ID:

dwi_3838

 Coordinate:

scf2_1100000004958:2475587-2475737 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

0.1 0.2 0.3

Flybase annnotation

exon [dwil_GLEANR_10566:5]; CDS [Dwil\GK10468-cds]; intron [Dwil\GK10468-in]

Repeatable elements

NameClassFamilyStrand
Gypsy-1_DWil-LTRLTRGypsy-
mature
  1. scf2_1100000003226:1294-1320 +
  2. scf2_1100000001724:2737-2763 +
  3. scf2_1100000009055:994-1020 +
  4. scf2_1100000004515:4119478-4119504 +
  5. scf2_1100000004873:27543-27569 -
  6. scf2_1100000004887:607533-607559 +
  7. scf2_1100000004943:1292696-1292722 +
  8. scf2_1100000004918:26790-26816 +
  9. scf2_1100000004936:331742-331768 -
  10. scf2_1100000004954:1502000-1502026 +
  11. scf2_1100000004956:173797-173823 +
  12. scf2_1100000004958:2101730-2101756 -
  13. dwi_3838  scf2_1100000004958:2475611-2475637 +
  14. scf2_1100000004961:4334392-4334418 +
  15. scf2_1100000004962:104277-104303 +
  16. scf2_1100000004967:504377-504403 -
  17. scf2_1100000004967:4145110-4145136 +
  18. scf2_1100000004968:1223867-1223893 +
  19. scf2_1100000007584:1005-1031 +
  20. scf2_1100000000330:3325-3351 +
  21. scf2_1100000004190:1515-1541 -
  22. scf2_1100000004575:9489-9515 -
  23. scf2_1100000004958:2082510-2082536 -
  24. scf2_1100000004968:1021837-1021863 -
star
  1. scf2_1100000004568:17405-17433 +
  2. dwi_3838  scf2_1100000004958:2475660-2475688 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------###############################-------------------
CATTGGCGTCGCCTTTCTATTGGCCGCCCATCGTGTCCCGTTGACTTTTGCTGCTTTCCTTTCTCTGGCGGCGCTGCCGTCGCCCGTCGCTCCCCTCAATCCACTTGTCATACCCAACTTTGCTCAAATTCTTCCCACATTACAACTATGCATACATATATTTGTTGTATTTAACTTAATCTATTATTTAATAATAATTAGCCTTATTAATTCAATGTATAATGTTGATTAATTTCATTTATACCGCAATC
**************************************************************************..............................................................................*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body		 V119
head
..............................................TTTGCTGCTTTCCTTTCTCTGGCGG.................................................................................................................................................................................... 25 0 1 10.00 10 6 4 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAATC...................................................................................................................................................... 27 0 20 4.90 98 71 27 0 0 0
...................................TCCCGTTGACTTTTGCTGCTTTCCTT.............................................................................................................................................................................................. 26 0 3 4.67 14 13 1 0 0 0
.........................................TGACTTTTGCTGCTTTCCTTTCTCT......................................................................................................................................................................................... 25 0 1 4.00 4 1 3 0 0 0
.........................................TGACTTTTGCTGCTTTCCTTTCTC.......................................................................................................................................................................................... 24 0 1 4.00 4 3 1 0 0 0
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATTTA.......... 26 0 12 3.33 40 31 9 0 0 0
...........................................................................................................................TCAAATTCTTCCCACATTACAACTATGCA................................................................................................... 29 0 2 3.00 6 5 1 0 0 0
.................................TGTCCCGTTGACTTTTGCTGCTTTCCT............................................................................................................................................................................................... 27 0 1 3.00 3 3 0 0 0 0
.........................................TGACTTTTGCTGCTTTCCTTTCTCTG........................................................................................................................................................................................ 26 0 1 3.00 3 3 0 0 0 0
..............................TCGTGTCCCGTTGACTTTTGCTGCTT................................................................................................................................................................................................... 26 0 1 3.00 3 2 1 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAAT....................................................................................................................................................... 26 0 20 2.15 43 28 15 0 0 0
.............................................................................CGTCGCCCGTCGCTCCCCTCAATCCA.................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
.................TATTGGCCGCCCATCGTGTCCCGTTGACT............................................................................................................................................................................................................. 29 0 1 2.00 2 2 0 0 0 0
..................................................................................................................................................................................................TAATTAGCCTTATTAATTCAATGTATAA............................. 28 0 1 2.00 2 2 0 0 0 0
.............TTTCTATTGGCCGCCCATCGTGTCCCG................................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
.............................................TTTTGCTGCTTTCCTTTCTCTGGCGG.................................................................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAATCAA.................................................................................................................................................... 29 1 1 2.00 2 2 0 0 0 0
.............TTTCTATTGGCCGCCCATCGTGTCC..................................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
............................CATCGTGTCCCGTTGACTTTTGC........................................................................................................................................................................................................ 23 0 1 2.00 2 0 2 0 0 0
...............................CGTGTCCCGTTGACTTTTGCTGCTT................................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0
..............TTCTATTGGCCGCCCATCGTGTCCCG................................................................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAA........................................................................................................................................................ 25 0 20 1.85 37 25 12 0 0 0
...................................TCCCGTTGACTTTTGCTGCTTTCCT............................................................................................................................................................................................... 25 0 3 1.67 5 3 1 1 0 0
................................................TGCTGCTTTCCTTTCTCTGGCGGCGC................................................................................................................................................................................. 26 0 2 1.50 3 3 0 0 0 0
...................................................TGCTTTCCTTTCTCTGGCGGCGCTG............................................................................................................................................................................... 25 0 3 1.33 4 4 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCC............................................................................................................................................................. 20 0 20 1.20 24 24 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCC............................................................................................................................................................ 21 0 20 1.15 23 23 0 0 0 0
.........................................................................................................TGTCATACCCAACTTTGCTCAAATTCT....................................................................................................................... 27 0 9 1.11 10 10 0 0 0 0
..........................................GACTTTTGCTGCTTTCCTTTCTC.......................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..............................TCGTGTCCCGTTGACTTTTGCTGCTTT.................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
.................TATTGGCCGCCCATCGTGTCCCGTTG................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
..............TTCTATTGGCCGCCAATCGTGTCCCGT.................................................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0
........................................................................................................................TGCTCAAATTCTTCCCACATTACAACT........................................................................................................ 27 0 2 1.00 2 2 0 0 0 0
.........................................TGACTTTTGCTGCTTTCCTTTCTCTT........................................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................TGATTAATTTCATTTATACCGCAATC 26 0 1 1.00 1 1 0 0 0 0
..............................................TTTGCTGCTTTCCTTTCTCTGTCGG.................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
....................................................................................................................................TCCCACATTACAACTATGCATACATA............................................................................................. 26 0 2 1.00 2 2 0 0 0 0
.................TATTGGCCGCCCATCGTGTCCCGTA................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
...........................CCATCGTGTCCCGTTGACTTTTGC........................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0
.............................ATCGTGTCCCGTTGACTTTTGCTGCTT................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.............................ATCGTGTCCCGTTGACTTTTGCTG...................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.....................................................................................................CACTTGTCATACCCAACTTTGCTCAAAT.......................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0
..............................TCGTGTCCAGTTGACTTTTGCTCCTT................................................................................................................................................................................................... 26 2 1 1.00 1 0 1 0 0 0
.................................TGTCCCGTTGACTTTTGCTGCTTTCC................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................TACAACTATGCATACATATATTTGTTG.................................................................................... 27 0 2 1.00 2 2 0 0 0 0
............................CATCGTGTCCCGTTGACTTTTGCTG...................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..............TTCTATTGGCCGTCCATCGTGTCCCG................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.............TTTCTATTGGCCGCCCATCGTGTCCC.................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..............TTCTATTGGCCGCCCATCGTGTCCCGTTA................................................................................................................................................................................................................ 29 1 1 1.00 1 1 0 0 0 0
..............................TCGTGTCCCGTTGACTTTTGCTGCTTA.................................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0
....................TGGCCGCCCATCGTGTCCCGTTGACTT............................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
............................CATCGTGTCCCGTTGACTTTTG......................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..........................................GACTTTTGCTGCTTTCCTTTCTCTGG....................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................TGGCCGCCCATCGTGTCCCGTTGACTTT........................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
..........................................................................................TCCCCTCAATCCACTTGTCATACCCAAC..................................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................TAGCCTTATTAATTCAATTTATAATGT.......................... 27 1 1 1.00 1 0 1 0 0 0
..................................GTCCCGTTGACTTTTGCTGCTTTCCTT.............................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
....................................................................................CGTCGCTCCCCTCAATCCACTTGTCA............................................................................................................................................. 26 0 2 1.00 2 1 1 0 0 0
..........................................GACTTTTGCTGCTTTCCTTTCTCTT........................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0
...............TCTATTGGCCGCCCATCGTGTCCCGTTAT............................................................................................................................................................................................................... 29 2 1 1.00 1 1 0 0 0 0
..............TTCTATTGGCCGCCCATCGTGTCCCGT.................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCA......................................................................................................................................................... 24 0 20 0.95 19 19 0 0 0 0
.........................................................................................................TGTCATACCCAACTTTGCTCAAATTC........................................................................................................................ 26 0 9 0.67 6 6 0 0 0 0
...................................TCCCGTTGACTTTTGCTGCTTTCCTTT............................................................................................................................................................................................. 27 0 3 0.67 2 2 0 0 0 0
..............................................................................................................TACCCAACTTTGCTCAAATTCTTCCCA.................................................................................................................. 27 0 8 0.63 5 5 0 0 0 0
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATT............ 24 0 13 0.62 8 7 1 0 0 0
........TCGCCTTTCTATTGGCCGCCCATCG.......................................................................................................................................................................................................................... 25 0 20 0.60 12 8 4 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCT........................................................................................................................................................... 22 0 20 0.55 11 11 0 0 0 0
