 73 61 1 8 2 1
.............................................................................................TAACACCACATGATTCGGCTT................................................... 21 1 1 67.00 67 49 6 8 3 1
.............................................................................................TAGCACCACATGATTCGGCTTAA................................................. 23 1 1 65.00 65 11 34 19 0 1
.............................................................................................TAGCACCATATGATTCGGCTT................................................... 21 1 1 64.00 64 56 1 5 2 0
.............................................................................................TAGCACCACATGACTCGGCTT................................................... 21 1 1 63.00 63 45 10 3 4 1
.............................................................................................TAGCACCACATGATTAGGCTT................................................... 21 1 1 59.00 59 27 5 14 12 1
.............................................................................................TATCACCACATGATTCGGCT.................................................... 20 1 1 59.00 59 49 0 6 3 1
.............................................................................................TAGCACCACATGATTTGGCTT................................................... 21 1 1 57.00 57 47 1 2 6 1
.............................................................................................TAGCACCAAATGATTCGGCTT................................................... 21 1 1 56.00 56 40 0 7 9 0
........................................................................................CGTGGTAGCACCACATGATTCGGCTT................................................... 26 3 1 55.00 55 55 0 0 0 0
.............................................................................................TAGCACCACATGTTTCGGCTT................................................... 21 1 1 54.00 54 53 0 1 0 0
............................................................................................CTAGCACCACATGATTCGGCTT................................................... 22 1 1 54.00 54 2 16 30 5 1
..................................................GCCCGGATTCTGCGAGTGCTG.............................................................................................. 21 0 1 49.00 49 4 14 22 7 2
.............................................................................................TAGCACCACATCATTCGGCTT................................................... 21 1 1 48.00 48 23 18 7 0 0
..................................................GCCCGGATTCTGCGAGTGCTGC............................................................................................. 22 0 1 47.00 47 0 4 22 21 0
.............................................................................................TAGCACCACATGATTCTGCTT................................................... 21 1 1 47.00 47 20 7 18 2 0
.............................................................................................TAGCACCACATGATTCGGCTGG.................................................. 22 2 1 46.00 46 46 0 0 0 0
.............................................................................................TAGCACCACATGATTCGACTT................................................... 21 1 1 46.00 46 31 3 6 6 0
...............................................................................................GCACCACATGATTCGGCTT................................................... 19 0 1 45.00 45 14 27 3 0 1
.............................................................................................TACCACCACATGATTCGGCT.................................................... 20 1 1 44.00 44 41 3 0 0 0
.............................................................................................TAGCACTACATGATTCGGCTT................................................... 21 1 1 43.00 43 32 3 4 4 0
.............................................................................................TAGCACCACATGATTCGGCTTCT................................................. 23 1 1 42.00 42 31 4 4 2 1
.............................................................................................TAGCACCACATGATTCGGATT................................................... 21 1 1 42.00 42 11 1 22 8 0
.............................................................................................TAGCACCACATGATTCGTCTT................................................... 21 1 1 41.00 41 12 3 21 5 0
.............................................................................................TAGCACCACATGATTCGGCTTAAA................................................ 24 2 1 40.00 40 2 27 11 0 0
.............................................................................................AAGCACCACATGATTCGGCTT................................................... 21 1 1 40.00 40 31 4 3 2 0
..............................................................................................AGCACCACATGATTCGGCTTT.................................................. 21 1 1 38.00 38 1 37 0 0 0
.............................................................................................TAGCACCACATGATTCGGTTT................................................... 21 1 1 38.00 38 31 0 4 3 0
.............................................................................................TAGCAACACATGATTCGGCTT................................................... 21 1 1 38.00 38 31 1 2 4 0
.............................................................................................TAGCACCACATGATTCGGCTTCA................................................. 23 0 1 38.00 38 7 4 19 8 0
.............................................................................................TAGAACCACATGATTCGGCTT................................................... 21 1 1 37.00 37 11 1 17 8 0
.............................................................................................TAGCACCACATGATTCGG...................................................... 18 0 1 37.00 37 1 11 17 8 0
.............................................................................................TAGCACCACATGATACGGCTT................................................... 21 1 1 37.00 37 28 5 1 3 0
.............................................................................................TAGCACCTCATGATTCGGCTT................................................... 21 1 1 37.00 37 29 1 6 1 0
.............................................................................................TAGCACCACATGATCCGGCTT................................................... 21 1 1 36.00 36 21 3 7 4 1
.............................................................................................TAGCACCACATGATTCGGCTTTA................................................. 23 1 1 36.00 36 25 8 2 1 0
.............................................................................................TAGCACCACATGATTGGGCTT................................................... 21 1 1 30.00 30 26 1 2 0 1
..............................................................................................AGCACCACATGATTCGGCT.................................................... 19 0 1 28.00 28 0 27 0 1 0
.............................................................................................TAGCACCACATGATTCGCCTT................................................... 21 1 1 27.00 27 9 3 7 8 0
...............................................................................................TCACCACATGATTCGGCTT................................................... 19 1 1 26.00 26 26 0 0 0 0
.............................................................................................GAGCACCACATGATTCGGCTT................................................... 21 1 1 25.00 25 19 2 0 4 0
.............................................................................................TAGCAGCACATGATTCGGCTT................................................... 21 1 1 25.00 25 22 0 1 2 0
............................................................................................GTAGCACCACATGATTCGGCTT................................................... 22 0 1 25.00 25 2 22 1 0 0
.............................................................................................TAGCACCACATGATTCCGCTT................................................... 21 1 1 23.00 23 13 1 4 5 0
.............................................................................................TAGCACCACATGATTCGGGTT................................................... 21 1 1 22.00 22 22 0 0 0 0
.............................................................................................TAGCACCACATGATTCGGCGG................................................... 21 2 1 22.00 22 22 0 0 0 0
.............................................................................................TAGCACAACATGATTCGGCTT................................................... 21 1 1 19.00 19 15 1 2 1 0
.............................................................................................TAGCACCACATGATTCGGCTTTG................................................. 23 2 1 18.00 18 16 2 0 0 0
.............................................................................................TCGCACCACATGATTCGGCTT................................................... 21 1 1 18.00 18 8 0 6 4 0
.............................................................................................TATCACCACATGATTCGGCTTT.................................................. 22 2 1 18.00 18 15 1 2 0 0
.............................................................................................TAGCACCCCATGATTCGGCTT................................................... 21 1 1 17.00 17 11 2 1 1 2
.............................................................................................TAGCACCACCTGATTCGGCTT................................................... 21 1 1 17.00 17 12 1 3 1 0
.............................................................................................TAGCACCACATGATTCGGCTGA.................................................. 22 2 1 15.00 15 14 1 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTGT.................................................. 22 2 1 15.00 15 13 2 0 0 0
..............................................................................................TCCACCACATGATTCGGCTT................................................... 20 2 1 15.00 15 15 0 0 0 0
.............................................................................................TAGCACCACATGGTTCGGCT.................................................... 20 1 1 14.00 14 13 0 0 1 0
............................................................................................TTAGCACCACATGATTCGGCTT................................................... 22 1 1 14.00 14 0 14 0 0 0
.............................................................................................TAGCACCAGATGATTCGGCTT................................................... 21 1 1 14.00 14 13 0 1 0 0
.................................................................................................ACCACATGATTCGGCTTT.................................................. 18 1 2 13.00 26 25 1 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTTCC................................................. 23 1 1 13.00 13 7 3 0 1 2
.............................................................................................TAGCACCGCATGATTCGGCT.................................................... 20 1 1 13.00 13 6 1 2 4 0
.............................................................................................TAGCACCACAAGATTCGGCTT................................................... 21 1 1 12.00 12 9 1 1 1 0
...............................TGTAAGGCTTCACCAAGCA................................................................................................................... 19 0 1 12.00 12 0 0 12 0 0
.............................................................................................TAGCACGACATGATTCGGCTT................................................... 21 1 1 12.00 12 12 0 0 0 0
.............................................................................................TAGCACCACTTGATTCGGCTT................................................... 21 1 1 11.00 11 10 1 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTTTC................................................. 23 2 1 11.00 11 2 8 0 1 0
.............................................................................................TAGCACCACATTATTCGGCT.................................................... 20 1 1 11.00 11 9 1 1 0 0
.............................................................................................TAGCACCACATGATTCGGCTTGT................................................. 23 2 1 11.00 11 9 0 1 1 0
..............................................................................................ACCACCACATGATTCGGCTT................................................... 20 1 1 11.00 11 10 0 1 0 0
.............................................................................................TAGCACCACATGATTCGGCTTAT................................................. 23 2 1 10.00 10 2 3 4 0 1
.............................................................................................TAGGACCACATGATTCGGCTT................................................... 21 1 1 10.00 10 9 0 1 0 0
.............................................................................................TAGCACCGCATGATTCGGCTTT.................................................. 22 2 1 10.00 10 7 2 0 1 0
.............................................................................................TAGCCCCACATGATTCGGCTT................................................... 21 1 1 10.00 10 5 1 2 2 0
.............................................................................................TAACACCACATGATTCGGCT.................................................... 20 1 1 9.00 9 6 0 1 2 0
.............................................................................................TAGCACCACAGGATTCGGCTT................................................... 21 1 1 9.00 9 5 3 1 0 0
..............................................................................................AGCACCACATGATTCGGCTTA.................................................. 21 1 1 9.00 9 0 8 1 0 0
.............................................................................................TAGCACCACATGATTCGGCTTAAAA............................................... 25 3 1 9.00 9 0 7 2 0 0
.............................................................................................TAGCACCACATGATTCGGCTTTAA................................................ 24 2 1 9.00 9 1 4 2 2 0
.............................................................................................TATCACCACATGATTCGGCTC................................................... 21 2 1 9.00 9 9 0 0 0 0
..........................................................................TACAACAAGAACTAAGACG........................................................................ 19 0 1 8.00 8 0 1 7 0 0
..................................................GCCCGGATTCTGCGAGTGCTGCGT........................................................................................... 24 1 1 8.00 8 0 0 2 4 2
.............................................................................................TAGCACCACATGATTCGGCGT................................................... 21 1 1 8.00 8 8 0 0 0 0
.............................................................................................TAGCACCACATGGTTCGGCTTT.................................................. 22 2 1 8.00 8 6 0 0 2 0
.............................................................................................TAGCAACACATGATTCGGCT.................................................... 20 1 1 8.00 8 5 0 0 3 0
.............................................................................................TAGCACCACATGATTCGGCTTCG................................................. 23 1 1 8.00 8 6 1 1 0 0
.............................................................................................TAGCTCCACATGATTCGGCTT................................................... 21 1 1 7.00 7 5 0 1 1 0
.............................................................................................TAGCGCCACATGATTCGGCT.................................................... 20 1 1 7.00 7 3 2 2 0 0
.................................................AGCCCGGATTCTGCGAGTGCTGC............................................................................................. 23 0 1 7.00 7 0 0 4 3 0
.............................................................................................TAGCACCACATGATTCGGCAT................................................... 21 1 1 7.00 7 6 0 1 0 0
............................................................................................ATAGCACCACATGATTCGGCTT................................................... 22 1 1 7.00 7 0 7 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTTTCC................................................ 24 3 1 7.00 7 1 3 0 3 0
.............................................................................................TAGCACCACATGAATCGGCTT................................................... 21 1 1 7.00 7 4 0 1 2 0
.............................................................................................TAGCACCACATGATTCGACT.................................................... 20 1 1 7.00 7 5 1 1 0 0
.............................................................................................TAGCACCACATGATTCGGCA.................................................... 20 1 1 7.00 7 2 2 3 0 0
..............................................................................................TGCACCACATGATTCGGCTT................................................... 20 1 1 7.00 7 6 1 0 0 0
.............................................................................................TAGCACCACATGATTCAGCT.................................................... 20 1 1 7.00 7 5 0 2 0 0
.............................................................................................TAGCACCACATGCTTCGGCT.................................................... 20 1 1 6.00 6 1 0 3 1 1
.........................................................................................GTGGTAGCACCACATGATTCGGCTT................................................... 25 2 1 6.00 6 6 0 0 0 0
..............................................................................................AGCACCACATGATTCGGCTG................................................... 20 1 1 6.00 6 0 6 0 0 0
.............................................................................................CAGCACCACATGATTCGGCT.................................................... 20 1 1 6.00 6 1 1 2 2 0
.............................................................................................TATCACCACATTATTCGGCTT................................................... 21 2 1 6.00 6 6 0 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTGTT................................................. 23 3 1 6.00 6 6 0 0 0 0
...............................................................................................TCACCACATGATTCGGCT.................................................... 18 1 1 6.00 6 5 0 1 0 0
.............................................................................................TAGCACCACATGATTAGGCT.................................................... 20 1 1 6.00 6 1 0 2 3 0
.............................................................................................TAGCACCACATGATTCGAC..................................................... 19 1 1 5.00 5 5 0 0 0 0
.............................................................................................TAGCACCACATGATTTGGGTT................................................... 21 2 1 5.00 5 5 0 0 0 0
.............................................................................................TAGCACCACATGATTCTGCT.................................................... 20 1 1 5.00 5 0 1 2 2 0
.............................................................................................CACCACCACATGATTCGGCTT................................................... 21 2 2 5.00 10 8 1 0 1 0
.............................................................................................TGGCACCACATGATTCGGCTTT.................................................. 22 2 1 5.00 5 3 0 0 2 0
.............................................................................................TAGCACTACATGATTCGGCT.................................................... 20 1 1 5.00 5 4 0 0 1 0
.............................................................................................TAGCACCACATGATTCGGCTAA.................................................. 22 2 1 5.00 5 2 3 0 0 0
.............................................................................................TAGCACCACATGAGTCGGCTT................................................... 21 1 1 5.00 5 5 0 0 0 0
.............................................................................................TAGCACCACATGGTTCGGCTC................................................... 21 2 1 5.00 5 5 0 0 0 0
.................................................................................................ACCACATGATTCGGCTTA.................................................. 18 1 1 5.00 5 5 0 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTAAA................................................. 23 2 1 5.00 5 0 3 2 0 0
.............................................................................................TAGCACCACATGGTTCGGCTG................................................... 21 2 2 4.50 9 9 0 0 0 0
.............................................................................................TAGCCCCACATGATTCGGCT.................................................... 20 1 1 4.00 4 0 0 2 2 0
.............................................................................................TAGCACCACATGATTCGGAC.................................................... 20 2 1 4.00 4 4 0 0 0 0
............................................................................................CTAGCACCACATGATTCGGCT.................................................... 21 1 1 4.00 4 0 1 0 3 0
.............................................................................................TAGCACCACATAATTCGGCTTT.................................................. 22 2 1 4.00 4 0 2 0 2 0
.............................................................................................TATCACCACATGATTCGGCC.................................................... 20 2 2 4.00 8 8 0 0 0 0
.............................................................................................TAGAACCACATGATTCGGCT.................................................... 20 1 1 4.00 4 1 0 1 2 0
..............................................................................................AGCACCACATGATTCGGCTTC.................................................. 21 0 1 4.00 4 0 4 0 0 0
.............................................................................................TAGCACCACATGATTCGGATTT.................................................. 22 2 1 4.00 4 0 0 1 3 0
..................................................GCCCGGATTCTGCGAGTGCT............................................................................................... 20 0 1 4.00 4 1 1 0 1 1
.............................................................................................TAGCACCACATGATTTGGCT.................................................... 20 1 1 4.00 4 3 0 0 1 0
.............................................................................................TAGCACCACATGATTCGGCCC................................................... 21 2 1 4.00 4 4 0 0 0 0
.................................................AGCCCGGATTCTGCGAGTGCTGCG............................................................................................ 24 0 1 4.00 4 0 1 3 0 0
.............................................................................................TAGCACCACATGATTCGGTT.................................................... 20 1 1 4.00 4 2 0 1 1 0
.............................................................................................TAGCACCACACGATTCGGCTTT.................................................. 22 2 1 4.00 4 1 2 1 0 0
.............................................................................................TAGCACCACATGATTCGGCTTTAAA............................................... 25 3 1 4.00 4 0 1 3 0 0
.............................................................................................TAGCACCACATGATTCGGTTTT.................................................. 22 2 1 4.00 4 3 0 0 0 1
.............................................................................................TAGCACCGCATGATTCGGCTTC.................................................. 22 1 1 4.00 4 3 0 1 0 0
.............................................................................................GACCACCACATGATTCGGCTT................................................... 21 2 1 4.00 4 4 0 0 0 0
.............................................................................................TAGCACCACATGATTCGCTT.................................................... 20 2 2 3.50 7 0 2 2 3 0
.............................................................................................TACCACCACATGATTCGGCTTA.................................................. 22 2 1 3.00 3 2 0 1 0 0
.............................................................................................TAGCACCACATGATTGGGGTT................................................... 21 2 1 3.00 3 3 0 0 0 0
.............................................................................................TTGCACCACATGATTCGGCTT................................................... 21 1 1 3.00 3 2 0 1 0 0
..............................................................................................AGCACCACATGCTTCGGCTT................................................... 20 1 1 3.00 3 0 3 0 0 0
.............................................................................................TAGAACCACATGATTCGGCTTC.................................................. 22 1 1 3.00 3 0 0 1 2 0
.............................................................................................TAGCACAACATGATTCGGCTTT.................................................. 22 2 1 3.00 3 1 0 2 0 0
.............................................................................................TATCACCACATGATTCGGCTG................................................... 21 2 1 3.00 3 3 0 0 0 0
.............................................................................................TAGCACCATATGATTCGGCTTT.................................................. 22 2 1 3.00 3 1 0 0 1 1
.............................................................................................TAGCACCACATGATTCGGCCTT.................................................. 22 2 1 3.00 3 1 1 0 0 1
.............................................................................................TAGCACCCCATGATTCGGCT.................................................... 20 1 1 3.00 3 1 0 1 1 0
.............................................................................................TAGCACCACATGATTCGGAT.................................................... 20 1 1 3.00 3 0 0 2 1 0
.............................................................................................TAGCACCACATGATTGGGTTT................................................... 21 2 1 3.00 3 3 0 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTAC.................................................. 22 1 1 3.00 3 2 0 0 1 0
.............................................................................................TAGCACCACATCATTCGGCT.................................................... 20 1 1 3.00 3 2 1 0 0 0
...........................................................................................GTTAGCACCACATGATTCGGCTT................................................... 23 2 1 3.00 3 0 3 0 0 0
.............................................................................................TAGTACCACATGATTCGGCTG................................................... 21 2 1 3.00 3 3 0 0 0 0
.............................................................................................TAGCATCACATGATTCGGCT.................................................... 20 1 1 3.00 3 2 0 0 1 0
.........................................................................................GTGGTAGCACCACATGATTCGGCTG................................................... 25 3 1 3.00 3 3 0 0 0 0
.............................................................................................TAGCACCACATAATTCGGCT.................................................... 20 1 1 3.00 3 0 2 0 1 0
.............................................................................................TAGCACCACATGGTTCGGCTTC.................................................. 22 1 1 3.00 3 3 0 0 0 0
.................................................AGCCCGGATTCTGCGAGTGCTG.............................................................................................. 22 0 1 3.00 3 2 1 0 0 0
.............................................................................................TACCACCACATGATTCGGCC.................................................... 20 2 1 3.00 3 3 0 0 0 0
.............................................................................................TAGCACCACATGACTCGGCT.................................................... 20 1 1 3.00 3 1 0 0 2 0
.............................................................................................TAGCACCACATGATTCAGCTTT.................................................. 22 2 1 3.00 3 2 0 0 1 0
.............................................................................................TAGCACCACATGCTTCGGCTTT.................................................. 22 2 1 3.00 3 2 0 0 1 0
........................................................................................CGTGGTAGCACCACATGATTCGGCT.................................................... 25 3 1 3.00 3 3 0 0 0 0
.............................................................................................TAGCACCAAATGATTCGGCTTT.................................................. 22 2 1 3.00 3 1 0 1 1 0
.............................................................................................TAGCACCACATGATCCGGCT.................................................... 20 1 1 3.00 3 2 0 0 1 0
.............................................................................................TGGCACCACATGATTCGGCT.................................................... 20 1 1 3.00 3 3 0 0 0 0
..............................................................................................AGCACCACATGATTCGGCTTAAA................................................ 23 2 1 3.00 3 0 3 0 0 0
................................................................................................CACCACATGATTCGGCTTT.................................................. 19 1 1 3.00 3 1 1 0 1 0
.............................................................................................TAGCACCACATGATTCTGCTTT.................................................. 22 2 1 3.00 3 0 0 2 1 0
.............................................................................................TAGCGCCACATGATTCGGCTTA.................................................. 22 2 1 3.00 3 1 1 1 0 0
.............................................................................................TAACACCACATGATTCGGCTTA.................................................. 22 2 1 3.00 3 2 1 0 0 0
.............................................................................................TAGTACCACATGATTCGGCTTT.................................................. 22 2 1 3.00 3 2 1 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTTGA................................................. 23 1 1 3.00 3 3 0 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTTCCC................................................ 24 2 1 3.00 3 0 3 0 0 0
.............................................................................................TATCACCACATGATTCGGCTTC.................................................. 22 1 1 3.00 3 1 0 2 0 0
..................................................GCCCGGATTCTGCGAGTGCTGT............................................................................................. 22 1 1 2.00 2 0 0 0 2 0
.............................................................................................TAGCACCACGTGATTCGGCT.................................................... 20 1 1 2.00 2 0 0 2 0 0
.............................................................................................TAGCACCACAAGATTCGGCT.................................................... 20 1 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTTTGT................................................ 24 2 1 2.00 2 0 2 0 0 0
.............................................................................................TAGCGCCACATGATTCGGCTTT.................................................. 22 2 1 2.00 2 2 0 0 0 0
................................................CAGCCCGGATTCTGCGAGTGCTG.............................................................................................. 23 0 1 2.00 2 1 0 1 0 0
.............................................................................................TAGCACCACATGATTCGGCTGC.................................................. 22 1 1 2.00 2 2 0 0 0 0
..................................................GCCCGGCTTCTGCGAGTGCTGCG............................................................................................ 23 1 1 2.00 2 0 0 2 0 0
.............................................................................................CGGCACCACATGATTCGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCAAATGATTCGGCT.................................................... 20 1 1 2.00 2 0 0 1 1 0
.............................................................................................TAGCACCACATTATTCGGCTTT.................................................. 22 2 1 2.00 2 0 1 0 1 0
..................................................................................................................CATGGTGAAGTACATCGC................................. 18 0 1 2.00 2 0 0 2 0 0
.............................................................................................TAGCACCACATGATACGGCT.................................................... 20 1 1 2.00 2 0 0 2 0 0
..................................................TCCCGGATTCTGCGAGTGCTGCG............................................................................................ 23 1 1 2.00 2 0 0 1 1 0
.............................................................................................TAGCACCACATGATTCAGCTTG.................................................. 22 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCACATGATTCGTT..................................................... 19 2 1 2.00 2 0 1 0 1 0
.............................................................................................TATCGCCACATGATTCGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0
.............................................................................................TATCACCACATGGTTCGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0
.............................................................................................TACCACCACATGGTTCGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCACATGATTCGGCCTC.................................................. 22 1 1 2.00 2 1 0 0 0 1
..................................................GCCCGGATTCTACGAGTGCTGCG............................................................................................ 23 1 1 2.00 2 0 0 1 1 0
..............................................................................................AGCACCACATGATTCGGCTTAA................................................. 22 1 1 2.00 2 0 2 0 0 0
.............................................................................................TAGCACCATATGATTCGGCT.................................................... 20 1 1 2.00 2 1 0 0 1 0
......................................................................................TAAGACGTAGCACCACATGATTCGGCT.................................................... 27 0 1 2.00 2 1 1 0 0 0
.............................................................................................TCCCACCACATGATTCGGCT.................................................... 20 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTAT.................................................. 22 2 1 2.00 2 1 0 1 0 0
.............................................................................................TAGCACCACATGATTCGGCTTAG................................................. 23 2 1 2.00 2 1 1 0 0 0
..................................................GTCCGGATTCTGCGAGTGCTGCG............................................................................................ 23 1 1 2.00 2 0 0 2 0 0
.................................................AGCCCGGATTCTGCGAGTGCT............................................................................................... 21 0 1 2.00 2 0 0 1 0 1
.............................................................................................TAGCACCGCATGATTCGGCTTG.................................................. 22 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCATCACATGATTCGGCTTG.................................................. 22 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCGCCACATGATTCGGCTG................................................... 21 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCACGTGATTCGGCTTC.................................................. 22 1 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTAAAA................................................ 24 3 1 2.00 2 0 2 0 0 0
