ID:

dwi_3881

 Coordinate:

scf2_1100000004961:2452716-2452866 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.2 -20.0 -20.0

Flybase annnotation

CDS [Dwil\GK23444-cds]; exon [dwil_GLEANR_6937:2]; intron [Dwil\GK23444-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron-
mature
  1. scf2_1100000001484:382-405 +
  2. scf2_1100000003032:2451-2474 +
  3. scf2_1100000002184:1061-1084 +
  4. scf2_1100000004389:3660-3683 +
  5. scf2_1100000004620:12034-12057 +
  6. scf2_1100000004657:2413-2436 +
  7. scf2_1100000004943:7789634-7789657 +
  8. scf2_1100000004909:760199-760222 +
  9. scf2_1100000004909:10161285-10161308 +
  10. scf2_1100000014922:628-651 +
  11. scf2_1100000004954:3806672-3806695 +
  12. dwi_3881  scf2_1100000004961:2452745-2452768 +
  13. scf2_1100000004961:4761107-4761130 +
  14. scf2_1100000004965:22516-22539 +
  15. scf2_1100000004967:586226-586249 +
  16. scf2_1100000004967:2213934-2213957 +
  17. scf2_1100000004968:2111777-2111800 +
  18. scf2_1100000004968:2693494-2693517 +
  19. scf2_1100000004968:2736041-2736064 +
  20. scf2_1100000012618:526-549 +
  21. scf2_1100000010459:693-716 +
  22. scf2_1100000002688:814-837 +
  23. scf2_1100000001297:558-581 +
  24. scf2_1100000011584:418-441 +
  25. scf2_1100000006443:466-489 +
  26. scf2_1100000006453:563-586 +
  27. scf2_1100000004382:613001-613024 +
  28. scf2_1100000004440:1288-1311 +
  29. scf2_1100000004513:2943937-2943960 +
  30. scf2_1100000004521:698267-698290 +
  31. scf2_1100000004577:358973-358996 +
  32. scf2_1100000004585:781069-781092 +
  33. scf2_1100000004884:616074-616097 +
  34. scf2_1100000004943:877076-877099 +
  35. scf2_1100000004943:4459376-4459399 +
  36. scf2_1100000004921:253375-253398 +
  37. scf2_1100000004961:1508477-1508500 +
  38. scf2_1100000004961:3893336-3893359 +
  39. scf2_1100000004963:3392992-3393015 +
  40. scf2_1100000000472:679-702 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACGGACATGGCTATATCAACTCAGCTTCTCATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGTCTTCTTCTGTGCGTTACAAACATCTGACCAATTTTATAAATTGAAAATCCACTAGGTCAAACCAAATTGAAATAATTTTTAAAATTTTTGTCACCCTGTGTAACAAAAAATTTTTTTTACCTTAACAGTCTGGTTACTTGGATGTTGTTGTGCCGCCGGATATCCTTAATCACCCTGA
**************************************************........(((((((((((........)))))...((((((......((((.(((((((.((((((.....((....))((((......))))..)))))).)))))))...)))).....))))))..............))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
...........................................................................................................................................................................................................TGGTTACTTGGATGTTGTTGTGCCGC...................... 26 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................................................................................GTTGTGCCGCCTGATACC.............. 18 2 3 0.33 1 1 0 0 0
...............................................................................CTGTGCGTTACAAACATCTGACCA.................................................................................................................................................... 24 0 20 0.20 4 4 0 0 0
..................................................................................TGCGTTACAAACATCTGACCAATTTTAT............................................................................................................................................. 28 0 20 0.10 2 2 0 0 0
GACGGACATGGCTATATCAACTCAGC................................................................................................................................................................................................................................. 26 0 20 0.10 2 0 0 0 2
...................................................TACTTTATGGGGTCGGAAACGTCTT............................................................................................................................................................................... 25 0 20 0.10 2 0 2 0 0
..........................................................................................................................................................................................................CAGGTTACTTGGAAGGTGT.............................. 19 3 15 0.07 1 0 1 0 0
.............................................................................................................................................................................................................GTTACTTGGATACTGTGGT........................... 19 3 19 0.05 1 0 0 1 0
..........................................................TGGGGTCGGAAACGTCTTCTTCTGTG....................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
............................CTCATGCTGATCAAGAATATATATACTT................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0
...................................................................AAACGTCTTCTTCTGTGCGTT................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0
.....................................................CTTTATGGGGTCGGAAACGTCTT............................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
.......................................................TTATGGGGTCGGAAACGTCTT............................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0
......................................................................................................................................................................................................................ATGCTGGTATGCCGCCGG................... 18 3 20 0.05 1 0 1 0 0
.....ACATGGCTATATCAACTCAGCTTCTCA........................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
.......ATGGCTATATCAACTCAGC................................................................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

CTGCCTGTACCGATATAGTTGAGTCGAAGAGTACGACTAGTTCTTATATATATGAAATACCCCAGCCTTTGCAGAAGAAGACACGCAATGTTTGTAGACTGGTTAAAATATTTAACTTTTAGGTGATCCAGTTTGGTTTAACTTTATTAAAAATTTTAAAAACAGTGGGACACATTGTTTTTTAAAAAAAATGGAATTGTCAGACCAATGAACCTACAACAACACGGCGGCCTATAGGAATTAGTGGGACT
**************************************************........(((((((((((........)))))...((((((......((((.(((((((.((((((.....((....))((((......))))..)))))).)))))))...)))).....))))))..............))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body		 V119
head
...............................................................................................................................CCAGTTTGGTTTAGCTTT.......................................................................................................... 18 1 5 0.60 3 0 0 3 0 0
.........................................................................................................................................................................................................................................ATAGGAATGAGTGGGAAT 18 2 4 0.25 1 1 0 0 0 0
........................CGAAGAGTACGACTAGTTCTT.............................................................................................................................................................................................................. 21 0 20 0.25 5 0 5 0 0 0
........................................................................................................................................................................................AAAAAAATGGATTTGTCGCACC............................................. 22 3 6 0.17 1 1 0 0 0 0
...........................AGAGTACGACTAGTTCTTATAT.......................................................................................................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0
....................................................................TTGCAGAAGAAGACACGCAATGTT............................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
.....................................................GAAATACCCCAGCCTTTGCA.................................................................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0
........................................................................................TGTTTGTAGACTGGTTAAAATA............................................................................................................................................. 22 0 20 0.10 2 0 0 0 2 0
........................................................................................TGTTTGTAGACTGGTTAAAATATTT.......................................................................................................................................... 25 0 15 0.07 1 0 1 0 0 0