.............................................................TCTCTGGCGGCGCTGCCGTCGCCCG..................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
........................CGCCCATCGTGTCTTGTGGA............................................................................................................................................................................................................... 20 3 2 0.50 1 1 0 0 0 0
..................................................................................CCCGTCGCTCCCCTCAATCCACTTG................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0
...............................................................................TCGCCCGTCGCTCCCCTCAATCCACT.................................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0
...........................................................................................................................TCAAATTCTTCCCACATTACAACTATG..................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
................................................TGCTGCTTTCCTTTCTCTGGCGGCG.................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
............................................................................................................................CAAATTCTTCCCACATTACAACTATGCA................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................CTTCCCACATTACAACTATGCA................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................TTCCCACATTACAACTATGCATACATA............................................................................................. 27 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................TAATAATTAGCCTTATTAATTCAATGTA................................ 28 0 2 0.50 1 1 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTC.......................................................................................................................................................... 23 0 20 0.50 10 10 0 0 0 0
...................................................................................................TCCACTTGTCATACCCAACTTTGC................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAAAAAA.................................................................................................................................................... 29 3 2 0.50 1 1 0 0 0 0
...............................................................................TCGCCCGTCGCTCCCCTCAATCCACTTG................................................................................................................................................ 28 0 2 0.50 1 0 1 0 0 0
................................................................................CGCCCGTCGCTCCCCTCAATCCACT.................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
...........................................................................................CCCCTCAATCCACTTGTCATACCCAACTT................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
................................................................................CGCCCGTCGCTCCCCTCAATCCACTTGT............................................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0
........................................................................................................................TGCTCAAATTCTTCCCACATTACAAC......................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.........................................TGACTTTTGCTGCTTTCCTTTCTCTA........................................................................................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0
...................................................................................................TCCACTTGTCATACCCAACTTTGCT............................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.....................................................................................................CACTTGTCATACCCAACTTTGCTCAAA........................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
............................................................TTCTCTGGCGGCGCTGCCGTCGCCC...................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
..TTGGCGTCGCCTTTCTATTGGCCGC................................................................................................................................................................................................................................ 25 0 20 0.50 10 0 10 0 0 0
............................................................................................................................CAAATTCTTCCCACATTACAACTA....................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
................................................................................CGCCCGTCGCTCCCCTCAATCCA.................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................ATTCTTCCCACATTACAACTATGCA................................................................................................... 25 0 2 0.50 1 0 1 0 0 0
..........................................................................................TCCCCTCAATCCACTTGTCATACCCAACT.................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................TTACAACTATGCATACATATATTTGTTG.................................................................................... 28 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................CAACTATGCATACATATATTTGTTG.................................................................................... 25 0 2 0.50 1 1 0 0 0 0
................................................................................CGCCCGTCGCTCCCCTCAATCCACTTG................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0
..................................................................................................ATCCACTTGTCATACCCAACTTTGCTCA............................................................................................................................. 28 0 2 0.50 1 0 1 0 0 0
...............................................................................................TCAATCCACTTGTCATACCCAACTTTG................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
..............................................................................................................TACCCAACTTTGCTCAAATTCTTCCC................................................................................................................... 26 0 8 0.50 4 4 0 0 0 0
........................................................................................................................TGCTCAAATTCTTCCCACATTACAACTA....................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
.................................................................TGGCGGCGCTGCCGTCGCCCGTCGCTC............................................................................................................................................................... 27 0 20 0.45 9 9 0 0 0 0
.........................................................................................................TGTCATACCCAACTTTGCTCAAATTCTT...................................................................................................................... 28 0 9 0.44 4 4 0 0 0 0
..TTGGCGTCGCCTTTCTATTGGCCG................................................................................................................................................................................................................................. 24 0 20 0.40 8 0 8 0 0 0
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATTT........... 25 0 13 0.38 5 4 1 0 0 0
..............................................................................................................TACCCAACTTTGCTCAAATTCTTCC.................................................................................................................... 25 0 8 0.38 3 3 0 0 0 0
..............................................................................................................TACCCAACTTTGCTCAAATTCTTCCCAC................................................................................................................. 28 0 8 0.38 3 2 1 0 0 0
..............................................................................................................TACCCAACTTTGCTCAAATTCTTCCCACA................................................................................................................ 29 0 8 0.38 3 3 0 0 0 0
.............................................................................CGTCGCCCGTCGCTCCCCTCAATC...................................................................................................................................................... 24 0 20 0.35 7 0 7 0 0 0
...................................TCCCGTTGACTTTTGCTGCTTT.................................................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0
...................................TCCCGTTGACTTTTGCTGCTTTCC................................................................................................................................................................................................ 24 0 3 0.33 1 1 0 0 0 0
...................................................TGCTTTCCTTTCTCTGGCGGCGCTGC.............................................................................................................................................................................. 26 0 3 0.33 1 0 1 0 0 0
...................................TCCCGTTGACTTTTGCTGCTTTCCTTA............................................................................................................................................................................................. 27 1 3 0.33 1 1 0 0 0 0
....................................................GCTTTCCTTGATCTGGCGGC................................................................................................................................................................................... 20 2 3 0.33 1 0 0 0 1 0
.......................................................................CGCTGCCGTCGCCCGTCGCTC............................................................................................................................................................... 21 0 20 0.30 6 6 0 0 0 0
...........................................................................GCCGTCGCCCGTCGCTCCCCTCAATC...................................................................................................................................................... 26 0 20 0.30 6 5 1 0 0 0
.................................................................TGGCGGCGCTGCCGTCGCCCGTCG.................................................................................................................................................................. 24 0 20 0.25 5 5 0 0 0 0
........................................................................................................................................................TACATATATTTGTTGTATTTAACTTAATC...................................................................... 29 0 4 0.25 1 1 0 0 0 0
..................................................................................................................CAACTTTGCTCAAATTCTTCCCACAT............................................................................................................... 26 0 8 0.25 2 1 1 0 0 0
...................................................................................................................................................................................................................TCAATGTATAATGTTGATTAATTTCATT............ 28 0 13 0.23 3 3 0 0 0 0
...........................................................................................................TCATACCCAACTTTGCTCAAATTCT....................................................................................................................... 25 0 9 0.22 2 2 0 0 0 0
........................................................................................................TTGTCATACCCAACTTTGCTCAAATTC........................................................................................................................ 27 0 9 0.22 2 2 0 0 0 0
...................................................................................................................AACTTTGCTCAAATTCTTCCCACATTA............................................................................................................. 27 0 10 0.20 2 2 0 0 0 0
...........................................................................GCCGTCGCCCGTCGCTCCCCTCAA........................................................................................................................................................ 24 0 20 0.20 4 4 0 0 0 0
...TGGCGTCGCCTTTCTATTGGCCGCGC.............................................................................................................................................................................................................................. 26 1 20 0.20 4 4 0 0 0 0
.................................................................TGGCGGCGCTGCCGTCGCCCGTCGCT................................................................................................................................................................ 26 0 20 0.20 4 3 0 1 0 0
........TCGCCTTTCTATTGGCCGCCCATCGT......................................................................................................................................................................................................................... 26 0 20 0.20 4 3 1 0 0 0
.........................................................................................................TGTCATACCCAACTTTGCTCAAAT.......................................................................................................................... 24 0 20 0.20 4 4 0 0 0 0
...................................................CGCTTTCCTTGATCTGGCGGC................................................................................................................................................................................... 21 3 6 0.17 1 1 0 0 0 0
....................................................................................................................................................................................................................CAATGTATAATGTTGATTAATTTCATT............ 27 0 13 0.15 2 2 0 0 0 0
..................................................................................................................................................................................................................TTCAATGTATAATGTTGATTAATTTCATT............ 29 0 13 0.15 2 2 0 0 0 0
...................................................................................................................................................................................................................TCAATTTATAATGTTGATTAATTTCATT............ 28 1 13 0.15 2 2 0 0 0 0
.........................................................................CTGCCGTCGCCCGTCGCTCC.............................................................................................................................................................. 20 0 20 0.15 3 3 0 0 0 0