.............................................................................................TATCACCACATGATTCGGCTTA.................................................. 22 2 1 2.00 2 1 0 1 0 0
.............................................................................................TAGCATCACATGATTCGGCTTT.................................................. 22 2 1 2.00 2 1 0 1 0 0
.............................................................................................TAGCGCCACATGATTCGGCTC................................................... 21 2 1 2.00 2 2 0 0 0 0
.........................................................................CTACAACAAGAACTAAGAC......................................................................... 19 0 1 2.00 2 0 0 2 0 0
.............................................................................................TAGCACCACACGATTCGGCT.................................................... 20 1 1 2.00 2 1 0 1 0 0
.............................................................................................TATCACCGCATGATTCGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0
.............................................................................................CAGCACCACATGATTCGGCTG................................................... 21 2 1 2.00 2 2 0 0 0 0
.............................................................................................TATCACCACATGATTCGGCCT................................................... 21 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCACATGATGCGGCTT................................................... 21 1 1 2.00 2 1 1 0 0 0
.............................................................................................TAGCACCACATGATTCGGCTTTTT................................................ 24 2 1 2.00 2 0 2 0 0 0
.............................................................................................TTGCACCACATGATTCGGCTTT.................................................. 22 2 1 2.00 2 2 0 0 0 0
............................................................................................TTAGCACCACATGATTCGGCTTA.................................................. 23 2 1 2.00 2 0 2 0 0 0
.............................................................................................TAGCACCACATGATTCGCCTTC.................................................. 22 1 1 2.00 2 0 0 2 0 0
.............................................................................................TAGCACCGCATGATTCGGCC.................................................... 20 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCACATGATTTGGCTTT.................................................. 22 2 1 2.00 2 1 1 0 0 0
............................................................................................CTAGCACCACATGATTCGGCTTT.................................................. 23 2 1 2.00 2 0 0 0 2 0
.............................................................................................TAGTACCACATGATTCGGCT.................................................... 20 1 1 2.00 2 0 0 2 0 0
..............................................................................................ATCACCACATGATTCGGCTG................................................... 20 2 1 2.00 2 2 0 0 0 0
..................................................GCCCGGATTCTGTGTGTGCTGCG............................................................................................ 23 2 1 2.00 2 0 2 0 0 0
...........................................................................................ACTAGCACCACATGATTCGGCTT................................................... 23 2 1 2.00 2 0 2 0 0 0
..................................................GCCAGGATTCTGCGAGTGCTGCG............................................................................................ 23 1 1 2.00 2 0 0 2 0 0
.............................................................................................TAGCACCACATGGTTCGGC..................................................... 19 1 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCGCATGATTCGGCTTTG................................................. 23 3 1 2.00 2 1 1 0 0 0
.........................................................................................GTGGTAGCACCACATGATTCGGCT.................................................... 24 2 1 2.00 2 2 0 0 0 0
.........................................................................CTACATCAAGAACTAAGACG........................................................................ 20 1 1 2.00 2 0 0 1 1 0
.............................................................................................TAGCACCACATCATTCGGCTTT.................................................. 22 2 1 2.00 2 0 1 1 0 0
.............................................................................................TAGCACCACATAATTCGGCTTA.................................................. 22 2 1 2.00 2 0 2 0 0 0
.............................................................................................TAGCACCACATGATTCGTCTTT.................................................. 22 2 1 2.00 2 0 0 1 1 0
..............................................................................................TACACCACATGATTCGGCT.................................................... 19 2 2 2.00 4 4 0 0 0 0
.....................................................................................CTAAGACGTAGCACCACATGATTC........................................................ 24 0 1 2.00 2 0 0 1 0 1
...................................................CCCGGATTCTGCGAGTGCTGCG............................................................................................ 22 0 1 2.00 2 0 2 0 0 0
.............................................................................................TAGCACCACATGCTTCGGCTC................................................... 21 2 1 2.00 2 2 0 0 0 0
..............................................................................................AGCACCACATGGTTCGGCTT................................................... 20 1 1 2.00 2 0 2 0 0 0
...........................................................................................TATAGCACCACATGATTCGGCTT................................................... 23 2 1 2.00 2 0 2 0 0 0
......................................................................................TAAGACGTAGCACCACATGATTCGGC..................................................... 26 0 1 2.00 2 0 2 0 0 0
...........................................................................................AATAGCACCACATGATTCGGCTT................................................... 23 2 1 2.00 2 0 1 1 0 0
..............................................................................................AGCACCACATGATTCGGCTTCA................................................. 22 0 1 2.00 2 0 0 1 1 0
.............................................................................................TAACACCACATGATTCGGCTTT.................................................. 22 2 1 2.00 2 1 0 0 1 0
.............................................................................................TACCACCACATGATTCGGCTG................................................... 21 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCACATGATTCCGCTC................................................... 21 2 1 2.00 2 2 0 0 0 0
.............................................................................................TAGCACCGCATGAATCGGCTT................................................... 21 2 1 1.00 1 1 0 0 0 0
.............................................................................................TAGCACCACATGGTTCGGCCT................................................... 21 2 1 1.00 1 1 0 0 0 0
.............................................................................................TAGCACCACGTGATTCGGCTTA.................................................. 22 2 1 1.00 1 1 0 0 0 0
.................................................AGCCCGGATTCTGCGAGTGC................................................................................................ 20 0 1 1.00 1 0 0 1 0 0
...........................................................................................ATTAGCACCACATGATTCGGCTT................................................... 23 2 1 1.00 1 0 1 0 0 0
..................................................GCACGGATTCTGCGAGTGCTGCG............................................................................................ 23 1 1 1.00 1 0 0 1 0 0
.............................................................................................TAGCACCACATGATTCCCCTT................................................... 21 2 1 1.00 1 0 0 0 0 1
..................................................GCCCGGATTCTGCGAGTGCTGG............................................................................................. 22 1 1 1.00 1 1 0 0 0 0
.............................................................................................TAGAACCACATGATTCGGCTTT.................................................. 22 2 1 1.00 1 0 0 0 1 0
.............................................................................................TAGCACCACATGTTTCGGCTC................................................... 21 2 1 1.00 1 1 0 0 0 0
.............................................................................................TGGCACCACATGATTCGGC..................................................... 19 1 1 1.00 1 1 0 0 0 0
..................................................GCCCGGATTCTGCGAGTGCTGAGA........................................................................................... 24 2 1 1.00 1 0 0 0 1 0
..................................................GCCCGGATTCTGCGAGTGC................................................................................................ 19 0 1 1.00 1 0 0 1 0 0
.........................................................................ATACAACAAGAACTAAGACG........................................................................ 20 1 1 1.00 1 0 0 1 0 0
.............................................................................................AAGCACCACATGATTCGGCTTG.................................................. 22 2 1 1.00 1 1 0 0 0 0
............................................................................................CTAGCACCACAGGATTCGGCTT................................................... 22 2 1 1.00 1 0 1 0 0 0
.............................................................................................TAGCACCACATGATTTGGTTT................................................... 21 2 1 1.00 1 1 0 0 0 0
..................................................GCCCGGATTCTGCGAGTGCTGCGTT.......................................................................................... 25 1 1 1.00 1 0 0 0 0 1
.............................................................................................TAGCACCACATGATTAGGCTTA.................................................. 22 2 1 1.00 1 1 0 0 0 0
.............................................................................................TAGCACCACATGACTCGGCTC................................................... 21 2 1 1.00 1 1 0 0 0 0
.............................................................................................TAGCACCATATGATTCGGCTTTA................................................. 23 2 1 1.00 1 0 0 1 0 0

Anti-sense strand reads

CTTACAGTTTAAAAGACTGAGGACGTTGAGTACATTCCGAAGTGGTTCGTCGGGCCTAAGACGCTCACGACGCGATGTTGTTCTTGATTCTGCATCGTGGTGTACTAAGCCGAAGTACCACTTCATGTAGCGTTGCAGTAGCACAACTTCTGAATTAGAATAGGT

************************************..(((((((((...((((.(((((.((...((((((((((.............)).))))))))..)).)))))))))...)))))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total M045

female body

 M020

head

 V118

embryo
..................................................GGGCCCTAAGCCGCTCACGAC.............................................................................................. 21 3 1 1.00 1 0 1 0
........................GTTTAGTACATTCCGAAGAAGT....................................................................................................................... 22 3 1 1.00 1 1 0 0
........................................AGTGATGCGTCGGGCCTA........................................................................................................... 18 2 2 0.50 1 0 0 1
..........AAAAGGCTGACGACGTTGA........................................................................................................................................ 19 2 13 0.08 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004921:2305154-2305318 - dwi_4 confident G------------AATGTCAAATTTTCTGACTCCTGC----AACTCATGT------------------------AAGGCTTCACCAAGCAGCCCGGATTCTGCGAGTGCTGCGC----TACAA---------C--AAGAACTAAGACGTAGCACCACATGATTCGGCTTCATGGTGAAGTACATCGCAACGT------CATC------------GTGTTGA--A-GACT----TAA---------------------------T----CTTATCCA--
droVir3 scaffold_13047:12148428-12148583 - dvi-mir-995 Known_mirbase G------------AATGT---------------------------CAAACGGCTTGGCCGGCTCAACA---------GCTGTACAACGAAGCCCGGATACTGTGTGTGTTGCGC----TGTTT------------AGAGG----TACGTAGCACCACATGATTCGGCTTCGTGGTGCACGCA------ACTGCAACAGA--G---GGCGTCAACGGTATTT--ATT-------------------------------AATAT--------AGGCTA--
droMoj3 scaffold_6540:29636959-29637116 + dmo_11 confident G------------AATGT---------------------------CAAACAGCTTGGCTGGCTTGGTA---------GCTGAACTACGAAGCCCGGGTTTTGTGTGTGCCGCGC----TGTTT---------T----GAG----TACGTAGCACCACATGATTCGGCTTGGTAGTACAGGCT------CATTCAACAAATTA---GGCATC---AATTTTA-TA-G----------------------------ATTAAT---A----CGTGCCAA--
droGri2 scaffold_14830:1051310-1051461 + dgr_7 confident G------------AATGT---------------------------CAAATG---------------------------CTGTACAGTGAAGCCCGGATTCTGTGTGTGCTGCGTTTGCTGATTTGCCATACACATAAATA----TACGTAGCACCACATGATTCGGCTTCGTGGTGCTAGCA------ACTC------CATC------------GCCAGT-----------------TAG-----ATAGATAA-ATCAAT---C----AAGATATC--
dp5 2:5900242-5900411 + dps-mir-995 Known_mirbase G------------AATGT---------------------------CAAACACCTC-GCAGGCTCTGCAGCAGACCCTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGC----TGTGT---------TCTTAAAA----GCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACAC--------------CTTC------------AGTATC---------CAAGTCGC------------ATTC-ATTAATACT-GACATGTATACA--
droPer2 scaffold_19:1637061-1637229 + dpe_4 confident G------------AATGT---------------------------CAAACACCTC-GCAGGCTCTGCAGCAGACCCTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGC----TGTGT---------TCTTAAAA----GCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACAC--------------CTTC------------AGTATC---------CAAGTCGC------------ATTC-ATTAATACT-GAC-ATTATGTA--
droAna3 scaffold_13340:13021647-13021777 - dan_14 confident A------------AATGT---------------------------CATTCGC--------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGAGCTGCGC----CGTTCT-----------TTCTA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAT--------------CATC------------CTGTTG---GCT-GA----CAC-----------------A---------AGAA-ATTCGCCA--
droBip1 scf7180000396691:1899367-1899504 - A------------AATGT---------------------------CATTCGC--------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGGGCTGCGC----CGTTTT----TTTCT--GGCTA----ACCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAT--------------CATC------------TTGTAA---T-TTGT----CAA-----------------A---------AGAA-ATTCTCCAAA
droKik1 scf7180000302307:196871-197015 - A------------AATGT---------------------------TTTTCAC--------------------------CTGCACCACGCAGCCCGGATTCTGTGGGGGCTGCGC----TGTTCC----CCT-TTCCGCCA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGCCAG--------------CATCCAC---------GGA--------TCGC----CACCCGGAATTACCCG----------AAA--------AGTTCA--
droFic1 scf7180000453930:227807-227955 - G------------AGTGT---------------------------CATTCAC--------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGAGCTGCGC----TGTTTA----TACTC--CAAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGCGCAGGACAG--------------CATC------------GGCTGTA------GCCATAAAGC------------CTAC--CCAATATT-GGC-TCCATTTA--
droEle1 scf7180000491080:437446-437579 + G------------AATGT---------------------------CATTCAC--------------------------CTGCACCCCGCAGCCCGGATTCTGTGGCGGCTGCGC----TGCTTC----TAC-TATCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------------CACC------------GGATTGC--A-TAGT----CAG---------------------------A----GTTACCAA--
droRho1 scf7180000779659:137873-138006 + G------------AATGT---------------------------CCTTCGC--------------------------CTGCACCCCGAAGCCCGGATTCTGTGGAGGCTGCGC----TGCTTC----TTT-TCTCAAAT----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------------CATC------------GGCTTCC--A-AAGC----CAC---------------------------C----ATTACACA--
droBia1 scf7180000302402:9398405-9398548 + G------------AATGT---------------------------CAATCAC--------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGC----TGTTTC----TACCTCCCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAG--------------CATC------------GCGTGCT-------C----CAACTACAGCCAACAG----------AAA--------AAGCTA--
droTak1 scf7180000415409:611564-611706 + G------------AATGT---------------------------CACCCAC--------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGGGCTGCGC----TGTTTC----TGC-CGCCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------------CATC------------TAATCTC------TA----CAACTAGAGTTTACT-----------A--------TCCATCCC--
droEug1 scf7180000409542:620325-620459 - G------------AATGT---------------------------CATTCAC--------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGC----TGTTTG----TGA-TTCTAAAT----TCCGTAGCACCACATGATTCGGCTTCGTGGAGCAGGACAG--------------CATC------------AGATTTTCTC-T----------------------------TTTAAA--------ACGACCCT--
dm3 chr3R:16561635-16561763 + dme-mir-995 Known_mirbase G------------AATGT---------------------------CATCCAC--------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT---------C--CGTAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTACAGGATAT--------------CATC------------GGTTTTT--GCTAGC----AAA-----------------C---------G----GGT-AATC--
droSim2 3r:4744569-4744707 - dsi-mir-995 Known_mirbase AAGCATAGGAAGAAATGT---------------------------CGTTCAC--------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT---------C--CAAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATAT--------------CATC------------GGTTTTT--GCTAGC----CAG-----------------C---------C----AG---TCC--
droSec2 scaffold_27:174248-174377 - dse_20 confident A------------AATGT---------------------------CGTTCAC--------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT---------C--CGAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATAT--------------CATC------------GGTTTTT--GCTAGC----CAG-----------------C---------G----GGTATCCA--
droYak3 3R:5351038-5351182 + dya_10 confident G------------T-TGCCA-----------TCCTGGATTAAACTCATTCAC--------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT---------C--TAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAT--------------CAGC------------AATTTTT--GGTAGC----CAA-----------------T---------C----GTTATCTA--
droEre2 scaffold_4770:5101882-5102011 - der_22 confident G------------AATGT---------------------------CATTCAC--------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----TGTTT---------T--CAGGA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAT--------------CAGC------------GGTTTTT--GCTAGA----CAA-----------------C---------G----GTTATCTA--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
G------------AATGTCAAATTTTCTGACTCCTGC----AACTCATGT------------------------AAGGCTTCACCAAGCAGCCCGGATTCTGCGAGTGCTGCGC----TACAA---------C--AAGAACTAAGACGTAGCACCACATGATTCGGCTTCATGGTGAAGTACATCGCAACGT------CATC------------GTGTTGA--A-GACT----TAA---------------------------T----CTTATCCA--SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................211202227.002022271763891330790086342997
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................2016359.006359449747966816501
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................2215641.005641410882743427236
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................2111899.001899181478043
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................2111240.001240121911163
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................2211082.001082743158715123
....................................................................................................................................................TAGCACCACATGATTCGGCTTC............................................................................................................2211063.00106383161911151
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................201690.0069020657166
.................................................................................................................C----TACAA---------C--AAGAACTAAGACG..................................................................................................................................201481.0048111337799
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................201441.004414410000
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................211440.00440307661588
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................221384.003843272031816
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................191311.003112252503130
..........................................................................................GCCCGGATTCTGCGAGTGCTGCG.....................................................................................................................................................................231234.00234017517141
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................231125.0012576332113
....................................................................................................................................................TAGCACCACATGATTCGGCG..............................................................................................................20199.0099990000
.......................................................................................................................................................CACCACATGATTCGGCTT.............................................................................................................18181.0081698022
..........................................................................................GCCCGGATTCTGCGAGTGCTG.......................................................................................................................................................................21149.00494142227
..........................................................................................GCCCGGATTCTGCGAGTGCTGC......................................................................................................................................................................22147.00470402221
....................................................................................................................................................TAGCACCACATGATTCGGCTGG............................................................................................................22146.0046460000
......................................................................................................................................................GCACCACATGATTCGGCTT.............................................................................................................19145.00451427130
....................................................................................................................................................TAGCACCACATGATTCGGCTTCT...........................................................................................................23142.0042314142
.....................................................................................................................................................AGCACCACATGATTCGGCTTT............................................................................................................21138.0038137000
....................................................................................................................................................TAGCACCACATGATTCGGCTTCA...........................................................................................................23138.0038740198
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................18137.00371110178
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................19128.0028027001
...................................................................................................................................................GTAGCACCACATGATTCGGCTT.............................................................................................................22125.0025222010
....................................................................................................................................................TAGCACCACATGATTCGGCGG.............................................................................................................21122.0022220000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTG...........................................................................................................23118.0018162000
....................................................................................................................................................TAGCACCACATGATTCGGCTGA............................................................................................................22115.0015141000
....................................................................................................................................................TAGCACCACATGATTCGGCTGT............................................................................................................22115.0015132000
........................................................................................................................................................ACCACATGATTCGGCTTT............................................................................................................18213.0026251000
....................................................................................................................................................TAGCACCACATGATTCGGCTTCC...........................................................................................................23113.001373201
...............................................TGT------------------------AAGGCTTCACCAAGCA............................................................................................................................................................................................19112.0012000120
....................................................................................................................................................TAGCACCACATGATTCGGCTTTC...........................................................................................................23111.001128001
....................................................................................................................................................TAGCACCACATGATTCGGCTTGT...........................................................................................................23111.001190011
....................................................................................................................................................TAGCACCACATGATTCGGCTTAT...........................................................................................................23110.001023140
.....................................................................................................................................................AGCACCACATGATTCGGCTTA............................................................................................................2119.00908010
......................................................................................................................TACAA---------C--AAGAACTAAGACG..................................................................................................................................1918.00801070
..........................................................................................GCCCGGATTCTGCGAGTGCTGCGT----................................................................................................................................................................2418.00800224
....................................................................................................................................................TAGCACCACATGATTCGGCTTCG...........................................................................................................2318.00861010
.........................................................................................AGCCCGGATTCTGCGAGTGCTGC......................................................................................................................................................................2317.00700043
....................................................................................................................................................TAGCACCACATGATTCGGCTTTCC..........................................................................................................2417.00713003
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................2017.00722030
.....................................................................................................................................................AGCACCACATGATTCGGCTG.............................................................................................................2016.00606000
....................................................................................................................................................TAGCACCACATGATTCGGCTGTT...........................................................................................................2316.00660000
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................2215.00523000
........................................................................................................................................................ACCACATGATTCGGCTTA............................................................................................................1815.00550000
....................................................................................................................................................TAGCACCACATGATTCGGAC..............................................................................................................2014.00440000
.....................................................................................................................................................AGCACCACATGATTCGGCTTC............................................................................................................2114.00404000
..........................................................................................GCCCGGATTCTGCGAGTGCT........................................................................................................................................................................2014.00411101
....................................................................................................................................................TAGCACCACATGATTCGGCCC.............................................................................................................2114.00440000
.........................................................................................AGCCCGGATTCTGCGAGTGCTGCG.....................................................................................................................................................................2414.00401030
.........................................................................................AGCCCGGATTCTGCGAGTGCTG.......................................................................................................................................................................2213.00321000
.......................................................................................................................................................CACCACATGATTCGGCTTT............................................................................................................1913.00311001
....................................................................................................................................................TAGCACCACATGATTCGGCTTCCC..........................................................................................................2413.00303000
..........................................................................................GCCCGGATTCTGCGAGTGCTGT......................................................................................................................................................................2212.00200002
........................................................................................CAGCCCGGATTCTGCGAGTGCTG.......................................................................................................................................................................2312.00210010
.........................................................................................................................................................................CATGGTGAAGTACATCGC...........................................................................................1812.00200020
....................................................................................................................................................TAGCACCACATGATTCGTT...............................................................................................................1912.00201001
.............................................................................................................................................TAAGACGTAGCACCACATGATTCGGCT..............................................................................................................2712.00211000
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................2212.00210010
....................................................................................................................................................TAGCACCACATGATTCGGCTTAG...........................................................................................................2312.00211000
.........................................................................................AGCCCGGATTCTGCGAGTGCT........................................................................................................................................................................2112.00200110
.................................................................................................................C----TACAA---------C--AAGAACTAAGAC...................................................................................................................................1912.00200020
............................................................................................................................................CTAAGACGTAGCACCACATGATTC..................................................................................................................2412.00200110
...........................................................................................CCCGGATTCTGCGAGTGCTGCG.....................................................................................................................................................................2212.00202000
.............................................................................................................................................TAAGACGTAGCACCACATGATTCGGC...............................................................................................................2612.00202000
.....................................................................................................................................................AGCACCACATGATTCGGCTTCA...........................................................................................................2212.00200011
.........................................................................................AGCCCGGATTCTGCGAGTGC.........................................................................................................................................................................2011.00100010
..........................................................................................GCCCGGATTCTGCGAGTGCTGG......................................................................................................................................................................2211.00110000
..........................................................................................GCCCGGATTCTGCGAGTGC.........................................................................................................................................................................1911.00100010
droVir3
