ID:

dwi_3803

 Coordinate:

scf2_1100000004956:461711-461861 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.6 -18.3 -18.3 -18.2

Flybase annnotation

CDS [Dwil\GK16015-cds]; exon [dwil_GLEANR_16301:1]; intron [Dwil\GK16015-in]

No Repeatable elements found

mature
  1. scf2_1100000008199:897-917 +
  2. scf2_1100000013644:385-405 +
  3. scf2_1100000014327:205-225 +
  4. scf2_1100000014327:337-357 +
  5. scf2_1100000004542:151653-151673 +
  6. scf2_1100000004615:55579-55599 +
  7. scf2_1100000004620:337735-337755 +
  8. scf2_1100000012188:1231-1251 +
  9. scf2_1100000004828:25883-25903 +
  10. scf2_1100000004852:270916-270936 +
  11. scf2_1100000004876:34113-34133 +
  12. scf2_1100000004943:81363-81383 +
  13. scf2_1100000004947:1184511-1184531 +
  14. scf2_1100000004936:1343663-1343683 +
  15. scf2_1100000004949:777999-778019 +
  16. scf2_1100000004961:3233737-3233757 +
  17. scf2_1100000004968:1158528-1158548 +
  18. scf2_1100000004968:1445354-1445374 +
  19. scf2_1100000004968:2882904-2882924 +
  20. scf2_1100000001050:4325-4345 +
  21. scf2_1100000010501:880-900 -
  22. scf2_1100000004736:14670-14690 -
  23. scf2_1100000009341:598-618 -
  24. scf2_1100000004379:1916-1936 -
  25. scf2_1100000004820:30882-30902 -
  26. scf2_1100000004941:288022-288042 -
  27. scf2_1100000004943:514304-514324 -
  28. scf2_1100000004928:200715-200735 -
  29. scf2_1100000004933:157311-157331 -
  30. scf2_1100000004949:2123688-2123708 -
  31. scf2_1100000004956:398520-398540 -
  32. scf2_1100000004956:454106-454126 -
  33. dwi_3803  scf2_1100000004956:461764-461784 -
  34. scf2_1100000004956:973270-973290 -
  35. scf2_1100000004961:2143454-2143474 -
  36. scf2_1100000004961:2577339-2577359 -
  37. scf2_1100000004965:502048-502068 -
  38. scf2_1100000004967:4600120-4600140 -
  39. scf2_1100000004967:4605627-4605647 -
  40. scf2_1100000004968:1559489-1559509 -
  41. scf2_1100000010281:929-949 +
  42. scf2_1100000001524:4626-4646 +
  43. scf2_1100000011104:743-763 +
  44. scf2_1100000002254:3632-3652 +
  45. scf2_1100000004712:30770-30790 +
  46. scf2_1100000004813:52810-52830 +
  47. scf2_1100000004931:14269-14289 +
  48. scf2_1100000004937:70989-71009 +
  49. scf2_1100000004949:992413-992433 +
  50. scf2_1100000004949:1541587-1541607 +
  51. scf2_1100000004952:352149-352169 +
  52. scf2_1100000004952:588666-588686 +
  53. scf2_1100000004958:1524880-1524900 +
  54. scf2_1100000004958:2065697-2065717 +
  55. scf2_1100000004961:4041463-4041483 +
  56. scf2_1100000004965:197309-197329 +
  57. scf2_1100000004967:4505868-4505888 +
  58. scf2_1100000004968:2895450-2895470 +
  59. scf2_1100000005056:1312-1332 +
  60. scf2_1100000001154:7821-7841 +
  61. scf2_1100000001213:369-389 +
  62. scf2_1100000005236:764-784 +
  63. scf2_1100000008995:1112-1132 +
  64. scf2_1100000014146:1209-1229 +
  65. scf2_1100000011937:1407-1427 +
  66. scf2_1100000009420:1896-1916 +
  67. scf2_1100000004756:41802-41822 +
  68. scf2_1100000004832:141713-141733 +
  69. scf2_1100000004888:628657-628677 +
  70. scf2_1100000004909:223173-223193 +
  71. scf2_1100000004912:53638-53658 +
  72. scf2_1100000004936:545299-545319 +
  73. scf2_1100000004957:2102-2122 +
  74. scf2_1100000004961:380184-380204 +
  75. scf2_1100000004961:383694-383714 +
  76. scf2_1100000004961:3595123-3595143 +
  77. scf2_1100000004961:5419049-5419069 +
  78. scf2_1100000004967:2934191-2934211 +
  79. scf2_1100000010155:415-435 +
star
  1. scf2_1100000011937:1333-1356 +
  2. scf2_1100000004897:20664-20687 +
  3. scf2_1100000004912:53564-53587 +
  4. scf2_1100000004936:219682-219705 -
  5. dwi_3803  scf2_1100000004956:461835-461858 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCAACAACGCGTACTTTTCGGTGGTGTCGCCGACCCCACTGAATGCTAACGTAAGCAATAACATCGAAAGTGCCAGCCACTCAGCAATCAACAGCAACTTACCGTGGAGAGAGCAGTGTGCTTCTCCATCAATATCGATAACTGGGTCACCGATTGCACCGACCAGCACCGTCAGCTCGTTGACAGCAACTACTGCAACGTCTGCCGAAGTATTGACCTGCCTCAAGCCGTCAAGGACAAGTCGCCCAGAG
*****************************************************............((............(((((..(((..............((((((.((((.....)))))))))).......)))..)))))))******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
...............................................................................................................................................................................................................................CAAGCCGTCAAGGACAAGTCGCCCAGA. 27 0 2 0.50 1 1 0 0 0
...............................................................................................................................ATCAATATCGATAACTGGGTC....................................................................................................... 21 0 20 0.30 6 6 0 0 0
.....................................................AGCAATAACATCGAAAGTGCCAGC.............................................................................................................................................................................. 24 0 5 0.20 1 1 0 0 0
....................................................................................................................................................ACCGATTGCACCGACCAGCACCGTC.............................................................................. 25 0 20 0.15 3 3 0 0 0
............................................................................................................................TCCATCAATATCGATAACTGGGTCA...................................................................................................... 25 0 20 0.15 3 3 0 0 0
..........................................................................................................................TCTCCATCAATATCGATAACTGGG......................................................................................................... 24 0 20 0.15 3 3 0 0 0
......................................................................................................................................................................................ACAGCAACTACTGCAACGTCTGCCGAAG......................................... 28 0 20 0.15 3 3 0 0 0
..................................................................................................TTACCGTGGAGAGAGCAGTGTGCTTC............................................................................................................................... 26 0 20 0.10 2 2 0 0 0
......................................................................................ATCAACAGCAACTTACCGTGGAGAGAG.......................................................................................................................................... 27 0 20 0.10 2 0 2 0 0
..................................................................................................................................................TCACCGATTGCACCGACCAGCACCGT............................................................................... 26 0 20 0.10 2 2 0 0 0
..............................................................................................CAACTTACCGTGGAGAGAGCA........................................................................................................................................ 21 0 20 0.10 2 2 0 0 0
.................................................................................................CTTACCGTGGAGAGAGCAGTGTG................................................................................................................................... 23 0 20 0.10 2 2 0 0 0
.....................................................................................................................................................CCGATTGCACCGACCAGCAC.................................................................................. 20 0 20 0.10 2 2 0 0 0
.......................................................................................TCAACAGCAACTTACCGTGGAGAGA........................................................................................................................................... 25 0 20 0.10 2 2 0 0 0
......................................................................................................................................................................................ACAGCAACTACTGCAACGTCT................................................ 21 0 20 0.10 2 2 0 0 0
...ACAACGCGTACTTTTCGGTGG................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................CGTCTGCCGAAGTATTGACCTGCCTCAA......................... 28 0 20 0.05 1 1 0 0 0
......................................................................................................................TGCTTCTCCATCAATATCGATAA.............................................................................................................. 23 0 20 0.05 1 1 0 0 0
..............................................................................................CAACTTACCGTGGAGAGAGCAG....................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
...........................CGCCGACCCCACTGAATGCTAACGTAA..................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
....................................................................................................................................................ACCGATTGCACCGACCAGCA................................................................................... 20 0 20 0.05 1 1 0 0 0
..........GTGCTTTTCGGTGGTGTCG.............................................................................................................................................................................................................................. 19 1 20 0.05 1 0 0 0 1
...............................................................................................................................ATCAATATCGATAACTGGGT........................................................................................................ 20 0 20 0.05 1 1 0 0 0
......................................................................................ATCAACAGCAACTTACCGTGGAGAGA........................................................................................................................................... 26 0 20 0.05 1 0 0 1 0
.......................GTGTCGCCGACCCCACTGAATGCTAAC......................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
......................................................................TGCCAGCCACTCAGCAATCAACAGCAAC......................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0
........................................................................................CAACAGCAACTTACCGTGGAGCG............................................................................................................................................ 23 1 20 0.05 1 0 1 0 0
.........................................................................................................................................ATAACTGGGTCACCGATTGCA............................................................................................. 21 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................................................GCAACGTCTGCCGAAGTATTG.................................... 21 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................CAGCAACTACTGCAACGTCTGCCGAAGT........................................ 28 0 20 0.05 1 1 0 0 0
.....................TGGTGTCGCCGACCCCACTGT................................................................................................................................................................................................................. 21 1 20 0.05 1 1 0 0 0
..................................................................................................TTACCGTGGAGAGAGCAGTGTGCTTCT.............................................................................................................................. 27 0 20 0.05 1 0 0 1 0
.....................................................................................AATCAACAGCAACTTACCGTGGAGA............................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
........................TGTCGCCGACCCCACTGAATGCT............................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0
.........................................................................................AACAGCAACTTACCGTGGAGA............................................................................................................................................. 21 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

CGTTGTTGCGCATGAAAAGCCACCACAGCGGCTGGGGTGACTTACGATTGCATTCGTTATTGTAGCTTTCACGGTCGGTGAGTCGTTAGTTGTCGTTGAATGGCACCTCTCTCGTCACACGAAGAGGTAGTTATAGCTATTGACCCAGTGGCTAACGTGGCTGGTCGTGGCAGTCGAGCAACTGTCGTTGATGACGTTGCAGACGGCTTCATAACTGGACGGAGTTCGGCAGTTCCTGTTCAGCGGGTCTC
*******************************************************************************************************............((............(((((..(((..............((((((.((((.....)))))))))).......)))..)))))))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body		 M020
head
 V119
head
................................................................................................................................................CCAGTGGCTAACGTGGCTGGTCGT................................................................................... 24 0 20 2.40 48 35 13 0 0 0
....................................................................................................................................................................TCGTGGCAGTCGAGCAACTGT.................................................................. 21 0 20 2.05 41 41 0 0 0 0
................................................................................................TGAATGGCACCTCTCTCGTCACACGA................................................................................................................................. 26 0 20 1.75 35 0 35 0 0 0
............................................................................................................CTCTCGTCACACGAAGAGGTAGTTAT..................................................................................................................... 26 0 20 1.60 32 0 32 0 0 0
......................................................................................................................................................................................................GCAGACGGCTTCATAACTGGACGGAGT.......................... 27 0 20 1.00 20 0 20 0 0 0
..........................................................................................................................................ATTGACCCAGTGGCTAACGTGGCTGGT...................................................................................... 27 0 20 0.80 16 16 0 0 0 0
.........................................................................................................................................................................................CGTTGATGACGTTGCAGACGGCTT.......................................... 24 0 20 0.80 16 0 16 0 0 0
.......................................................................................................................................GCTATTGACCCAGTGGCTAACGTGGC.......................................................................................... 26 0 20 0.70 14 14 0 0 0 0
.............................................................................................................................................GACCCAGTGGCTAACGTGGCTGGTCGT................................................................................... 27 0 20 0.65 13 13 0 0 0 0
.............................................................................................CGTTGAATGGCACCTCTCTCGTCACAC................................................................................................................................... 27 0 20 0.65 13 13 0 0 0 0
...............................................................................................................................................................GCTGGTCGTGGCAGTCGAGCAACTGT.................................................................. 26 0 20 0.65 13 13 0 0 0 0
...................................................................................................................CACACGAAGAGGTAGTTATAGCTATT.............................................................................................................. 26 0 20 0.65 13 13 0 0 0 0
..........................................................................................................................AGAGGTAGTTATAGCTATTGACCCAGT...................................................................................................... 27 0 20 0.65 13 0 13 0 0 0
.......................................................................................................................................................................................................CAGACGGCTTCATAACTGGACGGAGT.......................... 26 0 20 0.65 13 13 0 0 0 0
...........................................................................CGGTGAGTCGTTAGTTGTCGTTGAAT...................................................................................................................................................... 26 0 20 0.45 9 0 9 0 0 0
.............................GGCTGGGGTGACTTACGATTGCAT...................................................................................................................................................................................................... 24 0 20 0.45 9 2 7 0 0 0
..........................................................................................TGTCGTTGAATGGCACCTCTCTCGT........................................................................................................................................ 25 0 20 0.45 9 9 0 0 0 0
