ID:

dwi_3790

 Coordinate:

scf2_1100000004954:5066277-5066479 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.4 -13.5

Flybase annnotation

exon [dwil_GLEANR_6651:4]; CDS [Dwil\GK23331-cds]; exon [dwil_GLEANR_6651:5]; CDS [Dwil\GK23331-cds]; intron [Dwil\GK23331-in]

Repeatable elements

NameClassFamilyStrand
T-richLow_complexityLow_complexity+
mature
  1. dwi_3783  scf2_1100000004954:5048890-5048913 +
  2. scf2_1100000004954:5053006-5053029 -
  3. dwi_3790  scf2_1100000004954:5066317-5066340 +
  4. scf2_1100000004954:5070488-5070511 -
star
  1. dwi_3783  scf2_1100000004954:5048860-5048884 +
  2. scf2_1100000004954:5053035-5053059 -
  3. dwi_3790  scf2_1100000004954:5066287-5066311 +
  4. scf2_1100000004954:5070517-5070541 -

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TATTGAGCAAGTCTGCTAAAACGGCGAATATTGGCACGCGCCAGGGAAAGGTTGCAATTCTTGGCACTCAATGTGACCAAAGCTGTTGTTACAAATGTAATTACAGAGCGACGGCAATAAATTTTTTTCATATTGTTTTTGTTTTTTTTTTTTTAAGTTTGTAGTTTAATTTAAAAAATGTTACTATATTTTTATTTTAATTTCCTTTACTTAAAATTTTTTACTTTTGTTTTCATTTATCCAACAAATTTAGGCTGACAACATGAAGCAGCAGACGGATGCCCAACTGAAGCTGTTTGAGGT
************************************************************................((....((((.(((((....))))).))))......))********************************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
 M020
head
..........................................................................................ACAAATGTAATTACAGAGCGACGG............................................................................................................................................................................................. 24 0 4 4.75 19 19 0 0 0 0
..............................................AAAGGTTGCAATTCTTGGCACTCA......................................................................................................................................................................................................................................... 24 0 4 1.50 6 6 0 0 0 0
..........................................................................................ACAAATGTAATTACAGAGCGACGGCA........................................................................................................................................................................................... 26 0 4 1.25 5 1 4 0 0 0
.........................................................................................................................................................................................................................................CATTTATCCAACAAATTTAGGCTGA............................................. 25 0 6 1.17 7 6 0 0 0 1
.............................................................................................................................................................................................................................................................................AGCAGACGGATGCCCAACTGAAG........... 23 0 5 1.00 5 4 1 0 0 0
..........................................................................................ACAAATGTAATTACAGAGCGACG.............................................................................................................................................................................................. 23 0 4 1.00 4 4 0 0 0 0
.........................................................................................................................................................................................................................................CATTTATCCAACAAATTTAGGCTG.............................................. 24 0 6 0.83 5 5 0 0 0 0
..........................................................................................ACAAATGTAATTACAGAGCGACGGCAA.......................................................................................................................................................................................... 27 0 4 0.75 3 2 1 0 0 0
...........TCTGCTAAAACGGCGAATATTGGCACG......................................................................................................................................................................................................................................................................... 27 0 7 0.71 5 5 0 0 0 0
.............................................................................................................................................................................................................................................................................AGCAGACGGATGCCCAACTGAAGC.......... 24 0 5 0.60 3 3 0 0 0 0
.........................................................................................................................................................................................................................................CATTTATCCAACAAATTTAGGCTGACA........................................... 27 0 6 0.50 3 3 0 0 0 0
.........................................................................................................................................................................................................................................CATTTATCCAACAAATTTAGGCT............................................... 23 0 6 0.50 3 2 1 0 0 0
..............................................AAAGGTTGCAATTCTTGGCACT........................................................................................................................................................................................................................................... 22 0 4 0.50 2 2 0 0 0 0
..............................................AAAGGTTGCAATTCTTGGCACTC.......................................................................................................................................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0
.........................................................................................TACAAATGTAATTACAGAGCGACGG............................................................................................................................................................................................. 25 0 4 0.50 2 2 0 0 0 0
.........................................................................TGACCAAAGCTGTTGTTACAAATG.............................................................................................................................................................................................................. 24 0 4 0.50 2 1 1 0 0 0
............................................................TTGGCACTCAATGTGACCAAAGCTG.......................................................................................................................................................................................................................... 25 0 4 0.50 2 2 0 0 0 0
..........................................................................................ACAAATGTAATTACAGAGCGACGGC............................................................................................................................................................................................ 25 0 4 0.50 2 2 0 0 0 0
..................AAACGGCGAATATTGGCACGCG....................................................................................................................................................................................................................................................................... 22 0 7 0.43 3 3 0 0 0 0
.......................................................................................................................................................................................................................................................................TGAAGCAGCAGACGGATGCCCAACTGA............. 27 0 5 0.40 2 1 1 0 0 0
.......................................................................................................................................................................................................................................................................TGAAGCAGCAGACGGATGCCCAACTG.............. 26 0 5 0.40 2 1 1 0 0 0
..............................................................................................................................................................................................................................................ATCCAACAAATTTAGGCTGACAACA........................................ 25 0 5 0.40 2 2 0 0 0 0
TATTGAGCAAGTCTGCTAAAACGGCGA.................................................................................................................................................................................................................................................................................... 27 0 9 0.33 3 0 3 0 0 0
.........................................................................................................................................................................................................................................CATTTATCCAACAAATTTAGGC................................................ 22 0 6 0.33 2 2 0 0 0 0
.............TGCTAAAACGGCGAATATTGGCACGCGC...................................................................................................................................................................................................................................................................... 28 0 7 0.29 2 2 0 0 0 0
.............TGCTAAAACGGCGAATATTGGCAC.......................................................................................................................................................................................................................................................................... 24 0 7 0.29 2 2 0 0 0 0
...........TCTGCTAAAACGGCGAATATTGGCA........................................................................................................................................................................................................................................................................... 25 0 7 0.29 2 1 1 0 0 0
...........TCTGCTAAAACGGCGAATATTGGC............................................................................................................................................................................................................................................................................ 24 0 7 0.29 2 2 0 0 0 0
..........................................................................................ACAAATGTAATTACAGAGCG................................................................................................................................................................................................. 20 0 4 0.25 1 1 0 0 0 0
.........................................................................................TACAAATGTAATTACAGAGCGACGGCA........................................................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0
......................................................................................................ACAGAGCGACGGCAATAAATT.................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................GATGCCCAACTGAAGCTGTTTGAGGT 26 0 4 0.25 1 0 1 0 0 0
..............................................AAAGGTTGCAATTCTTGGCACTCAATG...................................................................................................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0
...............................................................................................TGTAATTACAGAGCGACGGC............................................................................................................................................................................................ 20 0 4 0.25 1 1 0 0 0 0
.................................................................ACTCAATGTGACCAAAGCTGTTG....................................................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................TGCCCAACTGAAGCTGTTTGAG.. 22 0 4 0.25 1 0 1 0 0 0
.................................................................................GCTGTTGTTACAAATGTAATTAC....................................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
..............................TTGGCACGCGCCAGGGAAAGGTTG......................................................................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
.......................GCGAATATTGGCACGCGCCAGGGAA............................................................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
..............................................................................AAAGCTGTTGTTACAAATGTAATT......................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
..................................................GTTGCAATTCTTGGCACTC.......................................................................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0
............................................................................................AAATGTAATTACAGAGCGACGGCAAT......................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
.....................CGGCGAATATTGGCACGCGCCAGG.................................................................................................................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0
.....................................................GCAATTCTTGGCACTCAATGTGACCA................................................................................................................................................................................................................................ 26 0 4 0.25 1 1 0 0 0 0
...........................................................................................CAAATGTAATTACAGAGCGACGGCAA.......................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
.....................................................GCAATTCTTGGCACTCAATGTGA................................................................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
..........................................................................GACCAAAGCTGTTGTTACAAATGTAAT.......................................................................................................................................................................................................... 27 0 4 0.25 1 0 1 0 0 0
.......................GCGAATATTGGCACGCGCCAGGG................................................................................................................................................................................................................................................................. 23 0 4 0.25 1 1 0 0 0 0
.........................................................................TGACCAAAGCTGTTGTTACAAATGTA............................................................................................................................................................................................................ 26 0 4 0.25 1 1 0 0 0 0
.........................................................................................TACTAATGTAATTACAGAGCGACGG............................................................................................................................................................................................. 25 1 4 0.25 1 0 0 1 0 0
...............................................................................................TGTAATTACAGAGCGACGGCAATAAAT..................................................................................................................................................................................... 27 0 4 0.25 1 0 0 1 0 0
....................ACGGCGAATATTGGCACGCGCCAGGG................................................................................................................................................................................................................................................................. 26 0 4 0.25 1 1 0 0 0 0
.............................................................................................AATGTAATTACAGAGCGACGGCA........................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
.....................................................................................................TACAGAGCGACGGCAATAAATTTTTT................................................................................................................................................................................ 26 0 4 0.25 1 1 0 0 0 0
............................................................................................AAATGTAATTACAGAGCGACGGCA........................................................................................................................................................................................... 24 0 4 0.25 1 0 1 0 0 0
TATTGAGCAAGTCTGCTAAAACGG....................................................................................................................................................................................................................................................................................... 24 0 9 0.22 2 1 1 0 0 0
...................................................................................................................................................................................................................................................................................CGGATGCCCAACTGAAGCTGTTTG.... 24 0 5 0.20 1 0 0 1 0 0
......................................CGCCAGGGAAAGGTTGCAATTCTTGG............................................................................................................................................................................................................................................... 26 0 5 0.20 1 0 1 0 0 0
.............................................................................................................................................................................................................................................................................AGCAGACGGATGCCCAACTGA............. 21 0 5 0.20 1 1 0 0 0 0
.................................................................................................................................................................................................................................................CAACAAATTTAGGCTGACAACATGAA.................................... 26 0 5 0.20 1 1 0 0 0 0
.....................................GCGCCAGGGAAAGGTTGCAATTCTTGGC.............................................................................................................................................................................................................................................. 28 0 5 0.20 1 0 0 1 0 0
.................................................................................................................................................................................................................................................................................GACGGATGCCCAACTGAAGCT......... 21 0 5 0.20 1 1 0 0 0 0
................................................................................................................................................................................................................................................................GACAACATGAAGCAGCAGACGGAT....................... 24 0 5 0.20 1 1 0 0 0 0
.........................................CAGGGAAAGGTTGCAATTCT.................................................................................................................................................................................................................................................. 20 0 5 0.20 1 1 0 0 0 0
..................................................................................................................................................................................................................................................AACAAATTTAGGCTGACAACATG...................................... 23 0 5 0.20 1 1 0 0 0 0
..............................................................................................................................................................................................................................................ATCCAACAAATTTAGGCTGACAACT........................................ 25 1 5 0.20 1 1 0 0 0 0
................................................................................................................................................................................................................................................................GACAACATGAAGCAGCAGACGGATG...................... 25 0 5 0.20 1 0 0 0 1 0
..........................................................................................................................................................................................................................................................................AGCAGCAGACGGATGCCCAACTGAAG........... 26 0 5 0.20 1 1 0 0 0 0
..................................................................................................................................................................................................................................................AACAAATTTAGGCTGACAACATGA..................................... 24 0 5 0.20 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................TGACAACATGAAGCAGCAGACGGA........................ 24 0 5 0.20 1 1 0 0 0 0
..........................................AGGGAAAGGTTGCAATTCTTGGC.............................................................................................................................................................................................................................................. 23 0 5 0.20 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................AGCAGACGGATGCCCAACTGAAGCA......... 25 1 5 0.20 1 1 0 0 0 0
...................................................................................................................................................................................................................................................ACAAATTTAGGCTGACAACATGA..................................... 23 0 5 0.20 1 1 0 0 0 0