.....................................................................TGCAGAAGAAGACACGCAATGTT............................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
................................................................................ACACGCAATGTTTGTAGACTG...................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1
.................................................................CCTTTGCAGAAGAAGACACGCAATGTT............................................................................................................................................................... 27 0 20 0.05 1 0 0 0 1 0
..................................................................CTTTGCAGAAGAAGACACGCAATGTT............................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
....................................................................TTGCAGAAGGAGACACTCAATGTT............................................................................................................................................................... 24 2 20 0.05 1 0 1 0 0 0
.........................................................................................GTTTGTAGACTGGTTAAAATAT............................................................................................................................................ 22 0 20 0.05 1 0 1 0 0 0
............ATATAGTTGAGTCGAAGAGTA.......................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1
..........................................................................................TTTGTAGACTGGTTAAAAT.............................................................................................................................................. 19 0 20 0.05 1 0 1 0 0 0
.........................................................TACCCCAGCCTTTGCAGAAGAAGACAC....................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
......................................................................GCAGAAGAAGACACGCAATGTTTGT............................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004961:2452666-2452916 + dwi_3881 GACGGACA--TGGCTATATCAACTCAGCTTCTCATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGTCTTCTTCTGTGCGTTACAAACATCTGACCAAT---TTTAT---A---------AATTGAAAATCCACT----------------------------A------GGTCAAA------------------CCAAA-TTGAAATAATTTT----------------------------------------------------------------TAAAATTTT--------------------------------------------------------------------------TG--TCACCCTGTGTAA--------------------------------------------------------------------------------------------------------------------------CAAAAAATTTTTTTT--A------------------------------------------------------------------CCTTAACAGTCTGGTT----------ACTTGGATGTTGTTGTGCCGCCG-------------------G-----------ATA-----TC-CTTAATC--------ACCCTGA
droVir3 scaffold_12958:1015252-1015458 - GACGGACG--TGGCTAGATCGACTTGGCTATTGGTGCTGATCAAGAATATATATACTTTAAGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACATTTGG----AT--TTTGTA-CA---------TATACAATATACCCT----------------------------AATACCA----------------------------AAGACAATATAAACACTAAGATGAG-------TAACGCCAT---------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA-------------------------------------------------------CAAA-------------------------------------------------------------------------------------------------------------ATGCTACTATGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAATTG--------
droMoj3 scaffold_6496:5643801-5644089 + GACGGACA--GGGCCAAATCAACTCAGCTCGTCACCCTGATCAAGAATATATATACTTTGTGGGGTCTGCCACGCCTCCTTCTGCCTGTTACATACATTT-------------CAA-CA---------AAACCATTATACCCT----------------------------GATTTCC---------------------------------------------------CA----------------------------------TTGAAAATGGGTTCAGGGTATAAAAATTAA--------------------------------------------------------------------------AAAAAAACTTAAG----AAAT--------------------AAAATATTT------------------------------------TAAAATGAAATATCTTGTATATAAATATAAAATATTTTTG-----------------------------------------TGAATTTTTTAAATTTTTCGT--------------------TGC-----TTTAATGTTTTTATACA---TT---TATTAGA--------------------------------------------------------CA-----CT-CTTTCTC--------ACCCT--
droGri2 scaffold_14624:925607-925857 + AATAAACT--TGATTAGATCGACTCTATTATTGATGCTGATCAAGAATATATATTCATTATGGTTTCGCACTTGCTTCCTTCTTCATGCTATAGTCCACT-------------CAG-ATATTCTCACATATTCAGAAAACCTA----------------------------AATA------------------------------------------------------------------AAATAAAAAAA-----TAAAAAATTGCTTAATT------------------------------------TGTAGCACCTG------T------------------------------------------A--TTATTGCA---------------------------------------------------------TATGGCAGCACTTTA-C------------------------------------------------------TTA--------------------------------------------------------------------CCCACTTTTCCAG----------------------------T----------------------GCTTACCTAAGTGTTGCTGCACTGAGGCATG-----CC------------------CTAAA
dp5 Unknown_group_13:76676-76906 + GACAGACA--TGGCCTAATCGACTCCGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAAAGATTCCTTCTGGACGTTACACACATAGAC----TT--TTAGCA-CA---------AATCTAACATCCCAC----------------------------A------GCTTAAAAGCTTAGCTTATTAACAACTAA---AGAACCGATTTTCAATC--CTCCCAC--CATAAGTA---------------------------------------AAGAAAAT-----------------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTT--TCCTAACTTTCCAC-----------------T--------------------TGC----------------------------------------------------------------------ATT-------------------------------------AAAGCTG--------
droPer2 scaffold_4156:640-881 + GACAGACA--TGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTTTGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCAC----TT--TTACCA-CA---------AATCTAATATACCCC----------------------------AATACTC----------------------------A-------------T--------TT----------------------------------TGAGTATCGGG-------TATAAAAATTGC--------------------------------------------------------------------------AG--TCACCCAAG----AAATTTCGGTATTGTTATTTAGAAAAACTATTC------------------------------------TAAAATTTCAT----------------------------------------------------------------------------------------------------GGC-----------------------------------------------GC------------------CCCCGGGTGG----ACT--------TG----------------------------------CAATTTAA
droAna3 scaffold_13082:3766011-3766243 + GACGGACA--TGCTTATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTACAGGGTCGGAGATGTATCCTTCACTGCGTTGCCCACTTTT-------------TTA-------------AATTATAT----------------------------------A------GGGTATA------------------TAAAA-T-------------------TA-------TAAGGGTAT---------------------------------------AAAAATGTATATTTCTGATCTGTGT---TT------G-----------AAAA-------CCT-----------------------------TTCT----------------------------------------------------------------------------------TAT----------------------------------------------------------------------------------------------------GGG----------------------GCCTTAATTGTC---CT----------TCTTGGGT------------------GATTGTTTAAACGCTAA-----------AAATTTAATT------------------CTTAA
droBip1 scf7180000394867:1684-1919 - GACGGACA--TGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACCGCGTTGCACACTTTT-------------GGAAAA---------AAAGTATAATACCCT----------------------------C---------------------------------------------------------TG-------CAAGGGTAT---------------------------------------AATAAAT-----------------TTTGGTGGTTA------TAATTAT--------------------------------------------ATA---------------------------------------------------------TATATAAATTTATAA-T------------------------------------------------------AAA--------------------------------------------------------------------TTTATTTTTTTGGTTGAAGTTA---GT---TGTTACGC------------------AGCCG-------------------G-----------TTAT--G-CC--GTCGGC--------ACCCTGT
droKik1 scf7180000302258:63849-64076 - GACGGACA--TGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTCT-------------GAC-TG---------AAATTATAATACCCT---------------------------------------------------------------------------------------G-------CAAGGGTATAAAAA-----TATTAAATCATCTATTC-----------------------------------------------------------------------------------------------AA--TAGCCCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------TGA-----------------CTTTTTTTTTTGTTAGGCTCTTGA----------------------------------------------------------------------CTTAATGCCGCAATACCGCAACTCA-----TT-CTTGGCC--------ACATTAC