...................................................................................................................................................................................................GTTGCAGACGGCTTCATAACTGGAC............................... 25 0 20 0.45 9 6 3 0 0 0
..........................................................................................................CTCTCTCGTCACACGAAGAGGTAGTT....................................................................................................................... 26 0 20 0.40 8 0 8 0 0 0
....................................................................................................................................................TGGCTAACGTGGCTGGTCGTGGCAGT............................................................................. 26 0 20 0.40 8 0 8 0 0 0
...................................................................................CGTTAGTTGTCGTTGAATGGCAC................................................................................................................................................. 23 0 20 0.35 7 7 0 0 0 0
........................................................................................................................................................................................TCGTTGATGACGTTGCAGACGGCTT.......................................... 25 0 20 0.35 7 0 7 0 0 0
....................................................................................................................................................................TCGTGGCAGTCGAGCAACTGTCGT............................................................... 24 0 20 0.35 7 0 7 0 0 0
................................................................................................................................................................................................GACGTTGCAGACGGCTTCATAACTGGAC............................... 28 0 20 0.30 6 0 6 0 0 0
.................................................................................................................................................................TGGTCGTGGCAGTCGAGCAACTGTCGT............................................................... 27 0 20 0.30 6 0 6 0 0 0
.................................................................................................................................................CAGTGGCTAACGTGGCTGGTCGT................................................................................... 23 0 20 0.30 6 0 6 0 0 0
.....................................................................................................................................................................CGTGGCAGTCGAGCAACTGTCGTTGAT........................................................... 27 0 20 0.30 6 6 0 0 0 0
....................................................................................................................................................................TCGTGGCAGTCGAGCAACT.................................................................... 19 0 20 0.30 6 6 0 0 0 0
.......................................................................................AGTTGTCGTTGAATGGCACCTCTCT........................................................................................................................................... 25 0 20 0.30 6 5 0 1 0 0
........................................................................................................................GAAGAGGTAGTTATAGCTATTGACCC......................................................................................................... 26 0 20 0.30 6 6 0 0 0 0
........................................................................................................................GAAGAGGTAGTTATAGCTATTGACCCA........................................................................................................ 27 0 20 0.30 6 6 0 0 0 0
................................................................................................................CGTCACACGAAGAGGTAGTTATAG................................................................................................................... 24 0 20 0.25 5 5 0 0 0 0
......................................................CGTTATTGTAGCTTTCACGGTCGGT............................................................................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0
...................................................................TTCACGGTCGGTGAGTCGTTAGT................................................................................................................................................................. 23 0 20 0.25 5 1 4 0 0 0
.............................................................................GTGAGTCGTTAGTTGTCGTTGAAT...................................................................................................................................................... 24 0 20 0.25 5 5 0 0 0 0
....................................................................................................................ACACGAAGAGGTAGTTATAGCTATT.............................................................................................................. 25 0 20 0.25 5 5 0 0 0 0
.....................................................................CACGGTCGGTGAGTCGTTAGTTGT.............................................................................................................................................................. 24 0 20 0.25 5 0 5 0 0 0
...................................................................................CGTTAGTTGTCGTTGAATGGCACCT............................................................................................................................................... 25 0 20 0.25 5 4 1 0 0 0
.............................................................................................................................................GACCCAGTGGCTAACGTGGCT......................................................................................... 21 0 20 0.25 5 0 5 0 0 0
..................................................................................................................................................AGTGGCTAACGTGGCTGGTCGTGGC................................................................................ 25 0 20 0.20 4 4 0 0 0 0
........................................................................................................................................................................GGCAGTCGAGCAACTGTCGTT.............................................................. 21 0 20 0.20 4 3 0 1 0 0
...................................................................................................................................................GTGGCTAACGTGGCTGGTCGT................................................................................... 21 0 20 0.20 4 4 0 0 0 0
...................................................................................CGTTAGTTGTCGTTGAATGGCACC................................................................................................................................................ 24 0 20 0.20 4 4 0 0 0 0
.........................................................................................................................................................AACGTGGCTGGTCGTGGCAGT............................................................................. 21 0 20 0.20 4 4 0 0 0 0
.................................................GCATTCGTTATTGTAGCTTTCACGGT................................................................................................................................................................................ 26 0 5 0.20 1 0 1 0 0 0
...............................................................AGCTTTCACGGTCGGTGAGTCGTT.................................................................................................................................................................... 24 0 5 0.20 1 0 1 0 0 0
....................................................................................................................................ATAGCTATTGACCCAGTGGCTAACGT............................................................................................. 26 0 20 0.15 3 0 3 0 0 0
........................................................................................................................................................................GGCAGTCGAGCAACTGTCGTTGATGACG....................................................... 28 0 20 0.15 3 0 3 0 0 0
.............................GGCTGGGGTGACTTACGATTGCATT..................................................................................................................................................................................................... 25 0 20 0.15 3 1 2 0 0 0
.............................................................................................CGTTGAATGGCACCTCTCTCGTCACACGA................................................................................................................................. 29 0 20 0.15 3 0 3 0 0 0
..............................................................................................GTTGAATGGCACCTCTCTCGTCACAC................................................................................................................................... 26 0 20 0.15 3 0 3 0 0 0
................................................................................AGTCGTTAGTTGTCGTTGAATGGCACC................................................................................................................................................ 27 0 20 0.15 3 1 2 0 0 0
...........................................................................................................TCTCTCGTCACACGAAGAGGTAGT........................................................................................................................ 24 0 20 0.15 3 3 0 0 0 0
........................................................................GGTCGGTGAGTCGTTAGTTGTCG............................................................................................................................................................ 23 0 20 0.15 3 0 3 0 0 0
.................................................................................................................................................................................................ACGTTGCAGACGGCTTCATAACTGG................................. 25 0 20 0.15 3 0 0 3 0 0
........................................................................GGTCGGTGAGTCGTTAGTTGTCGT........................................................................................................................................................... 24 0 20 0.15 3 3 0 0 0 0
........................................................................................................................................................................GGCAGTCGAGCAACTGTCGT............................................................... 20 0 20 0.15 3 3 0 0 0 0
..................................................................TTTCACGGTCGGTGAGTCGTTAGT................................................................................................................................................................. 24 0 20 0.15 3 3 0 0 0 0
.............................................................................................CGTTGAATGGCACCTCTCTCGT........................................................................................................................................ 22 0 20 0.15 3 3 0 0 0 0
............................................................................GGTGAGTCGTTAGTTGTCGT........................................................................................................................................................... 20 0 20 0.15 3 3 0 0 0 0
..................................................................................................................................................................GGTCGTGGCAGTCGAGCAACTGTCGT............................................................... 26 0 20 0.15 3 3 0 0 0 0
.................................................................................................................................................................TGGTCGTGGCAGTCGAGCAACTG................................................................... 23 0 20 0.15 3 0 3 0 0 0
...........................................................................CGGTGAGTCGTTAGTTGTCGT........................................................................................................................................................... 21 0 20 0.15 3 0 3 0 0 0
..................................................................................................................................................AGTGGCTAACGTGGCTGGTCGT................................................................................... 22 0 20 0.15 3 3 0 0 0 0
...................................................................................................................................................................................AACTGTCGTTGATGACGTTGCAGAC............................................... 25 0 20 0.10 2 2 0 0 0 0
...............................................................................................................................................................GCTGGTCGTGGCAGTCGAGCAAC..................................................................... 23 0 20 0.10 2 0 2 0 0 0
...............................CTGGGGTGACTTACGATTGCATTCGT.................................................................................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0
......................................................................ACGGTCGGTGAGTCGTTAGTTGT.............................................................................................................................................................. 23 0 20 0.10 2 0 2 0 0 0
...........................GCGGCTGGGGTGACTTACGAT........................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0
....................................................................TCACGGTCGGTGAGTCGTTAGTTGTCGT........................................................................................................................................................... 28 0 20 0.10 2 0 2 0 0 0
......................................................................................................................................................................................................TCAGACGGCTTCATAACTGGACGGAGTT......................... 28 1 20 0.10 2 2 0 0 0 0
..........................................................................................................................AGAGGTAGTTATAGCTATTGA............................................................................................................ 21 0 20 0.10 2 0 2 0 0 0
..................................GGGTGACTTACGATTGCATTCGTTATT.............................................................................................................................................................................................. 27 0 20 0.10 2 0 2 0 0 0
............................................................................................TCGTTGAATGGCACCTCTCTCGTC....................................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0
..............................................................................................................................................................................................ATGACGTTGCAGACGGCTTCAT....................................... 22 0 20 0.10 2 0 2 0 0 0
.........................................................................GTCGGTGAGTCGTTAGTTGTC............................................................................................................................................................. 21 0 20 0.10 2 0 2 0 0 0
..................................................................................................................................................................GGTCGTGGCAGTCGAGCAACTGTC................................................................. 24 0 20 0.10 2 0 2 0 0 0
..................................GGGTGACTTACGATTGCATTCGT.................................................................................................................................................................................................. 23 0 20 0.10 2 0 2 0 0 0
..........................................................................................................................................ATTGACCCAGTGGCTAACGTGGCT......................................................................................... 24 0 20 0.10 2 0 2 0 0 0
................................................................................................................................................................CTGGTCGTGGCAGTCGAGCAACT.................................................................... 23 0 20 0.10 2 2 0 0 0 0
.............................................................................................................................................................................................GATGACGTTGCAGACGGCTTCAT....................................... 23 0 20 0.10 2 0 2 0 0 0
..............................GCTGGGGTGACTTACGATTGCATTCGT.................................................................................................................................................................................................. 27 0 20 0.10 2 2 0 0 0 0
................................................................................ATTCGTTAGTTGTCGTTGAATGGCAC................................................................................................................................................. 26 1 20 0.10 2 2 0 0 0 0