G------------AATGT---------------------------CAAACGGCTTGGCCGGCTCAACA---------GCTGTACAACGAAGCCCGGATACTGTGTGTGTTGCGC----TGTTT------------AGAGG----TACGTAGCACCACATGATTCGGCTTCGTGGTGCACGCA------ACTGCAACAGA--G---GGCGTCAACGGTATTT--ATT-------------------------------AATAT--------AGGCTA--SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................211460912.00460912628428197159401743875799909359636599422432612275473662751443613911662629382119014165104228709126271223543173262179946771018816151163312756991298741185519058491868144314149911787145815183112196335083468219922261828927710906259510182041678203531416818083141906580196841852712869147401852420185656552335554995510032
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................22129088.00290883871151128618464179232451911315874372492662684226312288738750552854687683766399119763621477882081775291924534575651395241447353115109847460322230777112243127243110951053604626629477475620639515301338674714
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................20121100.00211002339706257472917628041566721169528420212299139675390319421417404352183515412217540565566434683209681611649888128109117187102244179110115895547681756822866078898985930925827317616931322133855666610061008
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................22113944.00139448413025132513716134212461262217243955813931840128341536096914613946437540578651568469375714612190598873601265511510062605041236023136094105674586188581516323439464614180151155334349
..........................................................................................GCCCGGATACTGTGTGTGTTGC......................................................................................................................................................................2216041.006041101312531851157422700000014029851215117633374110651111101231100010110155508727530842526251913312229091292911861280
....................................................................................................................................................TAGCACCACATGATTCGGCTTC............................................................................................................2215507.0055074242625623712615510603412402201915825720238545249463356173505133189118171583812021220034455411153111276016183916114861625810698121281226
..........................................................................................GCCCGGATACTGTGTGTGTTG.......................................................................................................................................................................2113749.0037490039611171644420237258100110140214211856242534154017835193334141000010200100000000004560415246266328422924282024305365361489528
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................2213607.0036074146124411821144400300000001201332419402138441660246223933304281141153054151123645003116111012815611137367295329260357413224451113101
....................................................................................................................................................TAGCACCACATGATTCGGCTTAA...........................................................................................................2313409.00340911711312311240000423400100050043130731316155421543126132305198841218411223437232000105000714135733676516425322945807267109129
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................2113147.00314734191488518327512011060000001400591324914136132262710531051122409020491923281614121117311521187711021780107311898927126108108129105102445213922
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................2112731.0027313533264511342018160000000000000830228910105645132723286575312635123443323333410341630022624162230111322401313151417
....................................................................................................................................................TAGCACCACATGATTCGGCTTAAA..........................................................................................................2412359.0023591011820120200000620000000002212335160250001900731252601049100210010120201000001200094472952304612196813123055398090
..........................................................................................GCCCGGATACTGTGTGTGTTGCAA----................................................................................................................................................................2411768.00176800110000100100000000000000120000303100210020000000000000000000000014012911428425690280270326364
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................2311633.0016331444541761062302026041341223452020143524861197423524272631402641300010322111153111001106409195563211198119182215173826
..........................................................................................GCCCGGATACTGTGTGTGTTGCG.....................................................................................................................................................................2311434.001434112021122123105100000000050241071471215921110351011251816201428814943510051330410253216014479851071882989793430
....................................................................................................................................................TAGCACCACATGATTCGGCTTTA...........................................................................................................2311416.00141631193361766000012300000040034252030212427115133734336339318475354628411187470011461004146486502842332040393726255275
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................2111182.00118221835125256010120000010000801880103222118000205630747730997764129331000413717333937212060245112730
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................1911177.001177253328281402000002010232122011211419242186253022924232083433603335464143110434405643939187662604563511520213859
..........................................................................................GCCCGGATACTGTGTGTGTTGCA.....................................................................................................................................................................2311167.0011670000000000003010000000000011000100000000000000000000000000000100070633900000132250227234243
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................2011069.001069059052350400000210000001004327710031058456100000000010000010002110711200922511501014
..............................................................TCAACA---------GCTGTACAACGAA............................................................................................................................................................................................191520.0052000101240000022000100400523592102810405600000000000000000000400000404053283527123732424104541
....................................................................................................................................................TAGCACCACATGATTCGGCTTTAA..........................................................................................................241414.0041410451440000000000000001004241019413551201022191315100000000000200000002000344445147141408851317
..........................................................................................GCCCGGATACTGTGTGTGTTGCAA----A...............................................................................................................................................................251385.00385000000000000310000000000000000001011010000000000000000000000000003335273000101946577581
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................201385.0038510911020000000000000100210420101111119685001100010000100000011000003034150110001544465561
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................201333.00333331465109100000000000000010001000220400000031010000010000101000000000072000012520110
....................................................................................................................................................TAGCACCACATGATTCGGCTTCC...........................................................................................................231268.0026837033114150000000000000230072112221372102300006210000000000000000010002050000110261000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAT...........................................................................................................231256.00256009730100000100000003005557411115301168918616700000000101010100012120901013330142311044
....................................................................................................................................................TAGCACCACATGATTCGGCTTCA...........................................................................................................231246.0024620143204000000010000050080013101161251021016141340000000000010000000400042813120010004151268
....................................................................................................................................................TAGCACCACATGATTCGGCTTCT...........................................................................................................231243.00243130714300000000000000220040132303214470201020411000000000000000001000500050000001500311
....................................................................................................................................................TAGCACCACATGATTCGGCTTTC...........................................................................................................231241.002418016151100000000000000100085165181910362601121112000000000000000000010400044222224722036
....................................................................................................................................................TAGCACCACATGATTCGGCAA.............................................................................................................211211.0021100106000000000000000000022141000010325550100000000000000000000000023257000000425212929
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................181196.001960030104100100000000030158710851046100128118111000000000000000000001006171142000000111410
..........................................................................................GCCCGGATACTGTGTGTGTT........................................................................................................................................................................201153.001530022000012010100000000010001011010120100000000000000000000030000091013100010717162533
.......................................................................................................................................................CACCACATGATTCGGCTT.............................................................................................................181150.00150610101102010000100000010042104110010232010000001000000100130202000143115149482140010
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................221148.0014810215200000001000000000041028100035179225100000000000000000000000106318303000103200
....................................................................................................................................................TAGCACCACATGATTCGGCTAAA...........................................................................................................231145.0014500241100000001000000000064210100002034332300000000000000000000000004084100000100012
........................................................................................................................................................ACCACATGATTCGGCTT.............................................................................................................171133.001330000000000000000000000000000000000000000000000002010000320000000118111700000041131221
......................................................................................................................................................GCACCACATGATTCGGCTT.............................................................................................................191126.0012603435302000001000000000123044110043222460000000000000000110011001200024435101021
..........................................................................................................................................................CACATGATTCGGCTT.............................................................................................................151124.0012400000000000000000000000000000000000000001753057818611813215461400000000000000000000
.........................................................................................................................................................CCACATGATTCGGCTT.............................................................................................................161108.0010800000000000000000000000000000000000000007106414421441555205231500000000000000000000
..........................................................................................GCCCGGATACTGTGTGTGTTGA......................................................................................................................................................................221107.0010700000000010010000000000101000000000020000000000000000000000000000813711100159102421
..........................................................................................GCCCGGATACTGTGTGTGT.........................................................................................................................................................................191104.00104000000001000000000000000010000000000100000000000000000000000000009614131123128121217
..........................................................................................GCCCGGATACTGTGTGTGTTGAAA----................................................................................................................................................................24192.009200000000000000000000000010000000000010000000000000000000000000000414624201481561410
....................................................................................................................................................TAGCACCACATGATTCGGCTCT............................................................................................................22191.009112022031002000000000060010110312416010030210000001000000000000001000100000011001102
.............................................................CTCAACA---------GCTGTACAACGAA............................................................................................................................................................................................20189.0089000110100000020000000000000100005003022000000000000000000000000001681627835121011
........................................................................................................................................................ACCACATGATTCGGCTTT............................................................................................................18188.0088230020500000001000000003201100011021200100000000000000000000000012037661291120001
.....................................................................................................................................................AGCACCACATGATTCGGCTTT............................................................................................................21186.008600735000000000000000000000000000020100001000000000000000000000000001100000000011
....................................................................................................................................................TAGCACCACATGATTCGGCG..............................................................................................................20178.0078153800000000000000000000000000000000000000001010010002241011101000022001010200100
....................................................................................................................................................TAGCACCACATGATTCGGCTTGT...........................................................................................................23172.00723063013000000000000010011010133621122030000000000000000000000000182242021011013
..........................................................................................GCCCGGATACTGTGTGTGTTGCGC----TG..............................................................................................................................................................26169.006910000000000000000000000000010000000000000000000000000000000000001000101660181600000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTAG..........................................................................................................24165.0065002110000000000000000000100013111001003000000000000000000000010001014500010031158
..........................................................................................GCCCGGATACTGTGTGTGTTGT......................................................................................................................................................................22163.0063000000000001220000001000100001000000111000000000000000000000000003531002101381411
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................22159.00591081001000001000000010011231351530111490000000001000000000000000300000000010000
....................................................................................................................................................TAGCACCACATGATTCGGCTTCG...........................................................................................................23158.00587101000000000000000030011010101102001010010000000001000000100100042047142501020
..........................................................................................GCCCGGATACTGTGTGTGTTA.......................................................................................................................................................................21157.00570000000000000100000000000001000000101000000000000000000000000000076700000038877
........................................................................................................................................................ACCACATGATTCGGCTTA............................................................................................................18152.00521000100000000000000000000010000110110030000000000000000000000000002063636840022
....................................................................................................................................................TAGCACCACATGATTCGGCTTTTA..........................................................................................................24145.00450021000000000000000000001020603410110001000000000000010000000000063000000003315
....................................................................................................................................................TAGCACCACATGATTCGGCTTTTC..........................................................................................................24145.00451022111000000000000040010020542803010002000000010000000000000000000100011001000
...................................................................................................................................................GTAGCACCACATGATTCGGCTT.............................................................................................................22144.004400240000000000000000000000001000000010000000000010011100100000000000000000003181
....................................................................................................................................................TAGCACCACATGATTCGGCTTTCC..........................................................................................................24143.004310100000000000000000000011000563804000000000000000000000000000100100000200000000
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................19140.004000282100100000000000000001100000010100100000000000000000000000000200000010000000
..........................................................................................GCCCGGATACTGTGTGTGTTGAA.....................................................................................................................................................................23139.00390000000000000000000000000000000000000000000000000000000000010000034612000064255
....................................................................................................................................................TAGCACCACATGATTCGGCTTTTG..........................................................................................................24132.00320030000000000000000010010000242300000100000000000000000000000000030230201002011
....................................................................................................................................................TAGCACCACATGATTCGGCTTCAA..........................................................................................................24131.00310020000000011000000000030000000010002300000000000000000000000000073000020011022
....................................................................................................................................................TAGCACCACATGATTCGGCTTGA...........................................................................................................23131.00312232000000000000000010011000000000000100000000000000000000000000004201000012152
....................................................................................................................................................TAGCACCACATGATTCGGCTGG............................................................................................................22130.003062100000000001000000000000000000000000000000000000000000000001000000001000000000
..........................................................................................GCCCGGATACTGTGTGTGTTT.......................................................................................................................................................................21128.00280000100011011100000000010101000000200000000000000000000000000000023400000011033
....................................................................................................................................................TAGCACCACATGATTCGGCTTACA..........................................................................................................24127.00270000001000000000000000010101000000058520010000000000000000000000001000000001000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAAC..........................................................................................................24127.00270011000000000000000000000000000010010000000000000000000000000000066300000010124
....................................................................................................................................................TAGCACCACATGATTCGGCTTTCA..........................................................................................................24126.00260022100000001000000000030002010000111001000000000000000000000000003000010001041
..........................................................................................GCCCGGATACTGTGTGTGTTAAA.....................................................................................................................................................................23126.00260000000000000000000000000000000000001000000000000000000000000000045200000002057
....................................................................................................................................................TAGCACCACATGATTCGGCTTAAG..........................................................................................................24126.00260010000000000000000000021010000010102000000000000000000000000000023022001322000
..........................................................................................GCCCGGATACTGTGTGTGTTGCAT----................................................................................................................................................................24126.00260000000000000000000000000000000000000000000000000000000000000000001100000054546
..........................................................................................GCCCGGATACTGTGTGTG..........................................................................................................................................................................18125.00250001000100000000000000100000020100000010000000000000000000000000000120502012023
....................................................................................................................................................TAGCACCACATGATTCGGCTGT............................................................................................................22124.00241301100001000000000110000000111001110011001000000000000000001000020000001010001
..........................................................................................GCCCGGATACTGTGTGTGTTAA......................................................................................................................................................................22124.00240000000000000000000000000000000000000000000000000000000000000000003600000053043
....................................................................................................................................................TAGCACCACATGATTCGGAA..............................................................................................................20122.00220000000000000000000000000000000000000000000000000000000000000000033300000002074
....................................................................................................................................................TAGCACCACATGATTCGGCTTAC...........................................................................................................23122.00220012101000000000000000010021100110101020000000000000001001000000011000000100001
.....................................................................................................................................................AGCACCACATGATTCGGCTTA............................................................................................................21122.002201122001000000000000000000010000020000000000000000000000000000002000000000001000
..........................................................................................GCCCGGATACTGTGTGTGTTGCAG----................................................................................................................................................................24120.00200000000000000000000000000000000000000000000000000000000000000000002000000003627
.....................................................................................................................................................AGCACCACATGATTCGGCTTC............................................................................................................21119.001900161000000000000000000000000000000000010000000000000000000000001000000000000000
.............................................................................................CGGATACTGTGTGTGTTGCG.....................................................................................................................................................................20118.00180000000000000000000000000000010000000000000000000110000000000000000050043300000
....................................................................................................................................................TAGCACCACATGATTCGGAAA.............................................................................................................21117.00170000000000000000000000000000000000001000000000000000000000000000023000000003143
.........................................................................................................................................................CCACATGATTCGGCTTA............................................................................................................17116.00160000000000000000000000000000000000000000000100000000000000000000011400000022131
....................................................................................................................................................TAGCACCACATGATTCGGCTTCTC..........................................................................................................24116.00165010110000000000000000000100000201000000000000000000000000000000000000201000001
....................................................................................................................................................TAGCACCACATGATTCGGCTTGAA..........................................................................................................24116.00160000000000001000000000000010000100000110000000000000000000000000032100000001031
....................................................................................................................................................TAGCACCACATGATTCGGCTCA............................................................................................................22116.00160001200000000000000000001000001200022100000000000000000000000000020000000000110
....................................................................................................................................................TAGCACCACATGATTCGGCTTATA..........................................................................................................24115.00150010000000000000000000010010110000023110000000000000000000000000020000000001000
..........................................................................................GCCCGGATACTGTGTGTGTTGCT.....................................................................................................................................................................23115.00150002000000000000000000000000000000000000000000000000000000000000012200000001322
...........................................................................................CCCGGATACTGTGTGTGTTGC......................................................................................................................................................................21114.00140020000000000000000000000000000000000000000000000000000000000000000210102000132
....................................................................................................................................................TAGCACCACATGATTCGGA...............................................................................................................19114.00140000000010000000000000010000000000000100000000000000000000000100031000000011013
....................................................................................................................................................TAGCACCACATGATTCGGCCC.............................................................................................................21114.00143004000000000000000020000000000000000000000000000000000000000000000000003010001
..........................................................................................GCCCGGATACTGTGTGTGTTGCC.....................................................................................................................................................................23113.00130000000000000000000020000010110001000000000000000000000000000000001000000102120
........................................................................................................................................................ACCACATGATTCGGCTTC............................................................................................................18113.00134000100000000000000000000000000100000000000000000000000000000000000000103300000
.........................................................................................................................................................CCACATGATTCGGCTTT............................................................................................................17113.00130000000000000000000000000000000000000000012101000011010100000000000100000010011
.........................................................................................................................................................CCACATGATTCGGCT..............................................................................................................15112.00120000000000000000000000000000000000000000002001101140001001000000000000000000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGA............................................................................................................22112.00121300000000000000000000010000001000100010000000000000000000000000010100100000001
...............................................................CAACA---------GCTGTACAACGAA............................................................................................................................................................................................18112.00120000000000000000000000020000000000000000000000000000000000000000000012030300010
...........................................................................................CCCGGATACTGTGTGTGTTGCG.....................................................................................................................................................................22112.00120020000000000000000000000000000000000000000000000000000000000000000021110500000
....................................................................................................................................................TAGCACCACATGATTCGGCAAA............................................................................................................22111.00110000000000000000000000001010000000001000000000000000001000000000003000000003100
....................................................................................................................................................TAGCACCACATGATTCGGCAC.............................................................................................................21110.00100001000000000000000000000000000000000000000000000000000000000000011000000001231
droMoj3
G------------AATGT---------------------------CAAACAGCTTGGCTGGCTTGGTA---------GCTGAACTACGAAGCCCGGGTTTTGTGTGTGCCGCGC----TGTTT---------T----GAG----TACGTAGCACCACATGATTCGGCTTGGTAGTACAGGCT------CATTCAACAAATTA---GGCATC---AATTTTA-TA-G----------------------------ATTAAT---A----CGTGCCAA--SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................211338328.00338328405772388362943432860321359
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................21116664.0016664204911166173
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................22115042.001504219881253504351209252
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................2018620.0086209411354215136494116
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................2213762.003762745364452286916
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................2012700.00270020631326301
....................................................................................................................................................TAGCACCACATGATTCGGCTTC............................................................................................................2211980.00198030172026158442
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................2211419.00141925745506110015
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................2011134.001134010011330
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................211995.0099512961398641
....................................................................................................................................................TAGCACCACATGATTCGGCTTAA...........................................................................................................231933.0093339213045222
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................211789.007893088734612
....................................................................................................................................................TAGCACCACATGATTCGGCTTAAA..........................................................................................................241577.00577473300974
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................231538.00538801117214063
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................191309.0030958818122103
....................................................................................................................................................TAGCACCACATGATTCGGCTTTA...........................................................................................................231233.00233434111831
..........................................................................................GCCCGGGTTTTGTGTGTGCCGCG.....................................................................................................................................................................231180.001808303937633
.....................................................................................................................................................AGCACCACATGATTCGGCTTT............................................................................................................211138.00138105000330