........................................................................................................TTGTCATACCCAACTTTGCTCAAAT.......................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0
.............................................................................CGTCGCCCGTCGCTCCCCTCAATCC..................................................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0
......................................................................GCGCTGCCGTCGCCCGTCGCT................................................................................................................................................................ 21 0 20 0.15 3 3 0 0 0 0
..................................................................................................................................................TATGCATACATATATTTGTTG.................................................................................... 21 0 7 0.14 1 0 1 0 0 0
...........................................................................................................TCATACCCAACTTTGCTCAAATTCTTC..................................................................................................................... 27 0 8 0.13 1 1 0 0 0 0
...............................................................................................................ACCCAACTTTGCTCAAATTCTTCCCACAT............................................................................................................... 29 0 8 0.13 1 1 0 0 0 0
...............................................................................................................ACCCAACTTTGCTCAAATTCTTCCCACA................................................................................................................ 28 0 8 0.13 1 1 0 0 0 0
...............................................................................................................ACCCAACTTTGCTCAAATTCTTCCCA.................................................................................................................. 26 0 8 0.13 1 1 0 0 0 0
.............................................................................................................ATACCCAACTTTGCTCAAATTCTTCC.................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0
............................................................................................................CATACCCAACTTTGCTCAAATTCTTC..................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0
...............................................................................................................ACCCAACTTTGCTCAAATTCTTCCCAC................................................................................................................. 27 0 8 0.13 1 1 0 0 0 0
............................................................................................................CATACCCAACTGTGCTCAAATTCTTCCCA.................................................................................................................. 29 1 8 0.13 1 1 0 0 0 0
.............................................................................................................ATACCCAACTTTGCTCAAATTCT....................................................................................................................... 23 0 9 0.11 1 1 0 0 0 0
......................................................................................................................TTTGCTCAAATTCTTCCCACATTACAT.......................................................................................................... 27 1 9 0.11 1 1 0 0 0 0
........................................................................................................TTGTCATACCCAACTTTGCTCAAATTCT....................................................................................................................... 28 0 9 0.11 1 1 0 0 0 0
........................................................................................................................TGCTCAAATTCTTCCCACATTACA........................................................................................................... 24 0 9 0.11 1 0 1 0 0 0
................................................................................................................................................................................TAATCTATTATTTAATAATAATTAGCC................................................ 27 0 9 0.11 1 1 0 0 0 0
...........................................................................................................TCATACCCAACTTTGCTCAAATTCTT...................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0
......................................................................................................................TTTGCTCAAATTCTTCCCACATTAC............................................................................................................ 25 0 9 0.11 1 1 0 0 0 0
..........................................................................................................GTCATACCCAACTTTGCTCAAATTCTT...................................................................................................................... 27 0 9 0.11 1 1 0 0 0 0
............................................................................................................CATACCCAACTTTGCTCAAATTCT....................................................................................................................... 24 0 9 0.11 1 1 0 0 0 0
........................................................................................................TTGTCATACCCAACTTTGCTCAAATTCTT...................................................................................................................... 29 0 9 0.11 1 1 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTTAATCCA.................................................................................................................................................... 29 1 10 0.10 1 1 0 0 0 0
...TGGCGCCGCCTTTCTATTGGCCGC................................................................................................................................................................................................................................ 24 1 20 0.10 2 0 2 0 0 0
.................................................................TGGCGGCGCTGCCGTCGCCCGTCGCTA............................................................................................................................................................... 27 1 20 0.10 2 2 0 0 0 0
.......................................................................CGCTGCCGTCGCCCGTCGCTCCCCTCAAT....................................................................................................................................................... 29 0 20 0.10 2 2 0 0 0 0
..................................................................GGCGGCGCTGCCGTCGCCCGTCGCT................................................................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0
...............TCTATTGGCCGCCCATCG.......................................................................................................................................................................................................................... 18 0 20 0.10 2 1 1 0 0 0
...............................................................TCTGGCGGCGCTGCCGTCGCCCGTCG.................................................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0
...............................................................TCTGGCGGCGCTGCCGTCGCCCGT.................................................................................................................................................................... 24 0 20 0.10 2 1 1 0 0 0
...........................................................................GCCGTCGCCCGTCGCTCCCC............................................................................................................................................................ 20 0 20 0.10 2 2 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCC.............................................................................................................................................................. 19 0 20 0.10 2 0 2 0 0 0
...............................................................................TCGCCCGTCGCTCCCCTCAATC...................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0
.......................................................................................................CTTGTCATACCCAACTTTGCTCAAA........................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0
...................................................................................................................AACTTTGCTCAAATTCTTCCCACAT............................................................................................................... 25 0 10 0.10 1 1 0 0 0 0
...TGGCGTCGCCTTTCTATTGGCCCC................................................................................................................................................................................................................................ 24 1 20 0.10 2 0 2 0 0 0
.........................................................................................................TGTCATACCCAACTTTGCTCAAATT......................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0
.................................................................TGGCGGCGCTGCCGTCGCCCGTC................................................................................................................................................................... 23 0 20 0.10 2 0 2 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAAA....................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0
.........CGCCTTTCTATTGGCCGCCCATCG.......................................................................................................................................................................................................................... 24 0 20 0.10 2 1 1 0 0 0
........................................................................................................................TGCTCAAATTCTTCCCACATTA............................................................................................................. 22 0 11 0.09 1 1 0 0 0 0
........................................................................................................................TGCTCAAATTCTTCCCACAT............................................................................................................... 20 0 11 0.09 1 1 0 0 0 0
......................................................................................................................TTTGCTCAAATTCTTCCCACA................................................................................................................ 21 0 11 0.09 1 1 0 0 0 0
.......................................................................................................................TTGCTCAAATTCTTCCCACATT.............................................................................................................. 22 0 11 0.09 1 1 0 0 0 0
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATTTAT......... 27 0 12 0.08 1 1 0 0 0 0
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATTTATA........ 28 0 12 0.08 1 1 0 0 0 0
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATGAAAA........ 28 3 12 0.08 1 1 0 0 0 0
.........................................................................................................................................................................................................................TATAATGTTGATTAATTTCATTTA.......... 24 0 12 0.08 1 1 0 0 0 0
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCA.............. 22 0 13 0.08 1 1 0 0 0 0
.........................................................................................................................................................................................................................TATAATGTTGATTAATTTCA.............. 20 0 13 0.08 1 1 0 0 0 0
.........................................................................................................................................................................................................................TATAATGTTGATTAATTTCAA............. 21 1 13 0.08 1 1 0 0 0 0
......................................................................................................................................................................................................................GTGTATAATGTTGATTAATTTCATT............ 25 1 13 0.08 1 1 0 0 0 0
..................................................................................................................................................................................................................TTCAATGTATAATGTTGATTAATTTCA.............. 27 0 13 0.08 1 0 1 0 0 0
.....................................................................................................................................................................................................................AATGTATAATGTTGATTAATTTCATT............ 26 0 13 0.08 1 1 0 0 0 0
...............................................................................................................................................................................................................TAATTCAATGTATAATGTTGATTAATT................. 27 0 14 0.07 1 1 0 0 0 0
...............................................................................................................................................................................................................TAATTCAATGTATAATGTTGATTA.................... 24 0 15 0.07 1 1 0 0 0 0
...............................................................................................................................................................................................................TAATTCAATGTATAATGTT......................... 19 0 17 0.06 1 1 0 0 0 0
.......................................................................................................................................................................................................................TGTATAATGTTGATTACTTTCATTT........... 25 1 18 0.06 1 0 1 0 0 0
............................................................................CCGTCGCCCGTCGCTCCCCTCAATGT..................................................................................................................................................... 26 2 20 0.05 1 1 0 0 0 0
.........................................................................................................TGTCATACCCAACTTTGCTCAAA........................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
...............................................................................TCGCCCGTCGCTCCCCTCAATCC..................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
...TGGCGTCGCCTTTCTATTGGCCGA................................................................................................................................................................................................................................ 24 1 20 0.05 1 0 1 0 0 0
........TCACCTTTCTATTGGCCGCCCATCGT......................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGATCCCCTCAATC...................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