...................................................................................................................................................................................AACTGTCGTTGATGACGTTGCAGACG.............................................. 26 0 20 0.10 2 2 0 0 0 0
..........................................................................................................................................ATTGACCCAGTGGCTAACGTGGC.......................................................................................... 23 0 20 0.10 2 2 0 0 0 0
...................................................................................................................................................................GTCGTGGCAGTCGAGCAAC..................................................................... 19 0 20 0.10 2 2 0 0 0 0
.................................................................................................................................................................................GCAACTGTCGTTGATGACGTTGCAGAC............................................... 27 0 20 0.10 2 0 2 0 0 0
......TGCGCATGAAAAGCCACCACAGCGG............................................................................................................................................................................................................................ 25 0 20 0.10 2 0 2 0 0 0
..........................AGCGGCTGGGGTGACTTACGATTGC........................................................................................................................................................................................................ 25 0 20 0.10 2 0 2 0 0 0
..................................................................TTTCACGGTCGGTGAGTCGTTAGTTGT.............................................................................................................................................................. 27 0 20 0.10 2 2 0 0 0 0
..........................AGCGGCTGGGGTGACTTACGATTGCAT...................................................................................................................................................................................................... 27 0 20 0.10 2 0 2 0 0 0
.....................................................................................................................................................................................................TGCAGACGGCTTCATAACTGGACG.............................. 24 0 20 0.10 2 2 0 0 0 0
.............................................................................................................TCTCGTCACACGAAGAGGTAGTT....................................................................................................................... 23 0 20 0.10 2 0 2 0 0 0
.................................GGGGTGACTTACGATTGCATTCG................................................................................................................................................................................................... 23 0 20 0.10 2 0 2 0 0 0
...............................................................................................................TCGTCACACGAAGAGGTAGTTATAGC.................................................................................................................. 26 0 20 0.10 2 0 2 0 0 0
......................................................................................................................................................................GTGGCAGTCGAGCAACTGT.................................................................. 19 0 20 0.10 2 2 0 0 0 0
............................................................................................................................................TGACCCAGTGGCTAACGTGGCTGGTCGT................................................................................... 28 0 20 0.10 2 0 2 0 0 0
............................CGGCTGGGGTGACTTACGAT........................................................................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0
.................................................................................GTCGTTAGTTGTCGTTGAATG..................................................................................................................................................... 21 0 20 0.10 2 0 2 0 0 0
...TGTTGCGCATGAAAAGCCACCACAG............................................................................................................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0
........................ACAGCGGCTGGGGTGACTTACGAT........................................................................................................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0
............................................CGATTGCATTCGTTATTGT............................................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................GACCCAGTGGCTAGCGTGGCTGGTCGT................................................................................... 27 1 20 0.05 1 1 0 0 0 0
.....................................................................GACGGTCGGTGAGTCGTTAGTTGT.............................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0
............................CGGCTGGGGTGACTTACG............................................................................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................GGCGGGTCGTGGCAGTCGAGCAACT.................................................................... 25 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................GCTAGCGTGGCTGGTCGTGGCAGT............................................................................. 24 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................ACAGTGGCTAACGTGGCTGGTCGT................................................................................... 24 1 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................CGTTGCAGACGGCTTCATA...................................... 19 0 20 0.05 1 0 1 0 0 0
......TGCGCATGAAAAGCCGCCACAGCGGCT.......................................................................................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
......TGCGCATGAAAAGCCACCACAGCGGC........................................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0
.......................CACAGCGGCTGGGGTGACTT................................................................................................................................................................................................................ 20 0 20 0.05 1 0 1 0 0 0
.................................................................................................GAATGGCACCTCTCTCGTCACAC................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
............................................................................GGTGAGTCGTTAGTTGTCGTTGAA....................................................................................................................................................... 24 0 20 0.05 1 0 0 1 0 0
............................................................................................................CCCTCGTCACACGAAGAGGTAGTTAT..................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
...TGTTGCGCATGAAAAGCCACCACAGC.............................................................................................................................................................................................................................. 26 0 20 0.05 1 0 0 1 0 0
...................................................................................CGTTAGTTGTCGTTGAATGGC................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................CCCAGTGGCTAACGTGGCTTGTCGT................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................GATATTGACCCAGTGGCTAACGTGGCT......................................................................................... 27 1 20 0.05 1 1 0 0 0 0
...................................................................................................................CACACGAAGAGGTAGTTATAGCT................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................ACGGCTTCATAACTGGACGG............................. 20 0 20 0.05 1 1 0 0 0 0
..................................GGGTGACTTACGATTGCAT...................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
.....................................................................................TTAGTTGTCGTTGAATGGCACCTCT............................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
..........................................................................................................CTCTCTCGTCACACGAAGAGGCAGT........................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................TCAACTGTCGTTGATGACGTTGCAG................................................. 25 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................CCAGTGGCTAACGTGGCTGGTCG.................................................................................... 23 0 20 0.05 1 0 1 0 0 0
...............................................................................GAGTCGTTAGTTGTCGTTGAATGGC................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
..........................................................................TCGGTGAGTCGTTAGTTGTCGTT.......................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
.......................................................................................................................................................................................................................TGGACGGAGTTCGGCAGTT................. 19 0 20 0.05 1 1 0 0 0 0
........................................................................................GTTGTCGTTGAATGGCACCTCTCT........................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.......................GTCAGCGGCTGGGGTGACTTACGAT........................................................................................................................................................................................................... 25 2 20 0.05 1 1 0 0 0 0
...................................................................TTCACGGTCGGTGAGTCGTTAGTTGT.............................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................AGCTATTGACCCAGTGGCTAACGGG............................................................................................ 25 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................................ATGGTCGTGGCAGTCGAGCAACTGT.................................................................. 25 1 20 0.05 1 1 0 0 0 0
...........................................ACGATTGCATTCGTTATTGT............................................................................................................................................................................................ 20 0 20 0.05 1 0 1 0 0 0
.......................................................................CGGTCGGTGAGTCGTTAG.................................................................................................................................................................. 18 0 20 0.05 1 0 1 0 0 0
.............................................................................TTGAGTCGTTAGTTGTCGTTGAATGG.................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
...................................................................................................................CACACGAAGAGGTAGTTAT..................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0
.....................................................................................TTAGTTGTCGTTGAATGGCACCTCTCT........................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
.................................................................................................................GTCACACGAAGAGGTAGTTATAGCTATT.............................................................................................................. 28 0 20 0.05 1 0 1 0 0 0
..............................................................................................................CTCGTCACACGAAGAGGTAGTTATAGCC................................................................................................................. 28 1 20 0.05 1 0 1 0 0 0
..............................................ATTGCACTGGGTATTGTAG.......................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0
.......................................................................CGGTCGGTGAGTCGTTAGTT................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................ACGGCTTCATAACTGGACGGA............................ 21 0 20 0.05 1 0 1 0 0 0
......................................................................................TAGTTGTCGTTGAATGGCACCTCTCTCGT........................................................................................................................................ 29 0 20 0.05 1 0 1 0 0 0
..................................................................GATCACGGTCGGTGAGTCGTTAGTTGT.............................................................................................................................................................. 27 2 20 0.05 1 1 0 0 0 0
......................CCACAGCGGCTGGGGTGACTTACGG............................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................GCATTCGAGCAACTGTCGTT.............................................................. 20 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................GCAGACGGCTTCATAACTGG................................. 20 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................AGTCGAGCAACTGTCGTTGAT........................................................... 21 0 20 0.05 1 1 0 0 0 0
...................................GGTGACTTACGATTGCATTCGTTATTT............................................................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0
..........................................................................TCGGTGAGTCGTTAGTTGTCGTTGAA....................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................................AGTCGAGCAGCTGTCGTTGATGACGT...................................................... 26 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................GGCTGGTCGTGGCAGTCGA.......................................................................... 19 0 20 0.05 1 1 0 0 0 0
..............................GCTGGGGTGACTTACGATTGCAT...................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
........................................................................................GTTGTCGTTGAATGGCACCTC.............................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0
....................................................................................................................ACACGAAGAGGTAGTTATAGCTATTGA............................................................................................................ 27 0 20 0.05 1 0 1 0 0 0
.............................................................................................CGTTGAATGGCACCTCTCTCGTCA...................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
............................................................................CGTGAGTCGTTAGTTGTCGTTGAAT...................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................GGCAGTCGAGCAACTGTCGTTGA............................................................ 23 0 20 0.05 1 1 0 0 0 0
............................................................................................................................AGGTAGTTATAGCTATTGACCCAGT...................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
.......................................................................................................................................GCTATTGACCCAGTGGCTAACGCGGCT......................................................................................... 27 1 20 0.05 1 1 0 0 0 0
..........................................TACGATTGCATTCGTTATTG............................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................CTATTGACCCAGTGGCTAACGTGGC.......................................................................................... 25 0 20 0.05 1 0 1 0 0 0
CGTTGTTGCGCATGAAAAG........................................................................................................................................................................................................................................ 19 0 20 0.05 1 0 0 1 0 0
......................................................................................TAGTTGTCGTTGAATGGCACCTCTCT........................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................TGCTAACGTGGCTGGTCTTGGCAGT............................................................................. 25 2 20 0.05 1 1 0 0 0 0
..................................................................................TCGTTAGTTGTCGTTGAATGGCACCTCT............................................................................................................................................. 28 0 20 0.05 1 0 1 0 0 0
................................................................................................................................................CCAGTGGCTAACGTGGCTGGT...................................................................................... 21 0 20 0.05 1 0 0 0 1 0