..........................................................................................GCCCGGGTTTTGTGTGTGCCG.......................................................................................................................................................................211131.00131122531321912
......................................................................................................................................................GCACCACATGATTCGGCTT.............................................................................................................191129.0012963011613
....................................................................................................................................................TAGCACCACATGATTCGGCTTTAA..........................................................................................................24174.007450000240
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................22168.006836101282
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................19161.006151000100
.....................................................................................................................................................AGCACCACATGATTCGGCTTA............................................................................................................21159.005947000120
...................................................................................................................................................GTAGCACCACATGATTCGGCTT.............................................................................................................22157.00575400030
....................................................................................................................................................TAGCACCACATGATTCGGCTTTC...........................................................................................................23154.00549010440
....................................................................................................................................................TAGCACCACATGATTCGGCTTAT...........................................................................................................23154.005417011341
.....................................................................................................................................................AGCACCACATGATTCGGCTC.............................................................................................................20152.00522000500
..........................................................................................GCCCGGGTTTTGTGTGTGCCGC......................................................................................................................................................................22144.00444860233
....................................................................................................................................................TAGCACCACATGATTCGGCTGT............................................................................................................22141.00410141332
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................18137.003712412441
.......................................................................................................................................................CACCACATGATTCGGCTT.............................................................................................................18133.003314001171
....................................................................................................................................................TAGCACCACATGATTCGGCCC.............................................................................................................21132.00320000320
.....................................................................................................................................................AGCACCACATGATTCGGCTTAAA..........................................................................................................23128.00282800000
....................................................................................................................................................TAGCACCACATGATTCGGCTTGT...........................................................................................................23126.00264211180
....................................................................................................................................................TAGCACCACATGATTCGGCTAAA...........................................................................................................23125.00251600072
.....................................................................................................................................................AGCACCACATGATTCGGCTTAA...........................................................................................................22124.00242300010
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................20124.00246102123
....................................................................................................................................................TAGCACCACATGATTCGGCTTGG...........................................................................................................23123.00237000160
....................................................................................................................................................TAGCACCACATGATTCGGCAA.............................................................................................................21122.00229000130
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................22120.00207000130
.....................................................................................................................................................AGCACCACATGATTCGGCTA.............................................................................................................20119.00191900000
.....................................................................................................................................................AGCACCACATGATTCGGCTTC............................................................................................................21119.00191600030
..........................................................................................GCCCGGGTTTTGTGTGTGCC........................................................................................................................................................................20118.0018125262
....................................................................................................................................................TAGCACCACATGATTCGGCTTCT...........................................................................................................23118.00181200150
....................................................................................................................................................TAGCACCACATGATTCGGCTTAC...........................................................................................................23115.0015600090
....................................................................................................................................................TAGCACCACATGATTCGGCTTCA...........................................................................................................23114.0014900032
.....................................................................................................................................................AGCACCACATGATTCGGCTTG............................................................................................................21113.00131000030
....................................................................................................................................................TAGCACCACATGATTCGGCTTGA...........................................................................................................23112.0012401070
....................................................................................................................................................TAGCACCACATGATTCGGCTGC............................................................................................................22112.00120000120
....................................................................................................................................................TAGCACCACATGATTCGGCTGA............................................................................................................22111.0011111170
....................................................................................................................................................TAGCACCACATGATTCGGCAC.............................................................................................................21110.00100000100
......................................................................................................................................................GCACCACATGATTCGGCTC.............................................................................................................19110.00100000100
......................................................................................................................................................GCACCACATGATTCGGCTTT............................................................................................................2019.009500040
droGri2
G------------AATGT---------------------------CAAATG---------------------------CTGTACAGTGAAGCCCGGATTCTGTGTGTGCTGCGTTTGCTGATTTGCCATACACATAAATA----TACGTAGCACCACATGATTCGGCTTCGTGGTGCTAGCA------ACTC------CATC------------GCCAGT-----------------TAG-----ATAGATAA-ATCAAT---C----AAGATATC--SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................2112162.0021621466696
....................................................................................................................................................TAGCACCACATGATTCGGCTTC............................................................................................................221229.00229127102
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................221211.0021117338
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................201141.0014110239
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................20190.0090900
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................19121.0021192
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................21116.0016151
....................................................................................................................................................TAGCACCACATGATTCGGCTTCT...........................................................................................................23116.001697
..........................................................................................GCCCGGATTCTGTGTGTGCTGCG.....................................................................................................................................................................23115.0015114
....................................................................................................................................................TAGCACCACATGATTCGGCTTCA...........................................................................................................23113.001358
.....................................................................................................................................................AGCACCACATGATTCGGCTTT............................................................................................................21113.0013130
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................18111.0011110
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................23111.0011110
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................2216.00633
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................1915.00550
.....................................................................................................................................................AGCACCACATGATTCGGCTTC............................................................................................................2115.00550
....................................................................................................................................................TAGCACCACATGATTCGGCTTCC...........................................................................................................2314.00422
......................................................................................................................................................GCACCACATGATTCGGCTT.............................................................................................................1914.00431
..........................................................................................GCCCGGATTCTGTGTGTGCTG.......................................................................................................................................................................2114.00431
.........................................................................................AGCCCGGATTCTGTGTGTGCT........................................................................................................................................................................2113.00321
.................................................................................................................TTTGCTGATTTGCCATACACAT...............................................................................................................................................2213.00330
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................2113.00330
..........................................................................................GCCCGGATTCTGTGTGTGCTGCGT....................................................................................................................................................................2412.00220
..........................................................................................GCCCGGATTCTGTGTGTGCTGC......................................................................................................................................................................2212.00211
.........................................................................................AGCCCGGATTCTGTGTGTGCTGCG.....................................................................................................................................................................2412.00211
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................2212.00220
...................................................................................................................................................GTAGCACCACATGATTCGGCT..............................................................................................................2111.00110
............................................................................................CCGGATTCTGTGTGTGCTGCG.....................................................................................................................................................................2111.00110
..................................................................................................................TTGCTGATTTGCCATACACAT...............................................................................................................................................2111.00110
.....................................................................................................................................................AGCACCACATGATTCGGCTTCC...........................................................................................................2211.00110
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................2011.00101
.....................................................................................................................................................AGCACCACATGATTCGGCTTG............................................................................................................2111.00110
.................................................................................................................TTTGCTGATTTGCCATACAC.................................................................................................................................................2011.00110
.....................................................................................................................................................AGCACCACATGATTCGGC...............................................................................................................1811.00110
.........................................................................................AGCCCGGATTCTGTGTGTGCTGC......................................................................................................................................................................2311.00101
.....................................................................................................................................................AGCACCACATGATTCGGCTG.............................................................................................................2011.00110
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................2111.00101
...........................................................................................CCCGGATTCTGTGTGTGCTGC......................................................................................................................................................................2111.00110
....................................................................................................................................................TAGCACCACATGATTCGGCTTCG...........................................................................................................2311.00110
...........................................................................................CCCGGATTCTGTGTGTGCTG.......................................................................................................................................................................2011.00110
.....................................................................................................................................................AGCACCACATGATTCGGCTTA............................................................................................................2111.00110
.................................................................................................................TTTGCTGATTTGCCATACACATAAATA----T.....................................................................................................................................2811.00110
.........................................................................................AGCCCGGATTCTGTGTGTGCTG.......................................................................................................................................................................2211.00101
.....................................................................................................................................................AGCACCACATGATTCGGCTTTT...........................................................................................................2211.00110
...................................................................................................................................................GTAGCACCACATGATTCGGCTT.............................................................................................................2211.00110
dp5
G------------AATGT---------------------------CAAACACCTC-GCAGGCTCTGCAGCAGACCCTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGC----TGTGT---------TCTTAAAA----GCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACAC--------------CTTC------------AGTATC---------CAAGTCGC------------ATTC-ATTAATACT-GACATGTATACA--SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................211124101.0012410154078973786496774780340031115277123213
....................................................................................................................................................TAGCACCACATGATTCGGCTGT............................................................................................................2216796.00679685522425137594376283553320
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................2016695.00669544492555048316932616217514
.....................................................................................................................................................AGCACCACATGATTCGGCTG.............................................................................................................2015429.0054291541165420000
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................2112052.002052261102679107753719520
....................................................................................................................................................TAGCACCACATGATTCGGCTGA............................................................................................................221546.0054615405323314317720
..........................................................................................GCCCGGATTCTGTGTGTGCTG.......................................................................................................................................................................211528.00528345751168184151
..........................................................................................GCCCGGATTCTGTGTGTGCTGCG.....................................................................................................................................................................231526.005261251771096319131028
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................211519.0051984393871863000
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................191518.005181421914498141202114
....................................................................................................................................................TAGCACCACATGATTCGGCTGC............................................................................................................221464.00464131889410445180200
....................................................................................................................................................TAGCACCACATGATTCGGCTGTT...........................................................................................................231400.00400183216182720170
.....................................................................................................................................................AGCACCACATGATTCGGCTGT............................................................................................................211365.00365036201000011
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................191274.00274027301000000
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................201199.001992110293010000
......................................................................................................................................................GCACCACATGATTCGGCTG.............................................................................................................191198.00198119500110000
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................211184.0018431512722962000
..........................................................................................GCCCGGATTCTGTGTGTGCTGC......................................................................................................................................................................221165.00165110616111333426
....................................................................................................................................................TAGCACCACATGATTCGGCTGG............................................................................................................221154.0015420782129210210
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................221127.001271763111251000
...................................................................................................................................................GTAGCACCACATGATTCGGCTG.............................................................................................................221122.00122012200000000
..........................................................................................GCCCGGATTCTGTGTGTGCT........................................................................................................................................................................20186.008617310541010
....................................................................................................................................................TAGCACCACATGATTCGGCTGTAA..........................................................................................................24178.007807331010000
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................18177.007703311101415021
....................................................................................................................................................TAGCACCACATGATTCGGCTGTA...........................................................................................................23159.005934353001400
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................20157.005704921300200
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................20157.005705601000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGAA...........................................................................................................23150.005013583000300
.......................................................................................................................................................CACCACATGATTCGGCTG.............................................................................................................18149.004903200476000
....................................................................................................................................................TAGCACCACATGATTCGGCAA.............................................................................................................21138.003813430000000
...........................................................................................CCCGGATTCTGTGTGTGCTG.......................................................................................................................................................................20138.003803800000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGAAA..........................................................................................................24136.003613220100000
....................................................................................................................................................TAGCACCACATGATTCGGCTGTC...........................................................................................................23130.00306715035030
.....................................................................................................................................................AGCACCACATGATTCGGCTA.............................................................................................................20128.002802800000000
.....................................................................................................................................................AGCACCACATGATTCGGCTGTT...........................................................................................................22126.002602600000000
.....................................................................................................................................................AGCACCACATGATTCGGCTGA............................................................................................................21125.002502401000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................22124.002401461101001
...........................................................................................CCCGGATTCTGTGTGTGCTGCG.....................................................................................................................................................................22122.002201900010002
..........................................................................................GCCCGGATTCTGTGTGTGCTA.......................................................................................................................................................................21118.001801710000000
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................22116.001601330000000
..........................................................................................GCCCGGATTCTGTGTGTGC.........................................................................................................................................................................19116.001601021020010
..........................................................................................GCCCGGATTCTGTGTGTGCTGT......................................................................................................................................................................22115.001501110002010
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................23114.00140922010000
.....................................................................................................................................................AGCACCACATGATTCGGCTGC............................................................................................................21113.001301300000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGTTA..........................................................................................................24112.00121830000000
......................................................................................................................................................GCACCACATGATTCGGCTGT............................................................................................................20112.001201110000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGTCC..........................................................................................................2419.0095002011000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAA...........................................................................................................2319.0090440100000
...........................................................................................CCCGGATTCTGTGTGTGCTGC......................................................................................................................................................................2119.0090900000000
...................................................................................................................................................GTAGCACCACATGATTCGGCT..............................................................................................................2118.0080800000000
....................................................................................................................................................TAGCACCACATGATTCGGCTAAA...........................................................................................................2318.0080700001000
....................................................................................................................................................TAGCACCACATGATTCGGCTGGT...........................................................................................................2318.0080000240200
....................................................................................................................................................TAGCACCACATGATTCGGT...............................................................................................................1917.0070700000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGCA...........................................................................................................2317.0070110311000
....................................................................................................................................................TAGCACCACATGATTCGGCTGCT...........................................................................................................2317.0070000511000
.....................................................................................................................................................AGCACCACATGATTCGGCTAA............................................................................................................2117.0070700000000
...........................................................................................CCCGGATTCTGTGTGTGCT........................................................................................................................................................................1917.0070700000000
.....................................................................................................................................................AGCACCACATGATTCGGCTTT............................................................................................................2116.0060600000000
...................................................................................................................................................GTAGCACCACATGATTCGGCTGT............................................................................................................2316.0060600000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................2215.0050410000000
..........................................................................................GCCCGGATTCTGTGTGTGCTGCGC----................................................................................................................................................................2415.0050400000010
..........................................................................................GCCCGGATTCTGTGTGTGCTT.......................................................................................................................................................................2115.0050400010000
..........................................................................................GCCCGGATTCTGTGTGTGCTGA......................................................................................................................................................................2215.0050210000110
..........................................................................................GCCCGGATTCTGTGTGTGCTGCGT----................................................................................................................................................................2414.0040400000000
.....................................................................................................................................................AGCACCACATGATTCGGC...............................................................................................................1814.0040400000000
.....................................................................................................................................................AGCACCACATGATTCGGCTGAA...........................................................................................................2214.0040400000000
..........................................................................................GCCCGGATTCTGTGTGTGCTGCC.....................................................................................................................................................................2314.0040030010000
.....................................................................................................................................................AGCACCACATGATTCGGCAA.............................................................................................................2014.0040400000000
.......................................................................................................................................................CACCACATGATTCGGCTGT............................................................................................................1914.0040400000000
......................................................................................................................................................GCACCACATGATTCGGCT..............................................................................................................1814.0040400000000
....................................................................................................................................................TAGCACCACATGATTCGGCAC.............................................................................................................2114.0040220000000