............................................................................................................................................................................................................................................TTATCCAACAAATTTAGGCTGACAACA........................................ 27 0 5 0.20 1 0 1 0 0 0
..................................................................................................................................................................................................................................................................CAACATGAAGCAGCAGACGGATGCCC................... 26 0 5 0.20 1 0 1 0 0 0
.............................................................................................................................................................................................................................................TATCCAACAAATTTAGGCTGACAACATGA..................................... 29 0 5 0.20 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................CAACATGAAGCAGCAGACGGATG...................... 23 0 5 0.20 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................ACATGAAGCAGCAGACGGATGCCC................... 24 0 5 0.20 1 1 0 0 0 0
.......................................GCCAGGGAAAGGTTGCAATTCTTGG............................................................................................................................................................................................................................................... 25 0 5 0.20 1 0 1 0 0 0
..........................................................................................................................................................................................................................................ATTTATCCAACAAATTTAGGCTGA............................................. 24 0 6 0.17 1 1 0 0 0 0
.................................GCACGCGCCAGGGAAAGGTTG......................................................................................................................................................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................................TGAAGCAGCAGACGGATGCCCAAT................ 24 1 6 0.17 1 0 1 0 0 0
.....................................................................................................................................................................................................................................................................CATGAAGCAGCAGACGGATGCCCAAC................ 26 0 6 0.17 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................CATGAAGCAGCAGACGGATGCCCAT................. 25 1 6 0.17 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................................TGAAGCAGCAGACGGATGCCCAAC................ 24 0 6 0.17 1 0 1 0 0 0
.....................................................................................................................................................TTTTTAAGTTTGTAGTTTAATTAAA................................................................................................................................. 25 1 6 0.17 1 0 1 0 0 0
............................................................................................................................................................................................................................................TTATCCAACAAATTTAGGCTGA............................................. 22 0 6 0.17 1 1 0 0 0 0
.........................................................................................................................................................................................................................................CATTTATCCAACAAATTTAGGCTGACAT.......................................... 28 1 6 0.17 1 1 0 0 0 0
.................................................................................................................................................TTTTTTTTTAAGTTTGTAGTTTAATT.................................................................................................................................... 26 0 6 0.17 1 0 1 0 0 0
.....................................................................................................................................................................................................................................TTTTCATTTATCCAACAAATTTAGGC................................................ 26 0 6 0.17 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................CATGAAGCAGCAGACGGATGCCCAACT............... 27 0 6 0.17 1 0 1 0 0 0
.....................................................................................................................................................................................................................................................................CATGAAGCAGCAGACGGATGC..................... 21 0 6 0.17 1 1 0 0 0 0
......................................................................................................................................................................................................................................TTTCATTTATCCAACAAATTTAGGC................................................ 25 0 6 0.17 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................................TGAAGCAGCAGACGGATGCCC................... 21 0 6 0.17 1 0 1 0 0 0
..............................................................................................................................................................................................................................................ATCCAACAAATTTAGGCTGACA........................................... 22 0 6 0.17 1 1 0 0 0 0
........AAGTCTGCTAAAACGGCGAATATTGG............................................................................................................................................................................................................................................................................. 26 0 7 0.14 1 1 0 0 0 0
....................ACGGCGAATATTGGCACGCG....................................................................................................................................................................................................................................................................... 20 0 7 0.14 1 1 0 0 0 0
............CTGCTAAAACGGCGAATATTGGCA........................................................................................................................................................................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0
...........TCTGCTAAAACGGCGAATATTGGCACGC........................................................................................................................................................................................................................................................................ 28 0 7 0.14 1 1 0 0 0 0
.....AGCAAGTCTGCTAAAACGGCGAATAT................................................................................................................................................................................................................................................................................ 26 0 7 0.14 1 1 0 0 0 0
................TAAAACGGCGAATATTGGCACG......................................................................................................................................................................................................................................................................... 22 0 7 0.14 1 1 0 0 0 0
..........GTCTGCTAAAACGGCGAATATTGGCAC.......................................................................................................................................................................................................................................................................... 27 0 7 0.14 1 1 0 0 0 0
...........TCTGCTAAAACGGCGAATATTGGCAC.......................................................................................................................................................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0
.....AGCAAGTCTGCTAAAACGGCGAAT.................................................................................................................................................................................................................................................................................. 24 0 7 0.14 1 1 0 0 0 0
..........GTCTGCTAAAACGGCGAATATTGG............................................................................................................................................................................................................................................................................. 24 0 7 0.14 1 1 0 0 0 0
.............TGCTAAAACGGCGAATATTGGCACG......................................................................................................................................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0
................TAAAACGGCGAATATTGGCAC.......................................................................................................................................................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0
.................AAAACGGCGAATATTGGCACG......................................................................................................................................................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0
............CTGCTAAAACGGCGAATATTGGC............................................................................................................................................................................................................................................................................ 23 0 7 0.14 1 1 0 0 0 0
................TAAAACGGCGAATATTGGCACGCGC...................................................................................................................................................................................................................................................................... 25 0 7 0.14 1 0 1 0 0 0
................TAAAACGGCGAATATTGG............................................................................................................................................................................................................................................................................. 18 0 7 0.14 1 0 1 0 0 0
...................................................................................................................................................................................................................................................................................CGGATGCACAACTGAAGGT......... 19 2 8 0.13 1 1 0 0 0 0
...TGAGCAAGTCTACTAAAACGGC...................................................................................................................................................................................................................................................................................... 22 1 9 0.11 1 1 0 0 0 0
....GAGCAAGTCTGCTAAAACGGCG..................................................................................................................................................................................................................................................................................... 22 0 9 0.11 1 1 0 0 0 0
.................................................................GCTCAATGTGACCCAAACTG.......................................................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

ATAACTCGTTCAGACGATTTTGCCGCTTATAACCGTGCGCGGTCCCTTTCCAACGTTAAGAACCGTGAGTTACACTGGTTTCGACAACAATGTTTACATTAATGTCTCGCTGCCGTTATTTAAAAAAAGTATAACAAAAACAAAAAAAAAAAAATTCAAACATCAAATTAAATTTTTTACAATGATATAAAAATAAAATTAAAGGAAATGAATTTTAAAAAATGAAAACAAAAGTAAATAGGTTGTTTAAATCCGACTGTTGTACTTCGTCGTCTGCCTACGGGTTGACTTCGACAAACTCCA
*********************************************************************************************************************************************************************************************................((....((((.(((((....))))).))))......))************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
 M020
head
..................................................................GAGTTACACTGGTTTCGACAACAAT.................................................................................................................................................................................................................... 25 0 4 42.25 169 75 94 0 0 0
..............................AACCGTGCGCGGTCCCTTTCCAACGT....................................................................................................................................................................................................................................................... 26 0 4 39.00 156 150 5 1 0 0
...........................................................................................GTTTACATTAATGTCTCGCTGCCGTTAT........................................................................................................................................................................................ 28 0 4 24.75 99 58 25 16 0 0
.................................................................................................................................................................................................................................................................................CTGCCTACGGGTTGACTTCGACAAACT... 27 0 4 20.50 82 72 7 3 0 0
...........................................................................................GTTTACATTAATGTCTCGCTGCCGT........................................................................................................................................................................................... 25 0 4 19.50 78 35 37 6 0 0
............................ATAACCGTGCGCGGTCCCTTTCCAACGT....................................................................................................................................................................................................................................................... 28 0 4 17.25 69 66 2 1 0 0
.........................................................................ACTGGTTTCGACAACAATGTTTACATT........................................................................................................................................................................................................... 27 0 4 15.50 62 40 21 1 0 0
..................................................................GAGTTACACTGGTTTCGACAACAATGT.................................................................................................................................................................................................................. 27 0 4 15.25 61 35 26 0 0 0
.............................................................................................TTACATTAATGTCTCGCTGCCGTTAT........................................................................................................................................................................................ 26 0 4 14.00 56 33 19 4 0 0
.........TCAGACGATTTTGCCGCTTATAACCGT........................................................................................................................................................................................................................................................................... 27 0 7 13.71 96 88 8 0 0 0
........................................GGTCCCTTTCCAACGTTAAGAACCGT............................................................................................................................................................................................................................................. 26 0 5 12.40 62 62 0 0 0 0
............................................................................GGTTTCGACAACAATGTTTACATT........................................................................................................................................................................................................... 24 0 4 11.00 44 40 3 0 1 0
..........................................TCCCTTTCCAACGTTAAGAACCGTGAGT......................................................................................................................................................................................................................................... 28 0 4 9.50 38 15 22 1 0 0
..AACTCGTTCAGACGATTTTGCCGCTT................................................................................................................................................................................................................................................................................... 26 0 9 8.78 79 60 19 0 0 0
...........................................CCCTTTCCAACGTTAAGAACCGTGAGT......................................................................................................................................................................................................................................... 27 0 4 8.50 34 26 8 0 0 0
..........................................................................................................................................................................................ATAAAAATAAAATTAAAGGAAATGAAT.......................................................................................... 27 0 3 7.67 23 5 16 2 0 0
...........................................................................TGGTTTCGACAACAATGTTTACATT........................................................................................................................................................................................................... 25 0 4 6.00 24 20 4 0 0 0
..............................................................................................................................................................................................................................................................................CGTCTGCCTACGGGTTGACTTCGA......... 24 0 5 5.60 28 22 6 0 0 0
.........................................................................ACTGGTTTCGACAACAATGTTTACAT............................................................................................................................................................................................................ 26 0 4 5.50 22 17 5 0 0 0
...............................................................CGTGAGTTACACTGGTTTCGACAACAAT.................................................................................................................................................................................................................... 28 0 4 5.50 22 9 12 1 0 0
..AACTCGTTCAGACGATTTTGCCGCT.................................................................................................................................................................................................................................................................................... 25 0 9 5.44 49 37 12 0 0 0
.............................................................................................TTACATTAATGTCTCGCTGCCGTTATT....................................................................................................................................................................................... 27 0 4 5.25 21 16 3 2 0 0
...............................................................CGTGAGTTACACTGGTTTCGACAACAA..................................................................................................................................................................................................................... 27 0 4 5.00 20 3 16 1 0 0
..AACTCGTTCAGACGATTTTGCCGCTTAT................................................................................................................................................................................................................................................................................. 28 0 7 4.86 34 24 8 1 1 0
............................................................................................................................................................................................................................................................CCGACTGTTGTACTTCGTCGTCTGCCT........................ 27 0 5 4.80 24 24 0 0 0 0
.............................TAACCGTGCGCGGTCCCTTTCCAACGT....................................................................................................................................................................................................................................................... 27 0 4 4.75 19 18 1 0 0 0
..............................................................................................................................................................................................................................................................GACTGTTGTACTTCGTCGTCTGCCT........................ 25 0 5 4.60 23 13 10 0 0 0
..........................................................................CTGGTTTCGACAACAATGTTTACATT........................................................................................................................................................................................................... 26 0 4 4.50 18 16 2 0 0 0
......CGTTCAGACGATTTTGCCGCTTAT................................................................................................................................................................................................................................................................................. 24 0 7 4.29 30 27 2 1 0 0
................................................................................................................................................................................................................................................GGTTGTTTAAATCCGACTGTTGTACT..................................... 26 0 5 4.20 21 5 16 0 0 0