..........................................................................................................................................................ACGTGGCTGGTCGTGGCAGTC............................................................................ 21 0 20 0.05 1 1 0 0 0 0
.....................................................................CACGGTCGGTGAGTCGTTAG.................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0
...........................TCGGCTGGGGTGACTTACGA............................................................................................................................................................................................................ 20 1 20 0.05 1 0 0 1 0 0
................................................................TCTTTCACGGTCGGTGAGTCGTTAGT................................................................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0
.............................GGCTGGGGTGACTTACGAT........................................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0
.......................................................................CGGTCGGTGAGTCGTTAGTTG............................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1
.........................................................................................................................................................................................................GACGGCTTCATAACTGGACGGAG........................... 23 0 20 0.05 1 0 1 0 0 0
................................................................................................................................AGTTATAGCTATTGACCCAGT...................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................................................TTCATAACTGGACGGAGTTCGGCAG................... 25 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................TAGCTATTGACCCAGTGGCTAAC............................................................................................... 23 0 20 0.05 1 0 1 0 0 0
.................................................................................................................................................................................GCAACTGTCGTTGATGACGTT..................................................... 21 0 20 0.05 1 0 1 0 0 0
...................................................................TTCACGGTCGGTGAGTCGTTAGTT................................................................................................................................................................ 24 0 20 0.05 1 0 1 0 0 0
..........................AGCGGCTGGGGTGACTTACGATTGCA....................................................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................TGCAGACGGCTTCATAACT................................... 19 0 20 0.05 1 1 0 0 0 0
..................................................................................TCGTTAGTTGTCGTTGAATGGCAC................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................AGCTATTGACCCAGTGGCTAAC............................................................................................... 22 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................GTGGCTAACGTGGCTGGTCGTGG................................................................................. 23 0 20 0.05 1 0 1 0 0 0
...........................................................................................................TCTCTCGTCACACGAAGAGGTAG......................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
.................AGCCACCACAGCGGCTGGGGTGACTT................................................................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................ACCCAGTGGCTAACGTGGCT......................................................................................... 20 0 20 0.05 1 1 0 0 0 0
...................................................................ATCACGGTCGGTGAGTCGTTAGTTGT.............................................................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0
.........................................................................................................................................TATTGACCCAGTGGCTAACGT............................................................................................. 21 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................TGGCAGTCGAGCAACTGTC................................................................. 19 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................GCTGGTCGTGGCAGTCGAGCAA...................................................................... 22 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................TCGTGGCAGTCGAGCAACTGTCGTTGAT........................................................... 28 0 20 0.05 1 0 1 0 0 0
...................CCACCACAGCGGCTGGGGTGACTT................................................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0
...............................CTGGGGTGACTTACGATTG......................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................ATGACGTTGCAGACGGCTTCATAA..................................... 24 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................................GACGGCTTCATAACTGGACGGAGTT......................... 25 0 20 0.05 1 1 0 0 0 0
........................................................................................................................GAAGAGGTAGTTATAGCTATT.............................................................................................................. 21 0 20 0.05 1 0 0 1 0 0
....................AACCACAGCGGCTGGGGTGACTTACGAT........................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
........................................CTTACGATTGCATTCGTTATTGT............................................................................................................................................................................................ 23 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................GGCTGGTCGTGGCAGTCGAGCAACTG................................................................... 26 0 20 0.05 1 0 1 0 0 0
...................................................................................CGTTAGTTGTCGTTGAATGGCACCTCT............................................................................................................................................. 27 0 20 0.05 1 0 0 1 0 0
...................................................................TTCACGGTCGGTGAGTCGTTAG.................................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0
................................CGGGGTGACTTACGATTGCATTCGT.................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................GTTGCTGACGTTGCAGACGGCTTCAT....................................... 26 1 20 0.05 1 0 1 0 0 0
..................................................................................................................TCACACGAAGAGGTAGTTATAGC.................................................................................................................. 23 0 20 0.05 1 0 0 1 0 0
.GTTGTTGCGCATGAAAAGC....................................................................................................................................................................................................................................... 19 0 20 0.05 1 0 0 1 0 0
.................................................................CTTTCACGGTCGGTGAGTCGTTAGTT................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................GGCTAACGTGGCTGGTCATGGCAG.............................................................................. 24 1 20 0.05 1 0 1 0 0 0
......................CCACAGCGGCTGGGGTGACTTACGATT.......................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
.............................GGCTGGGGTGACTTACGATTGCATTCGT.................................................................................................................................................................................................. 28 0 20 0.05 1 0 1 0 0 0
.......................................................................CGGTCGGTGAGTCGTTAGTTGT.............................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0
.............................................................................GTGAGTCGTTAGTTGTCGT........................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
...........................GCGGCTGGGGTGACTTACGATTGCAT...................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
....................................................................................GTTAGTTGTCGTTGAATGGCACC................................................................................................................................................ 23 0 20 0.05 1 0 1 0 0 0
........................ACAGCGGCTGGGGTGACTTACGA............................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................CTGCAGACGGCTTCATAACTGGACGGAGT.......................... 29 1 20 0.05 1 0 1 0 0 0
.............................GGCTGGGGTGACTTACGATTGCATA..................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................GTCGAGCAACTGTCGTTGATGACGC...................................................... 25 1 20 0.05 1 1 0 0 0 0
.........................................................................GTCGGTGAGTCGTTAGTTGTCGTTGAA....................................................................................................................................................... 27 0 20 0.05 1 0 0 1 0 0
....GTTGCGCATGAAAAGCCACCACAGCGGCT.......................................................................................................................................................................................................................... 29 0 20 0.05 1 0 1 0 0 0
....................................................................................................TGGCACCTCTCTCGTCACAC................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0
CGTTGTTGCGCATGAAAAGCCACC................................................................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
........................................................................................................................GAAGAGGTAGTTATAGCTATTG............................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
........................................................................GGTCGGTGAGTCGTTAGTTGTCGTTG......................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0
...............................................................................................TTGAATGGCACCTCTCTCGTCACACGA................................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................AGAGGTAGTTATAGCTATTGACCCA........................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
.....................................................................TACGGTCGGTGAGTCGTTAGTTGT.............................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0
...........................................................................................................................................TTGACCCAGTGGCTAACGTGGC.......................................................................................... 22 0 20 0.05 1 0 1 0 0 0
........................................................................................................................................................TAACGTGGCTGGTCGTGGCAGTCGA.......................................................................... 25 0 20 0.05 1 1 0 0 0 0
...................CCACCACAGCGGCTGGGGTGACTTACGA............................................................................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0
......................................................................ACGGTCGGTGCGTCGTTAGTTG............................................................................................................................................................... 22 1 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004956:461661-461911 - dwi_3803 GCAACAACGCGTACTTTTCGGTGGT---GTCGCCGACCCCACTGAATGCTAACGTAAGCAAT--------------AACATCGAAAGTGCCAGCCACTCAGCAATCAACAGCAA-CTTACCG-----------TGGAGAGAGC-----AG-----------------------------------TGTGC-----TTCTCC---ATCAATATCGATA------ACTGGG------TCACCGATTG------------------------------------------------------------------------------C---ACCGACCAGCACCGTCAG---CTC-------GTTG------ACAGCAA---------CTACTGCAACGTCTGCCGAAGTATTGAC---CTGCCTCAAGCCGTCAAGGACAAGTCGC-------------------------------------CCAGAG
droMoj3 scaffold_4627:4464-4511 + TGGAAGAGGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTCCATCAGAGCGGACAACTTAGTCAACG----------------------------------------------------
droAna3 scaffold_13034:1038520-1038797 + GAAACAACGCGTACTTCTCTTTTAAAGCGACCGAAAACCA------TGCA---------------------AGCTCTGATCAAGCGCGGTCAATTACCCCCAAATTGACCGAAT-TCTTAAA-----------CGTAGAGAGCGAGAGAG-----------------------------------CGCGTTCCTGCTCCCCCTCGATACCATCGATG------TCTCTGCAG---CCAAAGAGTG------------------------------------------------------------------------------C---ACTAACTAGCACCTCAAT---TTC-------TTTG------ACAACGTCAACAGTAACAACAACAACAACCGCAACTGTATCGACAGCGCGTTTAACGACGTCATCAGCTAGCAGCGCAAATAGTAATACG----------------------------
droBip1 scf7180000393312:16017-16291 - GAAACAACGTTTACTTCACTTTCAGAGCAACTGAAAGTAA------TGCA---------------------AGCTCGTCCCAAAAACGGCCAATTACCCCGAAATTGACCGAAT-TCGTAAA-----------CGTAGAGAGCGAGAGAG-----------------------------------CGCGTTCTTGCTCCCCCTTAATACCATCGATG------TCTCTGCAG---CCAAAGATCA------------------------------------------------------------------------------C---AGTAACTAGCACCGCAAC---TTC-------TTTG------ACAACGTCAACCG---CAACAACAACAACCGCAACTGTAACGACAGCGCGTTTAACGAAGTCATCAGCTAGCAGCGCAAAAATTAATACT----------------------------
droKik1 scf7180000300971:27658-27789 + CCACCAACTTCGATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA---------------------------------------------------------------------------------------------GACGCACCAACAACAATCAGTACTGCAAT---TTC-------TGCA------AACGCAGCAAAAG---------CAACAGCAACAGCTAAATTAACGACCAATATTGCGAAATCGGTGCCAACGGCCGCAG------------------------------C-GCCAAAT
droFic1 scf7180000453788:2761-3038 + GAAACAACGCTTACTTTACTTTCAAAGCAACCGAAAGTAA------TGCA---------------------AGCTCAACACAAACACGGTCAATTACCCCAAACTTGACCGAAT-TCTTAAA-----------CGTAGAGAGCGAAAGAG-----------------------------------CGCGATCTTGCTCCCCATCGCTACCATCGATG------TCTCTGCAG---CCAAAGAGCG------------------------------------------------------------------------------C---AGTAACTAGCACCGCAAT---TTC-------TTTG------ACAACGTCAACCGTAACAACAACAACAACCGCAACTGTAACGACAGCGCGTTTAACGACGTCATCAGTTAGCAGCGCAGACATTAATACT----------------------------
droEle1 scf7180000490140:13814-14035 + AAAATAATGCATACTTAGCAATTGT---CTCATCGGAGAC------AGTA---------------------AATAAA--------------------A----------------------------------------------------CAACAACAATGTCGCCACCCGCTACTGAGAGAGCT--CGGTCTCTTTCGCCAGCACTATTTA--CCAACTTAAGCTGCGCTGCTCC-----AGCGCAGTCATGGAGTTGGCAATACTCTTCCCCCCTTCCACCTATAGACGCACCGACTACATCAGCTTGTG-----------C---GGTCACTAATACGGTGCC---------------------------------------------------------------------------------------------------------------CT----------------------------
droRho1 scf7180000762347:763-1069 + GGAACAATGCTTACATTTCAATTGA---CTCATCGGAGGC------AACA---------------------A------------------------------------------------------------------------------CAAAATTAACGTCACTGACCGCTACCGAAAGTGCC--CGCTCACTGTCACCAGCGATTTTATGCTC-----AAGCAGCGCTGCCGT-----TACTTAGTCGTGGAGTTCACAATGCCCGTCACCTCTCTCTCTCATCGATGCACCGACTACTTCGGCTTGTG-----------C---GCCCACCAGCACTGTACC---CTC-------TCTT------ACTACAGCAACGTCAACGACAACAACAACTTTAACGTCTGCGGCTACCCAGTGGCCTATCTCAAC-------ACCACA---AGTAAAACTT------------------T-GCTCTAC
droBia1 scf7180000301424:25370-25617 + GAAACAACGCATACTTTTCTTTTAAAGCAACTAAAAAT-A------TTTA---------------------AGCTTTGATTAAGCGCAGTCAATTACCTCCGACTTGACCAAAA-TTTTAAA-----------AGAAGATTACAAGAAAG-----------------------------------CGCGTTCTTGCTCCCCCCAGCTACCATTGATA------TCTCTGCAG---CCAA--AGCG------------------------------------------------------------------------------C---ATTAACTAGTATCGCAAT---TTC-------TTTG------ACAACGTCAACCGTAACAACAACAATAACCGCAACTGTATTGACAGCGCGTTGAACGACATGA-------------------------------------------------------
droTak1 scf7180000413396:4933-5225 - GAAACAACGCTTACCTTTGTATACGAGC--TGATGAGTCAATAGTACG--AAAGAAAACTACAACATTGCAAG-----------------------------------------------------TGAACAC---------AGCGAGAG-----------------------------------CGCGCTCGCTCTTCCCTGCATTACTATGTGC-----AAGCGGCACAGCACC-----CAATGAGCCGTGGAGTGCCCAATGCCCGTCCCCC--------------------GACCTCTACGACCTTACAAGCAATATAAC---AACAACTACCAGCACAATGCCCGT-------ATTTACCACTGTGACTTCGACACTAACAACAATAACCAACACAACAACAACTACATCT------------------ACTGCAGTCA---------------------------------C-TCAGCGC
droEug1 scf7180000407927:1848-2108 - GAAACAACGATTACTTCTCTTTCAAAGCAACCGAAAGTAA------TGCA---------------------AGC-----------ACTGTCAATTACCCCCAACTAGACCGAAT-TCTTAAA-----------CGTAGAGAGCGAGAGAG-----------------------------------CGCTATC------CCCCTCGCTACCATCGATG------TCTCTGCAG---CCAAGGAGCG------------------------------------------------------------------------------C---AGCAACTAGCACCGCAAT---TTC-------TTTG------ACAACGTCAACCCTAACAACAACAACAACCGCAACTGTAACGACAGCGTGTTTAACGACGTCATCAGCTAGCAGCGCAAACAATAATACT----------------------------
dm3 chr3RHet:1959700-1959935 - GTAACAACGCGTACTTTTCTTATGT---CTTCGCGACACT------TGCA---------------------AACGCAGACAACGAGCGGCCAATAACCCAAAACCCAACGAACCTTCTTGTACCAACAAATCATGAAGAGAGCA--AGAG---------------------------------------------CTCTCCCGCACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GCCCCGC-------------------T---------------------------------ATCT---GTAACAACAACAACTGGAGCAATACCGACAGCCCGCTCTACTTCGCCGTTGGCTGCACCCGCTCACGCTCTTACTG-------------------------AG
