ID:dwi_3791 |
Coordinate:scf2_1100000004954:5080545-5080719 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in alignment | mismatch in read |
|
|
|
|
No conservation details. |
| -11.8 | -11.7 |
 |
 |
exon [dwil_GLEANR_6652:1]; CDS [Dwil\GK23332-cds]; exon [dwil_GLEANR_6652:2]; CDS [Dwil\GK23332-cds]; intron [Dwil\GK23332-in]
| Name | Class | Family | Strand |
| AT_rich | Low_complexity | Low_complexity | + |
| (TTAAA)n | Simple_repeat | Simple_repeat | + |
| ##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## ATGAGACCGCCAACTTGCGGAGGATCCCCATTGGCGACATTCAGGAGGCGGTGAAGTCCATTTTTAATTTATAATAATTATTAAATTAAATTAAATTAGAATAAATTTTGTGGGAATATCTCTAATTGCTTATTTTTGTTAAATGAATTTAGGTAATAGCCTCAAAATTTTGAACTGGCAAAAAAAGGTTCCCATATTTTATGCTGTGTTTCGTACAATTTTTAGGATTGCAATGATGGTGGCAATGACGATGAACCATCTTCATGGAAGCGCGC ******************************************************************************************************************.............((((.(((((((((...((((((((((....))))..)))))).....))))))))).))))************************************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M045 female body |
V118 embryo |
V117 male body |
M020 head |
|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................CAAAATTTTGAACTGGCAAAAAAAA........................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................................................CAAAATTTTGAACTGGCAAAAAAAGGT...................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................AAATTTTGAACTGGCAAAAAA.......................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ........................TCCCCATTGGCGACATTCAGGAGGCGG................................................................................................................................................................................................................................ | 27 | 0 | 3 | 1.00 | 3 | 2 | 1 | 0 | 0 |
| .....................................................................................................................................................................................................................TACAATTTTTAGGATTGCAATGATGG.................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ......................................................................................................................................................................ATTTTGAACTGGCGAACACAGG....................................................................................... | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................................AATATCTCTAATTGCTTATTTTTG......................................................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................................................................................................................................GTGTTTCGTACAATTTTTAGGATTG............................................. | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...................................................................................................................................................................AAAATTTTGAACTGGCAAAAAAAGGT...................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...............................TGGCGACATTCAGGAGGCGGTGAA............................................................................................................................................................................................................................ | 24 | 0 | 3 | 0.67 | 2 | 1 | 1 | 0 | 0 |
| ............................CATTGGCGACATTCAGGAGGC.................................................................................................................................................................................................................................. | 21 | 0 | 3 | 0.67 | 2 | 1 | 1 | 0 | 0 |
| ..................................................................................................................................................................................................................................ATTGCAATGATGGTGGCAATGACG......................... | 24 | 0 | 5 | 0.40 | 2 | 2 | 0 | 0 | 0 |
| .....................................................................................................................................................................................................................................................TGACGATGAACCATCTTCATGGAAGCGT.. | 28 | 1 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 |
| ..............................................................................................................................................................................................................................................GTGGCAATGACGATGAACCATCTTCA........... | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .....................................CATTCAGGAGGCGGTGAAGTCCA....................................................................................................................................................................................................................... | 23 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............TTGCGGAGGATCCCCATTGGCGACAT........................................................................................................................................................................................................................................... | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............TTGCGGAGGATCCCCATTGGCGACA............................................................................................................................................................................................................................................ | 25 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..................................CGACATTCAGGAGGCGGTGAAT........................................................................................................................................................................................................................... | 22 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .....................................................................................................................................................................................................................................................TGACGATGAACCATCTTCATGGAAGCGC.. | 28 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..........................CCCATTGGCGACATTCAGGAGGCGG................................................................................................................................................................................................................................ | 25 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ....................................ACATTCAGGAGGCGGTGAAGTCC........................................................................................................................................................................................................................ | 23 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .............................ATTGGCGACATTCAGGAGGCG................................................................................................................................................................................................................................. | 21 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....................................ACATTCAGGAGGCGGTGAAGTCCA....................................................................................................................................................................................................................... | 24 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ................................................................................................................................................................................................................................................GGCAATGACGATGAACCATCTTCA........... | 24 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .................................GCGACATTCAGGAGGCGGTGAA............................................................................................................................................................................................................................ | 22 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............................TTGGCGACATTCAGGAGGCGG................................................................................................................................................................................................................................ | 21 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .................................GCGACATTCAGGAGGCGGTGAAGTC......................................................................................................................................................................................................................... | 25 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .....................................................................................................................................................................................................................................................TGACGATGAACCATCTTCATGGAAGC.... | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............TTGCGGAGGATCCCCATTGGCG............................................................................................................................................................................................................................................... | 22 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................................................GTGGCAATGACGATGAACCATCT.............. | 23 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................................................................ATGACGATGAACCATCTTCATGG........ | 23 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .................................GCGACATTCAGGAGGCGGTGA............................................................................................................................................................................................................................. | 21 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...............TGCGGAGGATCCCCATTGGCG............................................................................................................................................................................................................................................... | 21 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................................................TGCAATGATGGTGGCAATGACGATGAAC................... | 28 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................................................TGCAATGATGGTGGCAATGAC.......................... | 21 | 0 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................................TAGCATTGCAATGATGGTGGCAATGA........................... | 26 | 1 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 |
| ..............................................................................................................................................................................................................................TAGGATTGCAATGATGGTGGCAA.............................. | 23 | 0 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| ................................................................................................................................................................................................................................GGATTGCAATGATGGTGGCAAT............................. | 22 | 0 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................................ATTGCAATGATGGTGGCAATG............................ | 21 | 0 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................................................................................................................................................TTAGGATAGCAATGACCGTG.................................. | 20 | 3 | 11 | 0.09 | 1 | 0 | 0 | 0 | 1 |
| ..............................................................................................................................................................................................................................TAGGATTGCATTGAGGGTGGAAATG............................ | 25 | 3 | 11 | 0.09 | 1 | 0 | 1 | 0 | 0 |
| ..................................................................................................................................................................................................TAATTTGTGCTGGGTTTCGT............................................................. | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
| .............................................................................................................................................................................................................................................GGTGAGAATGACGCTGAAC................... | 19 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
|
TACTCTGGCGGTTGAACGCCTCCTAGGGGTAACCGCTGTAAGTCCTCCGCCACTTCAGGTAAAAATTAAATATTATTAATAATTTAATTTAATTTAATCTTATTTAAAACACCCTTATAGAGATTAACGAATAAAAACAATTTACTTAAATCCATTATCGGAGTTTTAAAACTTGACCGTTTTTTTCCAAGGGTATAAAATACGACACAAAGCATGTTAAAAATCCTAACGTTACTACCACCGTTACTGCTACTTGGTAGAAGTACCTTCGCGCG
**************************************************************************************.............((((.(((((((((...((((((((((....))))..)))))).....))))))))).))))****************************************************************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M045 female body |
V118 embryo |
V117 male body |
M020 head |
|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................................TACTGCTACTTGGTAGAAGTACCTT...... | 25 | 0 | 3 | 8.67 | 26 | 25 | 1 | 0 | 0 |
| .............................................................................................................................................................................................AGGGTATAAAATACGACACAAAGCATGT.......................................................... | 28 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 | 0 |
| ...................CTCCTAGGGGTAACCGCTGTAAGTCCT..................................................................................................................................................................................................................................... | 27 | 0 | 3 | 4.00 | 12 | 8 | 0 | 4 | 0 |
| ..............................................CCGCCACTTCAGGTAAAAATTAAATAT.......................................................................................................................................................................................................... | 27 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................................................................TACTGCTACTTGGTAGAAGTACCT....... | 24 | 0 | 3 | 3.67 | 11 | 9 | 1 | 1 | 0 |
| ..............................................................................................................................................................CGGAGTTTTAAAACTTGACCGTTTTTT.......................................................................................... | 27 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 |
| ..............................................................................................................................................................................GACCGTTTTTTTCCAAGGGTATAAAAT.......................................................................... | 27 | 0 | 2 | 3.00 | 6 | 5 | 1 | 0 | 0 |
| ...........................GGTAACCGCTGTAAGTCCTCCGCCACT............................................................................................................................................................................................................................. | 27 | 0 | 3 | 3.00 | 9 | 9 | 0 | 0 | 0 |
| ...................CTCCTAGGGGTAACCGCTGTAAGT........................................................................................................................................................................................................................................ | 24 | 0 | 3 | 2.67 | 8 | 2 | 4 | 2 | 0 |
| .................GCCTCCTAGGGGTAACCGCTGTAAGT........................................................................................................................................................................................................................................ | 26 | 0 | 3 | 2.33 | 7 | 5 | 1 | 1 | 0 |
| ..............................................................................................................................................................................................................................ATCCTAACGTTACTACCACCGTTACT........................... | 26 | 0 | 5 | 2.20 | 11 | 10 | 1 | 0 | 0 |
| ........................................................................................................................................................................................................................................................GCTACTTGGTAGAAGTACCTTCGCGC. | 26 | 0 | 3 | 2.00 | 6 | 3 | 3 | 0 | 0 |
| ......................................................................................................................................................................................TTTTCCAAGGGTATAAAATACGACAC................................................................... | 26 | 0 | 1 | 2.00 | 2 | 0 | 1 | 1 | 0 |