droFic1 scf7180000453831:331722-331944 - GACGTACA--GACGGATTTCGATTCTGCTCGTGATGCTGATCAAGAATATATATACTATATGGGGTCTGAGGTGTCTCCTTCACTGCGTTGCAAACTTCT-------------GAC-TG---------AAATTATAATACCCT----------------------------TTTGCTC---------------------------------------------------TG-------CAAGGGTAT---------------------------------------AAAAATCGTTGTT----------------------------------------------------------------------------ATTCAGTAGAC--------------------------------------------------------------------------------------------------------------------------AAGCAAAGTTTTATG--A------------------------------------------------------------------ATATAGAATCCTAACA----------TCTTCGATGTTGTT-------------------TAGCCTTTAA-----------GTAT-----T-------------TT--------
droEle1 scf7180000491211:529075-529320 + ------CA--TGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATATACTTTATACGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTCT-------------GAC-TG---------AAATTATAATAACCT----------------------------C---------------------------------------------------------TG-------CAAGGGTATAAAAAGAAATTGTTAAATTGAGTAATGGG-------TATCA-------------------CTTG---GC------ACTTT------TACAATTCAAAAGGT-----------------------------TTCCTGTTT--------------------------------------------------T-----------------A------------------------------------------------------AAC-AAGTTA--------------------------------------------------------------------------------------TTT------ACAT----AGTCATTTTTCCA-----------------T--------TG------------A--A-ATCGGTAATC--------ACAGTGA
droRho1 scf7180000779262:67310-67541 - GACGGACA--TGGCTATATCGACTCCCCTATTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTACAAACTTCT-------------GAC-CA---------AAATTATAATACAAT----------------------------C---------------------------------------------------------TG-------CAAGGGTAT---------------------------------------AAAAATTAAT--------------TTTGGAAATCGTA-----------AAAA-------TCT----------------------T--CAATTATC--------------------------------------TACAGATTTTCC----------------------------------------------------------------------------------------------TATTAATTTTCGGA-----------------TTTTTTATG-----------------------T-------------------------------------------------------CGGTATGTAAACATTGA-----------ATAT-----C------------------TTTGA
droBia1 scf7180000302379:28556-28771 - GACGGACA--TGGCTAGATCGACTCGTCTAGTGATGCTTATCAAGAATATATATA-TTAATGGGGTCGGAAACGTCCCCTTCACTGCGTTGCAAACTTCT-------------GAC-TG---------AAATCAATATAACCT----------------------------T---------------------------------------------------------TG-------CAAGGGTAT---------------------------------------AAAAATGAACGTG-------ACTTT---GT------GCTTTTATTTGTACAAA-------TA-----------------------------------TAA------------------------------------------------------------------A-A------------------------------------------------------AAA-AAGTTATTTTATTAATAATTTTGCGA-----------------TATATTTTG-------------------------------------------------------------------------------------------------------------------------------TTGTG--------
droTak1 scf7180000414052:54980-55228 - GACGGACA--TGGCTAGATCGACTCGTCTAGTGATGCTGATCAAGAATATATATACTTTATGTGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACATCTGAATTAT-AATTTAT---G---------AATTATGAATAAAATATTTAAAAAATCGGGACACTATATCATATAGCTGC---------------------------------------------------CA----TTGGAACG--A---------------------------------------TCGAAAAT-----------------TA-------------AA------TGCAAATTAATAGG---A-------------------------------------------------------------------------------------------------------AAAAA-----------------------------ATG------------------------------------------------------------------------------------------------------------------ATTGC------TT----CGTTGTTTTTTTA-----------------T--------TG------------T--A-TTC-TCGTTA-ACTCTG--------
droEug1 scf7180000409904:18451-18692 + TACGGACA--TGGCTCAATCGTCTTCGCTATTCATCCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTTTCCTTCTACCTGTTACATAATTTT-------------CAA-CG---------AATCTAATGTACCCT----------------------------TTTACTC---------------------------------------------------TA----------------------------------CGAGTAACGGG-------AATAAAAAGT-----------------TCTCGATATATA------------ACATATTAT---------------------------A--TAACAATC--------------------------------------AATGGTTTTTATTATTACACCCGA-------TTA-------------------------------------------------------CCAT-------------------------------------------------------------------------------------------------------------TTGGTTTTATCGAATTTCAG-------------------G-----------TTT-----T--------TATTAATC--------
dm3 chr3LHet:2278387-2278579 - GACGGACG--TGGCTAGATCGACTCGGCTATTGATCCTGATGAAGAATATATATACTTTATATGGTCGGAAACGCTTCCTTTTGACTGTTAAAAACTTTT-------------CAA-CG---------T-----------TTT----------------------------C---------------------------------------------------------TG-------GCAGTGTAT--------------------------------------------------------------------------G------------CCAGATTAA---------------------------A--TTAA-----------------------------------------------------------------------------ATTAA-----------------------------ATGTTTGTTCCTTTGTTAAATTAATAATTCCTTTT--T------------------------------------------------------------------------------------------------------------C-----------------T--------TA------------T--A-TTT-T----GATCATTT--------
droSim2 x:20646833-20647004 + -ACGGACA--TGACTAGATGGACTCGGCTATTGATCATCATCAATAATATATATACTTCATATGGTCGGAAACGTTTCCTTCTGCCTGTTACATACTTTT-------------TCA-CA---------AATCTAGTATACTCT----------------------------AAAA------------------------------AAT-CTGAGTTGCCTC--------TT-------TAAGTAT-------------------------------------------------T--------------------------------------------------------------------------TA--CTACTATTTAGAA--------------------------------------------------------------------------------------------------------------------------ATATAAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------
droSec2 scaffold_8:2123890-2124116 + GCCGGACATATGGCCAGATCGACTCGACTAGCGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACGATTGCTTCTGCCTGTTACATACGTAT-------------CAA-CA---------AATCTAGTATAACCT----------------------------TTCACTC---------------------------------------------------TT----------------------------------CGAGTAACGGG-------TATAGATATGTTTG------------------------------------TATAATTTAT---------------------------A--TAACAATGTATTA--------------------------------------------------CAACAAA-------TTAACTTAA-----------------------------ATG--------------------------------------------------------------------------------------------------------------A----TCGC------TTCTGTGAGT------------------AA----TAT--------TG----------------------------------TGTTGTTG
droYak3 3L:16267241-16267464 + GACGGACA--TGGCCAGATCGACTCGGCTATTGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTACATACTTTT-------------CAA-CG---------AATCTAGTATACCCT----------------------------TTTACTC---------------------------------------------------TA----------------------------------CGAGTAACGGG-------TAAAAAAACCTATGCT-------AGTTT---GT------G-----------ACAA-------CCT-----------------------------------------------------------------------------------------------------TTAA-C------------------------------------------------------AAA--------------------------------------------------------------------CACTTCTTTCGGCCTGAAGGGGC-------------------------------------------------------TGA-----------ATAT--A-TTT-T----GTACTTT----TTTGT
droEre2 scaffold_4845:2507840-2508055 - GACGGACA--TGACCAGATCGACTCGGCTATTGATCCTGATCAAGAATATATATTATTTATATGGTCGGGAACGCTTTCTTCTGACTGTTACATACTTTT-------------CAAGAA---------AATCTAAGATTTCGT----------------------------TG------------------------------------------------------------------AACAGTAT---------------------GTAACAGG-------A----GGAT-----------------------------G------------CCAAA-------TAGCAAATAAATTGTTTATTTTTTG--TAGTCGTTTTTAA----------------------TAACAAGATTC------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------T--------C----------------------------AAAGTTGCCTTAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GACGGACA--TGGCTATATCAACTCAGCTTCTCATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGTCTTCTTCTGTGCGTTACAAACATCTGACCAAT---TTTAT---A---------AATTGAAAATCCACT----------------------------A------GGTCAAA------------------CCAAA-TTGAAATAATTTT----------------------------------------------------------------TAAAATTTT--------------------------------------------------------------------------TG--TCACCCTGTGTAA--------------------------------------------------------------------------------------------------------------------------CAAAAAATTTTTTTT--A------------------------------------------------------------------CCTTAACAGTCTGGTT----------ACTTGGATGTTGTTGTGCCGCCG-------------------G-----------ATA-----TC-CTTAATC--------ACCCTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTT----------ACTTGGATGTTGTTGTGCCGC..................................................................2611.00101000