.....................................................................................................................................................AGCACCACATGATTCGGCTGG............................................................................................................2114.0040400000000
.....................................................................................................................................................AGCACCACATGATTCGGCTGTA...........................................................................................................2223.5070700000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGGC...........................................................................................................2313.0030200010000
........................................................................................................................................................ACCACATGATTCGGCTGT............................................................................................................1813.0031200000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGCTG..........................................................................................................2413.0030100020000
.....................................................................................................................................................AGCACCACATGATTCGGCA..............................................................................................................1913.0030300000000
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................2213.0030210000000
....................................................................................................................................................TAGCACCACATGATTCGGCGT.............................................................................................................2113.0030110100000
....................................................................................................................................................TAGCACCACATGATTCGGAC..............................................................................................................2013.0030021000000
....................................................................................................................................................TAGCACCACATGATTCGGCG..............................................................................................................2013.0031010100000
....................................................................................................................................................TAGCACCACATGATTCGGCTGAT...........................................................................................................2313.0030101100000
....................................................................................................................................................TAGCACCACATGATTCGGCCT.............................................................................................................2113.0030111000000
....................................................................................................................................................TAGCACCACATGATTCGGTA..............................................................................................................2013.0030200100000
....................................................................................................................................................TAGCACCACATGATTCGGCTGCC...........................................................................................................2312.0020100010000
..........................................................................................GCCCGGATTCTGTGTGTGCTAAA.....................................................................................................................................................................2312.0020200000000
droPer2
G------------AATGT---------------------------CAAACACCTC-GCAGGCTCTGCAGCAGACCCTGCTGCACAACGCAGCCCGGATTCTGTGTGTGCTGCGC----TGTGT---------TCTTAAAA----GCCGTAGCACCACATGATTCGGCTGCGTGGTCAGCCACAC--------------CTTC------------AGTATC---------CAAGTCGC------------ATTC-ATTAATACT-GAC-ATTATGTA--SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................211118009.001180099513513758254527313631209
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................2012555.00255574176110022768046
....................................................................................................................................................TAGCACCACATGATTCGGCTGT............................................................................................................2212290.0022906235423125180340
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................211959.0095972110863144112
.....................................................................................................................................................AGCACCACATGATTCGGCTG.............................................................................................................201803.00803177742325
....................................................................................................................................................TAGCACCACATGATTCGGCTGA............................................................................................................221669.0066936011510451354
....................................................................................................................................................TAGCACCACATGATTCGGCTGG............................................................................................................221377.00377302101212410
....................................................................................................................................................TAGCACCACATGATTCGGCTGC............................................................................................................221354.0035421853910640
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................211331.003311721458330
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................191303.003032532576120
..........................................................................................GCCCGGATTCTGTGTGTGCTG.......................................................................................................................................................................211152.001521538051480
..........................................................................................GCCCGGATTCTGTGTGTGCTGCG.....................................................................................................................................................................231100.0010017819161822
....................................................................................................................................................TAGCACCACATGATTCGGCTGTT...........................................................................................................23185.0085372402157
.......................................................................................................................................................CACCACATGATTCGGCTG.............................................................................................................18184.00846580371
......................................................................................................................................................GCACCACATGATTCGGCTG.............................................................................................................19175.007546244100
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................20161.00615900011
....................................................................................................................................................TAGCACCACATGATTCGGCTGAA...........................................................................................................23155.00554291030
....................................................................................................................................................TAGCACCACATGATTCGGCTGTA...........................................................................................................23150.00503460370
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................21143.004324421120
.....................................................................................................................................................AGCACCACATGATTCGGCTGT............................................................................................................21143.00430430000
....................................................................................................................................................TAGCACCACATGATTCGGCTGAAA..........................................................................................................24141.00413280001
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................19141.00410390020
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................18134.003414214112
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................22132.00322161121
....................................................................................................................................................TAGCACCACATGATTCGGCG..............................................................................................................20126.00262400020
....................................................................................................................................................TAGCACCACATGATTCGGCTGGT...........................................................................................................23125.00251115170
....................................................................................................................................................TAGCACCACATGATTCGGCTGTAA..........................................................................................................24123.00231670000
..........................................................................................GCCCGGATTCTGTGTGTGCTGC......................................................................................................................................................................22122.0022342238
...................................................................................................................................................GTAGCACCACATGATTCGGCTG.............................................................................................................22121.00210210000
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................20119.00194120120
....................................................................................................................................................TAGCACCACATGATTCGGCTGTC...........................................................................................................23115.0015310281
..........................................................................................GCCCGGATTCTGTGTGTGCT........................................................................................................................................................................20114.0014030128
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................22114.00141200110
....................................................................................................................................................TAGCACCACATGATTCGGCTGCT...........................................................................................................23112.0012020190
....................................................................................................................................................TAGCACCACATGATTCGGCAA.............................................................................................................21112.00120120000
.....................................................................................................................................................AGCACCACATGATTCGGCTGA............................................................................................................21111.00110110000
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................2217.007160000
....................................................................................................................................................TAGCACCACATGATTCGGCTGGC...........................................................................................................2316.006002130
.....................................................................................................................................................AGCACCACATGATTCGGCTA.............................................................................................................2016.006060000
....................................................................................................................................................TAGCACCACATGATTCGGCTGCA...........................................................................................................2315.005400010
....................................................................................................................................................TAGCACCACATGATTCGGCAC.............................................................................................................2114.004310000
....................................................................................................................................................TAGCACCACATGATTCGGCTCG............................................................................................................2214.004000040
.....................................................................................................................................................AGCACCACATGATTCGGCTGC............................................................................................................2114.004040000
...........................................................................................CCCGGATTCTGTGTGTGCTGCG.....................................................................................................................................................................2214.004020011
....................................................................................................................................................TAGCACCACATGATTCGGCTGTAC..........................................................................................................2423.507700000
.....................................................................................................................................................AGCACCACATGATTCGGCTGG............................................................................................................2113.003200010
...........................................................................................CCCGGATTCTGTGTGTGCTG.......................................................................................................................................................................2013.003030000
....................................................................................................................................................TAGCACCACATGATTCGGCTGTTA..........................................................................................................2413.003120000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAA...........................................................................................................2313.003300000
...................................................................................................................................................GTAGCACCACATGATTCGGCT..............................................................................................................2113.003030000
..........................................................................................GCCCGGATTCTGTGTGTGCTA.......................................................................................................................................................................2113.003030000
.................................................................................................................C----TGTGT---------TCTTAAAA----GCCG..................................................................................................................................1813.003201000
..........................................................................................GCCCGGATTCTGTGTGTGCTGA......................................................................................................................................................................2213.003300000
....................................................................................................................................................TAGCACCACATGATTCGGCTCT............................................................................................................2212.002010010
......................................................................................................................................................GCACCACATGATTCGGCT..............................................................................................................1812.002020000
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................2212.002010010
....................................................................................................................................................TAGCACCACATGATTCGGCTGAT...........................................................................................................2312.002100100
....................................................................................................................................................TAGCACCACATGATTCGGCTGTCA..........................................................................................................2412.002100001
....................................................................................................................................................TAGCACCACATGATTCGGT...............................................................................................................1912.002110000
....................................................................................................................................................TAGCACCACATGATTCGGCTGCC...........................................................................................................2312.002000020
..........................................................................................GCCCGGATTCTGTGTGTGCTGCGT----................................................................................................................................................................2412.002001010
........................................................................................................................................................ACCACATGATTCGGCTGT............................................................................................................1812.002100100
....................................................................................................................................................TAGCACCACATGATTCGGCTGTCC..........................................................................................................2412.002200000
.....................................................................................................................................................AGCACCACATGATTCGGC...............................................................................................................1812.002020000
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................2212.002100010
.....................................................................................................................................................AGCACCACATGATTCGGCTAA............................................................................................................2112.002020000
...................................................................................................................................................GTAGCACCACATGATTCGGCTGT............................................................................................................2312.002020000
.....................................................................................................................................................AGCACCACATGATTCGGCTGTT...........................................................................................................2212.002020000
droAna3
A------------AATGT---------------------------CATTCGC--------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGAGCTGCGC----CGTTCT-----------TTCTA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAT--------------CATC------------CTGTTG---GCT-GA----CAC-----------------A---------AGAA-ATTCGCCA--SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................211113852.0011385216244916411185177014961516
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................2019417.00941710166871268250138874
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................2116196.006196861667465
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................2214527.00452762134434619441182
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................2212851.00285110826653621417
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................2011624.001624116220100
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................2111591.0015914314783701617
....................................................................................................................................................TAGCACCACATGATTCGGCTTAA...........................................................................................................2311040.0010404898010002
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................201873.00873774981000
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................211766.00766186496558138
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................191722.0072215441016192121
....................................................................................................................................................TAGCACCACATGATTCGGCTTC............................................................................................................221496.00496104706721
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................231271.0027164155131614
....................................................................................................................................................TAGCACCACATGATTCGGCTTTA...........................................................................................................231249.00249112303311
..........................................................................................GCCCGGATTCTGTGGGAGCTGCG.....................................................................................................................................................................231215.0021596422123132
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................221202.002023085425454
....................................................................................................................................................TAGCACCACATGATTCGGCTTAAA..........................................................................................................241188.00188161675000
..........................................................................................GCCCGGATTCTGTGGGAGCTGC......................................................................................................................................................................221150.00150274198956
..........................................................................................GCCCGGATTCTGTGGGAGCTG.......................................................................................................................................................................211128.00128336537515
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................181120.001204123513137
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................20198.00985827103
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................22159.00593551000
....................................................................................................................................................TAGCACCACATGATTCGGCAA.............................................................................................................21158.00583541000
......................................................................................................................................................GCACCACATGATTCGGCTT.............................................................................................................19154.005424290001
...........................................................................................CCCGGATTCTGTGGGAGCTGCG.....................................................................................................................................................................22154.005424150348
....................................................................................................................................................TAGCACCACATGATTCGGCTTTAA..........................................................................................................24148.00483450000
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................19145.00453960000
...................................................................................................................................................GTAGCACCACATGATTCGGCTT.............................................................................................................22138.00383420002
.....................................................................................................................................................AGCACCACATGATTCGGCTTT............................................................................................................21137.00373430000
....................................................................................................................................................TAGCACCACATGATTCGGCTAAA...........................................................................................................23131.00315242000
....................................................................................................................................................TAGCACCACATGATTCGGCTGT............................................................................................................22129.00295211200
...........................................................................................CCCGGATTCTGTGGGAGCTGC......................................................................................................................................................................21126.00265603111
....................................................................................................................................................TAGCACCACATGATTCGGCTTAT...........................................................................................................23125.00253170401
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................22116.0016390013
....................................................................................................................................................TAGCACCACATGATTCGGCTTAC...........................................................................................................23114.00140140000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTC...........................................................................................................23112.00122100000
..........................................................................................GCCCGGATTCTGTGGGAGCT........................................................................................................................................................................20112.0012290010
.....................................................................................................................................................AGCACCACATGATTCGGC...............................................................................................................18111.00111010000
....................................................................................................................................................TAGCACCACATGATTCGGCCC.............................................................................................................21111.00110110000
...........................................................................................CCCGGATTCTGTGGGAGCTG.......................................................................................................................................................................20110.0010700102
....................................................................................................................................................TAGCACCACATGATTCGGAC..............................................................................................................20110.00100100000
..........................................................................................GCCCGGATTCTGTGGGAGCTGCGT----................................................................................................................................................................2419.009500022
..........................................................................................GCCCGGATTCTGTGGGAGCTGT......................................................................................................................................................................2219.009240111
....................................................................................................................................................TAGCACCACATGATTCGGT...............................................................................................................1918.008210212
..........................................................................................GCCCGGATTCTGTGGGAGCTGCAA----................................................................................................................................................................2417.007250000
..........................................................................................GCCCGGATTCTGTGGGAGC.........................................................................................................................................................................1917.007070000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTTA..........................................................................................................2417.007060100
.....................................................................................................................................................AGCACCACATGATTCGGCTG.............................................................................................................2016.006600000
.....................................................................................................................................................AGCACCACATGATTCGGCTTA............................................................................................................2116.006420000
.....................................................................................................................................................AGCACCACATGATTCGGCTC.............................................................................................................2016.006060000
.....................................................................................................................................................AGCACCACATGATTCGGCTTAA...........................................................................................................2216.006330000
.......................................................................................................................................................CACCACATGATTCGGCTT.............................................................................................................1816.006330000
..........................................................................................GCCCGGATTCTGTGGGAGCTGCA.....................................................................................................................................................................2316.006060000
......................................................................................................................................................GCACCACATGATTCGGCTTT............................................................................................................2016.006310110
....................................................................................................................................................TAGCACCACATGATTCGGA...............................................................................................................1916.006010023
......................................................................................................................................................GCACCACATGATTCGGCT..............................................................................................................1815.005230000
.....................................................................................................................................................AGCACCACATGATTCGGCTTG............................................................................................................2115.005310001
..........................................................................................GCCCGGATTCTGTGGGAGCTGCGA----................................................................................................................................................................2415.005050000
....................................................................................................................................................TAGCACCACATGATTCGGCG..............................................................................................................2015.005131000
droBip1
A------------AATGT---------------------------CATTCGC--------------------------CTGTCCTACGCAGCCCGGATTCTGTGGGGGCTGCGC----CGTTTT----TTTCT--GGCTA----ACCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAT--------------CATC------------TTGTAA---T-TTGT----CAA-----------------A---------AGAA-ATTCTCCAAASizeHit CountTotal NormTotal
No Reads
droKik1
A------------AATGT---------------------------TTTTCAC--------------------------CTGCACCACGCAGCCCGGATTCTGTGGGGGCTGCGC----TGTTCC----CCT-TTCCGCCA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGCCAG--------------CATCCAC---------GGA--------TCGC----CACCCGGAATTACCCG----------AAA--------AGTTCA--SizeHit CountTotal NormTotal
No Reads
droFic1
G------------AGTGT---------------------------CATTCAC--------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGAGCTGCGC----TGTTTA----TACTC--CAAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGCGCAGGACAG--------------CATC------------GGCTGTA------GCCATAAAGC------------CTAC--CCAATATT-GGC-TCCATTTA--SizeHit CountTotal NormTotal
No Reads
droEle1
G------------AATGT---------------------------CATTCAC--------------------------CTGCACCCCGCAGCCCGGATTCTGTGGCGGCTGCGC----TGCTTC----TAC-TATCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------------CACC------------GGATTGC--A-TAGT----CAG---------------------------A----GTTACCAA--SizeHit CountTotal NormTotal
No Reads
droRho1
G------------AATGT---------------------------CCTTCGC--------------------------CTGCACCCCGAAGCCCGGATTCTGTGGAGGCTGCGC----TGCTTC----TTT-TCTCAAAT----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------------CATC------------GGCTTCC--A-AAGC----CAC---------------------------C----ATTACACA--SizeHit CountTotal NormTotal
No Reads
droBia1
G------------AATGT---------------------------CAATCAC--------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGC----TGTTTC----TACCTCCCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGGCAG--------------CATC------------GCGTGCT-------C----CAACTACAGCCAACAG----------AAA--------AAGCTA--SizeHit CountTotal NormTotal
No Reads
droTak1
G------------AATGT---------------------------CACCCAC--------------------------CTGCACCCCGCAGCCCGGATTTTGTGGGGGCTGCGC----TGTTTC----TGC-CGCCAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAG--------------CATC------------TAATCTC------TA----CAACTAGAGTTTACT-----------A--------TCCATCCC--SizeHit CountTotal NormTotal
No Reads
droEug1