droSim2 node_1389:6053-6315 - GTAACAACGCCTGCTTTTCTTATGT---CTCCGCGACAAC------TGAA---------------------AACGCAGGCAACGAGCGGACAATAACGCATAACCCAACGAACCTTCTTGTACCAAAAAGTCA---------AGAAAGAG-----------------------------------CGCGCTCTTACTCTCCCGCACTTCTAGGTCCAAAACAA---------------------------------------------------------------------------------------------GACCCGC-------------------T---------------------------------ATCT---GTAACAACAACAACTGGAGCAATACCGACAGCCCGCTCTACTTCGCCGTTGGCTGCACCCGTTCACGCTCTTACTGAGTCAGCGAAAACAAAAGC-GCAAGAG
droSec2 scaffold_116:71986-72247 - GCAACAACGCGTACTTCACCTACGT---CTCACCGACAAC------CCCA---------------------AACGCAGACATCGAGCGGTCGATAATCCATAGCCAAAGAAACCTTCTTCTACCAACAAATCA-----------AGAAAG-----------------------------------AGCGCTCCTGCTCTCCCGCTCTCTTAGCTCCGACAGAA---------------------------------------------------------------------------------------------GCCCCGC-------------------T---------------------------------ACCT---CCAACAACAACAGCTGGAGATAGACCGACAGCCCGCTCTACCTCGTCATCGGCTGCACGCGCTCACGCTCTGACTGAGTCAGCGAAAGCAAAACCGCAAGCAA
droYak3 v2_chrX_random_046:230829-231101 - GAAACAACGCGTACTTCCTATACGT---CTCCGCGACTTC------TGC---------------------------AGACAGCGAGCGGTCAATCACCCCTAACCCGACGAATTTACTTTTGCCAACAACTCA---------AGAAAGAG-----------------------------------CGCGTTCTTGCTCTCCCTCATTACTAGCTTCGTCACAA---------------------------------------------------------------------------------------------AACCCGCAAGCACCAAACACTTGCGAAAT---TTCTTTACGCTACG------GTGACTACAACTGCAATCAGAACAACAGCTGGAACGGTATCATCGGCTCGCTCAATTTCGTCGACGCAAGTACTTGCTCGCCC-------------------------------TGAG
droEre2 scaffold_4929:21680910-21681108 - GAAACAACGCTCACTTTTCTAACGC---CTCCGCGACAGC------TGCC---------------------AACGCAGACAATGAGCAGTCAATAACCCATAGCCCAACGAACCTTTTTTTGTCAACAAATCA---------AGAAAGAG-----------------------------------TGCGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT---CCAACAACAACAGCTGGAGCAATATCGACAGCCCGCTGAATTTCGTCGTCGACCGCATCCGCTCACGCTCTCACTG-------------------------AG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GCAACAACGCGTACTTTTCGGTGGT---GTCGCCGACCCCACTGAATGCTAACGTAAGCAAT--------------AACATCGAAAGTGCCAGCCACTCAGCAATCAACAGCAA-CTTACCG-----------TGGAGAGAGC-----AG-----------------------------------TGTGC-----TTCTCC---ATCAATATCGATA------ACTGGG------TCACCGATTG------------------------------------------------------------------------------C---ACCGACCAGCACCGTCAG---CTC-------GTTG------ACAGCAA---------CTACTGCAACGTCTGCCGAAGTATTGAC---CTGCCTCAAGCCGTCAAGGACAAGTCGC-------------------------------------CCAGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCCGTCAAGGACAAGTCGC-------------------------------------CCAGA.2720.50101000
............................................................................................................................................................................................................ATCAATATCGATA------ACTGGG------TC.........................................................................................................................................................................................................................................................21200.30606000
........................................................AGCAAT--------------AACATCGAAAGTGCCAGC........................................................................................................................................................................................................................................................................................................................................................................................................2450.20101000
.............................................................................................................................................................................................................................................ACCGATTG------------------------------------------------------------------------------C---ACCGACCAGCACCGTC...............................................................................................................................................25200.15303000
......................................................................................................................................................................................................TCC---ATCAATATCGATA------ACTGGG------TCA........................................................................................................................................................................................................................................................25200.15303000
....................................................................................................................................................................................................TCTCC---ATCAATATCGATA------ACTGGG------...........................................................................................................................................................................................................................................................24200.15303000
................................................................................................................................................................................................................................................................................................................................................................................ACAGCAA---------CTACTGCAACGTCTGCCGAAG.................................................................................28200.15303000
....................................................................................................................TTACCG-----------TGGAGAGAGC-----AG-----------------------------------TGTGC-----TTC................................................................................................................................................................................................................................................................................................26200.10202000
.......................................................................................................ATCAACAGCAA-CTTACCG-----------TGGAGAGAG........................................................................................................................................................................................................................................................................................................................................................27200.10200020
...........................................................................................................................................................................................................................................TCACCGATTG------------------------------------------------------------------------------C---ACCGACCAGCACCGT................................................................................................................................................26200.10202000
...............................................................................................................CAA-CTTACCG-----------TGGAGAGAGC-----A.................................................................................................................................................................................................................................................................................................................................................21200.10202000
...................................................................................................................CTTACCG-----------TGGAGAGAGC-----AG-----------------------------------TGTG.........................................................................................................................................................................................................................................................................................................23200.10202000
..............................................................................................................................................................................................................................................CCGATTG------------------------------------------------------------------------------C---ACCGACCAGCAC...................................................................................................................................................20200.10202000
........................................................................................................TCAACAGCAA-CTTACCG-----------TGGAGAGA.........................................................................................................................................................................................................................................................................................................................................................25200.10202000
................................................................................................................................................................................................................................................................................................................................................................................ACAGCAA---------CTACTGCAACGTCT........................................................................................21200.10202000
...ACAACGCGTACTTTTCGGTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................CGTCTGCCGAAGTATTGAC---CTGCCTCAA..............................................................28200.05101000
...........................................................................................................................................................................................TGC-----TTCTCC---ATCAATATCGATA------A......................................................................................................................................................................................................................................................................23200.05101000
...............................................................................................................CAA-CTTACCG-----------TGGAGAGAGC-----AG-----------------------------------.............................................................................................................................................................................................................................................................................................................22200.05101000
..............................CGCCGACCCCACTGAATGCTAACGTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.............................................................................................................................................................................................................................................ACCGATTG------------------------------------------------------------------------------C---ACCGACCAGCA....................................................................................................................................................20200.05101000
............................................................................................................................................................................................................ATCAATATCGATA------ACTGGG------T..........................................................................................................................................................................................................................................................20200.05101000
.......................................................................................................ATCAACAGCAA-CTTACCG-----------TGGAGAGA.........................................................................................................................................................................................................................................................................................................................................................26200.05100100
.......................GT---GTCGCCGACCCCACTGAATGCTAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.......................................................................................TGCCAGCCACTCAGCAATCAACAGCAA-C..................................................................................................................................................................................................................................................................................................................................................................................28200.05100010
......................................................................................................................................................................................................................ATA------ACTGGG------TCACCGATTG------------------------------------------------------------------------------C---A..............................................................................................................................................................21200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................GCAACGTCTGCCGAAGTATTG............................................................................21200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................CAGCAA---------CTACTGCAACGTCTGCCGAAGT................................................................................28200.05101000
.....................TGGT---GTCGCCGACCCCACTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
....................................................................................................................TTACCG-----------TGGAGAGAGC-----AG-----------------------------------TGTGC-----TTCT...............................................................................................................................................................................................................................................................................................27200.05100100
......................................................................................................AATCAACAGCAA-CTTACCG-----------TGGAGA...........................................................................................................................................................................................................................................................................................................................................................25200.05101000
........................T---GTCGCCGACCCCACTGAATGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
..........................................................................................................AACAGCAA-CTTACCG-----------TGGAGA...........................................................................................................................................................................................................................................................................................................................................................21200.05101000
droMoj3
TGGAAGAGGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTCCATCAGAGCGGACAACTTAGTCAACG----------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droAna3
GAAACAACGCGTACTTCTCTTTTAAAGCGACCGAAAACCA------TGCA---------------------AGCTCTGATCAAGCGCGGTCAATTACCCCCAAATTGACCGAAT-TCTTAAA-----------CGTAGAGAGCGAGAGAG-----------------------------------CGCGTTCCTGCTCCCCCTCGATACCATCGATG------TCTCTGCAG---CCAAAGAGTG------------------------------------------------------------------------------C---ACTAACTAGCACCTCAAT---TTC-------TTTG------ACAACGTCAACAGTAACAACAACAACAACCGCAACTGTATCGACAGCGCGTTTAACGACGTCATCAGCTAGCAGCGCAAATAGTAATACG----------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................TTTAAAGCGACCGAAAACCA------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................AAA-----------CGTAGAGAGCGAGAGAG-----------------------------------C............................................................................................................................................................................................................................................................................................................21200.255500000
.............................................................................................................................................................................................TTCCTGCTCCCCCTCGATACCATCGATG------.......................................................................................................................................................................................................................................................................28200.255050000
...................................................................................................................................................................................................................TCGATG------TCTCTGCAG---CCAAAG.....................................................................................................................................................................................................................................................21200.153300000