.......................................................................CGCTGCCGTCGCCCGTCGCTCCCCTCA......................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
...TGGCGTCGCCTTTCTATTGGC................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
............................................................................CCGTCGCCCGTCGCTCCCCTCAAT....................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
........................................................................GCTGCCGTCGCCCGTCGCTC............................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCTA........................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
..........................................................................CGCCGTCGCCCGTCGCTCCCCTCAATC...................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
...TGGCGTCGCCTTTCTATTGGCCGCCC.............................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0
.................................................................TGGCGGCGCTGGCGTCGCCCGTCGC................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0
......................................................................CCGCTGCCGTCGCCCGTCGCTCCC............................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0
...TAGCGTCGCCTTTCTATTGGCCG................................................................................................................................................................................................................................. 23 1 20 0.05 1 0 0 0 0 1
.ATTGGCGTCGCCTTTCTATTGGCCG................................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
.............TTTCTATTGGCCGCGCTTCGTGTCCCGT.................................................................................................................................................................................................................. 28 2 20 0.05 1 1 0 0 0 0
...TGACGTCGCCTTTCTATTGGCC.................................................................................................................................................................................................................................. 22 1 20 0.05 1 0 1 0 0 0
.......................................................................CGCTGCCGTCGCCCGTCGCTCCCCTCAAA....................................................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0
..TTGGCGTCGCCTTTCTATTGGCCGCGC.............................................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0
..........GCCTTTCTATTGGCCGCCCATCGTTA....................................................................................................................................................................................................................... 26 2 20 0.05 1 1 0 0 0 0
...TGGCGTCGCCTTTCTATTGGCCGC................................................................................................................................................................................................................................ 24 0 20 0.05 1 0 0 0 0 1
..........................................................................TGCCGTCGCGCGTCGCTCCCCTCAAT....................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
...............................................................TCTGGCGGCGCTGCCGTCGCC....................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
CATTGGCGTCGCCTTTCTATTGG.................................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAATCT..................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
CATTGGCGTCGCCTTTCTATTGGC................................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.................................................................................TGCCGTCGCTCCCCTCAATC...................................................................................................................................................... 20 2 20 0.05 1 0 1 0 0 0
....................................................................CGGCGCTGCCGTCGCCCGTCGCTCCCC............................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0
..........................................................................TTCCGTCGCCCGTCGCTCCCCT........................................................................................................................................................... 22 1 20 0.05 1 0 1 0 0 0
..........................................................................TCCCGTCGCCCGTCGCTCCCCTCAATC...................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
.......................................................................CGCTGCCGTCGCCCGTCGCTCCC............................................................................................................................................................. 23 0 20 0.05 1 0 0 0 1 0
..TTGGAGTCGCCTTTCTATTGGCCGCCC.............................................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0
.................................................................TGGCGGCGCTGCCGTCGCCCGTCGA................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0
....................................................................CGGCGCTGCCGTCGCCCGTCGCTCC.............................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
..........................................................................TGCCGTCGCCCCTCGCTCCCCTCAATC...................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
............................................................................................................CATACCCAACTTTGCTCAA............................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0
...............................................................................TCGCCCGTCGCTCCCCTCA......................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0
.......................................................................CGCTGCCGTCGCCCGTCGCTCCCC............................................................................................................................................................ 24 0 20 0.05 1 0 1 0 0 0
...............................................................................TCGCCCGTCGCTCCCCTCAAT....................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
.....................................................................................................CCCTTGTCATACCCAACTTTGC................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCTG........................................................................................................................................................ 25 2 20 0.05 1 1 0 0 0 0
..........................................................................TGCCGTCGCCCGTCGATCCCCTC.......................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0
................................................................CTGGCGGCGCTGCCGTCGCCCGTCGC................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0
.....................................................................GGCGCTGCCGTCGCCCGTCGCTCCC............................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
................................................................................CGCCCGTCGCTCCCCTCAATC...................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
...........................................................................................................TCATACCCAACTTTGCTCAAAT.......................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
...TGGCGTCGCCTTTCTATTGGCAG................................................................................................................................................................................................................................. 23 1 20 0.05 1 0 1 0 0 0
......................................................................GCGCTGCCGTCGCCCGTCGCTCCC............................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
...CGGCGTCGCCTTTCTATTGGCCGC................................................................................................................................................................................................................................ 24 1 20 0.05 1 0 1 0 0 0
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAC........................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GTAACCGCAGCGGAAAGATAACCGGCGGGTAGCACAGGGCAACTGAAAACGACGAAAGGAAAGAGACCGCCGCGACGGCAGCGGGCAGCGAGGGGAGTTAGGTGAACAGTATGGGTTGAAACGAGTTTAAGAAGGGTGTAATGTTGATACGTATGTATATAAACAACATAAATTGAATTAGATAATAAATTATTATTAATCGGAATAATTAAGTTACATATTACAACTAATTAAAGTAAATATGGCGTTAG
***************************************************************************************************..............................................................................************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body
.......................GGCGGGTAGCACAGGGCAACTG.............................................................................................................................................................................................................. 22 0 1 4.00 4 4 0 0
.....................CCGGCGGGTAGCACAGGGCAACTG.............................................................................................................................................................................................................. 24 0 1 3.00 3 3 0 0
....................ACCGGCGGGTAGCACAGGGCAACTG.............................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0
...........................................................................................GGGGAGTTAGGTGAACAGTATGG......................................................................................................................................... 23 0 2 1.50 3 2 0 1
......................CGGCGGGTAGCACAGGGCAACTG.............................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0
..................................................................................................................................................................................................ATTAATCGGAATAATTAAGTTACATAT.............................. 27 0 1 1.00 1 1 0 0
............................................................................................GGGAGTTAGGTGAACAGTATGGGTT...................................................................................................................................... 25 0 2 1.00 2 2 0 0
.......................................................................................................................................................................................................TCGGAATAATTAAGTTACATATTACA.......................... 26 0 1 1.00 1 1 0 0
.........................CGGGTAGCACAGGGCAACTG.............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0
..........................GGGTAGCACAGGGCAACTGAAAA.......................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0
.....................................................................................CAGCGAGGGGAGTTAGGTGAACAG.............................................................................................................................................. 24 0 2 0.50 1 0 1 0
............................................................................................GGGAGTTAGGTGAACAGTATGG......................................................................................................................................... 22 0 2 0.50 1 1 0 0
.........................................................................................GAGGGGAGTTAGGTGAACAGTATGG......................................................................................................................................... 25 0 2 0.50 1 1 0 0
.....................................................................................................GTGAACAGTATGGGTTGAAACGAGT............................................................................................................................. 25 0 2 0.50 1 0 1 0
........................................................................................CGAGGGGAGTTAGGTGAACAG.............................................................................................................................................. 21 0 2 0.50 1 0 0 1
............................................................................................GGGAGTTAGGTGAACAGTATGGGT....................................................................................................................................... 24 0 2 0.50 1 0 1 0
....................................................................................GCAGCGAGGGGAGTTAGGTGAACAG.............................................................................................................................................. 25 0 2 0.50 1 0 0 1
.................................................................................................................................................................................................TATTAATCGGAATAATTAAGTTAC.................................. 24 0 2 0.50 1 1 0 0
.......................................................................................GCGAGGGGAGTTAGGTGAACAGTA............................................................................................................................................ 24 0 2 0.50 1 1 0 0
........................................................................................CGAGGGGAGTTAGGTGAACAGTA............................................................................................................................................ 23 0 2 0.50 1 0 0 1
............................................................................................GGGAGTTAGGTGAACAGTATGGG........................................................................................................................................ 23 0 2 0.50 1 1 0 0
.............................................................................................GGAGTTAGGTGAACAGTATGGGTT...................................................................................................................................... 24 0 2 0.50 1 0 1 0
..................................................GACGAAAGGAAAGAGACCGCCGC.................................................................................................................................................................................. 23 0 3 0.33 1 1 0 0
.....................................GGCAACTGAAAACGACGAAAGGAA.............................................................................................................................................................................................. 24 0 3 0.33 1 1 0 0
................................................................................................GTTAGGTGAACAGTATGGGTTGAA................................................................................................................................... 24 0 3 0.33 1 1 0 0