..........................................TCCCTTTCCAACGTTAAGAACCGT............................................................................................................................................................................................................................................. 24 0 5 4.00 20 16 4 0 0 0
..............................................................................................................................................................................................................................................................................CGTCTGCCTACGGGTTGACTTCGAC........ 25 0 5 3.80 19 19 0 0 0 0
.........................................................................................................CTCGCTGCCGTTATTTAAAAAAAGTAT........................................................................................................................................................................... 27 0 4 3.75 15 9 4 1 0 1
....................................GCGCGGTCCCTTTCCAACGTTAAGAAC................................................................................................................................................................................................................................................ 27 0 5 3.60 18 18 0 0 0 0
.................................CGTGCGCGGTCCCTTTCCAACGT....................................................................................................................................................................................................................................................... 23 0 5 3.40 17 17 0 0 0 0
...............................................................................................................................................................................................................................................................................GTCTGCCTACGGGTTGACTTCGA......... 23 0 5 3.40 17 8 8 1 0 0
...............................ACCGTGCGCGGTCCCTTTCCAACGT....................................................................................................................................................................................................................................................... 25 0 4 3.25 13 13 0 0 0 0
.............................................CTTTCCAACGTTAAGAACCGTGAGT......................................................................................................................................................................................................................................... 25 0 4 3.25 13 3 10 0 0 0
.....................................CGCGGTCCCTTTCCAACGTTAAGAAC................................................................................................................................................................................................................................................ 26 0 5 3.20 16 10 5 1 0 0
.......................................................................................................GTCTCGCTGCCGTTATTTAAAAAAAGT............................................................................................................................................................................. 27 0 4 3.00 12 6 5 1 0 0
..................................................................................................................................................................................................................................................................GTTGTACTTCGTCGTCTGCCTACGGGT.................. 27 0 5 2.80 14 14 0 0 0 0
......................................................................TACACTGGTTTCGACAACAATGTTTACAT............................................................................................................................................................................................................ 29 0 4 2.75 11 11 0 0 0 0
...........................TATAACCGTGCGCGGTCCCTTTCCAACGT....................................................................................................................................................................................................................................................... 29 0 4 2.75 11 11 0 0 0 0
...................................................AACGTTAAGAACCGTGAGTTACACT................................................................................................................................................................................................................................... 25 0 4 2.75 11 1 9 0 1 0
.........TCAGACGATTTTGCCGCTTATAAC.............................................................................................................................................................................................................................................................................. 24 0 7 2.71 19 19 0 0 0 0
.............................................................................................................................................................................................................................................................CGACTGTTGTACTTCGTCGTCTGCCT........................ 26 0 5 2.60 13 8 5 0 0 0
................................CCGTGCGCGGTCCCTTTCCAACGT....................................................................................................................................................................................................................................................... 24 0 5 2.60 13 12 1 0 0 0
...............................................................................................................................................................................................................................................................................GTCTGCCTACGGGTTGACTTCGAC........ 24 0 5 2.60 13 3 9 1 0 0
ATAACTCGTTCAGACGATTTTGCCGCT.................................................................................................................................................................................................................................................................................... 27 0 9 2.56 23 19 4 0 0 0
.........................................................................................................CTCGCTGCCGTTATTTAAAAAAAGT............................................................................................................................................................................. 25 0 4 2.50 10 6 4 0 0 0
.................................................CCAACGTTAAGAACCGTGAGTTACACT................................................................................................................................................................................................................................... 27 0 4 2.50 10 4 6 0 0 0
..................................................................GAGTTACACTGGTTTCGACAACAATGTT................................................................................................................................................................................................................. 28 0 4 2.50 10 9 1 0 0 0
...................................................................................................................................................................................................................................................................................GCCTACGGGTTGACTTCGACAAACT... 25 0 4 2.50 10 8 2 0 0 0
........................................................................CACTGGTTTCGACAACAATGTTTACATT........................................................................................................................................................................................................... 28 0 4 2.25 9 9 0 0 0 0
..................................................................GAGTTACACTGGTTTCGACAACAA..................................................................................................................................................................................................................... 24 0 4 2.25 9 5 3 0 1 0
..................................................................................................................................................................................................................................................................................TGCCTACGGGTTGACTTCGACAAACT... 26 0 4 2.25 9 8 0 1 0 0
......................................GCGGTCCCTTTCCAACGTTAAGAAC................................................................................................................................................................................................................................................ 25 0 5 2.00 10 10 0 0 0 0
............................................................................GGTTTCGACAACAATGTTTACATTAA......................................................................................................................................................................................................... 26 0 4 2.00 8 7 1 0 0 0
..............................AACCGTGCGCGGTCCCTTTCCAACGTT...................................................................................................................................................................................................................................................... 27 0 4 2.00 8 8 0 0 0 0
...ACTCGTTCAGACGATTTTGCCGCTTAT................................................................................................................................................................................................................................................................................. 27 0 7 1.86 13 10 3 0 0 0
...............................................................................................................................................................................................................................................AGGTTGTTTAAATCCGACTGTTGT........................................ 24 0 5 1.80 9 3 5 1 0 0
ATAACTCGTTCAGACGATTTTGCCGCTT................................................................................................................................................................................................................................................................................... 28 0 9 1.78 16 15 1 0 0 0
...............................................TTCCAACGTTAAGAACCGTGAGTTACAC.................................................................................................................................................................................................................................... 28 0 4 1.75 7 7 0 0 0 0
................................................TCCAACGTTAAGAACCGTGAGTTACACT................................................................................................................................................................................................................................... 28 0 4 1.75 7 6 1 0 0 0
...........................................................................................................................................................TCAAACATCAAATTAAATTTTTTACAAT........................................................................................................................ 28 0 7 1.71 12 12 0 0 0 0
.......................................................................ACACTGGTTTCGACAACAATGTTTACAT............................................................................................................................................................................................................ 28 0 4 1.50 6 5 1 0 0 0
.................................................................TGAGTTACACTGGTTTCGACAACAAT.................................................................................................................................................................................................................... 26 0 4 1.50 6 4 2 0 0 0
....................................................................GTTACACTGGTTTCGACAACAATGT.................................................................................................................................................................................................................. 25 0 4 1.50 6 6 0 0 0 0
.......................................................................ACACTGGTTTCGACAACAATGTTTACATT........................................................................................................................................................................................................... 29 0 4 1.50 6 6 0 0 0 0
............................................CCTTTCCAACGTTAAGAACCGTGAGT......................................................................................................................................................................................................................................... 26 0 4 1.50 6 2 4 0 0 0
..............................................................................................TACATTAATGTCTCGCTGCCGTTATT....................................................................................................................................................................................... 26 0 4 1.50 6 5 1 0 0 0
...........................................................................................GTTTACATTAATGTCTCGCTGCCGTTA......................................................................................................................................................................................... 27 0 4 1.50 6 6 0 0 0 0
.............................AAACCGTGCGCGGTCCCTTTCCAACGT....................................................................................................................................................................................................................................................... 27 1 4 1.50 6 6 0 0 0 0
............................................................................................TTTACATTAATGTCTCGCTGCCGTTAT........................................................................................................................................................................................ 27 0 4 1.50 6 2 2 1 0 1
..................................................CAACGTTAAGAACCGTGAGTTACACT................................................................................................................................................................................................................................... 26 0 4 1.50 6 1 5 0 0 0
...............................................................................................................................................................................................................................................AGGTTGTTTAAATCCGACTGTTGTACT..................................... 27 0 5 1.40 7 5 1 0 1 0
.............................................................................................................................................................................................................................................................................TCGTCTGCCTACGGGTTGACTTCGA......... 25 0 5 1.40 7 6 1 0 0 0
........................................GGTCCCTTTCCAACGTTAAGAACCG.............................................................................................................................................................................................................................................. 25 0 5 1.40 7 7 0 0 0 0
.......................................................................................................................................................................................................................TAAAAAATGAAAACAAAAGTAAATAGGT............................................................ 28 0 3 1.33 4 4 0 0 0 0
............................................................................................................................................................................................AAAAATAAAATTAAAGGAAATGAAT.......................................................................................... 25 0 3 1.33 4 1 3 0 0 0
.TAACTCGTTCAGACGATTTTGCCGCTT................................................................................................................................................................................................................................................................................... 27 0 9 1.33 12 5 7 0 0 0
.....TCGTTCAGACGATTTTGCCGCTTAT................................................................................................................................................................................................................................................................................. 25 0 7 1.29 9 7 1 0 1 0
.................................................CCAACGTTAAGAACCGTGAGTTACAC.................................................................................................................................................................................................................................... 26 0 4 1.25 5 5 0 0 0 0
...........................................CCCTTTCCAACGTTAAGAACCGTGAGTT........................................................................................................................................................................................................................................ 28 0 4 1.25 5 5 0 0 0 0
...............................................TTCCAACGTTAAGAACCGTGAGTTACACT................................................................................................................................................................................................................................... 29 0 4 1.25 5 5 0 0 0 0
................................................................GTGAGTTACACTGGTTTCGACAACAAT.................................................................................................................................................................................................................... 27 0 4 1.25 5 1 3 1 0 0
............................................................AACCGTGAGTTACACTGGTTTCGACAAC....................................................................................................................................................................................................................... 28 0 4 1.25 5 2 3 0 0 0
...................................................................................................TAATGTCTCGCTGCCGTTATTTAAAA.................................................................................................................................................................................. 26 0 4 1.25 5 4 1 0 0 0
.........................................................................................ATGTTTACATTAATGTCTCGCTGCCGT........................................................................................................................................................................................... 27 0 4 1.25 5 3 2 0 0 0
...................................................................AGTTACACTGGTTTCGACAACAATGT.................................................................................................................................................................................................................. 26 0 4 1.25 5 5 0 0 0 0
........................................................................CACTGGTTTCGACAACAATGTTTACAT............................................................................................................................................................................................................ 27 0 4 1.25 5 4 1 0 0 0
...........................................................................................................................................................................................................................................................................CGTCGTCTGCCTACGGGTTGACTT............ 24 0 5 1.20 6 5 1 0 0 0
..........................................................................................................................................................................................................................................................................TCGTCGTCTGCCTACGGGTTGACTT............ 25 0 5 1.20 6 6 0 0 0 0
.................................................................................................................................................................................................................................................................................CTGCCTACGGGTTGACTTCGACAAAC.... 26 0 5 1.20 6 6 0 0 0 0
.................................................................................................................................................................................................................................................GTTGTTTAAATCCGACTGTTGTACT..................................... 25 0 5 1.20 6 3 2 0 1 0
.........TCAGACGATTTTGCCGCTTATAACCG............................................................................................................................................................................................................................................................................ 26 0 7 1.14 8 8 0 0 0 0
.TAACTCGTTCAGACGATTTTGCCGCT.................................................................................................................................................................................................................................................................................... 26 0 9 1.11 10 6 2 1 1 0
...........................................................................TGGTTTCGACAACAATGTTTACAT............................................................................................................................................................................................................ 24 0 4 1.00 4 4 0 0 0 0