| ...............................................CGCCACTTCAGGTAAAAATT................................................................................................................................................................................................................ | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 |
| ..................CCTCCTAGGGGTAACCGCTGTAAGT........................................................................................................................................................................................................................................ | 25 | 0 | 3 | 2.00 | 6 | 0 | 5 | 1 | 0 |
| ..................................................................................................CTTATTTAAAACACCCTTATAGAGAT....................................................................................................................................................... | 26 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................GGGTATAAAATACGACACAAAGCAT............................................................ | 25 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 |
| ...................................................................................................................TATAGAGATTAACGAATAAAAACAAT...................................................................................................................................... | 26 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 |
| .....................CCTAGGGGTAACCGCTGTAAGTCCT..................................................................................................................................................................................................................................... | 25 | 0 | 3 | 2.00 | 6 | 3 | 2 | 1 | 0 |
| ...............................................................................................................................................................GGAGTTTTAAAACTTGACCGTTTTTT.......................................................................................... | 26 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 |
| ............................................................................................................................................................................................AAGGGTATAAAATACGACACAAAGCAT............................................................ | 27 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 |
| .................TCCTCCTAGGGGTAACCGCTGTAAGT........................................................................................................................................................................................................................................ | 26 | 1 | 3 | 2.00 | 6 | 0 | 5 | 1 | 0 |
| ................................................................................................................................................................................................................................CCTAACGTTACTACCACCGTTACTGCT........................ | 27 | 0 | 5 | 1.80 | 9 | 9 | 0 | 0 | 0 |
| ...............ACGCCTCCTAGGGGTAACCGCTGT............................................................................................................................................................................................................................................ | 24 | 0 | 3 | 1.67 | 5 | 4 | 1 | 0 | 0 |
| ....................TCCTAGGGGTAACCGCTGTAAGTCCT..................................................................................................................................................................................................................................... | 26 | 0 | 3 | 1.67 | 5 | 3 | 1 | 1 | 0 |
| ..............................................................................................................................................................................................................................ATCCTAACGTTACTACCACCGTTACTGC......................... | 28 | 0 | 5 | 1.60 | 8 | 7 | 1 | 0 | 0 |
| ......................................................................................................................................................................................................................................GTTACTACCACCGTTACTGCTACTT.................... | 25 | 0 | 4 | 1.50 | 6 | 5 | 1 | 0 | 0 |
| .............GAACGCCTCCTAGGGGTAACCGCTGT............................................................................................................................................................................................................................................ | 26 | 0 | 3 | 1.33 | 4 | 4 | 0 | 0 | 0 |
| ...............................................................................................................................................................................................................................................ACCGTTACTGCTACTTGGTAGAAGT........... | 25 | 0 | 3 | 1.33 | 4 | 4 | 0 | 0 | 0 |
| .........................................GTCCTCCGCCACTTCAGGTAAAAAT................................................................................................................................................................................................................. | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...............................................................................................................................................................GGAGTTTTAAAACTTGACCGTTTTT........................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ........................................AGTCCTCCGCCACTTCAGGTAAAAAT................................................................................................................................................................................................................. | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .......................................................................................................................................................................AAAACTTGACCGTTTTTTTCCAAGGGT................................................................................. | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................................................................................................................AGGGTATAAAATACGACACAAAGCATGTT......................................................... | 29 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................CCGCCACTTCAGGTAAAAATTAAAT............................................................................................................................................................................................................ | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ......................................................................................................................AGAGATTAACGAATAAAAACAATTTACT................................................................................................................................. | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .....................................................................................................................................................................................................................................CGTTACTACCACCGTTACTGCTAC...................... | 24 | 0 | 3 | 1.00 | 3 | 3 | 0 | 0 | 0 |
| .......................................................................................................TTAAAACACCCTTATAGAGATTAACGAAT............................................................................................................................................... | 29 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ........................................................................................................TAAAACACCCTTATAGAGATTAACGAAT............................................................................................................................................... | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ................................................GCCACTTCAGGTAAAAATTAAATATT......................................................................................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................CCGCCACTTCAGGTAAAAATTAAA............................................................................................................................................................................................................. | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...............................................................................................................................................................................ACCGTTTTTTTCCAAGGGTATAAAAT.......................................................................... | 26 | 0 | 2 | 1.00 | 2 | 2 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................................................ACGTTACTACCACCGTTACTGCTACTT.................... | 27 | 0 | 3 | 1.00 | 3 | 3 | 0 | 0 | 0 |