.................................................................................CTGTGCGTTACAAACATCTGACCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.20404000
....................................................................................TGCGTTACAAACATCTGACCAAT---TTTAT---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.10202000
GACGGACA--TGGCTATATCAACTCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10220000
.....................................................TACTTTATGGGGTCGGAAACGTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200020
............................................................TGGGGTCGGAAACGTCTTCTTCTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
..............................CTCATGCTGATCAAGAATATATATACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.....................................................................AAACGTCTTCTTCTGTGCGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100
.......................................................CTTTATGGGGTCGGAAACGTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.........................................................TTATGGGGTCGGAAACGTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.....ACA--TGGCTATATCAACTCAGCTTCTCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.......A--TGGCTATATCAACTCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
droVir3
GACGGACG--TGGCTAGATCGACTTGGCTATTGGTGCTGATCAAGAATATATATACTTTAAGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACATTTGG----AT--TTTGTA-CA---------TATACAATATACCCT----------------------------AATACCA----------------------------AAGACAATATAAACACTAAGATGAG-------TAACGCCAT---------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA-------------------------------------------------------CAAA-------------------------------------------------------------------------------------------------------------ATGCTACTATGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAATTG--------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................TAAACACTAAGATGAG-------TAACGCCAT---------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C..............................................................................................................................................................................................................................................................2724.008002010000000000000000001000000010000010200000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAATT.........23201.60320000000000000000000000000032000000000000000000000000000000000000
.............................................................................................TACATTTGG----AT--TTTGTA-CA---------TATACAATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2821.002000000000000000000000000010000000010000000000000000000000000000
.............................................................................................TACATTTGG----AT--TTTGTA-CA---------TATACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.002001000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................TAAACACTAAGATGAG-------TAACGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.95190000180000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTATGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAAT..........27200.60120000020000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................CTAAGATGAG-------TAACGCCAT---------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA-------------------------------------------------------CAAA-------------------------------------------------------------------------------------------------------------A...................................................................................2820.501000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................AACACTAAGATGAG-------TAACGCCAT---------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C..............................................................................................................................................................................................................................................................2520.501000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................TAAGATGAG-------TAACGCCAT---------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA-------------------------------------------------------CAAA-------------------------------------------------------------------------------------------------------------A...................................................................................2720.501000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................AAACACTAAGATGAG-------TAACGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.306005000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................TAAACACTAAGATGAG-------TAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.255000000000000000000000000000000003000000200000000000000000000000
.........................................................................................................................................................................................................................AACACTAAGATGAG-------TAACGCCAT---------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T..............................................................................................................................................................................................................................................................2580.252000000000000000000000000020000000000000000000000000000000000000
........................................TCAAGAATATATATACTTTAAGGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.252000000000000000000000000001100000000000000000000000000000000000
.........................................CAAGAATATATATACTTTAAGGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.202000000000000000000000000000001100000000000000000000000000000000
.........................................................................................................................................................................................................................AACACTAAGATGAG-------TAACGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.153000000000000000000000000030000000000000000000000000000000000000
.......................................................................................................................................................................................................................TAAACACTAAGATGAG-------TAACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000000000000000000000000000000000000003000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTATGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAA...........27200.153000000000000000000000000020000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAAT..........22200.153000000000000000000000000000000000000003000000000000000000000000
...................................................TATACTTTAAGGGGTCGGAGATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141000000000000000000000000000000100000000000000000000000000000000
..................................TGCTGATCAAGAATATATATACTTTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27150.132000000000000000000000000000010000010000000000000000000000000000
...........................................................................................................................................................................AATACCA----------------------------AAGACAATATAAACACTAAGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2990.111001000000000000000000000000000000000000000000000000000000000000
.........................................CAAGAATATATATACTTTAAGGGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26100.101000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................TAAACACTAAGATGAG-------TAACGCCAT---------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000020000000000000000000000000000000000000000000000000
........................................TCAAGAATATATATACTTTAAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.101000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTATGCAGCTTGAT-------------------T-----------TTT-----T--------GAAA............25200.102000000000000000000000000002000000000000000000000000000000000000