...........................................................................................................................................................................................................................................................................................................................................................................................AGTAACAACAACAACAACCGCAACTG.................................................................................26200.153030000
...........................................................................................................................................................................................CGTTCCTGCTCCCCCTCGATA......................................................................................................................................................................................................................................................................................21200.102200000
.....................................................................................................................................CGTAGAGAGCGAGAGAG-----------------------------------CGCG.........................................................................................................................................................................................................................................................................................................21200.102200000
...................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACCGCAACTGTAT..............................................................................21200.102200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGTCATCAGCTAGCAGCG..........................................21200.102200000
.............................................................................................................................................................................................................................................................................................................................................................................................TAACAACAACAACAACCGCAACTGT................................................................................25200.102020000
......................................................................................................................................GTAGAGAGCGAGAGAG-----------------------------------CGCGT........................................................................................................................................................................................................................................................................................................21200.102200000
............................................................................................ATTACCCCCAAATTGACCGAAT-TCTT...............................................................................................................................................................................................................................................................................................................................................................................26200.051010000
...............................................................................................................................................................................................................................................................................................................................................GCACCTCAAT---TTC-------TTTG------ACAACGTC..............................................................................................................25200.051010000
..................................................................................................................................................................................................................................................................................................................................................CCTCAAT---TTC-------TTTG------ACAACGTCAACAG.........................................................................................................27200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGCGTTTAACGACGTC........................................................19200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGACGTCATCAGCTAGCAGCG..........................................26200.051000010
.........................................................................................................................A-----------CGTAGAGAGCGAGAGAG-----------------------------------CGCT.........................................................................................................................................................................................................................................................................................................22200.051100000
.....................................................................................................................................................G-----------------------------------CGCGTTCCTGCTCCCCCTCGATACCA...................................................................................................................................................................................................................................................................................27200.051100000
.......................................................................................................................................................................................................................TG------TCTCTGCAG---CCAAAGAGTG------------------------------------------------------------------------------...................................................................................................................................................................21200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCTAGCAGCGCAAATAGTAATACG----------------------------27200.051010000
.......................................................................................................................................................................................................................TG------TCTCTGCAG---CCAAAGAGTG------------------------------------------------------------------------------C---...............................................................................................................................................................22200.051001000
............................................................................................................................................AGCGAGAGAG-----------------------------------CGCGTTCCTGC..................................................................................................................................................................................................................................................................................................21200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................AACAACCGCAACTGTATCGACAGCGCG....................................................................27200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCGACAGCGCGTTTAACGACGTCA.......................................................24200.051000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACGTCATCAGCTAGCAGCGC.........................................24200.051010000
GAAACAACGCGTACTTCTCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
..................................AAACCA------TGCA---------------------AGCTCTGATCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGACGTCATCAGCTAGCAG............................................22200.051100000
....................................................................................................................................................................................................TCCCCCTCGATACCATCGATG------TCTCTG.................................................................................................................................................................................................................................................................27200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCATCAGCTAGCAGCGCAAATAG...................................27200.051100000
.....................................................................................................................................................................................................................................................................................................................................................CAAT---TTC-------TTTG------ACAACGTCAACAGT........................................................................................................25200.051010000
........................................................................................................................AA-----------CGTAGAGAGCGAGAGAG-----------------------------------CGC..........................................................................................................................................................................................................................................................................................................22200.051010000
.....................................................................................................................TTAAA-----------CGTAGAGAGCGAGAGAG-----------------------------------C............................................................................................................................................................................................................................................................................................................23200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACCGCAACT..................................................................................19200.051100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCATCAGCTAGCAGC...........................................18200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGACGTCATCAGCTAGC..............................................21200.051100000
..................................................................................................................................................................................................................ATCGATG------TCTCTGCAG---CCAAAGAG...................................................................................................................................................................................................................................................24200.051100000
droBip1
GAAACAACGTTTACTTCACTTTCAGAGCAACTGAAAGTAA------TGCA---------------------AGCTCGTCCCAAAAACGGCCAATTACCCCGAAATTGACCGAAT-TCGTAAA-----------CGTAGAGAGCGAGAGAG-----------------------------------CGCGTTCTTGCTCCCCCTTAATACCATCGATG------TCTCTGCAG---CCAAAGATCA------------------------------------------------------------------------------C---AGTAACTAGCACCGCAAC---TTC-------TTTG------ACAACGTCAACCG---CAACAACAACAACCGCAACTGTAACGACAGCGCGTTTAACGAAGTCATCAGCTAGCAGCGCAAAAATTAATACT----------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCACCAACTTCGATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA---------------------------------------------------------------------------------------------GACGCACCAACAACAATCAGTACTGCAAT---TTC-------TGCA------AACGCAGCAAAAG---------CAACAGCAACAGCTAAATTAACGACCAATATTGCGAAATCGGTGCCAACGGCCGCAG------------------------------C-GCCAAATSizeHit CountTotal NormTotal
No Reads
droFic1
GAAACAACGCTTACTTTACTTTCAAAGCAACCGAAAGTAA------TGCA---------------------AGCTCAACACAAACACGGTCAATTACCCCAAACTTGACCGAAT-TCTTAAA-----------CGTAGAGAGCGAAAGAG-----------------------------------CGCGATCTTGCTCCCCATCGCTACCATCGATG------TCTCTGCAG---CCAAAGAGCG------------------------------------------------------------------------------C---AGTAACTAGCACCGCAAT---TTC-------TTTG------ACAACGTCAACCGTAACAACAACAACAACCGCAACTGTAACGACAGCGCGTTTAACGACGTCATCAGTTAGCAGCGCAGACATTAATACT----------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAAATAATGCATACTTAGCAATTGT---CTCATCGGAGAC------AGTA---------------------AATAAA--------------------A----------------------------------------------------CAACAACAATGTCGCCACCCGCTACTGAGAGAGCT--CGGTCTCTTTCGCCAGCACTATTTA--CCAACTTAAGCTGCGCTGCTCC-----AGCGCAGTCATGGAGTTGGCAATACTCTTCCCCCCTTCCACCTATAGACGCACCGACTACATCAGCTTGTG-----------C---GGTCACTAATACGGTGCC---------------------------------------------------------------------------------------------------------------CT----------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGAACAATGCTTACATTTCAATTGA---CTCATCGGAGGC------AACA---------------------A------------------------------------------------------------------------------CAAAATTAACGTCACTGACCGCTACCGAAAGTGCC--CGCTCACTGTCACCAGCGATTTTATGCTC-----AAGCAGCGCTGCCGT-----TACTTAGTCGTGGAGTTCACAATGCCCGTCACCTCTCTCTCTCATCGATGCACCGACTACTTCGGCTTGTG-----------C---GCCCACCAGCACTGTACC---CTC-------TCTT------ACTACAGCAACGTCAACGACAACAACAACTTTAACGTCTGCGGCTACCCAGTGGCCTATCTCAAC-------ACCACA---AGTAAAACTT------------------T-GCTCTACSizeHit CountTotal NormTotal
No Reads
droBia1
GAAACAACGCATACTTTTCTTTTAAAGCAACTAAAAAT-A------TTTA---------------------AGCTTTGATTAAGCGCAGTCAATTACCTCCGACTTGACCAAAA-TTTTAAA-----------AGAAGATTACAAGAAAG-----------------------------------CGCGTTCTTGCTCCCCCCAGCTACCATTGATA------TCTCTGCAG---CCAA--AGCG------------------------------------------------------------------------------C---ATTAACTAGTATCGCAAT---TTC-------TTTG------ACAACGTCAACCGTAACAACAACAATAACCGCAACTGTATTGACAGCGCGTTGAACGACATGA-------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GAAACAACGCTTACCTTTGTATACGAGC--TGATGAGTCAATAGTACG--AAAGAAAACTACAACATTGCAAG-----------------------------------------------------TGAACAC---------AGCGAGAG-----------------------------------CGCGCTCGCTCTTCCCTGCATTACTATGTGC-----AAGCGGCACAGCACC-----CAATGAGCCGTGGAGTGCCCAATGCCCGTCCCCC--------------------GACCTCTACGACCTTACAAGCAATATAAC---AACAACTACCAGCACAATGCCCGT-------ATTTACCACTGTGACTTCGACACTAACAACAATAACCAACACAACAACAACTACATCT------------------ACTGCAGTCA---------------------------------C-TCAGCGCSizeHit CountTotal NormTotal
No Reads
droEug1
GAAACAACGATTACTTCTCTTTCAAAGCAACCGAAAGTAA------TGCA---------------------AGC-----------ACTGTCAATTACCCCCAACTAGACCGAAT-TCTTAAA-----------CGTAGAGAGCGAGAGAG-----------------------------------CGCTATC------CCCCTCGCTACCATCGATG------TCTCTGCAG---CCAAGGAGCG------------------------------------------------------------------------------C---AGCAACTAGCACCGCAAT---TTC-------TTTG------ACAACGTCAACCCTAACAACAACAACAACCGCAACTGTAACGACAGCGTGTTTAACGACGTCATCAGCTAGCAGCGCAAACAATAATACT----------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GTAACAACGCGTACTTTTCTTATGT---CTTCGCGACACT------TGCA---------------------AACGCAGACAACGAGCGGCCAATAACCCAAAACCCAACGAACCTTCTTGTACCAACAAATCATGAAGAGAGCA--AGAG---------------------------------------------CTCTCCCGCACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GCCCCGC-------------------T---------------------------------ATCT---GTAACAACAACAACTGGAGCAATACCGACAGCCCGCTCTACTTCGCCGTTGGCTGCACCCGCTCACGCTCTTACTG-------------------------AGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................CAACAAATCATGAAGAGAGCA--AGAG---------------------------------------------C..................................................................................................................................................................................................................................................................................................26128.00280000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000002000000000000000000100010722020000000000000000000000000000000000000000000000000000000000000000000112000000201000000000000000000000000
...........................................................................................................................CAACAAATCATGAAGAGAGCA--AGA.................................................................................................................................................................................................................................................................................................................................................24120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011200100000000000000000000000000000000000100002000000001000000000010010100000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000001031000000
...........................................................................................................................CAACAAATCATGAAGAGAGCA--AGAG---------------------------------------------...................................................................................................................................................................................................................................................................................................25113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000010000001000000000000000000100010210000000000000000000000000000000000000000000000000000000000000000001000000000000101000000000000000010000000