| ................................................................................................................................................................GAGTTTTAAAACTTGACCGTTTTTTT......................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ...............................................................................................................................................................GGAGTTTTAAAACTTGACCGTTTTTTT......................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................................................................................................TGACCGTTTTTTTCCAAGGGTATAAAAT.......................................................................... | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .....................................................................................................................................................................................................................................CGTTACTACCACCGTTACTGCTACT..................... | 25 | 0 | 3 | 1.00 | 3 | 2 | 1 | 0 | 0 |
| ............................................................................................................................TAACGAATAAAAACAATTTACTTAAAT............................................................................................................................ | 27 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ....................................................................................................TATTTAAAACACCCTTATAGAGATT...................................................................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .....................................................................................................................................................................................................................................................ACTGCTACTTGGTAGAAGTACCTT...... | 24 | 0 | 3 | 1.00 | 3 | 2 | 0 | 1 | 0 |
| ....................................................................................................................................................................................TTTTTTCCAAGGGTATAAAATACGACAC................................................................... | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................TTAATCTTATTTAAAACACCCTTAT............................................................................................................................................................. | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................CCGCCACTTCAGGTAAAAATTAAATA........................................................................................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................GTAACCGCTGTAAGTCCTCCGCCACT............................................................................................................................................................................................................................. | 26 | 0 | 3 | 1.00 | 3 | 3 | 0 | 0 | 0 |
| .................................................................................................................................................................................................................AAGCATGTTAAAAATCCTAACGTTACT....................................... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................................TAACGTTACTACCACCGTTACTGCT........................ | 25 | 0 | 5 | 1.00 | 5 | 5 | 0 | 0 | 0 |
| ............................................CTCCGCCACTTCAGGTAAAAATTAAAT............................................................................................................................................................................................................ | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .........................................................................................................AAAACACCCTTATAGAGATTAACGAAT............................................................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ................................................................................................................................................................................CCGTTTTTTTCCAAGGGTATAAAAT.......................................................................... | 25 | 0 | 2 | 1.00 | 2 | 1 | 1 | 0 | 0 |
| ...........................................................................................................AACACCCTTATAGAGATTAAC................................................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .............................................................................................................................................................................................................................AATCCTAACGTTACTACCACCGTTACT........................... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .....................CCTAGGGGTAACCGCTGTAAGT........................................................................................................................................................................................................................................ | 22 | 0 | 3 | 1.00 | 3 | 0 | 3 | 0 | 0 |
| ...................................................................................................TTATTTAAAACACCCTTATAGAGAT....................................................................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .....................................................................................................................................................................................................................ATGTTAAAAATCCTAACGTTACTAC..................................... | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........................GGGTAACCGCTGTAAGTCCTCCGCCACT............................................................................................................................................................................................................................. | 28 | 0 | 3 | 1.00 | 3 | 3 | 0 | 0 | 0 |
| ........................................................................................TTAATTTAATCTTATTTAAAACACCCT................................................................................................................................................................ | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................................................................................................................GTCGGAGTTTTAAAACTTGACCGTTTT............................................................................................ | 27 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .......................................................................................................................................................................................................................GTTAAAAATCCTAACGTTACTACCACCGT............................... | 29 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ......................................................................................................................................................................................................................................GTTACTACCACCGTTACTGCTACT..................... | 24 | 0 | 4 | 1.00 | 4 | 4 | 0 | 0 | 0 |
| ............................................................................................................................................................................................AAGGGTATAAAATACGACACAAAGCA............................................................. | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................ACGAATAAAAACAATTTACTTAAATCCAT........................................................................................................................ | 29 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...............................................................................................................................CGAATAAAAACAATTTACTTAAATCCAT........................................................................................................................ | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............TGAACGCCTCCTAGGGGTAACCGCTGT............................................................................................................................................................................................................................................ | 27 | 0 | 3 | 0.67 | 2 | 2 | 0 | 0 | 0 |