.........................................CAAGAATATATATACTTTAAGGGGTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.101000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTATGCAGCTTGAT-------------------T-----------TTT-----T--------GAA.............24200.102000000000000000000000000000200000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTATGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAAT..........28200.102000000000000000000000000000200000000000000000000000000000000000
...........................................AGAATATATATACTTTAAGGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.091000000000000000000000000000000010000000000000000000000000000000
............................................................AGGGGTCGGAGATGCTTCCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.081000000000000000000000000000000010000000000000000000000000000000
............GCTAGATCGACTTGGCTATTGGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.081000001000000000000000000000000000000000000000000000000000000000
....................................CTGATCAAGAATATATATACTTTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25170.061000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAAT..........24200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTGAT-------------------T-----------TTT-----T--------GAAAAT..........20200.051000000000000000000000000010000000000000000000000000000000000000
......................................................................................TGTTACATACATTTGG----AT--TTTGTA-CA---------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000010000000000000000000000000000000
..................................................................CGGAGATGCTTCCTTCTGCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................AACACTAAGATGAG-------TAACGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TATAAACACTAAGATGAG-------TAACGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000010000000000000000000000000000000
.....................................................................................CTGTTACATACATTTGG----AT--TTTGTA-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................AAACACTAAGATGAG-------TAACGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AATATAAACACTAAGATGAG-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTATGCAGCTTGAT-------------------T-----------TTT-----T--------GA..............24200.051000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAATTG--------24200.051000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................AAGACAATATAAACACTAAGATGAG-------TA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAAT..........26200.051000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATGCAGCTTGAT-------------------T-----------TTT-----T--------GAAAATTG--------28200.051000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTTGAT-------------------T-----------TTT-----T--------GAAA............20200.051000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................AAGACAATATAAACACTAAGATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................CAATATAAACACTAAGATGAG-------TAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000100000000000000000000000000000000000000000000000000000000000
.............................................................................................TACATTTGG----AT--TTTGTA-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
GACGGACA--GGGCCAAATCAACTCAGCTCGTCACCCTGATCAAGAATATATATACTTTGTGGGGTCTGCCACGCCTCCTTCTGCCTGTTACATACATTT-------------CAA-CA---------AAACCATTATACCCT----------------------------GATTTCC---------------------------------------------------CA----------------------------------TTGAAAATGGGTTCAGGGTATAAAAATTAA--------------------------------------------------------------------------AAAAAAACTTAAG----AAAT--------------------AAAATATTT------------------------------------TAAAATGAAATATCTTGTATATAAATATAAAATATTTTTG-----------------------------------------TGAATTTTTTAAATTTTTCGT--------------------TGC-----TTTAATGTTTTTATACA---TT---TATTAGA--------------------------------------------------------CA-----CT-CTTTCTC--------ACCCT--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................T----------------------------GATTTCC---------------------------------------------------CA----------------------------------TTGAAAATGGGTTCAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................28204.10828200000
........................................................................................TTACATACATTT-------------CAA-CA---------AAACCATTATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.255500000
........................................................TTTGTGGGGTCTGCCACGCCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.204040000
............GCCAAATCAACTCAGCTCGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153300000
...................CAACTCAGCTCGTCACCCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153300000
..........GGGCCAAATCAACTCAGCTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153300000
......................CTCAGCTCGTCACCCTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102200000
......................................................................................TGTTACATACATTT-------------CAA-CA---------AAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
...GGACA--GGGCCAAATCAACTCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
....................................................................................................................................CATTATACCCT----------------------------GATTTCC---------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
.......................TCAGCTCGTCACCCTGATCAAGAATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
..............................................................................................................................................................................TTCC---------------------------------------------------CA----------------------------------TTGAAAATGGGTTCAGGGTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
...........GGCCAAATCAACTCAGCTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
..........................................................................CCTCCTTCTGCCTGTTACATACATTT-------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
droGri2
AATAAACT--TGATTAGATCGACTCTATTATTGATGCTGATCAAGAATATATATTCATTATGGTTTCGCACTTGCTTCCTTCTTCATGCTATAGTCCACT-------------CAG-ATATTCTCACATATTCAGAAAACCTA----------------------------AATA------------------------------------------------------------------AAATAAAAAAA-----TAAAAAATTGCTTAATT------------------------------------TGTAGCACCTG------T------------------------------------------A--TTATTGCA---------------------------------------------------------TATGGCAGCACTTTA-C------------------------------------------------------TTA--------------------------------------------------------------------CCCACTTTTCCAG----------------------------T----------------------GCTTACCTAAGTGTTGCTGCACTGAGGCATG-----CC------------------CTAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
GACAGACA--TGGCCTAATCGACTCCGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAAAGATTCCTTCTGGACGTTACACACATAGAC----TT--TTAGCA-CA---------AATCTAACATCCCAC----------------------------A------GCTTAAAAGCTTAGCTTATTAACAACTAA---AGAACCGATTTTCAATC--CTCCCAC--CATAAGTA---------------------------------------AAGAAAAT-----------------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTT--TCCTAACTTTCCAC-----------------T--------------------TGC----------------------------------------------------------------------ATT-------------------------------------AAAGCTG--------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................GCTGATCAAGAATATATATACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22201.452902900000000
............................................................TGGGGTCGGAAAAGATTCCTTCTGGACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2861.1770700000000
..................................................................................TGGACGTTACACACATAGAC----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................TGGGGTCGGAAAAGATTCCTTCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2571.0070610000000
.................................................................TCGGAAAAGATTCCTTCTGGACGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.8350400000100
........................................................................AGATTCCTTCTGGACGTTACACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.5040400000000
.................................ATGCTGATCAAGAATATATATACTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.4080000000800
..................................TGCTGATCAAGAATATATATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3060600000000