.................................................................................................................................................................................................................................................................TGTTGTACTTCGTCGTCTGCCTAC...................... 24 0 5 1.00 5 4 0 0 0 1
...................................................................................................TAATGTCTCGCTGCCGTTATTTAAA................................................................................................................................................................................... 25 0 4 1.00 4 4 0 0 0 0
...............................................TTCCAACGTTAAGAACCGTGAGTTAC...................................................................................................................................................................................................................................... 26 0 4 1.00 4 3 1 0 0 0
..............................................................................................................................................................................................................................................................................CGTCTGCCTACGGGTTGACTTCGACAA...... 27 0 5 1.00 5 2 3 0 0 0
...........................................CCCTTTCCAACGTTAAGAACCGTGAG.......................................................................................................................................................................................................................................... 26 0 4 1.00 4 4 0 0 0 0
...............................................................................TTCGACAACAATGTTTACATTAAT........................................................................................................................................................................................................ 24 0 4 1.00 4 4 0 0 0 0
....................................GCGCGGTCCCTTTCCAACGTTAAG................................................................................................................................................................................................................................................... 24 0 5 1.00 5 5 0 0 0 0
..................................................................GAGTTACACTGGTTTCGACAACAATG................................................................................................................................................................................................................... 26 0 4 1.00 4 4 0 0 0 0
............................................................................GGTTTCGACAACAATGTTTACAT............................................................................................................................................................................................................ 23 0 4 1.00 4 4 0 0 0 0
................................CCGTGCGCGGTCCCTTTCCAACGTT...................................................................................................................................................................................................................................................... 25 0 5 1.00 5 4 1 0 0 0
.........................................................................................................................................................................................................................................................................TTCGTCGTCTGCCTACGGGTTGACT............. 25 0 5 1.00 5 5 0 0 0 0
.............................................................ACCGTGAGTTACACTGGTTTCGACAAC....................................................................................................................................................................................................................... 27 0 4 1.00 4 1 2 1 0 0
.............................................................ACCGTGAGTTACACTGGTTTCGACAA........................................................................................................................................................................................................................ 26 0 4 1.00 4 0 4 0 0 0
...............................................................................................................................................................................................................................................................ACTGTTGTACTTCGTCGTCTGCCT........................ 24 0 5 1.00 5 3 2 0 0 0
...ACTCGTTCAGACGATTTTGCCGCTT................................................................................................................................................................................................................................................................................... 25 0 9 0.89 8 6 2 0 0 0
..AACTCGTTCAGACGATTTTGCCGC..................................................................................................................................................................................................................................................................................... 24 0 9 0.89 8 8 0 0 0 0
.........................................................................................................................................................................................................................................GTAAATAGGTTGTTTAAATCCGACTGT........................................... 27 0 6 0.83 5 1 4 0 0 0
..........................................................................................................................................................................................................................................................................TCGTCGTCTGCCTACGGGTTGACT............. 24 0 5 0.80 4 4 0 0 0 0
............................................................................................................................................................................................................................................................................GTCGTCTGCCTACGGGTTGACT............. 22 0 5 0.80 4 4 0 0 0 0
.................................CGTGCGCGGTCCCTTTCCAACGTT...................................................................................................................................................................................................................................................... 24 0 5 0.80 4 4 0 0 0 0
.........................................GTCCCTTTCCAACGTTAAGAACCGT............................................................................................................................................................................................................................................. 25 0 5 0.80 4 4 0 0 0 0
...............................................................................................................................................................................................................................................................................GTCTGCCTACGGGTTGACTTCGACAA...... 26 0 5 0.80 4 4 0 0 0 0
....................................................................................................................................................................................................................................................................TGTACTTCGTCGTCTGCCTACGGGT.................. 25 0 5 0.80 4 3 1 0 0 0
........................................................................................AATGTTTACATTAATGTCTCGCTGCCGT........................................................................................................................................................................................... 28 0 4 0.75 3 1 1 1 0 0
..............................AACCGTGCGCGGTCCCTTTCCAACG........................................................................................................................................................................................................................................................ 25 0 4 0.75 3 3 0 0 0 0
...............................................................................TTCGACAACAATGTTTACATTAATGT...................................................................................................................................................................................................... 26 0 4 0.75 3 3 0 0 0 0
...........................................................................................GTTTACATTAATGTCTCGCTGCCGTTATT....................................................................................................................................................................................... 29 0 4 0.75 3 3 0 0 0 0
...................................................................AGTTACACTGGTTTCGACAACAATGTT................................................................................................................................................................................................................. 27 0 4 0.75 3 3 0 0 0 0
....................................................................................................................................................................................................................................................................................CCTACGGGTTGACTTCGACAAACT... 24 0 4 0.75 3 3 0 0 0 0
..............................AACCGTGCGCGGTCCCTTTCCAAC......................................................................................................................................................................................................................................................... 24 0 4 0.75 3 3 0 0 0 0
...........................................................................TGGTTTCGACAACAATGTTTACATTAAT........................................................................................................................................................................................................ 28 0 4 0.75 3 3 0 0 0 0
......................................................................................................TGTCTCGCTGCCGTTATTTAAAAAAAGT............................................................................................................................................................................. 28 0 4 0.75 3 1 1 1 0 0
............................ATAACCGTGCGCGGTCCCTTTCCAACG........................................................................................................................................................................................................................................................ 27 0 4 0.75 3 3 0 0 0 0
...........................................CCCTTTCCAACGTTAAGAACCGT............................................................................................................................................................................................................................................. 23 0 7 0.71 5 5 0 0 0 0
.......................................................................................................................................................................................GATATAAAAATAAAATTAAAGGAAAT.............................................................................................. 26 0 3 0.67 2 2 0 0 0 0
...ACTCGTTCAGACGATTTTGCCGCT.................................................................................................................................................................................................................................................................................... 24 0 9 0.67 6 5 1 0 0 0
...............................................................................................................................................................................................................................GAAAACAAAAGTAAATAGGTTGTTT....................................................... 25 0 6 0.67 4 4 0 0 0 0
..................................GTGCGCGGTCCCTTTCCAACGTTAA.................................................................................................................................................................................................................................................... 25 0 5 0.60 3 2 1 0 0 0
.....................................CGCGGTCCCTTTCCAACGTTAAGAA................................................................................................................................................................................................................................................. 25 0 5 0.60 3 3 0 0 0 0
..............................................................................................................................................................................................................................................................................CGTCTGCCTACGGGTTGACTTCGACA....... 26 0 5 0.60 3 2 1 0 0 0
............................................................................................................................................................................................................................................................................GTCGTCTGCCTACGGGTTGACTTCG.......... 25 0 5 0.60 3 3 0 0 0 0
............................................................................................................................................................................................................................................................................GTCGTCTGCCTACGGGTTGACTTCGA......... 26 0 5 0.60 3 3 0 0 0 0
............................................................................................................................................................................................................................................................................GTCGTCTGCCTACGGGTTGACTT............ 23 0 5 0.60 3 3 0 0 0 0
...................................................................................................................................................................................................................................................TGTTTAAATCCGACTGTTGTACTTCGT................................. 27 0 5 0.60 3 2 1 0 0 0
.................................CGTGCGCGGTCCCTTTCCAACGTTAA.................................................................................................................................................................................................................................................... 26 0 5 0.60 3 3 0 0 0 0
............................................................................................................................................................................................................................................................CCGACTGTTGTACTTCGTCGTCTGCC......................... 26 0 5 0.60 3 3 0 0 0 0
...............................................................................................................................................................................................................................................AGGTTGTTTAAATCCGACTGTTGTAC...................................... 26 0 5 0.60 3 2 1 0 0 0
....................................................................................................................................................................................................................................................GTTTAAATCCGACTGTTGTACTTCGT................................. 26 0 5 0.60 3 3 0 0 0 0
...............................................................................................................................................................ACATCAAATTAAATTTTTTACAATGAT..................................................................................................................... 27 0 7 0.57 4 4 0 0 0 0
...........AGACGATTTTGCCGCTTATAACCGT........................................................................................................................................................................................................................................................................... 25 0 7 0.57 4 3 1 0 0 0
....CTCGTTCAGACGATTTTGCCGCTTAT................................................................................................................................................................................................................................................................................. 26 0 7 0.57 4 3 1 0 0 0
.....................GCCGCTTATAACCGTGCGCGGTCCCT................................................................................................................................................................................................................................................................ 26 0 4 0.50 2 2 0 0 0 0
..........................................TCCCTTTCCAACGTTAAGAACCGTGAG.......................................................................................................................................................................................................................................... 27 0 4 0.50 2 2 0 0 0 0
.....................................................................................................................................................................................................................TTTAAAAAATGAAAACAAAAGTAAAT................................................................ 26 0 4 0.50 2 2 0 0 0 0
............................ATAACCGTGCGCGGTCCCTTTCCAACGTT...................................................................................................................................................................................................................................................... 29 0 4 0.50 2 2 0 0 0 0
...............................................TTCCAACGTTAAGAACCGTGAGT......................................................................................................................................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0
...............................................................................................ACATTAATGTCTCGCTGCCGTTAT........................................................................................................................................................................................ 24 0 4 0.50 2 1 0 1 0 0
....................................................................................................AATGTCTCGCTGCCGTTATTTAAAA.................................................................................................................................................................................. 25 0 4 0.50 2 0 2 0 0 0
.................................................CCAACGTTAAGAACCGTGAGTTAC...................................................................................................................................................................................................................................... 24 0 4 0.50 2 0 2 0 0 0
.............................TAACCGTGCGCGGTCCCTTTCCAACGTT...................................................................................................................................................................................................................................................... 28 0 4 0.50 2 1 1 0 0 0
................................................TCCAACGTTAAGAACCGTGAGTTAC...................................................................................................................................................................................................................................... 25 0 4 0.50 2 2 0 0 0 0
.......................CGCTTATAACCGTGCGCGGTCCCTTT.............................................................................................................................................................................................................................................................. 26 0 4 0.50 2 2 0 0 0 0
...................................................................................................AAATGTCTCGCTGCCGTTAT........................................................................................................................................................................................ 20 1 4 0.50 2 1 0 1 0 0
................................................TCCAACGTTAAGAACCGTGAGTTACAC.................................................................................................................................................................................................................................... 27 0 4 0.50 2 2 0 0 0 0
...........................................................................TGGTTTCGACAACAATGTTTACATTA.......................................................................................................................................................................................................... 26 0 4 0.50 2 2 0 0 0 0
...................................................................................................TAATGTCTCGCTGCCGTTATTTAAAAA................................................................................................................................................................................. 27 0 4 0.50 2 1 1 0 0 0
..................................................................GATTTACACTGGTTTCGACAACAAT.................................................................................................................................................................................................................... 25 1 4 0.50 2 0 2 0 0 0
....................................................ACGTTAAGAACCGTGAGTTACACT................................................................................................................................................................................................................................... 24 0 4 0.50 2 0 2 0 0 0