| .........................GGGGTAACCGCTGTAAGTCCTCCGC................................................................................................................................................................................................................................. | 25 | 0 | 3 | 0.67 | 2 | 1 | 1 | 0 | 0 |
| ........................AGGGGTAACCGCTGTAAGTCCTCCG.................................................................................................................................................................................................................................. | 25 | 0 | 3 | 0.67 | 2 | 0 | 2 | 0 | 0 |
| ................................................................................................................................................................................................................................................CCGTTACTGCTACTTGGTAGAAGT........... | 24 | 0 | 3 | 0.67 | 2 | 2 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................AAAATACGACACAAAGCATGTTAAAA..................................................... | 26 | 0 | 3 | 0.67 | 2 | 2 | 0 | 0 | 0 |
| ....................................TGTAAGTCCTCCGCCACTTCAGGT....................................................................................................................................................................................................................... | 24 | 0 | 3 | 0.67 | 2 | 2 | 0 | 0 | 0 |
| ...............ACGCCTCCTAGGGGTAACCGCTGTAAGT........................................................................................................................................................................................................................................ | 28 | 0 | 3 | 0.67 | 2 | 1 | 0 | 1 | 0 |
| ............................................................................................................................................................................................................................................ACCACCGTTACTGCTACTTGGTAGAAGT........... | 28 | 0 | 3 | 0.67 | 2 | 1 | 1 | 0 | 0 |
| .................................................................................................................................................................................................................................................CGTTACTGCTACTTGGTAGAAGTACCT....... | 27 | 0 | 3 | 0.67 | 2 | 2 | 0 | 0 | 0 |
| ..................TCTCCTAGGGGTAACCGCTGTAAGT........................................................................................................................................................................................................................................ | 25 | 1 | 3 | 0.67 | 2 | 1 | 0 | 1 | 0 |
| ............TGAACGCCTCCTAGGGGTAACCGCT.............................................................................................................................................................................................................................................. | 25 | 0 | 3 | 0.67 | 2 | 1 | 0 | 1 | 0 |
| .............................................................................................................................................................................................................................................CCACCGTTACTGCTACTTGGTAGAAGT........... | 27 | 0 | 3 | 0.67 | 2 | 1 | 1 | 0 | 0 |
| ...................................................................................................................................................................................................................................AACGTTACTACCACCGTTACTGCTAC...................... | 26 | 0 | 3 | 0.67 | 2 | 2 | 0 | 0 | 0 |
| ...........TTGAACGCCTCCTAGGGGTAACCGCTGT............................................................................................................................................................................................................................................ | 28 | 0 | 3 | 0.67 | 2 | 2 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................................ATCCTAACGTTACTACCACCGTTACTGCT........................ | 29 | 0 | 5 | 0.60 | 3 | 3 | 0 | 0 | 0 |
| .................................................................................................................................................................................................................................CTAACGTTACTACCACCGTTACTGCT........................ | 26 | 0 | 5 | 0.60 | 3 | 3 | 0 | 0 | 0 |
| .................................................................................................................................................................................CGTTTTTTTCCAAGGGTATAAAAT.......................................................................... | 24 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 |
| ..............................................................................................................................................................................GACCGTTTTTTTCCAAGGGTA................................................................................ | 21 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| .........................................................................................................................................................................................................................................ACTACCACCGTTACTGCTACTTGGT................. | 25 | 0 | 4 | 0.50 | 2 | 2 | 0 | 0 | 0 |
| ....................................................................................................................................................AATCCATTATCGGAGTTTTAA.......................................................................................................... | 21 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 |
| .............................................................................................................................................TTACTTAAATCCATTATCGGAGTTTT............................................................................................................ | 26 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................TTTTTTCCAAGGGTATAAAA........................................................................... | 20 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| ................................................................................................................................................................................CCGTTTTTTTCCAAGGGTAT............................................................................... | 20 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 |
| ................................................................................................................................................................................................................................CCTAACGTTACTACCACCGTTACTGC......................... | 26 | 0 | 5 | 0.40 | 2 | 2 | 0 | 0 | 0 |
| .ACTCTGGCGGTTGAACGCCTCCT........................................................................................................................................................................................................................................................... | 23 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ........................AGGGGTAACCGCTGTAAGTCCTCCGC................................................................................................................................................................................................................................. | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....................TCCTAGGGGTAACCGCTGTAAGTCCTCC................................................................................................................................................................................................................................... | 28 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..........GTTGAACGCCTCCTAGGGGTAACCGC............................................................................................................................................................................................................................................... | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..................CCTCCTAGGGGTAACCGCTGTAAG......................................................................................................................................................................................................................................... | 24 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..........................GGGTAACCGCTGTAAGTCCT..................................................................................................................................................................................................................................... | 20 