..........................................................TATGGGGTCGGAAAAGATTCCTTCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.2920200000000
........................................................................AGATTCCTTCTGGACGTTACACACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.2520200000000
.................................................TATATACTTTATGGGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000500
..........................................................................ATTCCTTCTGGACGTTACACACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2550500000000
.................................................................TCGGAAAAGATTCCTTCTGGACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.1710100000000
.................................................................TCGGAAAAGATTCCTTCTGGACGTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.1710100000000
.................................................................TCGGAAAAGATTCCTTCTGGACGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1710100000000
..................................TGCTGATCAAGAATATATATACTTTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1530000003000
.............................................................GGGGTCGGAAAAGATTCCTTCTGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410100000000
.................................................................TCGGAAAAGATTCCTTCTGGACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.1410100000000
................................................ATATATACTTTATGGGGTCGGAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25140.1420200000000
............................................................TGGGGTCGGAAAAGATTCCTTCTGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.1410100000000
........................................................................AGATTCCTTCTGGACGTTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310100000000
.......................................................................AAGATTCCTTCTGGACGTTACAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.1310100000000
.................................................................TCGGAAAAGATTCCTTCTGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.1310100000000
.................................................................TCGGAAAAGATTCCTTCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310100000000
.......................................................................AAGATTCCTTCTGGACGTTACACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310100000000
.....................................................................AAAAGATTCCTTCTGGACGTTACACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.1310100000000
................................................................GTCGGAAAAGATTCCTTCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310100000000
..........................................................TATGGGGTCGGAAAAGATTCCTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.1310100000000
.......................................................................AAGATTCCTTCTGGACGTTACACACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.1310100000000
........................................................................AGATTCCTTCTGGACGTTACACAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310100000000
...................................................TATACTTTATGGGGTCGGAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22170.1220200000000
.....................................................TACTTTATGGGGTCGGAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.1120000010010
................................................ATATATACTTTATGGGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020200000000
...........................CTATTGATGCTGATCAAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
..........................................................................ATTCCTTCTGGACGTTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020200000000
........................................................................AGATTCCTTCTGGACGTTACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.0910100000000
........................................................................AGATTCCTTCTGGACGTTACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710100000000
...................................................TATACTTTATGGGGTCGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000010
............................................................TGGGGTCGGAAAAGATTCCTTCTGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010000000
................................................................................TCTGGACGTTACACACATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
......................................GATCAAGAATATATATACTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
..............................................ATATATATACTTTATGGGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001000000
...................................................TATACTTTATGGGGTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
.........................................................................GATTCCTTCTGGACGTTACACACATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510010000000
..................................................ATATACTTTATGGGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000010
.....................................TGATCAAGAATATATATACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000100
............................TATTGATGCTGATCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000010
.........................................................................GATTCCTTCTGGACGTTACACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000010
droPer2
GACAGACA--TGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTTTGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCAC----TT--TTACCA-CA---------AATCTAATATACCCC----------------------------AATACTC----------------------------A-------------T--------TT----------------------------------TGAGTATCGGG-------TATAAAAATTGC--------------------------------------------------------------------------AG--TCACCCAAG----AAATTTCGGTATTGTTATTTAGAAAAACTATTC------------------------------------TAAAATTTCAT----------------------------------------------------------------------------------------------------GGC-----------------------------------------------GC------------------CCCCGGGTGG----ACT--------TG----------------------------------CAATTTAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................GTCGGAAACGATTCCTTCTGGACGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.408080000
..................................TGCTGATCAAGAATATATATACTTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.357160000
..........................................................................ATTCCTTCTGGACGTTACAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.153000030
GACAGACA--TGGCTCAATCGACTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102020000
..................................TGCTGATCAAGAATATATATACTTTTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28150.071010000
..........................................AAGAATATATATACTTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
.................ATCGACTCGGCTATTGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
....................................CTGATCAAGAATATATATACTTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
droAna3
GACGGACA--TGCTTATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTACAGGGTCGGAGATGTATCCTTCACTGCGTTGCCCACTTTT-------------TTA-------------AATTATAT----------------------------------A------GGGTATA------------------TAAAA-T-------------------TA-------TAAGGGTAT---------------------------------------AAAAATGTATATTTCTGATCTGTGT---TT------G-----------AAAA-------CCT-----------------------------TTCT----------------------------------------------------------------------------------TAT----------------------------------------------------------------------------------------------------GGG----------------------GCCTTAATTGTC---CT----------TCTTGGGT------------------GATTGTTTAAACGCTAA-----------AAATTTAATT------------------CTTAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....GACA--TGCTTATATCGACTCAGGAGGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.153030000
..................................................................CGGAGATGTATCCTTCACTGCGTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26150.132200000
.................................................................TCGGAGATGTATCCTTCACTGCGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26150.132200000
...........GCTTATATCGACTCAGGAGGTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
................TATCGACTCAGGAGGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102002000
..................................................................CGGAGATGTATCCTTCACTGCGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.071100000
...................................................................GGAGATGTATCCTTCACTGCGTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25160.061000001
......................................................................GATGTATCCTTCACTGCGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.061100000
......................................................................GATGTATCCTTCACTGCGTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22170.061000001
.......................................................................ATGTATCCTTCACTGCGTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061000001
.................................................TATATACTTTACAGGGTCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.051100000
........................................................................TGTATCCTTCACTGCGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18190.051010000
..CGGACA--TGCTTATATCGACTCAGGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
.........................................................................GTATCCTTCACTGCGTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
droBip1
GACGGACA--TGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACCGCGTTGCACACTTTT-------------GGAAAA---------AAAGTATAATACCCT----------------------------C---------------------------------------------------------TG-------CAAGGGTAT---------------------------------------AATAAAT-----------------TTTGGTGGTTA------TAATTAT--------------------------------------------ATA---------------------------------------------------------TATATAAATTTATAA-T------------------------------------------------------AAA--------------------------------------------------------------------TTTATTTTTTTGGTTGAAGTTA---GT---TGTTACGC------------------AGCCG-------------------G-----------TTAT--G-CC--GTCGGC--------ACCCTGTSizeHit CountTotal NormTotal
No Reads
droKik1
GACGGACA--TGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTCT-------------GAC-TG---------AAATTATAATACCCT---------------------------------------------------------------------------------------G-------CAAGGGTATAAAAA-----TATTAAATCATCTATTC-----------------------------------------------------------------------------------------------AA--TAGCCCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------TGA-----------------CTTTTTTTTTTGTTAGGCTCTTGA----------------------------------------------------------------------CTTAATGCCGCAATACCGCAACTCA-----TT-CTTGGCC--------ACATTACSizeHit CountTotal NormTotal
No Reads
droFic1
GACGTACA--GACGGATTTCGATTCTGCTCGTGATGCTGATCAAGAATATATATACTATATGGGGTCTGAGGTGTCTCCTTCACTGCGTTGCAAACTTCT-------------GAC-TG---------AAATTATAATACCCT----------------------------TTTGCTC---------------------------------------------------TG-------CAAGGGTAT---------------------------------------AAAAATCGTTGTT----------------------------------------------------------------------------ATTCAGTAGAC--------------------------------------------------------------------------------------------------------------------------AAGCAAAGTTTTATG--A------------------------------------------------------------------ATATAGAATCCTAACA----------TCTTCGATGTTGTT-------------------TAGCCTTTAA-----------GTAT-----T-------------TT--------SizeHit CountTotal NormTotal
No Reads
droEle1
------CA--TGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATATACTTTATACGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTCT-------------GAC-TG---------AAATTATAATAACCT----------------------------C---------------------------------------------------------TG-------CAAGGGTATAAAAAGAAATTGTTAAATTGAGTAATGGG-------TATCA-------------------CTTG---GC------ACTTT------TACAATTCAAAAGGT-----------------------------TTCCTGTTT--------------------------------------------------T-----------------A------------------------------------------------------AAC-AAGTTA--------------------------------------------------------------------------------------TTT------ACAT----AGTCATTTTTCCA-----------------T--------TG------------A--A-ATCGGTAATC--------ACAGTGASizeHit CountTotal NormTotal
No Reads
droRho1
GACGGACA--TGGCTATATCGACTCCCCTATTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTACAAACTTCT-------------GAC-CA---------AAATTATAATACAAT----------------------------C---------------------------------------------------------TG-------CAAGGGTAT---------------------------------------AAAAATTAAT--------------TTTGGAAATCGTA-----------AAAA-------TCT----------------------T--CAATTATC--------------------------------------TACAGATTTTCC----------------------------------------------------------------------------------------------TATTAATTTTCGGA-----------------TTTTTTATG-----------------------T-------------------------------------------------------CGGTATGTAAACATTGA-----------ATAT-----C------------------TTTGASizeHit CountTotal NormTotal
No Reads
droBia1
GACGGACA--TGGCTAGATCGACTCGTCTAGTGATGCTTATCAAGAATATATATA-TTAATGGGGTCGGAAACGTCCCCTTCACTGCGTTGCAAACTTCT-------------GAC-TG---------AAATCAATATAACCT----------------------------T---------------------------------------------------------TG-------CAAGGGTAT---------------------------------------AAAAATGAACGTG-------ACTTT---GT------GCTTTTATTTGTACAAA-------TA-----------------------------------TAA------------------------------------------------------------------A-A------------------------------------------------------AAA-AAGTTATTTTATTAATAATTTTGCGA-----------------TATATTTTG-------------------------------------------------------------------------------------------------------------------------------TTGTG--------SizeHit CountTotal NormTotal
No Reads
droTak1
GACGGACA--TGGCTAGATCGACTCGTCTAGTGATGCTGATCAAGAATATATATACTTTATGTGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACATCTGAATTAT-AATTTAT---G---------AATTATGAATAAAATATTTAAAAAATCGGGACACTATATCATATAGCTGC---------------------------------------------------CA----TTGGAACG--A---------------------------------------TCGAAAAT-----------------TA-------------AA------TGCAAATTAATAGG---A-------------------------------------------------------------------------------------------------------AAAAA-----------------------------ATG------------------------------------------------------------------------------------------------------------------ATTGC------TT----CGTTGTTTTTTTA-----------------T--------TG------------T--A-TTC-TCGTTA-ACTCTG--------SizeHit CountTotal NormTotal
No Reads
droEug1
TACGGACA--TGGCTCAATCGTCTTCGCTATTCATCCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTTTCCTTCTACCTGTTACATAATTTT-------------CAA-CG---------AATCTAATGTACCCT----------------------------TTTACTC---------------------------------------------------TA----------------------------------CGAGTAACGGG-------AATAAAAAGT-----------------TCTCGATATATA------------ACATATTAT---------------------------A--TAACAATC--------------------------------------AATGGTTTTTATTATTACACCCGA-------TTA-------------------------------------------------------CCAT-------------------------------------------------------------------------------------------------------------TTGGTTTTATCGAATTTCAG-------------------G-----------TTT-----T--------TATTAATC--------SizeHit CountTotal NormTotal
No Reads
dm3
GACGGACG--TGGCTAGATCGACTCGGCTATTGATCCTGATGAAGAATATATATACTTTATATGGTCGGAAACGCTTCCTTTTGACTGTTAAAAACTTTT-------------CAA-CG---------T-----------TTT----------------------------C---------------------------------------------------------TG-------GCAGTGTAT--------------------------------------------------------------------------G------------CCAGATTAA---------------------------A--TTAA-----------------------------------------------------------------------------ATTAA-----------------------------ATGTTTGTTCCTTTGTTAAATTAATAATTCCTTTT--T------------------------------------------------------------------------------------------------------------C-----------------T--------TA------------T--A-TTT-T----GATCATTT--------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.............CTAGATCGACTCGGCTATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droSim2