...................................................................................................TAATGTCTCGCTGCCGTTAT........................................................................................................................................................................................ 20 0 4 0.50 2 1 1 0 0 0
.............................................................................................TTACATTAATGTCTCGCTGCCGTT.......................................................................................................................................................................................... 24 0 4 0.50 2 2 0 0 0 0
..............................................................CCGTGAGTTACACTGGTTTCGACAAC....................................................................................................................................................................................................................... 26 0 4 0.50 2 2 0 0 0 0
..........................................................................................TGTTTACATTAATGTCTCGCTGCCGT........................................................................................................................................................................................... 26 0 4 0.50 2 1 1 0 0 0
...............................................................CGTGAGTTACACTGGTTTCGACAAC....................................................................................................................................................................................................................... 25 0 4 0.50 2 2 0 0 0 0
...................................................................................................TAATGTCTCGCTGCCGTTATTTAA.................................................................................................................................................................................... 24 0 4 0.50 2 0 0 2 0 0
.....................................................CGTTAAGAACCGTGAGTTACACTGGT................................................................................................................................................................................................................................ 26 0 4 0.50 2 1 1 0 0 0
..................................................CAACGTTAAGAACCGTGAGTTACAC.................................................................................................................................................................................................................................... 25 0 4 0.50 2 0 1 1 0 0
....................................................ACGTTAAGAACCGTGAGTTACACTGGT................................................................................................................................................................................................................................ 27 0 4 0.50 2 1 1 0 0 0
............................ATAACCGTGCGCGGTCCCTTTC............................................................................................................................................................................................................................................................. 22 0 4 0.50 2 2 0 0 0 0
.........................................................................................ATGTTTACATTAATGTCTCGCTGCC............................................................................................................................................................................................. 25 0 4 0.50 2 2 0 0 0 0
....................................................................................................AATGTCTCGCTGCCGTTATTTAAA................................................................................................................................................................................... 24 0 4 0.50 2 2 0 0 0 0
.........................................................................................................................................................................................................................................................................................GGGTTGACTTCGACAAACT... 19 0 4 0.50 2 0 2 0 0 0
.........................................................................................................CTCGCTGCCGTTATTTAA.................................................................................................................................................................................... 18 0 4 0.50 2 2 0 0 0 0
...........................................................................TGGTTTCGACAACAATGTTTA............................................................................................................................................................................................................... 21 0 4 0.50 2 2 0 0 0 0
........................................................................CACTGGTTTCGACAACAATGTTTACA............................................................................................................................................................................................................. 26 0 4 0.50 2 2 0 0 0 0
...................................................................................ACAACAATGTTTACATTAATGTCTCGCT................................................................................................................................................................................................ 28 0 4 0.50 2 2 0 0 0 0
....................................................................GTTACACTGGTTTCGACAACAATGTT................................................................................................................................................................................................................. 26 0 4 0.50 2 2 0 0 0 0
...........................................................................TGGTTTCGACAACAATGTTTACATTAA......................................................................................................................................................................................................... 27 0 4 0.50 2 2 0 0 0 0
...........................TATAACCGTGCGCGGTCCCTTTCCA........................................................................................................................................................................................................................................................... 25 0 4 0.50 2 2 0 0 0 0
.......................CGCTTATAACCGTGCGCGGTCCCTT............................................................................................................................................................................................................................................................... 25 0 4 0.50 2 1 1 0 0 0
............................................................................GGTTTCGACAACAATGTTTA............................................................................................................................................................................................................... 20 0 4 0.50 2 2 0 0 0 0
..............................................................................................TACATTAATGTCTCGCTGCCGTTAT........................................................................................................................................................................................ 25 0 4 0.50 2 2 0 0 0 0
.TAACTCGTTCAGACGATTTTGCCGC..................................................................................................................................................................................................................................................................................... 25 0 9 0.44 4 3 1 0 0 0
ATAACTCGTTCAGACGATTTTGCCGC..................................................................................................................................................................................................................................................................................... 26 0 9 0.44 4 3 1 0 0 0
..........CAGACGATTTTGCCGCTTATAACCGT........................................................................................................................................................................................................................................................................... 26 0 7 0.43 3 3 0 0 0 0
....................................................................................................................................................................................................................................................GTTTAAATCCGACTGTTGTACTT.................................... 23 0 5 0.40 2 2 0 0 0 0
....................................GCGCGGTCCCTTTCCAACGTTAAGAA................................................................................................................................................................................................................................................. 26 0 5 0.40 2 1 1 0 0 0
.............................................................................................................................................................................................................................................ATAGGTTGTTTAAATCCGACTGTTGT........................................ 26 0 5 0.40 2 0 2 0 0 0
..........................................TCCCTTTCCAACGTTAAGAACCGTG............................................................................................................................................................................................................................................ 25 0 5 0.40 2 2 0 0 0 0
.......................................................................................................................................................................................................................................................................ACTTCGTCGTCTGCCTACGGGTTGACTT............ 28 0 5 0.40 2 2 0 0 0 0
.................................CGTGCGCGGTCCCTTTCCAACGTTAAG................................................................................................................................................................................................................................................... 27 0 5 0.40 2 1 1 0 0 0
................................................................................................................................................................................................................................................GGTTGTTTAAATCCGACTGTTGTACTT.................................... 27 0 5 0.40 2 0 1 0 1 0
......................................................................................................................................................................................................................................................TTAAATCCGACTGTTGTACTTCGT................................. 24 0 5 0.40 2 2 0 0 0 0
.........................................................................................................................................................................................................................................................................GTCGTCGTCTGCCTACGGGTTGACTT............ 26 1 5 0.40 2 2 0 0 0 0
........................................................................................................................................................................................................................................................................GTTCGTCGTCTGCCTACGGGTTGACTT............ 27 1 5 0.40 2 2 0 0 0 0
.................................................................................................................................................................................................................................................................................CTGCCTACGGGTTGACTTCGACAA...... 24 0 5 0.40 2 1 1 0 0 0
...................................................................................................................................................................................................................................................TGTTTAAATCCGACTGTTGTACT..................................... 23 0 5 0.40 2 1 1 0 0 0
...............................................................................................................................................................................................................................................................................GTCTGCCTACGGGTTGACTTCGACAAA..... 27 0 5 0.40 2 1 0 1 0 0
..................................................................................................................................................................................................................................................................GTTGTACTTCGTCGTCTGCCT........................ 21 0 5 0.40 2 2 0 0 0 0
...................................TGCGCGGTCCCTTTCCAACGTTAAGAAC................................................................................................................................................................................................................................................ 28 0 5 0.40 2 2 0 0 0 0
.....................................CGCGGTCCCTTTCCAACGTTAAGAACCGT............................................................................................................................................................................................................................................. 29 0 5 0.40 2 2 0 0 0 0
.................................................................................................................................................................................................................................................................................CTGCCTACGGGTTGACTTCGACAAA..... 25 0 5 0.40 2 1 1 0 0 0
......................................GCGGTCCCTTTCCAACGTTAAGAA................................................................................................................................................................................................................................................. 24 0 5 0.40 2 2 0 0 0 0
.................................................................................................................................................................................................................................................................TGTTGTACTTCGTCGTCTGCCTACGGGT.................. 28 0 5 0.40 2 2 0 0 0 0
...........................................................................................................................................................................................................................................................................CGTCGTCTGCCTACGGGTTGACTTCGA......... 27 0 5 0.40 2 2 0 0 0 0
................................................................................................................................................................................................................................................GGTTGTTTAAATCCGACTGTTGTAC...................................... 25 0 5 0.40 2 2 0 0 0 0
.........................................................................................................................................................................................................................................................................TTCGTCGTCTGCCTACGGGTTGACTT............ 26 0 5 0.40 2 2 0 0 0 0
........................................GGTCCCTTTCCAACGTTAAGAAC................................................................................................................................................................................................................................................ 23 0 5 0.40 2 2 0 0 0 0
................................................................................................................................................................................................................................................................................TCTGCCTACGGGTTGACTTCGA......... 22 0 5 0.40 2 2 0 0 0 0
...........................................................................................................................................................................................................................................................................CGTCGTCTGCCTACGGGTTGACT............. 23 0 5 0.40 2 2 0 0 0 0
.................................................................................................................................................................................................................................................................................CTGCCTACGGGTTGACTTCGA......... 21 0 5 0.40 2 1 1 0 0 0
....................................GCGCGGTCCCTTTCCAACGT....................................................................................................................................................................................................................................................... 20 0 5 0.40 2 2 0 0 0 0
........................................................................................................................................................................................................................AAAAAATGAAAACAAAAGTAAATAGGT............................................................ 27 0 3 0.33 1 1 0 0 0 0
.........................................................................................................................................................................................................................AAAAATGAAAACAAAAGTAAATAGGA............................................................ 26 1 3 0.33 1 1 0 0 0 0
.........................................................................................................................................................................................................................AAAAATGAAAACAAAAGTAAATAGGT............................................................ 26 0 3 0.33 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................GTACTTCGTCGTCTGCCTACGGGT.................. 24 0 6 0.33 2 2 0 0 0 0
........................................................................................................................................................................................................................................AGTAAATAGGTTGTTTAAATCCGACTGT........................................... 28 0 6 0.33 2 2 0 0 0 0
...........................................................................................................................................................................................................................................AAATAGGTTGTTTAAATCCGACTGT........................................... 25 0 6 0.33 2 1 1 0 0 0
..........................................................................................................................................................................................ATAAAAATAAAATTAAAGGAAATGAATT......................................................................................... 28 0 3 0.33 1 0 1 0 0 0
.........TCAGACGATTTTGCCGCTTAT................................................................................................................................................................................................................................................................................. 21 0 9 0.33 3 2 0 0 0 1
............................................................................................................................................................................................AAAAATAAAATTAAAGGAAATGAATT......................................................................................... 26 0 3 0.33 1 1 0 0 0 0
..........................................................................................................................................................................................ATAAAAATAAAATTAAAGGAAATGAA........................................................................................... 26 0 3 0.33 1 1 0 0 0 0
..........................................................................................................................................................................................ATAAAAATAAAATTAAAGGAAAAGAAT.......................................................................................... 27 1 3 0.33 1 0 1 0 0 0
........TTCAGACGATTTTGCCGCTTATAAC.............................................................................................................................................................................................................................................................................. 25 0 7 0.29 2 1 0 1 0 0
......CGTTCAGACGATTTTGCCGCTTA.................................................................................................................................................................................................................................................................................. 23 0 7 0.29 2 2 0 0 0 0
..AACTCGTTCAGACGATTTTGCCGCTTA.................................................................................................................................................................................................................................................................................. 27 0 7 0.29 2 2 0 0 0 0
.......GTTCAGACGATTTTGCCGCTTATAAC.............................................................................................................................................................................................................................................................................. 26 0 7 0.29 2 1 1 0 0 0
.......GTTCAGACGATTTTGCCGCTTAT................................................................................................................................................................................................................................................................................. 23 0 7 0.29 2 2 0 0 0 0