.........................CGGGTAGCACCGTGGAACTG.............................................................................................................................................................................................................. 20 3 3 0.33 1 1 0 0
....................................................................................................................TGAAACGAGTTTAAGAAGGGTGT................................................................................................................ 23 0 10 0.30 3 3 0 0
...................................................................................................................TTGAAACGAGTTTAAGAAGGGTG................................................................................................................. 23 0 10 0.30 3 0 3 0
...............................................................................................TGTTAGGTGAACAGTATGGGTTGAA................................................................................................................................... 25 1 4 0.25 1 1 0 0
.................................................................................................................GGTTGAAACGAGTTTAAGAAGGGTGT................................................................................................................ 26 0 8 0.25 2 2 0 0
..............................................................................................................ATGGGTTGAAACGAGTTTAAGAA...................................................................................................................... 23 0 9 0.22 2 2 0 0
.............................................................................................................TATGGGTTGAAACGAGTTTAAGAA...................................................................................................................... 24 0 9 0.22 2 2 0 0
.........................................................................................................ACAGTATGGGTTGAAACGAGTTTAAGAA...................................................................................................................... 28 0 9 0.22 2 1 0 1
...ACCGCAGCGGAAAGATAACC.................................................................................................................................................................................................................................... 20 0 20 0.20 4 4 0 0
.......................................................................................................................AACGAGTTTAAGAAGGGTGTAAT............................................................................................................. 23 0 11 0.18 2 1 0 1
.....................................................................................................................GAAACGAGTTTAAGAAGGGTGTAATGT........................................................................................................... 27 0 9 0.11 1 1 0 0
...................................................ACGAAAGGAAAGAGACAGCCGCGAC............................................................................................................................................................................... 25 1 10 0.10 1 0 1 0
...........................................................................................................AGTATGGGTTGAAACGAGTTT........................................................................................................................... 21 0 20 0.10 2 2 0 0
................................................................................................................GGGTTGAAACGAGTTTAAGAA...................................................................................................................... 21 0 10 0.10 1 0 1 0
...................................................................................................................TTGAAACGAGTTTAAGAAGGGTGT................................................................................................................ 24 0 10 0.10 1 1 0 0
....................................................................................................................TGAAACGAGTTTAAGAAGGGTGTAAT............................................................................................................. 26 0 10 0.10 1 1 0 0
...........................................................................................................AGTATAGGTTGAAACGAGTTTAAGA....................................................................................................................... 25 1 11 0.09 1 0 1 0
..................................................................................................................GTTGAAACGAGTTTAAGA....................................................................................................................... 18 0 11 0.09 1 1 0 0
................................................................................GCGGGCAGCGAGGGGAGTTA....................................................................................................................................................... 20 0 20 0.05 1 1 0 0
...........................................................................................................AGTATGGGTTGAAACGAGTTTAG......................................................................................................................... 23 1 20 0.05 1 1 0 0
................GATAACCGGCGCGAAGCACAGGGC................................................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0
....CCGCAGCGGAAAGATAACCGC.................................................................................................................................................................................................................................. 21 1 20 0.05 1 1 0 0
............................................................................................................GTATGGGTTGAAACGAGTTTA.......................................................................................................................... 21 0 20 0.05 1 1 0 0
.........................................................................................................ACAGTATGGGTTGAAACGAGTTT........................................................................................................................... 23 0 20 0.05 1 1 0 0
...ACCGCAGTGGAAAGATAACCG................................................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0
.........................................................................................................ACAGTATGGGTTGAAACGAGT............................................................................................................................. 21 0 20 0.05 1 1 0 0
.........................................................................................................ACAGTATCGGTTGAAACGAGTTTAA......................................................................................................................... 25 1 20 0.05 1 1 0 0
.........GCGGAAAGATAACCGGCGGGTA............................................................................................................................................................................................................................ 22 0 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004958:2475537-2475787 + dwi_3838 CATTGGCGTCGCCTTTCTATTGGCCGCCCATCGTGTCCCGTTGACTTTTGCTGCTTTCCTTTCTCTGGCGGCGCTGCCGTCGCCCGTCGCTCCCCTCAATCCACTTGTCATACCCAACTTTGCTCAAATTCTTCCCACATTACAACTATGCATACATATATTTGTTGTATTTAACTTAATCTATTATTTAATAATAATTAGCCTTATTAATTCAATGTATAATGTTGATTAATTTCATTTATACCGCAATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CATTGGCGTCGCCTTTCTATTGGCCGCCCATCGTGTCCCGTTGACTTTTGCTGCTTTCCTTTCTCTGGCGGCGCTGCCGTCGCCCGTCGCTCCCCTCAATCCACTTGTCATACCCAACTTTGCTCAAATTCTTCCCACATTACAACTATGCATACATATATTTGTTGTATTTAACTTAATCTATTATTTAATAATAATTAGCCTTATTAATTCAATGTATAATGTTGATTAATTTCATTTATACCGCAATCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................TTTGCTGCTTTCCTTTCTCTGGCGG....................................................................................................................................................................................25110.001006040
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAATC......................................................................................................................................................27204.90980710270
...................................TCCCGTTGACTTTTGCTGCTTTCCTT..............................................................................................................................................................................................2634.6714013010
.........................................TGACTTTTGCTGCTTTCCTTTCTCT.........................................................................................................................................................................................2514.00401030
.........................................TGACTTTTGCTGCTTTCCTTTCTC..........................................................................................................................................................................................2414.00403010
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATTTA..........26123.3340031090
...........................................................................................................................TCAAATTCTTCCCACATTACAACTATGCA...................................................................................................2923.00605010
.................................TGTCCCGTTGACTTTTGCTGCTTTCCT...............................................................................................................................................................................................2713.00303000
.........................................TGACTTTTGCTGCTTTCCTTTCTCTG........................................................................................................................................................................................2613.00303000
..............................TCGTGTCCCGTTGACTTTTGCTGCTT...................................................................................................................................................................................................2613.00302010
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAAT.......................................................................................................................................................26202.15430280150
.............................................................................CGTCGCCCGTCGCTCCCCTCAATCCA....................................................................................................................................................2612.00202000
.................TATTGGCCGCCCATCGTGTCCCGTTGACT.............................................................................................................................................................................................................2912.00202000
..................................................................................................................................................................................................TAATTAGCCTTATTAATTCAATGTATAA.............................2812.00202000
.............TTTCTATTGGCCGCCCATCGTGTCCCG...................................................................................................................................................................................................................2712.00202000
.............................................TTTTGCTGCTTTCCTTTCTCTGGCGG....................................................................................................................................................................................2612.00201010
.............TTTCTATTGGCCGCCCATCGTGTCC.....................................................................................................................................................................................................................2512.00202000
............................CATCGTGTCCCGTTGACTTTTGC........................................................................................................................................................................................................2312.00200020
...............................CGTGTCCCGTTGACTTTTGCTGCTT...................................................................................................................................................................................................2512.00201010
..............TTCTATTGGCCGCCCATCGTGTCCCG...................................................................................................................................................................................................................2612.00200020
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAA........................................................................................................................................................25201.85370250120
...................................TCCCGTTGACTTTTGCTGCTTTCCT...............................................................................................................................................................................................2531.67513010
................................................TGCTGCTTTCCTTTCTCTGGCGGCGC.................................................................................................................................................................................2621.50303000
...................................................TGCTTTCCTTTCTCTGGCGGCGCTG...............................................................................................................................................................................2531.33404000
..........................................................................TGCCGTCGCCCGTCGCTCCC.............................................................................................................................................................20201.2024024000
..........................................................................TGCCGTCGCCCGTCGCTCCCC............................................................................................................................................................21201.1523023000
.........................................................................................................TGTCATACCCAACTTTGCTCAAATTCT.......................................................................................................................2791.1110010000
..........................................GACTTTTGCTGCTTTCCTTTCTC..........................................................................................................................................................................................2311.00101000
..............................TCGTGTCCCGTTGACTTTTGCTGCTTT..................................................................................................................................................................................................2711.00100010