......................................................................................................................................................................................................TCCCGCACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GC........................................................................................................................................................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000010101130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CAACAAATCATGAAGAGAGCA--AG..................................................................................................................................................................................................................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100001000000000000000000010000110000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000
....................................CACT------TGCA---------------------AACGCAGACAACGAGCGGC............................................................................................................................................................................................................................................................................................................................................................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000100000000000100000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........TACTTTTCTTATGT---CTTCGCGACACT------........................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CAACAAATCATGAAGAGAGCA--A...................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CAACAAATCATGAAGAGAGC.......................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000020000000000000000000000000
...........................................................................................AATAACCCAAAACCCAACGAACCTTCT................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACACT------TGCA---------------------AACGCAGACAACGAGCGGC............................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCTCCCGCACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------..........................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGCGTACTTTTCTTATGT---CTTCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
......................................................................................................................................................................................................TCCCGCACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GCC.......................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TACTTTTCTTATGT---CTTCGCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CAACAAATCATGAAGAGAGCA--AGAG---------------------------------------------CTC................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ACT------TGCA---------------------AACGCAGACAACGAGCGGC............................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CACT------TGCA---------------------AACGCAGACAACGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TACCGACAGCCCGCTCTACTTCGCCGT......................................................2711.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................T---GTAACAACAACAACTGGAGCAATACC.............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCGTACTTTTCTTATGT---CTTCGCGACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................T------TGCA---------------------AACGCAGACAACGAGCGGCCAATA.......................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CAACAAATCATGAAGAGAGCA--AGAC---------------------------------------------...................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GC-------------------T---------------------------------ATCT---GTAACAACAACAACTGGAG....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CAATAACCCAAAACCCAACGAACCTT..................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAACCCAAAACCCAACGAACCTT..................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CAACAAATCATGAAGAGAGCA--AGAG---------------------------------------------CATC...............................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TACTTTTCTTATGT---CTTCGCGACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CAACAAATCATGAAGAGAGCA--AGAG---------------------------------------------CTCT...............................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GACAACGAGCGGCCAATAACCCAAA................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCTCCCGCACTTCTAGCTCCGACA..........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TACCGACAGCCCGCTCTACTTCGCC........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTTCGCCGTTGGCTGCACCCGC.........................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TCCCGCACTTCTAGCTCC..............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAACCCAAAACCCAACGAACCTTCTTG..............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGCA---------------------AACGCAGACAACGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------G.........................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCTCCCGCACTTCTAGCTCC..............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGCA---------------------AACGCAGACAACGAGCGG.............................................................................................................................................................................................................................................................................................................................................................................................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCTCCCGCACTTCTAGCTCCGACAC.........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................T---------------------------------ATCT---GTAACAACAACAACTGGAGATC.................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACTTTTCTTATGT---CTTCGCGACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ACT------TGCA---------------------AACGCAGACAACGAGCGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................TCCCGCACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------G.........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTCGCCGTTGGCTGCACCCGCT........................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTACTTCGCCGTTGGCTGCACCC...........................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CACT------TGCA---------------------AACGCAGACAACGAGCGGCATC.........................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACTGGAGCAATACCGA...........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCT---GTAACAACAACAACTGGAGC...................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TCCCGCACTTCTAGCTCCGACA..........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TCCCGCACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GCCC......................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CCCGCACTTCTAGCTCCGACAC.........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CAAAACCCAACGAACCTTCTTGTATT..........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CACT------TGCA---------------------AACGCAGACAACGAGCGG.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCTCCCGCACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GC........................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TCCCGCACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------..........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACTTTTCTTATGT---CTTCGCGACACT------........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CAACAAATCATGAAGAGAGCA--AGAG---------------------------------------------CT.................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AATAACCCAAAACCCAACGAACCTTC.................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CACT------TGCA---------------------AACGCAGACAACGAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................T---------------------------------ATCT---GTAACAACAACAACTGGAGC...................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CTCCCGCACTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GC........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................G---------------------------------------------CTCTCCCGCACTTCTAGCTCC..............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACACT------TGCA---------------------AACGCAGACAACG..................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................T---------------------------------ATCT---GTAACAACAACAACTGGAGCAA.................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GC-------------------T---------------------------------ATCT---GTAACAACAACAACTGGA.....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGTACCAACAAATCATGAAGA...........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTACTTCGCCGTTGGCTGC...............................................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTTCGCCGTTGGCTGCA..............................................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGAGCAATACCG............................................................................2020.5010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GCA---------------------AACGCAGACAACGAGCGGC............................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................CTTCTTGTACCAACAAATCATGAA.............................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTTCGCCGTTGGCTGCACCA...........................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................ACGCAGACAACGAGCGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GCCCCGT-------------------................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................A---------------------AACGCAGACAACGAGCGGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGCA---------------------AACGCAGACAACGAGCGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CGCAGACAACGAGCGGC............................................................................................................................................................................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GCC.......................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTTCGCCGTTGGCTGCACCCGCT........................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CTTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GC........................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GCCCCGC-------------------T---------------------------------ATC...........................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................TTCTAGCTCCGACACAA---------------------------------------------------------------------------------------------GCCCCGC-------------------................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCCGTTGGCTGCACCC...........................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................CTAGCTCCGACACAA---------------------------------------------------------------------------------------------GCCCCG....................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GCTCCGACACAA---------------------------------------------------------------------------------------------GCCCCGC-------------------T---------------------------------A.............................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................TGCA---------------------AACGCAGACAACGAA................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......CGCGTACTTTTCTTATGT---CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AACTGGAGCAATACCGACAGC.......................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGCA---------------------AACGCAGACAACGAG................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTTCGCCGTTGGCTGCAC.............................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CCAACGAACCTTCTTGTACCAACAAA....................................................................................................................................................................................................................................................................................................................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GTAACAACGCCTGCTTTTCTTATGT---CTCCGCGACAAC------TGAA---------------------AACGCAGGCAACGAGCGGACAATAACGCATAACCCAACGAACCTTCTTGTACCAAAAAGTCA---------AGAAAGAG-----------------------------------CGCGCTCTTACTCTCCCGCACTTCTAGGTCCAAAACAA---------------------------------------------------------------------------------------------GACCCGC-------------------T---------------------------------ATCT---GTAACAACAACAACTGGAGCAATACCGACAGCCCGCTCTACTTCGCCGTTGGCTGCACCCGTTCACGCTCTTACTGAGTCAGCGAAAACAAAAGC-GCAAGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTCAGCGAAAACAAAAGC-GCAAGA.2723.00600010005000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAGTCAGCGAAAACAAAAGC-GCA....2722.50500000011111000000
...................................................................................................................................CA---------AGAAAGAG-----------------------------------CGCGCTCTTACTCT...............................................................................................................................................................................................................................................................................................2412.00200020000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGAGTCAGCGAAAACAAAAGC-GCA....2821.50300000001011000000
............................................................................................................................................................................................................................CAA---------------------------------------------------------------------------------------------GACCCGC-------------------T---------------------------------ATCT---GTAACAACAACA...........................................................................................2711.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCGTTCACGCTCTTACTGAGT........................2411.00100000000010000000
..............................................TGAA---------------------AACGCAGGCAACGAGCGGACAA.........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
............GCTTTTCTTATGT---CTCCGCGACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
..............TTTTCTTATGT---CTCCGCGACAAC------TGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
...................................................................................................................................................GAG-----------------------------------CGCGCTCTTACTCTCCCGCACT.......................................................................................................................................................................................................................................................................................2511.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTCGCCGTTGGCTGCACCCGTT........................................2511.00100000001000000000
......................................................................................................................TGTACCAAAAAGTCA---------AGAAAGAG-----------------------------------.............................................................................................................................................................................................................................................................................................................2311.00100000000001000000
...............TTTCTTATGT---CTCCGCGACAAC------TGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
.............................................................................................TAACGCATAACCCAACGAACCTTC.................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TACCGACAGCCCGCTCTACTTCGCCG.......................................................2611.00100010000000000000
.......................................................................AACGCAGGCAACGAGCGGACAATAAC.....................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAACTGGAGCAATACCGACAGCCCGC...................................................................2611.00100000001000000000
................................................................................AACGAGCGGACAATAACGCATAACCC............................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
....................................................................................................................................................AG-----------------------------------CGCGCTCTTACTCTCCCGC..........................................................................................................................................................................................................................................................................................2111.00100000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCGCTCTACTTCGCCGTTGGC..................................................2411.00100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTTCGCCGTTGGCTGCACCCGTT........................................2711.00100000000100000000
..........................................................................................................................CCAAAAAGTCA---------AGAAAGAG-----------------------------------CGCGCTCT.....................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTTCGCCGTTGGCT.................................................1811.00100000000001000000