..............................................ATGCCAACGTTAAGAACCGTGAGTTAC...................................................................................................................................................................................................................................... 27 2 4 0.25 1 0 1 0 0 0
..............................................................CCGTGAGTTACACTGGTTT.............................................................................................................................................................................................................................. 19 0 4 0.25 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................................CTGCCTACGGGTCGACTTCGACAAACT... 27 1 4 0.25 1 1 0 0 0 0
........................................................................CACTGGTTTCGACAACAATGTTTA............................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
.............................................CTTTCCAACGTTAAGAACCGTGAG.......................................................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
............................................................................................TTTACATTAATGTCTCGCTGCCGTTATTT...................................................................................................................................................................................... 29 0 4 0.25 1 0 0 1 0 0
..............................AACCGTGCGCGGTCCCTTTC............................................................................................................................................................................................................................................................. 20 0 4 0.25 1 1 0 0 0 0
.......................................................................................................GTCTCGCTGCCGTTATTTAAAAAAAGTAT........................................................................................................................................................................... 29 0 4 0.25 1 1 0 0 0 0
.................................................CCAACGTTAAGAACCGTGAGTTACA..................................................................................................................................................................................................................................... 25 0 4 0.25 1 0 1 0 0 0
............................................................AACCGTGAGTTACACTGGTTTCGACAA........................................................................................................................................................................................................................ 27 0 4 0.25 1 0 1 0 0 0
..................................................................GAGTTACACTGGTGTCGACAACAAT.................................................................................................................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0
..................................................................GAGTTACACTGGTCTCGACAACAAT.................................................................................................................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0
................................................................................................................................................................................................................................................................................TCTGCCTACGGGTTGACTTCGACAAACT... 28 0 4 0.25 1 0 1 0 0 0
................................................................GTGAGTTACACTGGTTTCGACAACA...................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
..............................................TTTCCAACGTTAAGAACCGTGAGTT........................................................................................................................................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0
...........................................................................................GTTTACATTAATGTCTCGCTGCCTT........................................................................................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0
.............................ATACCGTGCGCGGTCCCTTTCCAACGT....................................................................................................................................................................................................................................................... 27 2 4 0.25 1 1 0 0 0 0
...............................................................................................................................................................ACATCAAATTAAATTTTT.............................................................................................................................. 18 0 8 0.25 2 2 0 0 0 0
........................................GGTCCCTTTCCAACGTTAAGAACCGTGAT.......................................................................................................................................................................................................................................... 29 1 4 0.25 1 1 0 0 0 0
...................................................................................................TCATGTCTCGCTGCCGTTATTTAAA................................................................................................................................................................................... 25 1 4 0.25 1 0 0 0 0 1
........................................................................................................................................................................................................................................................................................CGGGTTGACTTCGACAAACT... 20 0 4 0.25 1 0 1 0 0 0
...............................................TTCCAACGTTAAGAACCGTGAGTT........................................................................................................................................................................................................................................ 24 0 4 0.25 1 0 1 0 0 0
...............................................................CTTGAGTTACACTGGTTTCGACAAC....................................................................................................................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0
......................................................................TACACTGGTTTCGACAACAATGT.................................................................................................................................................................................................................. 23 0 4 0.25 1 1 0 0 0 0
.............................TAACCGTGCGCGGTCCTTTTCCAACGT....................................................................................................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0
..............................................................CCGTGAGTTACACTGGTTTCGACAACA...................................................................................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0
.........................................................................ACTGGTTTCGACAACAATGTT................................................................................................................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0
............................................................................GGTTTCGACGACAATGTTTACATT........................................................................................................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0
...........................................CCCTTTCCAACGTTAAGAACCGTGAGTC........................................................................................................................................................................................................................................ 28 1 4 0.25 1 1 0 0 0 0
.....................................................................................AACAATGTTTACATTAATGTCTCGCTG............................................................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0
.........................................................................................................GTCGCTGCCGTTATTTAAAAAAAGTAT........................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0
..............................................TTTCCAACGTTAAGAACCGTGAGTTAC...................................................................................................................................................................................................................................... 27 0 4 0.25 1 0 1 0 0 0
...............................................................................................ACATTAATGTCTCGCTGCCGT........................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0
................................................TCCAACGTTAAGAACCGTGAGTT........................................................................................................................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0
...............................................GTCCAACGTTAAGAACCGTGAGTTACACT................................................................................................................................................................................................................................... 29 1 4 0.25 1 1 0 0 0 0
..............................AACCGTGCGCGGTCCCCTTCCAACGT....................................................................................................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0
...............................................................................................ACATTAATGTCTCGCTGCCGTTATT....................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
...........................................................................................GTTTCCATTAATGTCTCGCTGCCGTTAT........................................................................................................................................................................................ 28 1 4 0.25 1 0 1 0 0 0
............................................................................GGTTTCGACAACAATCTTTACATT........................................................................................................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0
.......................................................................................................GTCTCGCTGCCGTTATTTAAAAAAA............................................................................................................................................................................... 25 0 4 0.25 1 0 1 0 0 0
.............................AAACCGTGCGCGGTCCCTTTCCAA.......................................................................................................................................................................................................................................................... 24 1 4 0.25 1 1 0 0 0 0
.............................................................................GTTTCGACAACAATGTTTACATT........................................................................................................................................................................................................... 23 0 4 0.25 1 0 1 0 0 0
.............................AAACCGTGCGCGGTCCCTTT.............................................................................................................................................................................................................................................................. 20 1 4 0.25 1 1 0 0 0 0
.........................................................................ACTGGTTTCGACAACAATGTTTA............................................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
...........................................TCCTTTCCAACGTTAAGAACCGTGAGT......................................................................................................................................................................................................................................... 27 1 4 0.25 1 0 1 0 0 0
...........................................CCCTTTCCAACGTTAGGAACCGTGAGT......................................................................................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0
.................................................CCAACGTTAAGAACCGTGAGTTACACTC.................................................................................................................................................................................................................................. 28 1 4 0.25 1 0 1 0 0 0
............................ATAACCGTGCGCGGTCCCTTTCCAA.......................................................................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
.....................GCCGCTTATAACCTTGCGCGGTCCCT................................................................................................................................................................................................................................................................ 26 1 4 0.25 1 1 0 0 0 0
....................TGCCGCTTATAACCGTGCGCGGTCCCT................................................................................................................................................................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0
.....................GCCCCTTATAACCGTGCGCGGTCCCT................................................................................................................................................................................................................................................................ 26 1 4 0.25 1 1 0 0 0 0
..................................................................................................................................ATAACAAAAACAAAAAAAAAAAAAT.................................................................................................................................................... 25 0 4 0.25 1 0 1 0 0 0
.............................TAACCGTGCGCGGTCACTTTCCAACGT....................................................................................................................................................................................................................................................... 27 1 4 0.25 1 0 1 0 0 0
...........................................................................................GTTTGCATTAATGTCTCGCTGCCGT........................................................................................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0
.................................................................................................................................................................................................................................................................................CTGCCTACGGGTTGACTTCGACAAACTCC. 29 0 4 0.25 1 1 0 0 0 0
.......................CGCTTATAACCGTGCGCGGTCCCT................................................................................................................................................................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0
.........................................TTCCCTTTCCAACGTTAAGAACCGTGAGT......................................................................................................................................................................................................................................... 29 1 4 0.25 1 1 0 0 0 0
..........................................................................CTGGTTTCGACAACAATGTTTACAT............................................................................................................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0
......................................................................TACACTGGTTTCGACAACAAT.................................................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0
.......................................................................ACACTGGTTTCGACAACAAT.................................................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0
.......................................................................................CAATGTTTACATTAATGTCTCGCTGCCG............................................................................................................................................................................................ 28 0 4 0.25 1 1 0 0 0 0
..........................................................................................................TCGCTGCCGTTATTTAAAAAAAGTAT........................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
............................................CCTTTCCAACGTTAAGAACCGTGAGTT........................................................................................................................................................................................................................................ 27 0 4 0.25 1 0 1 0 0 0
...........................................CCCTTTTCAACGTTAAGAACCGTGAGT......................................................................................................................................................................................................................................... 27 1 4 0.25 1 0 1 0 0 0
..................................................................GAGTTACACTGGTTTCGACA......................................................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0
..................................................................................................AGAATGTCTCGCTGCCGTTATTTAAAAA................................................................................................................................................................................. 28 2 4 0.25 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004954:5066227-5066529 + dwi_3790 TATTGAGCAAGTCTGCTAAAACGGCGAATATTGGCACGCGCCAGGGAAAGGTTGCAATTCTTGGCA--CTCAATGTGACCAAAGCTGTTGTTACAAATGTAA-TTACAGAGCGACGGCAATAAATTTTTTTCATA---T--------------------------------------------------------------------TG-TT-TT---------------------TGTTTTTTTTTTTTT--------------A---------AGTTTGTAGTTTA-----ATTTAAAAAATGTTA------CTATATTTT----TATTTTAATTTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACTTAAAATTTTTTACTTTTGTTTTCATTTATCCAACAAATTTA-------------GGCTGACAACATGAAGCAGCAGACG----------GATGCCCAA----------------------------------------------------CTGAAG-----------------------------------------------------CTGTTTGAGGT
droVir3 scaffold_12970:4768521-4768718 - TTAATATT-T-----------------------------------------T-----------------------------------------------------------------------------TT---AAATATTTTGTTTTGTAATA-------------------CCAAA--------------------------------------------------------------------------------------------AGT------------CTA-----ATCTATGGAATTTTC------TTCGATTTT----TTTTGTCCTTTCCAGCTGTTAAGGCAGCGAGTGAATTTCGTTAATCCAACCAACGTTTGGGCAAATCAGACA---------------------------------------------------------------------------------------------------------------------------------------------AAATTGTTCGCCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAAG-------TGCAAGCTC--------ACGCT--------------------CAAGGACA----------------T--CTGGAG-----------------------------------------------------CAGTTT--GAG
droMoj3 scaffold_6540:15870712-15870901 - ATAATTTT-A-----------------------------------------T-----------------------------------------------------------------------------TTCCTC---A--------------------------------------------------------------------TA-TT-TT---------------------TGTTTTTTTTTTTTTTTTTTTT------------TTT--------CA----ATTTCT---------------GATATTCCATATTTA----T-------------------------------------------------------------------------------------------ACAGCTTCAACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------C-GCTCAAATCTGGACTTGTCATTGGTGCTAAAATA---------------------------------------------------------------TAGCCAATTAAAATTTTTAGCTATTGC----------------------------------------------------------------------------------------TGACAAAAGTTATGTCCGAAGGCG----------------TTGCTGAAT-----------------------------------------------------CGATTCGAGAA
droGri2 scaffold_15110:14097753-14097894 - ATTTTATT-G-----------------------------------------T-----------------------------------------------------------------------------TG---T------------------------------------------------------------------------TTTTTT-TTT---------------------------TTTTA--------------ATATTGC---------TG---------------------------TT-------------------------------------------------------------------------------------GTTG-------------------------------------------TAAGTGTCATTATTGTTTGCTTTCTTAGTTGCTGTCGGTTTTTTTTTTTTTTTGTTGTTTATTTTTGCTGTAACCTTAGAACTTCTCAAGTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGC
dp5 XL_group1a:5790939-5791052 - TTTTATTC-T-----------------------------------------T-----------------------------------------------------------------------------CTATTTTTTA------------------TTTATTTTTTTTTTATTATTATTTTTCTTTTATTATTATTAATTTTTTGTTT-----------------------------------------------------------------------------------------------------------------------ATTTTAATTT------------------------------------------------------------------TTTTTTTTGTTTTATGTTATT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATTTA
droPer2 scaffold_63:154440-154580 + ATTAATTT-T-----------------------------------------T-----------------------------------------------------------------------------TG---T------------------------------------------------------------------------TTATTT-TAA-------------------TTTTTTTGTTTTT--------------TTTT---TTTTACTT------------------------------------T----------------------------------------------------------------------------------TG----TATG---------TATGTTATT-TTATTTATTTAAATCAAAATGCATTTTAACTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTCATTTAAATATGTTCAGTCTTTAATTTGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAATAAA
droAna3 scaffold_13340:21844032-21844194 + TTGTTTCG-T-----------------------------------------G-----------------------------------------------------------------------------TT---TCTTTCCTCTTTTCGTTTTCTCG----TT--------TCTCTGT--------------------------------------------------------------------------------------------TCT--------CT----GTTCTC---------------TATACTCTATGTTTC----TGTTCTGGTTTCC-------------TACTTTGAATCTTCT-------------------------CGA------------------------------------------ATC-GATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------TT-----------------GTCTGTCCCCCGTGAGGTT--------------TCTAGTCGATGGCCAC----TGTAA-----------------------------------------------------TTGTAAACAAC
droBip1 scf7180000396427:48400-48597 - TAACTTTT-T-----------------------------------------A-----------------------------------------------------------------------------TT---ATTTA---------------------------------------------------------------------T-TT-TG---------------------TGTTTGTTTATGT--------------TTAT------------------------CT---------------TGGCTTT----------------------------------------------------------------------------------TG----TAAT---------TATGTACCTCCAATGTTGTTGAACTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTTATTGGTTTTTAATTA--------------------------------------------------------------------AATTTAAATTTGTGATTTTTTTTTATTCTTTTCTACCAAAACCACCACCCAAAACCAAA-------------CCAACCCACA----------CATGCTTAC----------------------------------------------------CAACCG-----------------------------------------------------CCCCTCAGCGT
droKik1 scf7180000302517:713652-713825 + TTTTTCTT-T-----------------------------------------T-----------------------------------------------------------------------------AT---T------------------------------------------------------------------------TTTCTT-GTATTTTTTTCTTGCAT-----------------TTT--------------T---------TTCTTGTATTTTT-----CTCTAG-ATTTTTTC------TTAGACTTT----TTTCTTAGTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCCTAAACTTTT-----TTCTTATATTT----------TT---------ACTACTTAGCATGCATCGCA-------------------G-GCAGTCATT----------------------------------------------------------------------------------------------------------------------------------------------------------GA--------------------C-----------------GTCTG----------------------------------------CAAC----AGAAC-----------------------------------------------------ACGTAGGCAAG
droFic1 scf7180000453850:253668-253880 + TGTAGTTT-T-----------------------------------------TAGCAATTTTTGTTTGGTTGGATGTTCTTGTTGCCGTTGTTATTGTTGGTTTACACAGAGCGGTTGC--------TGTTGTTGT---T-------------------------------------TGTTTG--------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTCTTGTTT--------------------------------------------CTTGTTGGTTGTTTAATTTAAATTAAATTAATTACTAAAATT-ATTTTATA-ACAAATATCACTACAATAGTTTGCATTTTTTTGTTGTTTGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTG-----------------------TATCGTTTATC
droEle1 scf7180000491011:1681150-1681339 - ATAGAATT-T-----------------------------------------T-----------------------------------------------------------------------------ACAATATTGTTTTTTTTTAATTATGTTG----TA--------TGCCTAA--------------------------------------------------------------------------------------------TTT------------TTA-----TTTTAAAAAAATGTC------TACAATTTCTTTTAATTTTAAGGACT-------------TGTTTACCATTTTCT-------------------------AGA------------------------------------------GA----------------------------------------------------------------------------------------------------------------------------------ACATTCCACGACA-TCGCCGGCACTG-GCAGTCATCTGGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACGCTTCCCAATCTGAGGAAAACGCTAGAGGA
droRho1 scf7180000779902:100905-101055 - TTTTGCTT-T-----------------------------------------CTTAAAAATATACTTGATATGAAAT-----------------------------------------------------TT---T---------------------------A--------GGACACA-----TTTTTATTAAAAACAAATCATAGAAT--------------------------------------TTTTGAATTTTTTTTCTGTGCGG---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-GCTTAACA-GCATAGGG-------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAACAG----------CAATATCAG----------------------------------------------------TAGCAG-----------------------------------------------------CAGCGTGAGGC
droBia1 scf7180000301506:403841-403940 - TTTTTTTA-A-----------------------------------------T-----------------------------------------------------------------------------AA----------------------------------------------------------------------------TG-CG---------------------------------------------------------------------------------------------------------------------------------------------TATAGTAAATCTTTT-------------------------TTA------------------------AG-----------------GC-CTTAG---------------------------------------------------------AT-----------------------------------------TGACTAAAA------------------------------------------------------------------------------------------------------------------------CCCGTTAATTTTTAATCATCTTTACTTAAAATATTCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATT
droTak1 scf7180000415138:324319-324541 + CGAAGGTA-A-----------------------------------------T-----------------------------------------------------------------------------TTATTTTATT------------------TTTATTATTGTTACTTAATTATATGTTT----------------------------------------------------------------------------------------------------------CT---------------AAACTTGATTATTTA----T---ATAATTTCACGTGCACAATGCAGACAGAAAATCTC----------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTTTATTGGTTTATGATTGAATTTAAATTTTGTAACTTTACTTTTCTTTTTCACCACCCACCAACCC-----------------------------------------------------------------------------GCTTAACCACCAACCATCGTAATCG----------C--------AACCG--------------------CA----------------------A--TGAGCA-----------------------------------------------------GCCTTTGTGGT
droEug1 scf7180000409804:535185-535273 - ATTGATTT-T-----------------------------------------A-----------------------------------------------------------------------------TT---CTT-------------------------------------------------------------------------GTT-TTATTAAGATTTTAGATTAAAT--------------------------------AC---------------------TT---------------GA--------------------------------------------------------------------------------------------------------------------------------AATTCAATATATT--------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------ATCAATTTT-----------------------------------------------------------------------------TAAAGTGT------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTTTTG
dm3 chr2R:16251911-16252044 + ATTTTATT-T-----------------------------------------A-----------------------------------------------------------------------------TA---T------------------------------------------------------------------------CA-TT-TT---------------------TGTTTCTTTTTTA--------------GTGACTT---------CA---------------------------CA-------------------------------------------------------------------------------------GTTG-------------------------------------------AAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCAACTTCAATCAAT-------TACATA-----------------------------T--------------TATTATGAGAAACCAC----TATAATAATAGAAATATTTTTCTTTATTCTTTT--------------------------TAATAAAACA
droSim2 x:13278717-13278903 - TATTTTTA-T-----------------------------------------A-----------------------TATGTTTTACCAATTTTATTGATATTTAACAGATACATATATT--------TATTTCCAT---A-------------------------------------TATTTTT---------------------------CTT-TCCTTAAATTTCTAAATTATAT--------------------------------------------------------------------------------------------ATTTTACT--------------------------------------------------------------------------------------------------------TTTATTATTCA--------------------TT-------------------------------------CGTAATCTTATATTTCTTCAGGTTTAAACGAGGCTTATTGCCTG-------------------------------------GGCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------------C----------AGA--------------------------------A--TTGTGA------------------------------------------------------CATTTTGCGG
droSec2 scaffold_2:3630705-3630852 + ATTTAAATAA-----------------------------------------A------------TTGTTATTTTAT-----------------------------------------------------TT---TCGTATTTTATTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------------------ATTGCTAACATATTTTCTCTCCGTGCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTCTTT---------------------------------------------------------------------------GCCAGTCCCCGGAACTGGACTATCGGCACGAGCTGATGGG--TC-----------------GTCTG----------------------------------------CATA----AAATC--------------------------------------------------GAGCCCGCCGATGT
droYak3 3L:4670042-4670158 - GATCAACA-G-----------------------------------------C-----------------------------------------------------------------------------AAAAGTG--TTCCTTATTTGGCATATTG----TT--------T------------------------------------------T---------------------CGGTATTTTATTTTT--------------G---------GGCTTACCATTTA---------------------------GTGA------------------------------------------------------------------------ATCATATAAATATATGTATGTCGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA--------------------------------T--TTATGA------------------------------------------------------TA-CTCAAAA
droEre2 scaffold_4845:16099609-16099690 + TTTCATTT-T-----------------------------------------G-----------------------------------------------------------------------------TT---T-------------------------------------------------------------------------------T---------------------CGTTTTTTTTTTTTTGTTTTTTTTTTGGATGTGC---------------------TT---------------GA--------------------------------------------------------------------------------------------------------------------------------GTTGCAATAGTTTTGTTTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCCTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TATTGAGCAAGTCTGCTAAAACGGCGAATATTGGCACGCGCCAGGGAAAGGTTGCAATTCTTGGCA--CTCAATGTGACCAAAGCTGTTGTTACAAATGTAA-TTACAGAGCGACGGCAATAAATTTTTTTCATA---T--------------------------------------------------------------------TG-TT-TT---------------------TGTTTTTTTTTTTTT--------------A---------AGTTTGTAGTTTA-----ATTTAAAAAATGTTA------CTATATTTT----TATTTTAATTTCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACTTAAAATTTTTTACTTTTGTTTTCATTTATCCAACAAATTTA-------------GGCTGACAACATGAAGCAGCAGACG----------GATGCCCAA----------------------------------------------------CTGAAG-----------------------------------------------------CTGTTTGAGGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................ACAAATGTAA-TTACAGAGCGACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2444.7519019000
..............................................AAAGGTTGCAATTCTTGGCA--CTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2441.50606000
............................................................................................ACAAATGTAA-TTACAGAGCGACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2641.25501040
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTATCCAACAAATTTA-------------GGCTGA................................................................................................................................................................2561.17716000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACG----------GATGCCCAA----------------------------------------------------CTGAAG-----------------------------------------------------...........2351.00504010
............................................................................................ACAAATGTAA-TTACAGAGCGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2341.00404000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTATCCAACAAATTTA-------------GGCTG.................................................................................................................................................................2460.83505000
............................................................................................ACAAATGTAA-TTACAGAGCGACGGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.75302010
...........TCTGCTAAAACGGCGAATATTGGCACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.71505000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACG----------GATGCCCAA----------------------------------------------------CTGAAG-----------------------------------------------------C..........2450.60303000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTATCCAACAAATTTA-------------GGCTGACA..............................................................................................................................................................2760.50303000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTATCCAACAAATTTA-------------GGCT..................................................................................................................................................................2360.50302010
..............................................AAAGGTTGCAATTCTTGGCA--CT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.50202000
..............................................AAAGGTTGCAATTCTTGGCA--CTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.50202000
...........................................................................................TACAAATGTAA-TTACAGAGCGACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.50202000
...........................................................................TGACCAAAGCTGTTGTTACAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.50201010
............................................................TTGGCA--CTCAATGTGACCAAAGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.50202000
............................................................................................ACAAATGTAA-TTACAGAGCGACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.50202000
..................AAACGGCGAATATTGGCACGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.43303000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCAGCAGACG----------GATGCCCAA----------------------------------------------------CTGA..................................................................2750.40201010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCAGCAGACG----------GATGCCCAA----------------------------------------------------CTG...................................................................2650.40201010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAACAAATTTA-------------GGCTGACAACA...........................................................................................................................................................2550.40202000
TATTGAGCAAGTCTGCTAAAACGGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.33300030
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTATCCAACAAATTTA-------------GGC...................................................................................................................................................................2260.33202000
.............TGCTAAAACGGCGAATATTGGCACGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.29202000
.............TGCTAAAACGGCGAATATTGGCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.29202000
...........TCTGCTAAAACGGCGAATATTGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.29201010
...........TCTGCTAAAACGGCGAATATTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.29202000
............................................................................................ACAAATGTAA-TTACAGAGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.25101000
...........................................................................................TACAAATGTAA-TTACAGAGCGACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25101000
.........................................................................................................ACAGAGCGACGGCAATAAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCCCAA----------------------------------------------------CTGAAG-----------------------------------------------------CTGTTTGAGGT2640.25100010
..............................................AAAGGTTGCAATTCTTGGCA--CTCAATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25101000
.................................................................................................TGTAA-TTACAGAGCGACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.25101000
.................................................................A--CTCAATGTGACCAAAGCTGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAA----------------------------------------------------CTGAAG-----------------------------------------------------CTGTTTGAG..2240.25100010
...................................................................................GCTGTTGTTACAAATGTAA-TTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25101000
..............................TTGGCACGCGCCAGGGAAAGGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25101000
.......................GCGAATATTGGCACGCGCCAGGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25101000
................................................................................AAAGCTGTTGTTACAAATGTAA-TT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25101000
..................................................GTTGCAATTCTTGGCA--CTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.25101000
..............................................................................................AAATGTAA-TTACAGAGCGACGGCAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000
.....................CGGCGAATATTGGCACGCGCCAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25101000
.....................................................GCAATTCTTGGCA--CTCAATGTGACCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000
.............................................................................................CAAATGTAA-TTACAGAGCGACGGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000
.....................................................GCAATTCTTGGCA--CTCAATGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25101000
............................................................................GACCAAAGCTGTTGTTACAAATGTAA-T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25100010
.......................GCGAATATTGGCACGCGCCAGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25101000
...........................................................................TGACCAAAGCTGTTGTTACAAATGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000
.................................................................................................TGTAA-TTACAGAGCGACGGCAATAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25100100
....................ACGGCGAATATTGGCACGCGCCAGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000
...............................................................................................AATGTAA-TTACAGAGCGACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25101000
........................................................................................................TACAGAGCGACGGCAATAAATTTTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25101000
..............................................................................................AAATGTAA-TTACAGAGCGACGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25100010
TATTGAGCAAGTCTGCTAAAACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.22201010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG----------GATGCCCAA----------------------------------------------------CTGAAG-----------------------------------------------------CTGTTTG....2450.20100100
......................................CGCCAGGGAAAGGTTGCAATTCTTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.20100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACG----------GATGCCCAA----------------------------------------------------CTGA..................................................................2150.20101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAATTTA-------------GGCTGACAACATGAA.......................................................................................................................................................2650.20101000
.....................................GCGCCAGGGAAAGGTTGCAATTCTTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.20100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACG----------GATGCCCAA----------------------------------------------------CTGAAG-----------------------------------------------------CT.........2150.20101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACATGAAGCAGCAGACG----------GAT................................................................................................................................2450.20101000
.........................................CAGGGAAAGGTTGCAATTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAATTTA-------------GGCTGACAACATG.........................................................................................................................................................2350.20101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAACAAATTTA-------------GGCTGACAACT...........................................................................................................................................................2550.20101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACATGAAGCAGCAGACG----------GATG...............................................................................................................................2550.20100001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGACG----------GATGCCCAA----------------------------------------------------CTGAAG-----------------------------------------------------...........2650.20101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAATTTA-------------GGCTGACAACATGA........................................................................................................................................................2450.20101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAACATGAAGCAGCAGACG----------GA.................................................................................................................................2450.20101000