.................TATTGGCCGCCCATCGTGTCCCGTTG................................................................................................................................................................................................................2611.00101000
........................................................................................................................TGCTCAAATTCTTCCCACATTACAACT........................................................................................................2721.00202000
.........................................TGACTTTTGCTGCTTTCCTTTCTCTT........................................................................................................................................................................................2611.00101000
.................................................................................................................................................................................................................................TGATTAATTTCATTTATACCGCAATC2611.00101000
....................................................................................................................................TCCCACATTACAACTATGCATACATA.............................................................................................2621.00202000
.................TATTGGCCGCCCATCGTGTCCCGTA.................................................................................................................................................................................................................2511.00101000
...........................CCATCGTGTCCCGTTGACTTTTGC........................................................................................................................................................................................................2411.00100010
.............................ATCGTGTCCCGTTGACTTTTGCTGCTT...................................................................................................................................................................................................2711.00100010
.............................ATCGTGTCCCGTTGACTTTTGCTG......................................................................................................................................................................................................2411.00101000
.....................................................................................................CACTTGTCATACCCAACTTTGCTCAAAT..........................................................................................................................2821.00202000
.................................TGTCCCGTTGACTTTTGCTGCTTTCC................................................................................................................................................................................................2611.00101000
............................................................................................................................................TACAACTATGCATACATATATTTGTTG....................................................................................2721.00202000
............................CATCGTGTCCCGTTGACTTTTGCTG......................................................................................................................................................................................................2511.00101000
.............TTTCTATTGGCCGCCCATCGTGTCCC....................................................................................................................................................................................................................2611.00101000
..............TTCTATTGGCCGCCCATCGTGTCCCGTTA................................................................................................................................................................................................................2911.00101000
..............................TCGTGTCCCGTTGACTTTTGCTGCTTA..................................................................................................................................................................................................2711.00100010
....................TGGCCGCCCATCGTGTCCCGTTGACTT............................................................................................................................................................................................................2711.00101000
............................CATCGTGTCCCGTTGACTTTTG.........................................................................................................................................................................................................2211.00101000
..........................................GACTTTTGCTGCTTTCCTTTCTCTGG.......................................................................................................................................................................................2611.00101000
....................TGGCCGCCCATCGTGTCCCGTTGACTTT...........................................................................................................................................................................................................2811.00101000
..........................................................................................TCCCCTCAATCCACTTGTCATACCCAAC.....................................................................................................................................2821.00202000
..................................GTCCCGTTGACTTTTGCTGCTTTCCTT..............................................................................................................................................................................................2711.00101000
....................................................................................CGTCGCTCCCCTCAATCCACTTGTCA.............................................................................................................................................2621.00201010
..........................................GACTTTTGCTGCTTTCCTTTCTCTT........................................................................................................................................................................................2511.00101000
...............TCTATTGGCCGCCCATCGTGTCCCGTTAT...............................................................................................................................................................................................................2911.00101000
..............TTCTATTGGCCGCCCATCGTGTCCCGT..................................................................................................................................................................................................................2711.00101000
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCA.........................................................................................................................................................24200.9519019000
.........................................................................................................TGTCATACCCAACTTTGCTCAAATTC........................................................................................................................2690.67606000
...................................TCCCGTTGACTTTTGCTGCTTTCCTTT.............................................................................................................................................................................................2730.67202000
..............................................................................................................TACCCAACTTTGCTCAAATTCTTCCCA..................................................................................................................2780.63505000
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATT............24130.62807010
........TCGCCTTTCTATTGGCCGCCCATCG..........................................................................................................................................................................................................................25200.601208040
..........................................................................TGCCGTCGCCCGTCGCTCCCCT...........................................................................................................................................................22200.5511011000
.............................................................TCTCTGGCGGCGCTGCCGTCGCCCG.....................................................................................................................................................................2520.50101000
..................................................................................CCCGTCGCTCCCCTCAATCCACTTG................................................................................................................................................2520.50101000
...............................................................................TCGCCCGTCGCTCCCCTCAATCCACT..................................................................................................................................................2620.50100010
...........................................................................................................................TCAAATTCTTCCCACATTACAACTATG.....................................................................................................2720.50101000
................................................TGCTGCTTTCCTTTCTCTGGCGGCG..................................................................................................................................................................................2520.50101000
............................................................................................................................CAAATTCTTCCCACATTACAACTATGCA...................................................................................................2820.50101000
..................................................................................................................................CTTCCCACATTACAACTATGCA...................................................................................................2220.50101000
...................................................................................................................................TTCCCACATTACAACTATGCATACATA.............................................................................................2720.50101000
...............................................................................................................................................................................................TAATAATTAGCCTTATTAATTCAATGTA................................2820.50101000
..........................................................................TGCCGTCGCCCGTCGCTCCCCTC..........................................................................................................................................................23200.5010010000
...................................................................................................TCCACTTGTCATACCCAACTTTGC................................................................................................................................2420.50101000
...............................................................................TCGCCCGTCGCTCCCCTCAATCCACTTG................................................................................................................................................2820.50100010
................................................................................CGCCCGTCGCTCCCCTCAATCCACT..................................................................................................................................................2520.50101000
...........................................................................................CCCCTCAATCCACTTGTCATACCCAACTT...................................................................................................................................2920.50101000
................................................................................CGCCCGTCGCTCCCCTCAATCCACTTGT...............................................................................................................................................2820.50100010
........................................................................................................................TGCTCAAATTCTTCCCACATTACAAC.........................................................................................................2620.50101000
.........................................TGACTTTTGCTGCTTTCCTTTCTCTA........................................................................................................................................................................................2620.50101000
...................................................................................................TCCACTTGTCATACCCAACTTTGCT...............................................................................................................................2520.50101000
.....................................................................................................CACTTGTCATACCCAACTTTGCTCAAA...........................................................................................................................2720.50101000
............................................................TTCTCTGGCGGCGCTGCCGTCGCCC......................................................................................................................................................................2520.50101000
..TTGGCGTCGCCTTTCTATTGGCCGC................................................................................................................................................................................................................................25200.5010000100
............................................................................................................................CAAATTCTTCCCACATTACAACTA.......................................................................................................2420.50101000
................................................................................CGCCCGTCGCTCCCCTCAATCCA....................................................................................................................................................2320.50101000
...............................................................................................................................ATTCTTCCCACATTACAACTATGCA...................................................................................................2520.50100010
..........................................................................................TCCCCTCAATCCACTTGTCATACCCAACT....................................................................................................................................2920.50101000