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...................TTCCTAGGGGTAACCGCTGTAAGTCCT..................................................................................................................................................................................................................................... | 27 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....TTGGCGGTTGAACGCCTCCTAGGGGT..................................................................................................................................................................................................................................................... | 26 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ............TGAACGCCTCCTAGGGGTAACCGCTG............................................................................................................................................................................................................................................. | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..................CCTCCTAGGGGTAACCGCTCTAAGT........................................................................................................................................................................................................................................ | 25 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ......GGCGGTTGAACGCCTCCTAGG........................................................................................................................................................................................................................................................ | 21 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ...................CTCCTAGGGGTAACCGCTGTAAGTC....................................................................................................................................................................................................................................... | 25 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .................................................................................................................................................................................................................................................CGTTACTACTACTTGGTAGAAGTACCT....... | 27 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .....................................................................................................................................................................................................................................................ACTGCTACCTGGTAGAAGTACCTT...... | 24 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ......TGCGGTTGAACGCCTCCTAGGGGTAA................................................................................................................................................................................................................................................... | 26 | 1 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 |
| ....................................TGTAAGTCCTCCGCCACTTCAGGTA...................................................................................................................................................................................................................... | 25 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ....................................................................................................................................................................................................................................................TACTGCTACTTGGTAGAAGTACGT....... | 24 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ...........TTGAACGCCTCCTAGGGGTAACCGCTCG............................................................................................................................................................................................................................................ | 28 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................................................GTTACTGCTACTTGGTAGAAGTACCTT...... | 27 | 0 | 3 | 0.33 | 1 | 0 | 0 | 0 | 1 |
| ...........................................................................................................................................................................................................................................TACCACCGTTACTGCTACTTGGTAGAAGT........... | 29 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............................AACCGCTGTAAGTCCTCCGCCACTT............................................................................................................................................................................................................................ | 25 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...........................ATTAACCGCTGTAAGTCCTCCGCCACTT............................................................................................................................................................................................................................ | 28 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...........................GGTAACCGCTGTAAGTCCTCCGCCACTTT........................................................................................................................................................................................................................... | 29 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................................................ACGTTACTACCACCGTTACTGCTACT..................... | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ............................GTAACCGCTGTAAGTCCTCCGCCACTT............................................................................................................................................................................................................................ | 27 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ................................................................................................................................................................................................................................CCTAACGTTACTACCACCGTTACTGCTA....................... | 28 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............AACGCCTCCTAGGGGTAACCGCTGT............................................................................................................................................................................................................................................ | 25 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..................CCTCCTAGGGGTAACCGCTGTAAGTCCT..................................................................................................................................................................................................................................... | 28 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..................................GCTGTAAGTCCTCCGCCACT............................................................................................................................................................................................................................. | 20 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .........................................................................................................................................................................................................................................................CTACTTGGTAGAAGTACCTTCGCGC. | 25 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..................CCTCCTAGGGGTAACCGCTTTAAGT........................................................................................................................................................................................................................................ | 25 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................................AAACGTTACTACCACCGTTACTGCTACTT.................... | 29 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...............................ACCGCTGTAAGTCCTCCGCCACTT............................................................................................................................................................................................................................ | 24 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .....TGGCGGTTGAACGCCTCCTAGGGGT..................................................................................................................................................................................................................................................... | 25 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ...........................................................................................................................................................................................................................................AACCACCGTTACTGCTACTTGGTAGAAGT........... | 29 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .......GCGGTTGAACGCCTCCTAGGGGTAA................................................................................................................................................................................................................................................... | 25 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ....................................................................................................................................................................................................................................................TACTGCTACTTGGTAGAAGT........... | 20 | 0 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 |