..........................................AGGGAAAGGTTGCAATTCTTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.20101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACG----------GATGCCCAA----------------------------------------------------CTGAAG-----------------------------------------------------CA.........2550.20101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAATTTA-------------GGCTGACAACATGA........................................................................................................................................................2350.20101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCCAACAAATTTA-------------GGCTGACAACA...........................................................................................................................................................2750.20100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATGAAGCAGCAGACG----------GATGCCC............................................................................................................................2650.20100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCAACAAATTTA-------------GGCTGACAACATGA........................................................................................................................................................2950.20101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATGAAGCAGCAGACG----------GATG...............................................................................................................................2350.20101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGAAGCAGCAGACG----------GATGCCC............................................................................................................................2450.20101000
.......................................GCCAGGGAAAGGTTGCAATTCTTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.20100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATCCAACAAATTTA-------------GGCTGA................................................................................................................................................................2460.17101000
.................................GCACGCGCCAGGGAAAGGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.17101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCAGCAGACG----------GATGCCCAA----------------------------------------------------T.....................................................................2460.17100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGCAGCAGACG----------GATGCCCAA----------------------------------------------------C.....................................................................2660.17101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGCAGCAGACG----------GATGCCCAT----------------------------------------------------......................................................................2560.17101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCAGCAGACG----------GATGCCCAA----------------------------------------------------C.....................................................................2460.17100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCCAACAAATTTA-------------GGCTGA................................................................................................................................................................2260.17101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTATCCAACAAATTTA-------------GGCTGACAT.............................................................................................................................................................2860.17101000
..................................................................................................................................................................................................................................................TTTTTTTTT--------------A---------AGTTTGTAGTTTA-----ATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCATTTATCCAACAAATTTA-------------GGC...................................................................................................................................................................2660.17101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGCAGCAGACG----------GATGCCCAA----------------------------------------------------CT....................................................................2760.17100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGCAGCAGACG----------GATGC..............................................................................................................................2160.17101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATTTATCCAACAAATTTA-------------GGC...................................................................................................................................................................2560.17101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCAGCAGACG----------GATGCCC............................................................................................................................2160.17100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAACAAATTTA-------------GGCTGACA..............................................................................................................................................................2260.17101000
........AAGTCTGCTAAAACGGCGAATATTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
....................ACGGCGAATATTGGCACGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.14101000
............CTGCTAAAACGGCGAATATTGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14101000
...........TCTGCTAAAACGGCGAATATTGGCACGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.14101000
.....AGCAAGTCTGCTAAAACGGCGAATAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
................TAAAACGGCGAATATTGGCACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.14101000
..........GTCTGCTAAAACGGCGAATATTGGCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.14101000
...........TCTGCTAAAACGGCGAATATTGGCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
.....AGCAAGTCTGCTAAAACGGCGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14101000
..........GTCTGCTAAAACGGCGAATATTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14101000
.............TGCTAAAACGGCGAATATTGGCACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14101000
................TAAAACGGCGAATATTGGCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14101000
.................AAAACGGCGAATATTGGCACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14101000
............CTGCTAAAACGGCGAATATTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.14101000
................TAAAACGGCGAATATTGGCACGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14100010
................TAAAACGGCGAATATTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.14100010
....GAGCAAGTCTGCTAAAACGGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.11101000
droVir3
TTAATATT-T-----------------------------------------T-----------------------------------------------------------------------------TT---AAATATTTTGTTTTGTAATA-------------------CCAAA--------------------------------------------------------------------------------------------AGT------------CTA-----ATCTATGGAATTTTC------TTCGATTTT----TTTTGTCCTTTCCAGCTGTTAAGGCAGCGAGTGAATTTCGTTAATCCAACCAACGTTTGGGCAAATCAGACA---------------------------------------------------------------------------------------------------------------------------------------------AAATTGTTCGCCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAAG-------TGCAAGCTC--------ACGCT--------------------CAAGGACA----------------T--CTGGAG-----------------------------------------------------CAGTTT--GAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
ATAATTTT-A-----------------------------------------T-----------------------------------------------------------------------------TTCCTC---A--------------------------------------------------------------------TA-TT-TT---------------------TGTTTTTTTTTTTTTTTTTTTT------------TTT--------CA----ATTTCT---------------GATATTCCATATTTA----T-------------------------------------------------------------------------------------------ACAGCTTCAACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------C-GCTCAAATCTGGACTTGTCATTGGTGCTAAAATA---------------------------------------------------------------TAGCCAATTAAAATTTTTAGCTATTGC----------------------------------------------------------------------------------------TGACAAAAGTTATGTCCGAAGGCG----------------TTGCTGAAT-----------------------------------------------------CGATTCGAGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATTTTATT-G-----------------------------------------T-----------------------------------------------------------------------------TG---T------------------------------------------------------------------------TTTTTT-TTT---------------------------TTTTA--------------ATATTGC---------TG---------------------------TT-------------------------------------------------------------------------------------GTTG-------------------------------------------TAAGTGTCATTATTGTTTGCTTTCTTAGTTGCTGTCGGTTTTTTTTTTTTTTTGTTGTTTATTTTTGCTGTAACCTTAGAACTTCTCAAGTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
TTTTATTC-T-----------------------------------------T-----------------------------------------------------------------------------CTATTTTTTA------------------TTTATTTTTTTTTTATTATTATTTTTCTTTTATTATTATTAATTTTTTGTTT-----------------------------------------------------------------------------------------------------------------------ATTTTAATTT------------------------------------------------------------------TTTTTTTTGTTTTATGTTATT-T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATTTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ATTAATTT-T-----------------------------------------T-----------------------------------------------------------------------------TG---T------------------------------------------------------------------------TTATTT-TAA-------------------TTTTTTTGTTTTT--------------TTTT---TTTTACTT------------------------------------T----------------------------------------------------------------------------------TG----TATG---------TATGTTATT-TTATTTATTTAAATCAAAATGCATTTTAACTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTCATTTAAATATGTTCAGTCTTTAATTTGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAATAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................AA-------------------TTTTTTTGTTTTT--------------TTTT---TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
droAna3
TTGTTTCG-T-----------------------------------------G-----------------------------------------------------------------------------TT---TCTTTCCTCTTTTCGTTTTCTCG----TT--------TCTCTGT--------------------------------------------------------------------------------------------TCT--------CT----GTTCTC---------------TATACTCTATGTTTC----TGTTCTGGTTTCC-------------TACTTTGAATCTTCT-------------------------CGA------------------------------------------ATC-GATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------TT-----------------GTCTGTCCCCCGTGAGGTT--------------TCTAGTCGATGGCCAC----TGTAA-----------------------------------------------------TTGTAAACAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TAACTTTT-T-----------------------------------------A-----------------------------------------------------------------------------TT---ATTTA---------------------------------------------------------------------T-TT-TG---------------------TGTTTGTTTATGT--------------TTAT------------------------CT---------------TGGCTTT----------------------------------------------------------------------------------TG----TAAT---------TATGTACCTCCAATGTTGTTGAACTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTTATTGGTTTTTAATTA--------------------------------------------------------------------AATTTAAATTTGTGATTTTTTTTTATTCTTTTCTACCAAAACCACCACCCAAAACCAAA-------------CCAACCCACA----------CATGCTTAC----------------------------------------------------CAACCG-----------------------------------------------------CCCCTCAGCGTSizeHit CountTotal NormTotal
No Reads
droKik1
TTTTTCTT-T-----------------------------------------T-----------------------------------------------------------------------------AT---T------------------------------------------------------------------------TTTCTT-GTATTTTTTTCTTGCAT-----------------TTT--------------T---------TTCTTGTATTTTT-----CTCTAG-ATTTTTTC------TTAGACTTT----TTTCTTAGTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCCTAAACTTTT-----TTCTTATATTT----------TT---------ACTACTTAGCATGCATCGCA-------------------G-GCAGTCATT----------------------------------------------------------------------------------------------------------------------------------------------------------GA--------------------C-----------------GTCTG----------------------------------------CAAC----AGAAC-----------------------------------------------------ACGTAGGCAAGSizeHit CountTotal NormTotal
No Reads
droFic1
TGTAGTTT-T-----------------------------------------TAGCAATTTTTGTTTGGTTGGATGTTCTTGTTGCCGTTGTTATTGTTGGTTTACACAGAGCGGTTGC--------TGTTGTTGT---T-------------------------------------TGTTTG--------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTCTTGTTT--------------------------------------------CTTGTTGGTTGTTTAATTTAAATTAAATTAATTACTAAAATT-ATTTTATA-ACAAATATCACTACAATAGTTTGCATTTTTTTGTTGTTTGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTG-----------------------TATCGTTTATCSizeHit CountTotal NormTotal
No Reads
droEle1
ATAGAATT-T-----------------------------------------T-----------------------------------------------------------------------------ACAATATTGTTTTTTTTTAATTATGTTG----TA--------TGCCTAA--------------------------------------------------------------------------------------------TTT------------TTA-----TTTTAAAAAAATGTC------TACAATTTCTTTTAATTTTAAGGACT-------------TGTTTACCATTTTCT-------------------------AGA------------------------------------------GA----------------------------------------------------------------------------------------------------------------------------------ACATTCCACGACA-TCGCCGGCACTG-GCAGTCATCTGGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACGCTTCCCAATCTGAGGAAAACGCTAGAGGASizeHit CountTotal NormTotal
No Reads
droRho1
TTTTGCTT-T-----------------------------------------CTTAAAAATATACTTGATATGAAAT-----------------------------------------------------TT---T---------------------------A--------GGACACA-----TTTTTATTAAAAACAAATCATAGAAT--------------------------------------TTTTGAATTTTTTTTCTGTGCGG---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-GCTTAACA-GCATAGGG-------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAACAG----------CAATATCAG----------------------------------------------------TAGCAG-----------------------------------------------------CAGCGTGAGGCSizeHit CountTotal NormTotal
No Reads
droBia1
TTTTTTTA-A-----------------------------------------T-----------------------------------------------------------------------------AA----------------------------------------------------------------------------TG-CG---------------------------------------------------------------------------------------------------------------------------------------------TATAGTAAATCTTTT-------------------------TTA------------------------AG-----------------GC-CTTAG---------------------------------------------------------AT-----------------------------------------TGACTAAAA------------------------------------------------------------------------------------------------------------------------CCCGTTAATTTTTAATCATCTTTACTTAAAATATTCTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATTSizeHit CountTotal NormTotal
No Reads
droTak1
CGAAGGTA-A-----------------------------------------T-----------------------------------------------------------------------------TTATTTTATT------------------TTTATTATTGTTACTTAATTATATGTTT----------------------------------------------------------------------------------------------------------CT---------------AAACTTGATTATTTA----T---ATAATTTCACGTGCACAATGCAGACAGAAAATCTC----------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTTTATTGGTTTATGATTGAATTTAAATTTTGTAACTTTACTTTTCTTTTTCACCACCCACCAACCC-----------------------------------------------------------------------------GCTTAACCACCAACCATCGTAATCG----------C--------AACCG--------------------CA----------------------A--TGAGCA-----------------------------------------------------GCCTTTGTGGTSizeHit CountTotal NormTotal
No Reads
droEug1
ATTGATTT-T-----------------------------------------A-----------------------------------------------------------------------------TT---CTT-------------------------------------------------------------------------GTT-TTATTAAGATTTTAGATTAAAT--------------------------------AC---------------------TT---------------GA--------------------------------------------------------------------------------------------------------------------------------AATTCAATATATT--------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------ATCAATTTT-----------------------------------------------------------------------------TAAAGTGT------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTTTTGSizeHit CountTotal NormTotal
No Reads
dm3
ATTTTATT-T-----------------------------------------A-----------------------------------------------------------------------------TA---T------------------------------------------------------------------------CA-TT-TT---------------------TGTTTCTTTTTTA--------------GTGACTT---------CA---------------------------CA-------------------------------------------------------------------------------------GTTG-------------------------------------------AAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCAACTTCAATCAAT-------TACATA-----------------------------T--------------TATTATGAGAAACCAC----TATAATAATAGAAATATTTTTCTTTATTCTTTT--------------------------TAATAAAACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................A-TT-TT---------------------TGTTTCTTTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TATTTTTA-T-----------------------------------------A-----------------------TATGTTTTACCAATTTTATTGATATTTAACAGATACATATATT--------TATTTCCAT---A-------------------------------------TATTTTT---------------------------CTT-TCCTTAAATTTCTAAATTATAT--------------------------------------------------------------------------------------------ATTTTACT--------------------------------------------------------------------------------------------------------TTTATTATTCA--------------------TT-------------------------------------CGTAATCTTATATTTCTTCAGGTTTAAACGAGGCTTATTGCCTG-------------------------------------GGCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------------C----------AGA--------------------------------A--TTGTGA------------------------------------------------------CATTTTGCGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................AT--------------------------------------------------------------------------------------------ATTTTACT--------------------------------------------------------------------------------------------------------TTTATTAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
........................................................................................................................................................................................................................................................................................................................................ATTTTACT--------------------------------------------------------------------------------------------------------TTTATTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15180.11200000020000000000
...........................................................................................................................................................................................................................................T--------------------------------------------------------------------------------------------ATTTTACT--------------------------------------------------------------------------------------------------------TTTATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.10200000020000000000
...........................................................................................................................................................................................................................................T--------------------------------------------------------------------------------------------ATTTTACT--------------------------------------------------------------------------------------------------------TTTATTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16130.08100000000010000000
droSec2
ATTTAAATAA-----------------------------------------A------------TTGTTATTTTAT-----------------------------------------------------TT---TCGTATTTTATTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------------------ATTGCTAACATATTTTCTCTCCGTGCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTCTTT---------------------------------------------------------------------------GCCAGTCCCCGGAACTGGACTATCGGCACGAGCTGATGGG--TC-----------------GTCTG----------------------------------------CATA----AAATC--------------------------------------------------GAGCCCGCCGATGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GATCAACA-G-----------------------------------------C-----------------------------------------------------------------------------AAAAGTG--TTCCTTATTTGGCATATTG----TT--------T------------------------------------------T---------------------CGGTATTTTATTTTT--------------G---------GGCTTACCATTTA---------------------------GTGA------------------------------------------------------------------------ATCATATAAATATATGTATGTCGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA--------------------------------T--TTATGA------------------------------------------------------TA-CTCAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TTTCATTT-T-----------------------------------------G-----------------------------------------------------------------------------TT---T-------------------------------------------------------------------------------T---------------------CGTTTTTTTTTTTTTGTTTTTTTTTTGGATGTGC---------------------TT---------------GA--------------------------------------------------------------------------------------------------------------------------------GTTGCAATAGTTTTGTTTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCCTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 08:19 AM