-ACGGACA--TGACTAGATGGACTCGGCTATTGATCATCATCAATAATATATATACTTCATATGGTCGGAAACGTTTCCTTCTGCCTGTTACATACTTTT-------------TCA-CA---------AATCTAGTATACTCT----------------------------AAAA------------------------------AAT-CTGAGTTGCCTC--------TT-------TAAGTAT-------------------------------------------------T--------------------------------------------------------------------------TA--CTACTATTTAGAA--------------------------------------------------------------------------------------------------------------------------ATATAAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................ATATATATACTTCATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2453.601800000045111051000
............................................................................TCCTTCTGCCTGTTACATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21202.0541000000410000000000
..............................................ATATATATACTTCATATGGTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2651.80900000006000030000
..............................................ATATATATACTTCATATGGTCGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2551.80900000002010042000
...........................................................................TTCCTTCTGCCTGTTACATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22201.70340000001202200000000
.................................................TATATACTTCATATGGTCGGAAACGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
.....................................................TACTTCATATGGTCGGAAACGTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.67200000000002000000
......CA--TGACTAGATGGACTCGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000001000000000
..........TGACTAGATGGACTCGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100000000001000000
................................................ATATATACTTCATATGGTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.40200010000010000000
..............................................ATATATATACTTCATATGGTCGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.29200000001001000000
.............CTAGATGGACTCGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1640.25100000010000000000
..........................................................................TTTCCTTCTGCCTGTTACATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25100000000010000000
...........................................................................TTCCTTCTGCCTGTTACATACTTTT-------------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26100.20200000000000011000
...............................................TATATATACTTCATATGGTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.20100000001000000000
..............................................ATATATATACTTCATATGGTCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.17100000010000000000
................................................................................TCTGCCTGTTACATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.10200000002000000000
................................................ATATATACTTCATATGGTCGGAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25130.08100000001000000000
..............................................ATATATATACTTCATATGGTCGGAAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28130.08100000000000010000
..............................................ATATATATACTTCATATGGTCGGAAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28170.06100000000000010000
.............................................................................CCTTCTGCCTGTTACATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000000000
...........................................................................TTCCTTCTGCCTGTTACATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000010000000000
..............................................ATATATATACTTCATATGGTCGGAAAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100000000000001000
...........................................................................TTCCTTCTGCCTGTTACATACTTTT-------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000000001000
droSec2
GCCGGACATATGGCCAGATCGACTCGACTAGCGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACGATTGCTTCTGCCTGTTACATACGTAT-------------CAA-CA---------AATCTAGTATAACCT----------------------------TTCACTC---------------------------------------------------TT----------------------------------CGAGTAACGGG-------TATAGATATGTTTG------------------------------------TATAATTTAT---------------------------A--TAACAATGTATTA--------------------------------------------------CAACAAA-------TTAACTTAA-----------------------------ATG--------------------------------------------------------------------------------------------------------------A----TCGC------TTCTGTGAGT------------------AA----TAT--------TG----------------------------------TGTTGTTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................ATATATATACTTTATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1533000
...................................................TATACTTTATATGGTCGGAAACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.1410010
..............................................ATATATATACTTTATATGGTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020020
..............................................ATATATATACTTTATATGGTCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
...............................................TATATATACTTTATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000
droYak3
GACGGACA--TGGCCAGATCGACTCGGCTATTGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTACATACTTTT-------------CAA-CG---------AATCTAGTATACCCT----------------------------TTTACTC---------------------------------------------------TA----------------------------------CGAGTAACGGG-------TAAAAAAACCTATGCT-------AGTTT---GT------G-----------ACAA-------CCT-----------------------------------------------------------------------------------------------------TTAA-C------------------------------------------------------AAA--------------------------------------------------------------------CACTTCTTTCGGCCTGAAGGGGC-------------------------------------------------------TGA-----------ATAT--A-TTT-T----GTACTTT----TTTGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................CTTCTGCCTGTTACATACTTTT-------------CAA-CG---------AA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.6513013000000000
..................................TCCTGATCAAGAATATATATACTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.25505000000000
.......................TCGGCTATTGATCCTGATCAAGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000000002
..............................................................................................................................................................................ACTC---------------------------------------------------TA----------------------------------CGAGTAACGGG-------T.....................................................................................................................................................................................................................................................................................................................................................................................................................................18200.10200200000000
.................ATCGACTCGGCTATTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100100000000
...........................................................................................................................................................................TTTACTC---------------------------------------------------TA----------------------------------CGAGTAACGGG-------T.....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
....................................................................GAAACGCTTCCTTCTGCCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
.............................................................................CCTTCTGCCTGTTACATACTTTT-------------CAA-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
..................................................................CGGAAACGCTTCCTTCTGCCTGTTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
droEre2
GACGGACA--TGACCAGATCGACTCGGCTATTGATCCTGATCAAGAATATATATTATTTATATGGTCGGGAACGCTTTCTTCTGACTGTTACATACTTTT-------------CAAGAA---------AATCTAAGATTTCGT----------------------------TG------------------------------------------------------------------AACAGTAT---------------------GTAACAGG-------A----GGAT-----------------------------G------------CCAAA-------TAGCAAATAAATTGTTTATTTTTTG--TAGTCGTTTTTAA----------------------TAACAAGATTC------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------T--------C----------------------------AAAGTTGCCTTAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................ATTGATCCTGATCAAGAATATATATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000000

Generated: 05/19/2015 at 10:31 AM