| ....................................................................................................................................................................................................................................................TACTGCTACTTGGTAGAAGTAC......... | 22 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .....................................................................................................................................................................................................................................CGTTACTCCCACCGTTACTGCTACTT.................... | 26 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ...................CTCCTAGGGGTAGCCGCTGTAAGT........................................................................................................................................................................................................................................ | 24 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....CTGGCGGTTGAACGCCTCCTAGGGGTA.................................................................................................................................................................................................................................................... | 27 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............AACGCCTCCTAGGGGTAACCGCTGTAA.......................................................................................................................................................................................................................................... | 27 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...........TTGAACGCCTCCTAGGGGTAACCGCT.............................................................................................................................................................................................................................................. | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ......................CTAGGGGTAACCGCTGTAAGTCCT..................................................................................................................................................................................................................................... | 24 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .................................CGCTGTAAGTCCTCCGCCACTTCAGGT....................................................................................................................................................................................................................... | 27 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .....................................................................................................................................................................................................................................CGTTACTACCACCGTTACTGCTACTT.................... | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .................GGCTCCTAGGGGTAACCGCTGTAAGT........................................................................................................................................................................................................................................ | 26 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ...................CTCCTAGGGGTAACCGCTGT............................................................................................................................................................................................................................................ | 20 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| .........................GGGGTAACCGCTGTAAGTCCTC.................................................................................................................................................................................................................................... | 22 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...........................GGTAACCGCTGTAAGTCCTCCGCCACTT............................................................................................................................................................................................................................ | 28 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................AAAATACGACACAAAGCATGTTAAA...................................................... | 25 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...........GTGAACGCCTCCTAGGGGTAACCGCT.............................................................................................................................................................................................................................................. | 26 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..........................GGGTAACCGCTGTAAGTCCTCCGC................................................................................................................................................................................................................................. | 24 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .........................GGGGTAACCGCTGTAAGTCCT..................................................................................................................................................................................................................................... | 21 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .............................TAACCGCTGTAAGTCCTCCGCCACT............................................................................................................................................................................................................................. | 25 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ............TGAACTCCTCCTAGGGGTAACCGCTG............................................................................................................................................................................................................................................. | 26 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .................GCCTCCTAGGGGTAACCGCTGTAAG......................................................................................................................................................................................................................................... | 25 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...........GTGAACGCCTCCTAGGGGTAACCGCTGT............................................................................................................................................................................................................................................ | 28 | 1 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 |