...............................................................................................................................................................................................................TCTAGGTCCAAAACAA---------------------------------------------------------------------------------------------GACCCGC-------------------T---------------------------------ATC...........................................................................................................2711.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGAAAACAAAAGC-GCAAGA.2420.50100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCAGCGAAAACAAAAGC-GCAAGA.2620.50100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTACTGAGTCAGCGAAAACAA............2430.33100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCACCCGTTCC......................................1670.14100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGAAAACAAAAG.........1580.13100000000001000000
droSec2
GCAACAACGCGTACTTCACCTACGT---CTCACCGACAAC------CCCA---------------------AACGCAGACATCGAGCGGTCGATAATCCATAGCCAAAGAAACCTTCTTCTACCAACAAATCA-----------AGAAAG-----------------------------------AGCGCTCCTGCTCTCCCGCTCTCTTAGCTCCGACAGAA---------------------------------------------------------------------------------------------GCCCCGC-------------------T---------------------------------ACCT---CCAACAACAACAGCTGGAGATAGACCGACAGCCCGCTCTACCTCGTCATCGGCTGCACGCGCTCACGCTCTGACTGAGTCAGCGAAAGCAAAACCGCAAGCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGCTGCACGCGCTCACG....................................2030.3311000
...........................................................................................................................CAACAAATCA-----------AGAAAG-----------------------------------AGCGCT.......................................................................................................................................................................................................................................................................................................2230.3310010
...........................................................................................................................CAACAAATCA-----------AGAAAG-----------------------------------AGCGCTCC.....................................................................................................................................................................................................................................................................................................2430.3311000
...........................................................................................................................CAACAAATCA-----------AGAAAG-----------------------------------AGCGCTCCTG...................................................................................................................................................................................................................................................................................................2630.3311000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACCTCGTCATCGGCTGCACGCGC.........................................2630.3310010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACGCGCTCACGCTCTGAC.............................2130.3311000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGCGCTCACGCTCTGACTGAGTC.......................2630.3311000
..................................................................................................CATAGCCAAAGAAACCTTCTTCTACCA.........................................................................................................................................................................................................................................................................................................................................................................27200.1022000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGGAGATAGACCGACAGCCCGCTCTA...............................................................26200.1020020
.............................................................................................................................................................................................................................................................................................................................................................................................................TGGAGATAGACCGACAGCCCGCTCTACC.............................................................28200.0511000
..................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGCTGGAGATAGACCGACA.........................................................................27200.0510010
...................................................................................................ATAGCCAAAGAAACCTTCTTCTACA..........................................................................................................................................................................................................................................................................................................................................................................25200.0511000
..................................................................................................CATAGCCAAAGAAACCTTCTT...............................................................................................................................................................................................................................................................................................................................................................................21200.0511000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCGTCATCGGCTGCAC.............................................20200.0511000
.................................................................................................................................................................................................TGCTCTCCCGCTCTCTTAGCTCCGAC...........................................................................................................................................................................................................................................................................26200.0511000
.....................................AAC------CCCA---------------------AACGCAGACATCGAGCGG.............................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGCTCTGACTGAGTCAGCGAA.................24200.0511000
....................................................................................................TAGCCAAAGAAACCTTCTT...............................................................................................................................................................................................................................................................................................................................................................................19200.0511000
.................................................................................................................................................................................................TGCTCTCCCGCTCTCTTAGCTCCGACAG.........................................................................................................................................................................................................................................................................28200.0511000
...............................................................................................................................................................................................................CTTAGCTCCGACAGAA---------------------------------------------------------------------------------------------GCC.......................................................................................................................................................................19200.0510001
................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCTGGAGATAGACCGAC..........................................................................28200.0511000
droYak3
GAAACAACGCGTACTTCCTATACGT---CTCCGCGACTTC------TGC---------------------------AGACAGCGAGCGGTCAATCACCCCTAACCCGACGAATTTACTTTTGCCAACAACTCA---------AGAAAGAG-----------------------------------CGCGTTCTTGCTCTCCCTCATTACTAGCTTCGTCACAA---------------------------------------------------------------------------------------------AACCCGCAAGCACCAAACACTTGCGAAAT---TTCTTTACGCTACG------GTGACTACAACTGCAATCAGAACAACAGCTGGAACGGTATCATCGGCTCGCTCAATTTCGTCGACGCAAGTACTTGCTCGCCC-------------------------------TGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................CTTCGTCACAA---------------------------------------------------------------------------------------------AACCCGCAAGCACCA...........................................................................................................................................................26200.5010000000000010
........................T---CTCCGCGACTTC------TGC---------------------------AGACAGCGAG................................................................................................................................................................................................................................................................................................................................................................................................................26200.25502000000003
....................................................................................................................CTTTTGCCAACAACTCA---------AGAAAGAG-----------------------------------C............................................................................................................................................................................................................................................................................................................26200.25500000000005
.............................TCCGCGACTTC------TGC---------------------------AGACAGCGAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................26200.25500000000005
..............................................................................................................................................................................................................TACTAGCTTCGTCACAA---------------------------------------------------------------------------------------------AACCCGCAAG................................................................................................................................................................27170.24404000000000
......................CGT---CTCCGCGACTTC------TGC---------------------------AGACAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000000000
...............................CGCGACTTC------TGC---------------------------AGACAGCGAGCGG.............................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000000002
..............................................TGC---------------------------AGACAGCGAGCGGTCAATCACCCCT.................................................................................................................................................................................................................................................................................................................................................................................................28200.10202000000000
..............................................................................................................................................................................................................TACTAGCTTCGTCACAA---------------------------------------------------------------------------------------------AACCCG....................................................................................................................................................................23180.06101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGGTATCATCGGCTCGCTCAATT.............................................................28200.05101000000000
.........................................................................................................................................................................................................................TCACAA---------------------------------------------------------------------------------------------AACCCGCAAGCACCAAACACT.....................................................................................................................................................27200.05101000000000
..........................................................................................................................................................................................................TCATTACTAGCTTCGTCACAA---------------------------------------------------------------------------------------------AACC......................................................................................................................................................................25200.05101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTCGACGCAAGTACTTGCTC.......................................23200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GGAACGGTATCATCGGCTCGCTCA................................................................24200.05101000000000
..........................................................................................................GACGAATTTACTTTTGCCAACAACT...................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
...........................................................................................................................CAACAACTCA---------AGAAAGAG-----------------------------------CGCGT........................................................................................................................................................................................................................................................................................................23200.05100000010000
..............................................................................................................................................................................................TCTTGCTCTCCCTCATTACTAGC.................................................................................................................................................................................................................................................................................23200.05101000000000
..................................................................................CGAGCGGTCAATCACCCCTAACC.............................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
.........................................................................................................................................................................................................................TCACAA---------------------------------------------------------------------------------------------AACCCGCAAGCACCAAACACC.....................................................................................................................................................27200.05100100000000
..............................................TGC---------------------------AGACAGCGAGCGGTCAATCACC....................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
.....................................TTC------TGC---------------------------AGACAGCGAGCGGTCAATC.......................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
..............................................................................................................................................................................................................TACTAGCTTCGTCACAA---------------------------------------------------------------------------------------------AACC......................................................................................................................................................................21200.05100000010000
..............................................................................................................AATTTACTTTTGCCAACAACTCA---------AG......................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
..................................GACTTC------TGC---------------------------AGACAGCGAGCGGT............................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
...............................................GC---------------------------AGACAGCGAGCGGTCAATCACCCC..................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
......................................TC------TGC---------------------------AGACAGCGAGCGGTCAATCACC....................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
droEre2
GAAACAACGCTCACTTTTCTAACGC---CTCCGCGACAGC------TGCC---------------------AACGCAGACAATGAGCAGTCAATAACCCATAGCCCAACGAACCTTTTTTTGTCAACAAATCA---------AGAAAGAG-----------------------------------TGCGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT---CCAACAACAACAGCTGGAGCAATATCGACAGCCCGCTGAATTTCGTCGTCGACCGCATCCGCTCACGCTCTCACTG-------------------------AGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACAGCCCGCTGAATTTCGTCGTC.....................................................2711.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGCTGAATTTCGTCGTCGACC.................................................2411.0011000000
...........CACTTTTCTAACGC---CTCCGCGACAGC------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATATCGACAGCCCGCTGAATT.............................................................2511.0011000000

Generated: 05/18/2015 at 08:24 AM