...........................................................................................................................................TTACAACTATGCATACATATATTTGTTG....................................................................................2820.50101000
..............................................................................................................................................CAACTATGCATACATATATTTGTTG....................................................................................2520.50101000
................................................................................CGCCCGTCGCTCCCCTCAATCCACTTG................................................................................................................................................2720.50101000
..................................................................................................ATCCACTTGTCATACCCAACTTTGCTCA.............................................................................................................................2820.50100010
...............................................................................................TCAATCCACTTGTCATACCCAACTTTG.................................................................................................................................2720.50101000
..............................................................................................................TACCCAACTTTGCTCAAATTCTTCCC...................................................................................................................2680.50404000
........................................................................................................................TGCTCAAATTCTTCCCACATTACAACTA.......................................................................................................2820.50101000
.................................................................TGGCGGCGCTGCCGTCGCCCGTCGCTC...............................................................................................................................................................27200.45909000
.........................................................................................................TGTCATACCCAACTTTGCTCAAATTCTT......................................................................................................................2890.44404000
..TTGGCGTCGCCTTTCTATTGGCCG.................................................................................................................................................................................................................................24200.40800080
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATTT...........25130.38504010
..............................................................................................................TACCCAACTTTGCTCAAATTCTTCC....................................................................................................................2580.38303000
..............................................................................................................TACCCAACTTTGCTCAAATTCTTCCCAC.................................................................................................................2880.38302010
..............................................................................................................TACCCAACTTTGCTCAAATTCTTCCCACA................................................................................................................2980.38303000
.............................................................................CGTCGCCCGTCGCTCCCCTCAATC......................................................................................................................................................24200.35700070
...................................TCCCGTTGACTTTTGCTGCTTT..................................................................................................................................................................................................2230.33101000
...................................TCCCGTTGACTTTTGCTGCTTTCC................................................................................................................................................................................................2430.33101000
...................................................TGCTTTCCTTTCTCTGGCGGCGCTGC..............................................................................................................................................................................2630.33100010
...................................TCCCGTTGACTTTTGCTGCTTTCCTTA.............................................................................................................................................................................................2730.33101000
.......................................................................CGCTGCCGTCGCCCGTCGCTC...............................................................................................................................................................21200.30606000
...........................................................................GCCGTCGCCCGTCGCTCCCCTCAATC......................................................................................................................................................26200.30605010
.................................................................TGGCGGCGCTGCCGTCGCCCGTCG..................................................................................................................................................................24200.25505000
........................................................................................................................................................TACATATATTTGTTGTATTTAACTTAATC......................................................................2940.25101000
..................................................................................................................CAACTTTGCTCAAATTCTTCCCACAT...............................................................................................................2680.25201010
...................................................................................................................................................................................................................TCAATGTATAATGTTGATTAATTTCATT............28130.23303000
...........................................................................................................TCATACCCAACTTTGCTCAAATTCT.......................................................................................................................2590.22202000
........................................................................................................TTGTCATACCCAACTTTGCTCAAATTC........................................................................................................................2790.22202000
...................................................................................................................AACTTTGCTCAAATTCTTCCCACATTA.............................................................................................................27100.20202000
...........................................................................GCCGTCGCCCGTCGCTCCCCTCAA........................................................................................................................................................24200.20404000
.................................................................TGGCGGCGCTGCCGTCGCCCGTCGCT................................................................................................................................................................26200.20413000
........TCGCCTTTCTATTGGCCGCCCATCGT.........................................................................................................................................................................................................................26200.20403010
.........................................................................................................TGTCATACCCAACTTTGCTCAAAT..........................................................................................................................24200.20404000
....................................................................................................................................................................................................................CAATGTATAATGTTGATTAATTTCATT............27130.15202000
..................................................................................................................................................................................................................TTCAATGTATAATGTTGATTAATTTCATT............29130.15202000
.........................................................................CTGCCGTCGCCCGTCGCTCC..............................................................................................................................................................20200.15303000
........................................................................................................TTGTCATACCCAACTTTGCTCAAAT..........................................................................................................................25200.15303000
.............................................................................CGTCGCCCGTCGCTCCCCTCAATCC.....................................................................................................................................................25200.15303000
......................................................................GCGCTGCCGTCGCCCGTCGCT................................................................................................................................................................21200.15303000
..................................................................................................................................................TATGCATACATATATTTGTTG....................................................................................2170.14100010
...........................................................................................................TCATACCCAACTTTGCTCAAATTCTTC.....................................................................................................................2780.13101000
...............................................................................................................ACCCAACTTTGCTCAAATTCTTCCCACAT...............................................................................................................2980.13101000
...............................................................................................................ACCCAACTTTGCTCAAATTCTTCCCACA................................................................................................................2880.13101000
...............................................................................................................ACCCAACTTTGCTCAAATTCTTCCCA..................................................................................................................2680.13101000
.............................................................................................................ATACCCAACTTTGCTCAAATTCTTCC....................................................................................................................2680.13101000
............................................................................................................CATACCCAACTTTGCTCAAATTCTTC.....................................................................................................................2680.13101000
...............................................................................................................ACCCAACTTTGCTCAAATTCTTCCCAC.................................................................................................................2780.13101000
.............................................................................................................ATACCCAACTTTGCTCAAATTCT.......................................................................................................................2390.11101000
......................................................................................................................TTTGCTCAAATTCTTCCCACATTACAT..........................................................................................................2790.11101000
........................................................................................................TTGTCATACCCAACTTTGCTCAAATTCT.......................................................................................................................2890.11101000
........................................................................................................................TGCTCAAATTCTTCCCACATTACA...........................................................................................................2490.11100010
................................................................................................................................................................................TAATCTATTATTTAATAATAATTAGCC................................................2790.11101000
...........................................................................................................TCATACCCAACTTTGCTCAAATTCTT......................................................................................................................2690.11101000
......................................................................................................................TTTGCTCAAATTCTTCCCACATTAC............................................................................................................2590.11101000
..........................................................................................................GTCATACCCAACTTTGCTCAAATTCTT......................................................................................................................2790.11101000
............................................................................................................CATACCCAACTTTGCTCAAATTCT.......................................................................................................................2490.11101000
........................................................................................................TTGTCATACCCAACTTTGCTCAAATTCTT......................................................................................................................2990.11101000
.................................................................TGGCGGCGCTGCCGTCGCCCGTCGCTA...............................................................................................................................................................27200.10202000
.......................................................................CGCTGCCGTCGCCCGTCGCTCCCCTCAAT.......................................................................................................................................................29200.10202000
..................................................................GGCGGCGCTGCCGTCGCCCGTCGCT................................................................................................................................................................25200.10202000