| ....................................................................................................................................................................................................................................ACGTTACTACCACCGTTACTGCTAC...................... | 25 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...................................................................................................................................................................................................................................AACGTTACTACCACCGTTACTGCTACT..................... | 27 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ................CGCCTCCTAGGGGTAACCGCTGTAAGT........................................................................................................................................................................................................................................ | 27 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .....................CCTAGGGGTAACCGCTGTAAGTCC...................................................................................................................................................................................................................................... | 24 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................................................CACCGTTACTGCTACTTGGTAGAAGT........... | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ........................................................................................................................................................................................................................................................GCTACTTGGTAGAAGTACCTTCGCGA. | 26 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| .....................CCTAGGGGTAACCGCTGTAAG......................................................................................................................................................................................................................................... | 21 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....................TCCTAGGGGTAACCGCTGTAAGT........................................................................................................................................................................................................................................ | 23 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...TCTGGCGGTTGAACGCCTCCTAGGGGT..................................................................................................................................................................................................................................................... | 27 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ................CGCCTCCTAGGGGTAACCGATGT............................................................................................................................................................................................................................................ | 23 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| .......GCGGTTGAACGCCTCCTAGGGGTAAC.................................................................................................................................................................................................................................................. | 26 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .................................................................................................................................................................................................................................................CGTTACTGCTACTTGGTAGAAGTACCTT...... | 28 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..........GTTGAACGCCTCCTAGGGGTAACCGCT.............................................................................................................................................................................................................................................. | 27 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................................................................................................................................................................AGTCACCGTTACTGCTACTTGGTAGAAGT........... | 29 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ...........................GGTAACCGCTGTAAGTCCTCCG.................................................................................................................................................................................................................................. | 22 | 0 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....CTGGCGGTTGAACGCCTCCTAGGGGT..................................................................................................................................................................................................................................................... | 26 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ......................................................................................................................................................................................................................................GTTACTACCACCGTTACTGCTA....................... | 22 | 0 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 |
| ......................................................................................................................................................................................................................................GTTACTACCACCGTTACTGCTACTTGG.................. | 27 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 |
| ......................................................................................................................................................................................................................................GTTACTACCACCGTTACTGCTACTTG................... | 26 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 |
| ................................................................................................................................................................................................................................CCTAACGTTACTACCGCCGTTACTGCT........................ | 27 | 1 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| .......GCGGTTGAACGCCTCCTAGGGGTA.................................................................................................................................................................................................................................................... | 24 | 0 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................................................................................................................................................................TACCACCGTTACTGCTACTT.................... | 20 | 0 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................................ATCCTAACATTACTACCACCGTTACTGCT........................ | 29 | 1 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| .................................................................................................................................................................................................................................CTAACGTTACTACCACCGTTACTGC......................... | 25 | 0 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| ...................................................................................................................................................................................................................................AACGTTACTACCACCGTTACTGCT........................ | 24 | 0 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| .................................................................................................................................................................................................................................CTAACGTTACTACCACCGTTACTG.......................... | 24 | 0 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 |
| ..............................................................................................................................................................................................................................ATCCTAACGTTACTACCACCGTTACTG.......................... | 27 | 0 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................................ATCCTAACGTTACTACCGCCGTTAC............................ | 25 | 1 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................................................................................................................................................................................................................TTCTCGGTAGAAGTAACTTC..... | 20 | 3 | 20 | 0.10 | 2 | 2 | 0 | 0 | 0 |
| ....................TCCTTGGGGTAAGTGCTGT............................................................................................................................................................................................................................................ | 19 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
| .................................................................................................................................................................................................TAGAAAATTCGACACAAA................................................................ | 18 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 |
| Species | Coordinate | ID | Alignment |
|---|---|---|---|
| droWil2 | scf2_1100000004954:5080495-5080769 + | dwi_3791 | ATGAGACCGCCAACTTGCGGAGGATCCCCATTGGCGACATTCAGGAGGCGGTGAAGTCCATTTTTAATTTATAATAATTATTAAATTAAATTAAATTAGAATAAATTTTGTGGGAATATCTCTAATTGCTTATTTTTGTTAAATGAATTTAGGTAATAGCCTCAAAATTTTGAACTGGCAAAAAAAGGTTCCCATATTTTATGCTGTGTTTCGTACAATTTTTAGGATTGCAATGATGGTGGCAATGACGATGAACCATCTTCATGGAAGCGCGC |
| Species | Read alignment | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| droWil2 |
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Generated: 05/18/2015 at 08:13 AM