G------------AATGT---------------------------CATTCAC--------------------------CTGCACCCCGCAGCCCGGATTCTGTGAGGGCTGCGC----TGTTTG----TGA-TTCTAAAT----TCCGTAGCACCACATGATTCGGCTTCGTGGAGCAGGACAG--------------CATC------------AGATTTTCTC-T----------------------------TTTAAA--------ACGACCCT--SizeHit CountTotal NormTotal
No Reads
dm3
G------------AATGT---------------------------CATCCAC--------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT---------C--CGTAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTACAGGATAT--------------CATC------------GGTTTTT--GCTAGC----AAA-----------------C---------G----GGT-AATC--SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................2111759696.00175969600109929167263179773614142200955221167101695317696185899039163149175410898972730537245124743092205233032553873393615116372550104024714197518641052904705241141052227067000000000000000006312637851594170172256893722313356277632423310215941342331671568124312812812714591941187638524156128840961220151805252906161432510011931121549379916413231253259422396978202553296628232126980523059064680373837053863516535683043871225343747646275711344681675941427382017492153234620324191015696653864501208902128111813842150136923122383471255055833631691202012276147567781512751084132756209401101262164678020117439331210770363748152701584627564129683631611520612578842425564696865127509119927301762501002040247652698053138395492302593362746412090461348028112375286835343358338451050771127862163598459729051269381851183219585106536862482812090892771727310567115613130669130669635972078657131142259240681737163816492217205513759101915251007285218807586711427740680101725832805777662715052251440140658401190614834136861229140642312215981186232656514398160258645645612885714638213166972879151094311288216730
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................201226177.002261770000341012811211993286400141228122315316174831411457614411912652803442442962044138912981237722243624474982737121692792883000000000000000002742722541577152491201021182202147240162383551222021278944024398905921051316176011951031101200709825025341373214100020031615206617605083483484472492808618232662725236501103226167446047340110822008996425071128687130295107455337163214791355165299978307579340001682162214020009530140359180111855132184411731560457632266321621534376173164466351025342518721000184221129117101476406313517431325245638834725421426945777483447649545334415390224359414081746141610856492049154743235192163205276202003150421272141066322432603112532824161328172506383181151148419982846931624115761609469840221535650247013881347111343922112123172712791994172868559833071743337597117293086190938520
..........................................................................................GCCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................23166035.006603500002122314101040000003111000180300000226412513302935383041939911605148113800110000000000000000005239282825461373302696010672325062413135520124472031924545120341339311051226901110020301223057000012103088202192871113925522237123345150142175892110015232150108495033310160091726311113495313802161987240202525000002630020140281192103394278291193666146929641198256163276041500000724641013408387209193894632698217582118642722810753475324131255174669792464213221258425267769137413441876411234534126449419339730273946310214932583375261746873151044195418202713086320726271118454148366961544989731958261477624247148414364025326215381343852971
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................22155179.0055179000011974315293101300334660251717300000007405145415810156128302754305483149118432603000000000000000000000160160132985134851428521120193352134017351700263673430735266660711611792646946870631505013217040369610000021070221402781231698487140106871559180230105001003332231901812007588443073532248134217648115102111618829557014425114111582073584150000075171007000342202119298784901112371793733382511119926262691744111001931103122648419312749616511342620124319581931143435220522415292141150550197285459409324179322208970340413543316485366266633431980736634050672485615212531061717633399032849916192499811034450802296261194232534833012246362432919144285392393317455663644911380
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................22136273.003627300001013144002011002002969470126000000017524578545771285840159711731011135854210000000000000000000000011981171972842531583313407509824500462903249988820117938489501150403271619140001410100191631781121128375148667544263111340000046107262110288601110713112016445007248613036211341276002071854000019527250010041201979116292012776216171191589023612204919300192141953210749261376199394251818181462320273577594446245503994622375881164735594327565449864332219313762034241947514923178543941082313719872914833835124863962351043858606391227968195121391070
..........................................................................................GCCCGAATTATGTGGGAGCTGC......................................................................................................................................................................22124277.002427700000023210012000000780001310006101060438137961959438729224132531681072890032000000000000000000131248178124469876956615101281820001114010914524121923202132301933000000000000100000130110269244275264142841579415410918196132137100300009013106002000021060101003636132278360101171700000305101000043503328125026981513411516622860111165190212000010903615153147195132153149929828817757191317926118706675292111003418167133682481424360200925013462051115641711064241412631451671302813187634148508101513973779106580421246100921175337263538012210474433814335493046211534559
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................19120313.002031300000000000000541252300292321211518401195111222144028662877651412010433272751484760001151000000000000000007179574701152677002010141000000131424144621101533670001000042552531330000095441435410333332722275175596470030042114162792743012784301610311113931446443164121805533886234319720210144601000875022001025647178140334589401399810547235815811303931390000212123524224787981165881173269120546823556537840893971354226535103142188231841822025164493414230184906511321453146741671385405249693689844482478209856117931313624116275906671112391922526004591012720
..........................................................................................GCCCGAATTATGTGGGAGCTG.......................................................................................................................................................................2118140.008140000000121000010000002720008000000018821102283210111310312671211202990003400000000000000000068310362619126600200225100000038264235391030316010000000000100000000030761319255482649785244521233413000001208804310000420100013020110121121919200306160000019510022002016564783472371642803623167620010000733205121881111182663020731096128152204918282425134835192101713076778412249413121535141179825196401825016413623112032519217171116211372568101212172558514743550
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................2117732.00773200005112151060516000000722030350000000713330817019741134101310106360000000000000000000000201816122591429176912840511047921006143914192019701143034051010102010010000020020103852276234113981126105220000030843274604101155169401413701296492711004134000003462006000702262311311153122269728381310100078131343901604210306155531311412139831158981278522311665986039101846164674650031087230338901800412840682042067516910861110071595391220260
...........................................................................................CCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................2217631.00763100000009300212010000300204282240111021131412921133588510000000000000000000000013881101971712174223729322930106149016246051541037537227134041116031010001000110010110000181914831414183915812118300110220217025103051611232623521541623800423396000001100000320001001920112213031132086427734138644730114160000641126230242104633913131119022142335862320813418533161595122014745827136321382023272831410101431613111221914491111115342950261347448181508529178470133185981912681020815111702851150
....................................................................................................................................................TAGCACCACATGATTCGGCTTC............................................................................................................2215642.00564200000000000000010100333200100000000053356012156110415141231000198106530000000000000000010201025098116010022202002200915211960035114074010000010550000500000281212663139100581260000071012226211031043020713009015038154710010140000041100000019992848612649910549171115110047210232010151312129211583333518154321108102031433231131819423835654396832520182131342422618021180511394795411650215134409419251825540191557263114131010711171221500
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................1813506.00350600000000000000002219006804125216430009147131415348111774381000122000000000000000006108804105666000000130000000210191141014031216300000001833014359000008141016581537880378602231171666213337023416951321241045564270624726590030211011031170001002216122350202346113711238132323000088103585203521215317311438710172111187622384644461716926478952412941132397118104982106217843938110112732917203563861451240040042753046990
....................................................................................................................................................TAGCACCACATGATTCGGCTTAA...........................................................................................................2312799.0027990000208840000300000027000000000000126311493237311206665430000000000000000000000011200842446351016200010117310021200172318290311710250020000100100100000200005264823101241441109179400000100000030000020104010000000342214000341000000836002000101111730199201024151059400700003203042020021000001001010000011014272122815245301141272210100014930001244142369601010126671720000000133102021525050330
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................2112786.002786000011201003060000001000017000000001222413810111464100000000000000000000000059421312104553024021100013407181165204200305100010102032000000010002213218121289100000412632617022123241214404536015024262000001000000440000002015712146661236202299247000054400874130020961820115810124831382123161242924147199441912516711273918743524507001059765713508921382132837311313101161819301621500942892119350
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................2011703.00170300001001000000000000010000123100000031104053003002592000063000000000000000000812990303735310300142000330067251514104013171010201000000000000120143321252611120000002901322323280187318418116111250502010020060020060000001004000712841126187042181123285004000032110212600203014203225522012786516462538721293756568312001122521904226190600818126237223181096400301230445320
......................................................................................................................................................GCACCACATGATTCGGCTT.............................................................................................................1911443.00144300000000000000000000260000000000000000000310000000001000000000000000000000004223233413179271761162051574001571373965596141132100000000000000010000000000021002111200030000003811201044020001010200003010403015000000000002000100013132123310460030000000011010020600100010101112000021573017342517621663654124104100052001038040221411095052004304200100101010000
...........................................................................................CCCGAATTATGTGGGAGCTGC......................................................................................................................................................................2111245.00124500000000000101000000000001000000000210031042110203210200000000000000000000002003030014110002003341000000135170612113500000000000000101000000514109032365210515600000030010020000130200030003001311100000000000001100000010323031647515516130651000031113417401107053319415934255161340933228084210376441111131256001005516531193219221134268195118642916153212136262118121150
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................2111201.00120100001100431102010000010000000000003010162021010362020000000000000000000000005104401011103310010000000000846311002031010000001000100000000000022330121003111000005040025902000312014451640616040301000000000000130000001000362002102031104100000021063361312120110321421117871234133115416392824182450832715011121722202251614521833301262016210100212000200100310240
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................2311195.0011950000000010000200000022000040000000011020047232101110100000000000000000000000551203100045000000012000200122029172601301002100000003021000000000003406102210023100100805101033104000101021400011500115101000708600000410000001045244405781484177008000010210102511102142063202457524126158111081531266383365262795215203270114081781812001312101122421318841131041413026169650
....................................................................................................................................................TAGCACCACATGATTCGGCTTAAA..........................................................................................................2411158.001158000000100000000000001200000000000001431501371230235213000000000000000000000000000026626910000000030000000011100304008001000000000000000010000213117101231126023810000000000000000000000000000000031213000000300000720000000000532019221203036184300020000000101000000000000000010000000000121985641714674600000000060010918631023000000133683000000000000001803020000
..........................................................................................GCCCGAATTATGTGGGAGCTGCGT----................................................................................................................................................................2411035.0010350000000000000000000000000000000000011100100303102001000000000000000000000000040201136896001003021000100196105020000000000000000000100000000000531211475102005000003000203000001203000100301000003000001100000000000000826590180861283712009000010001727110311145531027147553075145126312220212320101325052213151211504663011400110929220215375125112541020811204178713220
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................2011007.0010070000001000000000000012020040000000431105026400009421010000000000000000000000000007000210000000000000000212050001001000000000000100000000000175961222202923000006031400500000010001000007104641117000010000001200000050010310321821614211100001003000111200330010401020321014206111611163211591257671270030234012193171207005241038205112339340000133329164210
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................221901.0090100000000000000000000000102300000000112020340112142223000000000000000000000000110010010021000000000000000030010000120510000120104000100000001020111003020000000000100061603010200122730001205233100010000000025000000000690334474411071030000020001513242114102120254020531133741579127811103775451091011532000006273101901044416410425424400150002029115100
...........................................................................................CCCGAATTATGTGGGAGCTGCGC----................................................................................................................................................................231708.007080000000020000000000000000000000000020000012100102212000010000000000000000000001008247202420010002200100100603301011111000000000000000000000000122102243230200300000000000100000010000100030000000100000040000000000000213110021687219172031430000110112312000010201021011132203110032062124103440530225950050463120501225252258111243111199115032016421080
....................................................................................................................................................TAGCACCACATGATTCGGCTTTA...........................................................................................................231643.006430000001100000000000001110010000000010000073001005351100000000000000000000000010001212047600021000100000004342302120160020100000001000000000001711093141311433000001001001140000011100040000000291300000100000045000000030310104104542340001000000011003131001101061010120001313252072233623632623210172100014444231100032212242003023241001023200421110
..........................................................................................GCCCGAATTATGTGGGAGCT........................................................................................................................................................................201622.0062200000000000000000000000000100000003130110103100100022000000000000000000000000011040300103200000100000000087339131000000000000000000000000000002550011302000200100020000023000000000000003010212000000006000000100000000065340047220120000000002000012000000000001000010016140122352140110614101000001001011110301116034000100110000200010032110
....................................................................................................................................................TAGCACCACATGATTCGGCTTAT...........................................................................................................231540.00540000000012000000000001211000000000010002100300102311300000000000000000000000011000500411100000112100000001300110100000101000000010000000000002514011211000410000010000006000010010100000010365220004020000002200000003021710478513352000420001001101000100400002002010101000005294274815462141100112000027333200110014221120000004001020310020150
....................................................................................................................................................TAGCACCACATGATTCGGT...............................................................................................................191464.0046400000000000000001000100002000000000200032160110514420000000000000000000000000000001000000000000000001000001000000000100000000003000000000002211341100030312000000000003901210110038000260120120010010200000000001200101427222711420226320000212103011042041621025143310724145103011300293092333311020000016102410303010002001021211155111525880
....................................................................................................................................................TAGCACCACATGATTCGGCG..............................................................................................................201455.00455000000000000010000000000001000000030000000000000100000000000000000000000000000000000000300000000000000001120000000000000000000010000100000000200100010001000000220011110000001007742000530302016000000000000000000020100010000000011004000000000301100301000001120000020011329172115205481712131375110101000112142030036001000010070201000000000230
.......................................................................................................................................................CACCACATGATTCGGCTT.............................................................................................................181410.00410000000000000000000001200000000000001100100100000100100000000000000000000000047580000000000000000000000001000000000000000000000000000000000203000014241107000000103010110002000012000000124500000200000050000011000000531430000000000700100000410000000000000000002110000022230020862911051409301100106100102013020114034071001301100000301200110
..........................................................................................GCCCGAATTATGTGGGAGCTGCA.....................................................................................................................................................................231392.003920000000110000000000000000000000000010301001112011151000000000000000000000000000009801211000000000000000333100001001500000000000000000000000031274022211010100000000000000000000000000000000000000000000000000000000020031114050512400020000000001000000001200000002000211001181741821429111100200270015158414012002413014150020212060101401015130
....................................................................................................................................................TAGCACCACATGATTCGGCTTATC..........................................................................................................241371.00371000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027890000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................201365.0036500000000000000000000000010100000003000110030000000000000000000000000000000003001000000000000000000000000102010000100000000000000000100000000010000110001000000000000100000000000021102011101011001000000000000000012035100000000140010000030010000001000100011101000311130244353276431422117100030100056630800670461121101334210000122134140
..........................................................................................GCCCGAATTATGTGGGAGCTGCGA----................................................................................................................................................................241327.0032700000000000000000000000000100000000000000100010000000000000000000000000000000000034216020000002000000100601102000102400000000000000000000000004480023200100000000000000010000000001000000000000200000000000000000000030010072337254500210000100020000000102001010010000111231117655521032201000110000101411809000301015251714922000100101313020
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................191255.00255000000000000000000000000061100000000000010000000010000000000000000000000000000200010000010000000000000400143000000000000000000000000000000000000002010000020000000000022000021020143000020440001300000000000000000000000210022020020000000001110000000400111001000001000401048414236192110000000000000004100000002024211000100000000000002000
..........................................................................................GCCCGAATTATGTGGGAGCTGCT.....................................................................................................................................................................231243.002430000000000000000000000000000000000000010010100100121000000000000000000000000000004470211001000000000000703100000000000000000000000000000000022000121200110000003001000000000000000000000000000000000000000100000000210010200101001000000001000341400102002301213110001324212052904160252200001401122001050140012060110001440000100010111120
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................221228.00228000000020000000000001000000000000000120101100000002200000000000000000000000002000507051000000100000000005400000100000000000000000000000000001600100000000000000000000000000010000000000000020200000000000002000000000001001212200000000000200000000000000000000000010001000122322443212000000000310002210160000011314000000000000001101000000
..........................................................................................GCCCGAATTATGTGGGAGCTGT......................................................................................................................................................................221210.0021000000000000000000000000000000000001000010000000010210000000000000000000000000100000201210000000100000004311030000000000000000000000000000000121001102000100000002000001001000000000000000000010000001000000100000001021231544436230003000001000104100005010003100011060302000731268010500000011000200125110014065110130000000000000113020
....................................................................................................................................................TAGCACCACATGATTCGGCTTCA...........................................................................................................231209.0020900000000000000000000100000100000000010010110000120100000000000000000000000000010000001100000000000000000000000000010000000000001000000000000000101011000000000000000000000000000000000010000000000000000002000000003030000012020120000000000010000000001000010000100100000011953722521810000000060000237160300124311002100001000000000001130
...................................................................................................................................................GTAGCACCACATGATTCGGCTT.............................................................................................................221204.0020400000000100000000000010001000000000001000000001100110000100000000000000000000001000300010000000000000000010000000000000000000000000000000000010001000000000000100000011000001000020000000010010001000000000000000000011010000000030000000010000120000001000000012000207031031121312061522010000017310200718000023043110211501100010010121140
..........................................................................................GCCCGAATTATGTGGGAGCTGCGC----................................................................................................................................................................241196.00196000000000000000000001010000000000001000000000000010000001000000000000000000000000000200000000000000000000400000000000000000000000000000000003200100010030000000008000000000000000010000000000000000000000000000000300120021100001210100000000010000000200000000000000021001050401020020200101300021022405000342940213001724100112101001210
....................................................................................................................................................TAGCACCACATGATTCGGCTTCT...........................................................................................................231168.001680000000000000000000000000010000000001000112000001110000000000000000000000000100000003000000000000000000000000000000000000000000000000000000002000100000010000000000000000000000000000000000100000000000000000000000001400003000100001000000000000000110000401100000212120121172194300102100300002000101416130000002010101201000000000100130
....................................................................................................................................................TAGCACCACATGATTCGGA...............................................................................................................191153.001530000000000000000000020000150000000100000024011004550000000000000000000000000020000010000000000000000000000000000000011010000000000000000000021010100000201000000000000100000020002000000000000000000000000010000000023110150011000010000000000210000100150000100010112103010202031103408100020001002100301190000000001000000301000111030
..........................................................................................GCCCGAATTATGTGGGAGCTGCC.....................................................................................................................................................................231152.00152000000000000000000000000000000000000000013100100000000000000000000000000000000000020000000100000000000000000000000000000000000000000000000011100100110010000000180000000000000000000000000000000000000000000000000010000010000000000000000000012100010000020321100000001130312371612012110000111012020220310003020000100133000000000010000
...........................................................................................CCCGAATTATGTGGGAGCTGCGT----................................................................................................................................................................231145.001450000000110000000000000000000000000000000001000000201000000000000000000000000110200040001000000100000100300100000100000000000000000000000000011000010102006000000300100140000000100201000000000000000010000000000000101200010005222022000001000000100000201020001010101010100000000000320100001000000022000001011230103414100900100611310
....................................................................................................................................................TAGCACCACATGATTCGGCTCT............................................................................................................221130.0013000000000000000000000000000100000001000000000000000100000000000000000000000000000000000001000000100000001000000000000000000000001000000000000000000000000000000001000021000000000000000010110000000000000000000000010101100000000010040000001001001001001100042101110300000036112222031001300002000005431030001110100100000200000000201330
..........................................................................................GCCCGAATTATGTGGGAGC.........................................................................................................................................................................191127.001270000000000000000000000000000000000120001100010000111000000000000000000000000040100000201010000011000000071891000101000000000000000102100000021000121022000000000000000000000000000000000100010000000000000000000000000562800541000000100000000000000000000010100100014110221000000000301000000000100000000010000000000000000000000000000
....................................................................................................................................................TAGCACCACATGATTCGGCAA.............................................................................................................211127.001270000000200110000000011000000000000000110041000011100000000000000000000000000000011400500000100010000000000000002001000000000000000000000000011271000200130000000000000100000000000000000001603000000000000120000000010000020102010000000000000000000000000000000001000001000702415020000000005100101100010010057000000000000000000100000
....................................................................................................................................................TAGCACCACATGATTCGGCTTCG...........................................................................................................231123.0012300000000000000000000000000000000000000100100000000010000442390000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000100000000000000010000000100000001000000230602020010200000000100201000001000003012100300100100001100
..........................................................................................GCCCGAATTATGTGGGAGCTGCAA----................................................................................................................................................................241118.00118000000010000000000000000000000000000010100010000000000000000000000000000000000000410030000000001000000000000000000000000000000000000000000001410330000000300000000000000000000000000000000000010000000000000000000000010000010412100000000000000000000000000000000000000000021221836060000000001000011502000000044000000000000002100000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTC...........................................................................................................231116.001160000000000000000000000000000000000000000000000100012000000000000000000000000000100003121000001000000000233000000000000000000000000000000000013000000010300000000000000100000000000010001000030000000000000000000000002311102231400001100000000110000000000000000001020000100217015232000100011000003113000010001000100000000000010011130
....................................................................................................................................................TAGCACCACATGATTCGGCTTTAA..........................................................................................................241116.0011600000020000000000000010000000000000010000422000010000000000000000000000000001001040115000000000300000003010000020000000000000000000000000000100300001000000000000000000000000000000000000000100000010000000000000000001001010200100000000100001000000000000000000000000000103010205100000000200001344700000013104000000001000000000020020
..........................................................................................GCCCGAATTATGTGGGAGCTGCGC----C...............................................................................................................................................................251112.0011200000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000020000000000000000010000000000000000000000000000000000000000000020003002002000000000000000000000000000000000000000000000000100000000000400010121601700004243000010800000002200000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAC...........................................................................................................231105.0010500000000000000000000010000000000000000100010110000100000000000000000000000000100000012100000000000000003211000110010000000000000000010000000010000000010000000000000000000000000001000000012000000000000000000000000002000010010000011030011000000000000010000000000000100001925212130010000000001003510000000142000000000000000100000010
....................................................................................................................................................TAGCACCACATGATTCGGCTAAA...........................................................................................................232103.0020600000000000001000000110000000000001001100000000000001000000000000000000000000000000303000000000000000000000100000000000000000000000000000000130310100000000000000000000000000000000000000002100000000000000400000000000000020100220000000000000000000000000001000000000001051333166101600000000000000325310000001014000000000000001200000000
...................................................................................................................................................GTAGCACCACATGATTCGGCT..............................................................................................................21196.0096000000000000000000000000010000000000000000100000010000000000000000000000000000000100000000000000000000000200000000000000000000000000000000002050000000000000000000000000000001000000000100020200000000000000000000100100000000000200000000001010000000100000100010000140000021023020022010002000100502020021055201211310030101000011140
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................22187.0087000000000000000000000100000000000000000010001100001100000000000000000000000000000100001100000000000000000000000000000100000000000000000000000100000000000100000000000020000010000000000000301000030000000000000000000060010001000000000000000000000000010000100011000000000191819060010000000000000202000021102000000000000101001110110
droSim2
AAGCATAGGAAGAAATGT---------------------------CGTTCAC--------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT---------C--CAAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATAT--------------CATC------------GGTTTTT--GCTAGC----CAG-----------------C---------C----AG---TCC--SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................211314505.00314505114761552183293454365471670017153248162349917784137221362719103848
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................20126806.00268065200311284119237184177412053022669157223024112010
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................2218648.0086488634711067700873753251218213051798176000
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................2216254.00625424681725471320025628033737123120801359001
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................2114637.0046373773956763400772235510000
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................2113427.0034275543873234002593177515891038537000
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................1912416.0024163222015381382193112943552543291003000
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................2112226.0022261286477924001114121344201000
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................2011117.0011177683231310000111000000
........................................................................................................................................................ACCACATGATTCGGCTT.............................................................................................................171930.00930000000621421887000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAA...........................................................................................................231883.0088330138928004825155143383158000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAAA..........................................................................................................241444.0044420912600342513010524322000
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................181417.0041700035210852304425101101000
..........................................................................................GCCCGAATTATGTGGGAGCTGC......................................................................................................................................................................221394.0039430200200003374901000
....................................................................................................................................................TAGCACCACATGATTCGGCTTC............................................................................................................221385.0038599548141019366149371312000