...............TCTATTGGCCGCCCATCG..........................................................................................................................................................................................................................18200.10201010
...............................................................TCTGGCGGCGCTGCCGTCGCCCGTCG..................................................................................................................................................................26200.10202000
...............................................................TCTGGCGGCGCTGCCGTCGCCCGT....................................................................................................................................................................24200.10201010
...........................................................................GCCGTCGCCCGTCGCTCCCC............................................................................................................................................................20200.10202000
..........................................................................TGCCGTCGCCCGTCGCTCC..............................................................................................................................................................19200.10200020
...............................................................................TCGCCCGTCGCTCCCCTCAATC......................................................................................................................................................22200.10202000
.......................................................................................................CTTGTCATACCCAACTTTGCTCAAA...........................................................................................................................25200.10202000
...................................................................................................................AACTTTGCTCAAATTCTTCCCACAT...............................................................................................................25100.10101000
.........................................................................................................TGTCATACCCAACTTTGCTCAAATT.........................................................................................................................25200.10202000
.................................................................TGGCGGCGCTGCCGTCGCCCGTC...................................................................................................................................................................23200.10200020
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAAA.......................................................................................................................................................26200.10200020
.........CGCCTTTCTATTGGCCGCCCATCG..........................................................................................................................................................................................................................24200.10201010
........................................................................................................................TGCTCAAATTCTTCCCACATTA.............................................................................................................22110.09101000
........................................................................................................................TGCTCAAATTCTTCCCACAT...............................................................................................................20110.09101000
......................................................................................................................TTTGCTCAAATTCTTCCCACA................................................................................................................21110.09101000
.......................................................................................................................TTGCTCAAATTCTTCCCACATT..............................................................................................................22110.09101000
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATTTAT.........27120.08101000
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCATTTATA........28120.08101000
.........................................................................................................................................................................................................................TATAATGTTGATTAATTTCATTTA..........24120.08101000
.......................................................................................................................................................................................................................TGTATAATGTTGATTAATTTCA..............22130.08101000
.........................................................................................................................................................................................................................TATAATGTTGATTAATTTCA..............20130.08101000
.........................................................................................................................................................................................................................TATAATGTTGATTAATTTCAA.............21130.08101000
..................................................................................................................................................................................................................TTCAATGTATAATGTTGATTAATTTCA..............27130.08100010
.....................................................................................................................................................................................................................AATGTATAATGTTGATTAATTTCATT............26130.08101000
...............................................................................................................................................................................................................TAATTCAATGTATAATGTTGATTAATT.................27140.07101000
...............................................................................................................................................................................................................TAATTCAATGTATAATGTTGATTA....................24150.07101000
...............................................................................................................................................................................................................TAATTCAATGTATAATGTT.........................19170.06101000
............................................................................CCGTCGCCCGTCGCTCCCCTCAATGT.....................................................................................................................................................26200.05101000
.........................................................................................................TGTCATACCCAACTTTGCTCAAA...........................................................................................................................23200.05101000
...............................................................................TCGCCCGTCGCTCCCCTCAATCC.....................................................................................................................................................23200.05100010
...TGGCGTCGCCTTTCTATTGGCCGA................................................................................................................................................................................................................................24200.05100010
.......................................................................CGCTGCCGTCGCCCGTCGCTCCCCTCA.........................................................................................................................................................27200.05101000
...TGGCGTCGCCTTTCTATTGGC...................................................................................................................................................................................................................................21200.05100010
............................................................................CCGTCGCCCGTCGCTCCCCTCAAT.......................................................................................................................................................24200.05101000
........................................................................GCTGCCGTCGCCCGTCGCTC...............................................................................................................................................................20200.05101000
...TGGCGTCGCCTTTCTATTGGCCGCCC..............................................................................................................................................................................................................................26200.05101000
.ATTGGCGTCGCCTTTCTATTGGCCG.................................................................................................................................................................................................................................25200.05101000
.......................................................................CGCTGCCGTCGCCCGTCGCTCCCCTCAAA.......................................................................................................................................................29200.05101000
..........GCCTTTCTATTGGCCGCCCATCGTTA.......................................................................................................................................................................................................................26200.05101000
...TGGCGTCGCCTTTCTATTGGCCGC................................................................................................................................................................................................................................24200.05100001
...............................................................TCTGGCGGCGCTGCCGTCGCC.......................................................................................................................................................................21200.05101000
CATTGGCGTCGCCTTTCTATTGG....................................................................................................................................................................................................................................23200.05101000
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAATCT.....................................................................................................................................................28200.05101000
CATTGGCGTCGCCTTTCTATTGGC...................................................................................................................................................................................................................................24200.05101000
....................................................................CGGCGCTGCCGTCGCCCGTCGCTCCCC............................................................................................................................................................27200.05101000
.......................................................................CGCTGCCGTCGCCCGTCGCTCCC.............................................................................................................................................................23200.05100100
.................................................................TGGCGGCGCTGCCGTCGCCCGTCGA.................................................................................................................................................................25200.05101000
....................................................................CGGCGCTGCCGTCGCCCGTCGCTCC..............................................................................................................................................................25200.05101000
............................................................................................................CATACCCAACTTTGCTCAA............................................................................................................................19200.05101000
...............................................................................TCGCCCGTCGCTCCCCTCA.........................................................................................................................................................19200.05100010
.......................................................................CGCTGCCGTCGCCCGTCGCTCCCC............................................................................................................................................................24200.05100010
...............................................................................TCGCCCGTCGCTCCCCTCAAT.......................................................................................................................................................21200.05101000
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCTG........................................................................................................................................................25200.05101000
................................................................CTGGCGGCGCTGCCGTCGCCCGTCGC.................................................................................................................................................................26200.05101000
.....................................................................GGCGCTGCCGTCGCCCGTCGCTCCC.............................................................................................................................................................25200.05101000
................................................................................CGCCCGTCGCTCCCCTCAATC......................................................................................................................................................21200.05101000
...........................................................................................................TCATACCCAACTTTGCTCAAAT..........................................................................................................................22200.05101000
......................................................................GCGCTGCCGTCGCCCGTCGCTCCC.............................................................................................................................................................24200.05101000
..........................................................................TGCCGTCGCCCGTCGCTCCCCTCAC........................................................................................................................................................25200.05101000

Generated: 05/18/2015 at 08:33 AM