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................201307.00307901621910459527012009
....................................................................................................................................................TAGCACCACATGATTCGGCG..............................................................................................................201306.003061641512310000003000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................231281.0028159985006476401172000
..........................................................................................GCCCGAATTATGTGGGAGCTG.......................................................................................................................................................................211263.002638122010000248001000
..........................................................................................GCCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................231218.002180007001301015523162100
....................................................................................................................................................TAGCACCACATGATTCGGCTAAA...........................................................................................................231182.00182006300383263382000000
......................................................................................................................................................GCACCACATGATTCGGCTT.............................................................................................................191178.001784182002874141010000
...........................................................................................CCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................221154.00154200900380130974729000
.......................................................................................................................................................CACCACATGATTCGGCTT.............................................................................................................181151.0015139652100121247000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTA...........................................................................................................231133.0013344720200459850524000
....................................................................................................................................................TAGCACCACATGATTCG.................................................................................................................171125.001250000000100124000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................221118.00118855920033215102000
.........................................................................................................................................................CCACATGATTCGGCTT.............................................................................................................161114.00114000000111121179000000
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................201102.00102414100131644134110000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAT...........................................................................................................23198.0098703400108231230226000
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................22173.007320192005415165113000
...........................................................................................CCCGAATTATGTGGGAGCTGCGT----................................................................................................................................................................23160.0060000000101200253100
........................................................................................................................................................ACCACATGATTCGGCTTT............................................................................................................18157.00572648000000019000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTCG...........................................................................................................23155.005511090131710120010000
....................................................................................................................................................TAGCACCACATGATTCGGCTGT............................................................................................................22150.0050422200000003001000
....................................................................................................................................................TAGCACCACATGATT...................................................................................................................15149.0049000000010147000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTCA...........................................................................................................23147.00470000008617132100000
...................................................................................................................................................GTAGCACCACATGATTCGGCTT.............................................................................................................22145.00451011440031713010000
........................................................................................................................................................ACCACATGATTCGGCT..............................................................................................................16143.0043000000003040000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGG............................................................................................................22138.0038350200000000100000
........................................................................................................................................................ACCACATGATTCGGCTTA............................................................................................................18137.00376017000001013000000
....................................................................................................................................................TAGCACCACATGATTCGGCGG.............................................................................................................21134.0034291400000000000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCGA----................................................................................................................................................................24132.0032000200110928000000
..........................................................................................................................................................CACATGATTCGGCTT.............................................................................................................15132.0032000000315320000000
....................................................................................................................................................TAGCACCACATGATTC..................................................................................................................16131.0031000000000031000000
..........................................................................................GCCCGAATTATGTGGGAGCT........................................................................................................................................................................20128.0028000010105120000000
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................22126.0026100000305600011000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAC...........................................................................................................23125.0025121620010110010000
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................19121.0021100110001403001000
....................................................................................................................................................TAGCACCACATGATTCGGCTGA............................................................................................................22121.0021170000000003001000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTAA..........................................................................................................24120.002000820010201042000
..........................................................................................GCCCGAATTATGTGGGAGC.........................................................................................................................................................................19119.0019000054000010000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTCT...........................................................................................................23119.001921800000132002000
...........................................................................................CCCGAATTATGTGGGAGCTGCGT----A...............................................................................................................................................................24118.0018000000000000018000
....................................................................................................................................................TAGCACCACATGATTCGGCAA.............................................................................................................21113.001300220001131003000
..............................................................................................GAATTATGTGGGAGCTGC......................................................................................................................................................................18112.0012000000000012000000
...........................................................................................CCCGAATTATGTGGGAGCTGCGC----................................................................................................................................................................23112.001200000050202012000
....................................................................................................................................................TAGCACCACATGATTCGGCCG.............................................................................................................21111.001170300000001000000
....................................................................................................................................................TAGCACCACATGATTCGGCCC.............................................................................................................21111.001180300000000000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCA.....................................................................................................................................................................2319.00900010000103022000
..........................................................................................GCCCGAATTATGTGGGA...........................................................................................................................................................................1719.00900000000009000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCGT----T...............................................................................................................................................................2519.00900000000001008000
...................................................................................................................................................GTAGCACCACATGATTCGGCT..............................................................................................................2119.00920100011012100000
....................................................................................................................................................TAGCACCACATGATTCGGCTTGA...........................................................................................................2319.00990000000000000000
...........................................................................................CCCGAATTATGTGGGAGCTGCGT----T...............................................................................................................................................................2418.00800000000000008000
....................................................................................................................................................TAGCACCACATGATTCGGAC..............................................................................................................2018.00840300000001000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCGT----A...............................................................................................................................................................2517.00700000000001006000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTC...........................................................................................................2317.00720100000111001000
...........................................................................................CCCGAATTATGTGGGAGCTGCGA----................................................................................................................................................................2317.00700000000200014000
........................................................................................................................................................ACCACATGATTCGGC...............................................................................................................1516.00600000000015000000
.........................................................................................................................................................CCACATGATTCGGCTTA............................................................................................................1716.00600000001212000000
....................................................................................................................................................TAGCACCACATGATTCGGCTCA............................................................................................................2216.00600100030110000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGTA...........................................................................................................2316.00660000000000000000
....................................................................................................................................................TAGCACCACATGATTCGGA...............................................................................................................1916.00620000011100010000
....................................................................................................................................................TAGCACCACATGATTCGGCTTGT...........................................................................................................2316.00660000000000000000
......................................................................................................................................................GCACCACATGATTCGGCTTA............................................................................................................2016.00600000000006000000
...........................................................................................CCCGAATTATGTGGGAGCTTTT.....................................................................................................................................................................2216.00600000000000006000
......................................................................................................................................................GCACCACATGATTCGGCTTT............................................................................................................2015.00500000000005000000
.....................................................................................................................................................AGCACCACATGATTCGGCTTT............................................................................................................2115.00500030000001001000
...........................................................................................CCCGAATTATGTGGGAGCTG.......................................................................................................................................................................2015.00510120100000000000
...........................................................................................CCCGAATTATGTGGGAGCTGTT.....................................................................................................................................................................2215.00500000000000005000
.....................................................................................................................................................AGCACCACATGATTCGGCTTA............................................................................................................2115.00500020010101000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCGT----................................................................................................................................................................2415.00500000000003002000
..............................................................................................GAATTATGTGGGAGCTG.......................................................................................................................................................................1715.00500000000005000000
...........................................................................................CCCGAATTATGTGGGAGC.........................................................................................................................................................................1815.00510001100002000000
...........................................................................................CCCGAATTATGTGGGAGCTGC......................................................................................................................................................................2115.00500000010001300000
.....................................................................................................................................................AGCACCACATGATTCGGC...............................................................................................................1815.00520010200000000000
.........................................................................................................................................................CCACATGATTCGGCT..............................................................................................................1515.00500000001022000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTATA..........................................................................................................2414.00410000000120000000
..........................................................................................GCCCGAATTATGTGGGAG..........................................................................................................................................................................1814.00400002000002000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTTA..........................................................................................................2414.00401000000000003000
....................................................................................................................................................TAGCACCACATGATTCGGCGA.............................................................................................................2114.00410000000003000000
.....................................................................................................................................................AGCACCACATGATTCGGCTTCG...........................................................................................................2214.00400400000000000000
.........................................................................................................................................................CCACATGATTCGGCTA.............................................................................................................1614.00400000001102000000
........................................................................................................................................................ACCACATGATTCGGCTC.............................................................................................................1714.00400000000004000000
..........................................................................................GCCCGAATTATGTGGGAGCTGT......................................................................................................................................................................2214.00400000000003100000
..............................................................................................GAATTATGTGGGAGCTGCG.....................................................................................................................................................................1914.00400000000004000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCAA----A...............................................................................................................................................................2513.00300010000002000000
....................................................................................................................................................TAGCACCACATGATTCGGG...............................................................................................................1913.00310200000000000000
...................................................................................................................................................GTAGCACCACATGATTCGGCTTT............................................................................................................2313.00310100000000001000
..........................................................................................GCCCGAATTATGTGGGAGCTGCAA----................................................................................................................................................................2413.00300030000000000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGTT...........................................................................................................2313.00330000000000000000
.....................................................................................................................................................AGCACCACATGATTCGGCTA.............................................................................................................2013.00300120000000000000
droSec2
A------------AATGT---------------------------CGTTCAC--------------------------CTGTACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT---------C--CGAAG----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGATAT--------------CATC------------GGTTTTT--GCTAGC----CAG-----------------C---------G----GGTATCCA--SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................21127694.002769415599117372963626
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................2011789.001789610115531533
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................221840.0084042766170177
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................201715.00715708061
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................221287.0028715997346
..........................................................................................GCCCGAATTATGTGGGAGCTGC......................................................................................................................................................................221177.001771057884
..........................................................................................GCCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................231166.0016643119319
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................211113.00113106322
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................211107.001075752223
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................19183.00833221831
....................................................................................................................................................TAGCACCACATGATTCGGCTTAA...........................................................................................................23169.0069400281
...........................................................................................CCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................22153.0053153305
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................21150.0050152258
....................................................................................................................................................TAGCACCACATGATTCGGCTTC............................................................................................................22139.0039185106
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................23137.0037177211
..........................................................................................GCCCGAATTATGTGGGAGCTG.......................................................................................................................................................................21127.002781711
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................22127.002720007
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................19125.002525000
.....................................................................................................................................................AGCACCACATGATTCGGCTTT............................................................................................................21123.002322010
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................18122.00228077
....................................................................................................................................................TAGCACCACATGATTCGGCTTAAA..........................................................................................................24121.002114061
...........................................................................................CCCGAATTATGTGGGAGCTGC......................................................................................................................................................................21121.00213576
....................................................................................................................................................TAGCACCACATGATTCGGCTTCG...........................................................................................................23115.00151167
...................................................................................................................................................GTAGCACCACATGATTCGGCTT.............................................................................................................22115.001514001
....................................................................................................................................................TAGCACCACATGATTCGGCTTTA...........................................................................................................23115.001510113
......................................................................................................................................................GCACCACATGATTCGGCTT.............................................................................................................19114.00149050
.....................................................................................................................................................AGCACCACATGATTCGGCTTA............................................................................................................21113.001313000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAT...........................................................................................................23113.00136034
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................20111.00113152
...........................................................................................CCCGAATTATGTGGGAGCTGCGT----................................................................................................................................................................23110.00104321
..........................................................................................GCCCGAATTATGTGGGAGCTGCGT----................................................................................................................................................................24110.00102224
...........................................................................................CCCGAATTATGTGGGAGCTGCGC----................................................................................................................................................................2318.0082051
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................2218.0085030
...........................................................................................CCCGAATTATGTGGGAGCTGCGC----C...............................................................................................................................................................2418.0080053
....................................................................................................................................................TAGCACCACATGATTCGGCTTCT...........................................................................................................2315.0053110
.......................................................................................................................................................CACCACATGATTCGGCTT.............................................................................................................1815.0053011
..........................................................................................GCCCGAATTATGTGGGAGCTGCA.....................................................................................................................................................................2315.0050041
....................................................................................................................................................TAGCACCACATGATTCGGT...............................................................................................................1914.0042002
....................................................................................................................................................TAGCACCACATGATTCGGCTTCA...........................................................................................................2314.0041030
....................................................................................................................................................TAGCACCACATGATTCGGCTAAA...........................................................................................................2314.0041120
....................................................................................................................................................TAGCACCACATGATTCGGCTTTAA..........................................................................................................2414.0043001
....................................................................................................................................................TAGCACCACATGATTCGGCTGT............................................................................................................2214.0044000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTTA..........................................................................................................2413.0031200
........................................................................................CAGCCCGAATTATGTGGGAGCTGC......................................................................................................................................................................2413.0030021
....................................................................................................................................................TAGCACCACATGATTCGGA...............................................................................................................1913.0032100
..........................................................................................GCCCGAATTATGTGGGAGCTGCGA----................................................................................................................................................................2413.0030210
....................................................................................................................................................TAGCACCACATGATTCGGCTTAC...........................................................................................................2313.0033000
...................................................................................................................................................GTAGCACCACATGATTCG.................................................................................................................1812.0020020
...........................................................................................CCCGAATTATGTGGGAGCTGCGA----................................................................................................................................................................2312.0021001
.....................................................................................................................................................AGCACCACATGATTCGGCTTG............................................................................................................2112.0022000
....................................................................................................................................................TAGCACCACATGATTCGGCAA.............................................................................................................2112.0020020
.....................................................................................................................................................AGCACCACATGATTCGGCTTAA...........................................................................................................2212.0022000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTC...........................................................................................................2312.0021001
..........................................................................................GCCCGAATTATGTGGGAGCTGCAA----................................................................................................................................................................2412.0021010
...................................................................................................................................................GTAGCACCACATGATTCGGCTTT............................................................................................................2312.0022000
.....................................................................................................................................................AGCACCACATGATTCGGCTA.............................................................................................................2012.0022000
...........................................................................................CCCGAATTATGTGGGAGCTGCGC----CG..............................................................................................................................................................2512.0021010
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................2012.0021001
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................2212.0021100
...................................................................................................................................................GTAGCACCACATGATTCGGCT..............................................................................................................2112.0021010
....................................................................................................................................................TAGCACCACATGATTCGGCTTATA..........................................................................................................2411.0010010
...........................................................................................CCCGAATTATGTGGGAGCTG.......................................................................................................................................................................2011.0011000
....................................................................................................................................................TAGCACCACATGATTCGGCTGA............................................................................................................2211.0011000
..........................................................................................GCCCGAATTATGTGGGAGCTGCGT----T...............................................................................................................................................................2511.0010010
...........................................................................................CCCGAATTATGTGGGAGCTGCGT----TT..............................................................................................................................................................2511.0010001
....................................................................................................................................................TAGCACCACATGATTCGGAA..............................................................................................................2011.0010100
........................................................................................CAGCCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................2511.0010010
................................................................................................................................................TCCGTAGCACCACATGATTCGGCTT.............................................................................................................2511.0011000
....................................................................................................................................................TAGCACCACATGATTCGGCTATT...........................................................................................................2311.0010001
...........................................................................................CCCGAATTATGTGGGAGCTGCGG----................................................................................................................................................................2311.0010001
....................................................................................................................................................TAGCACCACATGATTCGGCTTGT...........................................................................................................2311.0010001
..........................................................................................GCCCGAATTATGTGGGAGCT........................................................................................................................................................................2011.0011000
..........................................................................................................................................AG----TCCGTAGCACCACATGATTCG.................................................................................................................2311.0010010
....................................................................................................................................................TAGCACCACATGATTCGTT...............................................................................................................1911.0010001
....................................................................................................................................................TAGCACCACATGATTCGGAGA.............................................................................................................2111.0010100
.....................................................................................................................................................AGCACCACATGATTCGGCTC.............................................................................................................2011.0011000
....................................................................................................................................................TAGCACCACATGATTCGGCG..............................................................................................................2011.0011000
........................................................................................................................................GAAG----TCCGTAGCACCACATGATT...................................................................................................................2311.0011000
.....................................................................................................................................................AGCACCACATGATTCGGCTTCT...........................................................................................................2211.0011000
....................................................................................................................................................TAGCACCACATGATTCGGCCC.............................................................................................................2111.0010010
..........................................................................................GCCCGAATTATGTGGGAGCTGTT.....................................................................................................................................................................2311.0011000
........................................................................................CAGCCCGAATTATGTGGGAGCTG.......................................................................................................................................................................2311.0010010
droYak3
G------------T-TGCCA-----------TCCTGGATTAAACTCATTCAC--------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----CGTTT---------C--TAAAA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAT--------------CAGC------------AATTTTT--GGTAGC----CAA-----------------T---------C----GTTATCTA--SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................211150883.001508832180516107107850166810971559521361819131
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................2117681.0076812837737554700000
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................2015921.005921696585420316491115601060
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................2213830.0038305547152376364583142050
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................2211207.001207981818931441070000
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................2011099.001099120197701000000
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................2011006.00100639039710001010
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................211555.00555235131611578800000
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................211488.004886064345123400000
..........................................................................................GCCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................231475.004750393744421240000
....................................................................................................................................................TAGCACCACATGATTCGGCTTC............................................................................................................221444.004443233362321020000
..........................................................................................GCCCGAATTATGTGGGAGCTGC......................................................................................................................................................................221265.00265020193338920000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAA...........................................................................................................231243.0024315318340110000
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................191190.00190452210971311010
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................231108.0010817236102110120
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................22181.008123232810510000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAAA..........................................................................................................24176.00761254910000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTA...........................................................................................................23165.006513143600110000
..........................................................................................GCCCGAATTATGTGGGAGCTG.......................................................................................................................................................................21163.00631124313210000
...........................................................................................CCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................22158.00580242440400020
.....................................................................................................................................................AGCACCACATGATTCGGCTTT............................................................................................................21151.0051146400000000
......................................................................................................................................................GCACCACATGATTCGGCTT.............................................................................................................19148.00480351102000000
...................................................................................................................................................GTAGCACCACATGATTCGGCTT.............................................................................................................22147.00471271900000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAT...........................................................................................................23142.00422241410010000
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................19138.0038034400000000
...........................................................................................CCCGAATTATGTGGGAGCTGCGC----................................................................................................................................................................23135.0035032730010010
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................22123.0023171500000000
.......................................................................................................................................................CACCACATGATTCGGCTT.............................................................................................................18123.00231121000000000
....................................................................................................................................................TAGCACCACATGATTCGGCCC.............................................................................................................21121.0021401700000000
...........................................................................................CCCGAATTATGTGGGAGCTGC......................................................................................................................................................................21120.0020021220130000
....................................................................................................................................................TAGCACCACATGATTCGGCTGT............................................................................................................22120.0020303041000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTAA..........................................................................................................24118.001819800000000
.....................................................................................................................................................AGCACCACATGATTCGGCTTA............................................................................................................21115.0015013200000000
...................................................................................................................................................GTAGCACCACATGATTCGGCT..............................................................................................................21114.0014101020100000
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................20114.0014021200000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGG............................................................................................................22113.001380002300000
....................................................................................................................................................TAGCACCACATGATTCGGCTAAA...........................................................................................................23112.0012021000000000
....................................................................................................................................................TAGCACCACATGATTCGGCG..............................................................................................................20211.0022201100000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTAC...........................................................................................................23110.001003700000000
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................18110.001005121010000
....................................................................................................................................................TAGCACCACATGATTCGGCTTCT...........................................................................................................2319.00913500000000
....................................................................................................................................................TAGCACCACATGATTCGGAC..............................................................................................................2018.00810700000000
....................................................................................................................................................TAGCACCACATGATTC..................................................................................................................1618.00800000001070
..........................................................................................GCCCGAATTATGTGGGAGC.........................................................................................................................................................................1918.00800800000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCT.....................................................................................................................................................................2318.00800600020000
.....................................................................................................................................................AGCACCACATGATTCGGCTC.............................................................................................................2017.00700700000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCGT----................................................................................................................................................................2416.00602200200000
....................................................................................................................................................TAGCACCACATGATTCGGCAA.............................................................................................................2116.00612201000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTCG...........................................................................................................2316.00631000200000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTC...........................................................................................................2316.00602300100000
....................................................................................................................................................TAGCACCACATGATTCGGCAC.............................................................................................................2115.00501400000000
...........................................................................................CCCGAATTATGTGGGAGCTG.......................................................................................................................................................................2015.00502300000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCC.....................................................................................................................................................................2315.00500500000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCA.....................................................................................................................................................................2315.00500410000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCGA----................................................................................................................................................................2414.00401120000000
.....................................................................................................................................................AGCACCACATGATTCGGCTTAA...........................................................................................................2214.00404000000000
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................2214.00421000100000
droEre2
G------------AATGT---------------------------CATTCAC--------------------------CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGC----TGTTT---------T--CAGGA----TCCGTAGCACCACATGATTCGGCTTCGTGGTGCAGGACAT--------------CAGC------------GGTTTTT--GCTAGA----CAA-----------------C---------G----GTTATCTA--SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
....................................................................................................................................................TAGCACCACATGATTCGGCTT.............................................................................................................21144981.004498128559831610005261996455628
....................................................................................................................................................TAGCACCACATGATTCGGCT..............................................................................................................2012879.002879132533891572837850
....................................................................................................................................................TAGCACCACATGATTCGGCTTT............................................................................................................2211529.0015291128954912791660
.....................................................................................................................................................AGCACCACATGATTCGGCTT.............................................................................................................2011301.00130112781210190
....................................................................................................................................................TAGCACCACATGATTCGGCTTA............................................................................................................221580.005804404710234470
....................................................................................................................................................TAGCACCACATGATTCGGCTG.............................................................................................................211538.005382221745132140
....................................................................................................................................................TAGCACCACATGATTCGGCTC.............................................................................................................211481.004811245942220
..........................................................................................GCCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................231177.001774721121220650
..........................................................................................GCCCGAATTATGTGGGAGCTGC......................................................................................................................................................................221176.001761415910211070
....................................................................................................................................................TAGCACCACATGATTCGGCTTAA...........................................................................................................231170.001701531101230
....................................................................................................................................................TAGCACCACATGATTCGGCTA.............................................................................................................211150.0015011619203100
....................................................................................................................................................TAGCACCACATGATTCGGCTTC............................................................................................................221122.001227019768120
....................................................................................................................................................TAGCACCACATGATTCGGC...............................................................................................................191121.001215711406430
....................................................................................................................................................TAGCACCACATGATTCGGCTTG............................................................................................................221112.00112723402310
....................................................................................................................................................TAGCACCACATGATTCGGCTTAAA..........................................................................................................241108.00108103400010
....................................................................................................................................................TAGCACCACATGATTCGGCTTTT...........................................................................................................23176.007660331450
.....................................................................................................................................................AGCACCACATGATTCGGCT..............................................................................................................19166.006664100010
..........................................................................................GCCCGAATTATGTGGGAGCTG.......................................................................................................................................................................21164.006443211890
....................................................................................................................................................TAGCACCACATGATTCGGCC..............................................................................................................20159.005905700110
.....................................................................................................................................................AGCACCACATGATTCGGCTTT............................................................................................................21158.005857010000
......................................................................................................................................................GCACCACATGATTCGGCTT.............................................................................................................19156.005648401210
....................................................................................................................................................TAGCACCACATGATTCGGCTTAT...........................................................................................................23147.004743010120
...........................................................................................CCCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................22140.0040151318120
....................................................................................................................................................TAGCACCACATGATTCGG................................................................................................................18138.003870202270
...................................................................................................................................................GTAGCACCACATGATTCGGCTT.............................................................................................................22132.003232000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCGT----................................................................................................................................................................24126.00266010739
....................................................................................................................................................TAGCACCACATGATTCGGCTTTA...........................................................................................................23123.002316300310
.....................................................................................................................................................AGCACCACATGATTCGGCTTA............................................................................................................21116.001616000000
....................................................................................................................................................TAGCACCACATGATTCGGCTGT............................................................................................................22112.001210110000
...........................................................................................CCCGAATTATGTGGGAGCTGC......................................................................................................................................................................21112.00121101360
....................................................................................................................................................TAGCACCACATGATTCGGCTAA............................................................................................................22110.001010000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTAA..........................................................................................................2419.0099000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTGT...........................................................................................................2319.0098000100
....................................................................................................................................................TAGCACCACATGATTCGGCTTCT...........................................................................................................2319.0096001110
.......................................................................................................................................................CACCACATGATTCGGCTT.............................................................................................................1817.0076000010
....................................................................................................................................................TAGCACCACATGATTCGGCTTCA...........................................................................................................2317.0074000120
....................................................................................................................................................TAGCACCACATGATTCGGCTTTC...........................................................................................................2316.0066000000
....................................................................................................................................................TAGCACCACATGATTCGGCTAT............................................................................................................2216.0066000000
.....................................................................................................................................................AGCACCACATGATTCGGCTTAAA..........................................................................................................2316.0066000000
...........................................................................................CCCGAATTATGTGGGAGCTG.......................................................................................................................................................................2015.0055000000
....................................................................................................................................................TAGCACCACATGATTCGGCGG.............................................................................................................2115.0055000000
..........................................................................................GCCCGAATTATGTGGGAGCTGA......................................................................................................................................................................2214.0041100020
....................................................................................................................................................TAGCACCACATGATTCGGCTTCG...........................................................................................................2314.0040100030
....................................................................................................................................................TAGCACCACATGATTCGGCTTAC...........................................................................................................2314.0044000000
...........................................................................................CCCGAATTATGTGGGAGCTGCGC----................................................................................................................................................................2314.0041300000
.....................................................................................................................................................AGCACCACATGATTCGGCTTAA...........................................................................................................2214.0044000000
.....................................................................................................................................................AGCACCACATGATTCGGCTA.............................................................................................................2014.0044000000
....................................................................................................................................................TAGCACCACATGATTCGGCA..............................................................................................................2013.0031001100
....................................................................................................................................................TAGCACCACATGATTCGGCTTCAA..........................................................................................................2413.0033000000
....................................................................................................................................................TAGCACCACATGATTCGGCTAAA...........................................................................................................2313.0033000000
....................................................................................................................................................TAGCACCACATGATTCGGCAA.............................................................................................................2113.0033000000
.....................................................................................................................................................AGCACCACATGATTCGGCTTTT...........................................................................................................2213.0033000000
....................................................................................................................................................TAGCACCACATGATTCGGCTTTAG..........................................................................................................2413.0032000100
.....................................................................................................................................................AGCACCACATGATTCGGCTG.............................................................................................................2013.0033000000
.....................................................................................................................................................AGCACCACATGATTCGGCTTC............................................................................................................2112.0022000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCT.....................................................................................................................................................................2312.0020100100
....................................................................................................................................................TAGCACCACATGATTCGGCTTGA...........................................................................................................2312.0022000000
....................................................................................................................................................TAGCACCACATGATTCGGCCC.............................................................................................................2112.0020101000
....................................................................................................................................................TAGCACCACATGATTCGGCTGA............................................................................................................2212.0022000000
..........................................................................................GCCCGAATTATGTGGGAGCTGCGC----................................................................................................................................................................2412.0022000000
............................................................................................CCGAATTATGTGGGAGCTGCG.....................................................................................................................................................................2112.0022000000
....................................................................................................................................................TAGCACCACATGATTCGCT...............................................................................................................1912.0020000020
.....................................................................................................................................................AGCACCACATGATTCGGCA..............................................................................................................1912.0022000000
.................................................................................................................................................................TTCGGCTTCGTGGTGCAGGAC................................................................................................2112.0020000200
.....................................................................................................................................................AGCACCACATGATTCGGC...............................................................................................................1812.0022000000
...................................................................................................................................................GTAGCACCACATGATTCGGCTTT............................................................................................................2312.0022000000
....................................................................................................................................................TAGCACCACATGATTCTT................................................................................................................1851.4075000020

Generated: 10/20/2015 at 07:00 PM