ID:

dwi_3787

 Coordinate:

scf2_1100000004954:5063828-5063978 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.4 -16.4 -16.1

Flybase annnotation

CDS [Dwil\GK23331-cds]; exon [dwil_GLEANR_6651:2]; intron [Dwil\GK23331-in]

No Repeatable elements found

mature
  1. dwi_3780  scf2_1100000004954:5045577-5045603 +
  2. dwi_3787  scf2_1100000004954:5063897-5063923 +
star
  1. scf2_1100000004516:554222-554245 -
  2. scf2_1100000004521:8302854-8302877 -
  3. scf2_1100000004943:1301331-1301354 -
  4. scf2_1100000004943:6843138-6843161 +
  5. scf2_1100000004954:3809751-3809774 -
  6. dwi_3780  scf2_1100000004954:5045514-5045537 +
  7. dwi_3787  scf2_1100000004954:5063834-5063857 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCTTGAAGGACACGTTACCATCGGAGATGCAAGAGGCGTATGAATTGGAAGTAAGCAACATAAAGAAGCTACTTGGGCGATTAAGTAGCTTTTATGAAAGAAACGGAATCAATCAGGACATGTCAATTAAGGAATGTAACAGTAATATATTAGAAATTATTGGTCGGTTTGTCCGATTCGCGGGCGAACAATATTTAAATGTAATAAGGCCAAAAGCACTAACTAATAAACAAAGGAGACAGGGGCTTATT
********************************************************..((((..((((((((((((....)))))))))))))))).....................((((.((......)).)))).........********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V118
embryo
 V119
head
 M020
head
...........ACGTTACCATCGGTGGTGTA............................................................................................................................................................................................................................ 20 3 3 1.67 5 0 2 0 3 0
.......................................................................................................................ATGTCAATTAAGGAATGTAACAGTAAT......................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
.....................CGGAGATGCAAGAGGCGTATGA................................................................................................................................................................................................................ 22 0 2 1.00 2 2 0 0 0 0
..........................................................................................................................................................................................................................CTAACTAATAAACAAAGGAGAC........... 22 0 2 1.00 2 1 1 0 0 0
...................ATCGGAGATGCAAGAGGCGTAT.................................................................................................................................................................................................................. 22 0 2 1.00 2 0 0 0 0 2
....................................................................................................................................................................................CGGGCGAACAATATTTAAATGTAA............................................... 24 0 3 0.67 2 2 0 0 0 0
...........ACGTTACCATCGGTGGTGT............................................................................................................................................................................................................................. 19 3 10 0.60 6 2 1 0 3 0
........................................................AACATAAAGAAGCTACTTGGGCGA........................................................................................................................................................................... 24 0 7 0.57 4 4 0 0 0 0
....................................................................................................................................................................................................AAATGTAATAAGGCCAAAAGCAC................................ 23 0 2 0.50 1 0 1 0 0 0
.......................................................................................................................................................................................................................GCACTAACTAATAAACAAAGGAG............. 23 0 2 0.50 1 0 1 0 0 0
...........................................................................................................................................................................................................................TAACTAATAAACAAAGGAGACAGGGG...... 26 0 2 0.50 1 1 0 0 0 0
......................GGAGATGCAAGAGGCGTATGA................................................................................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0
..............................................................................................................AATCAGGACATGTCAATTAAGGA...................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
...TGAAGGACACGTTACCATCGGAGATG.............................................................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................TTAGAAATTATTGGTCGGTTTG................................................................................ 22 0 2 0.50 1 1 0 0 0 0
.........................................................................TGGGCGATTAAGTAGCTTTTATG........................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................................................ACAAAGGAGACAGGGGCTTATT 22 0 2 0.50 1 0 1 0 0 0
.................CCATCGGAGATGCAAGAGGCGT.................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
................................................................................................................................AAGGAATGTAACAGTAATATATTA................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
...TGAAGGACACGTTACCATCGGAGA................................................................................................................................................................................................................................ 24 0 2 0.50 1 0 0 1 0 0
......................................................................................................................................................................................................................AGCACTAACTAATAAACAAAGGAGACAG......... 28 0 2 0.50 1 1 0 0 0 0
...TGAAGGACACGTTACCATCGGAGATGC............................................................................................................................................................................................................................. 27 0 2 0.50 1 0 0 1 0 0
.......................................................................................................................................................................................................................GCACTAACTAATAAACAAAGGAGACAG......... 27 0 2 0.50 1 0 0 1 0 0
...........ACGTTACCATCGGTGGTGC............................................................................................................................................................................................................................. 19 2 2 0.50 1 0 0 0 1 0
..............CTACCATCGGAGATGCAAGAGGCGT.................................................................................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................................GCACTAACTAATAAACAAAGGAGA............ 24 0 2 0.50 1 1 0 0 0 0
.................CCATCGGAGATGCAAGAGGC...................................................................................................................................................................................................................... 20 0 2 0.50 1 0 0 1 0 0
...............................................................................................................................................................................................................................TAATAAACAAAGGAGACAGGGGC..... 23 0 2 0.50 1 1 0 0 0 0
..TTGAAGGACACGTTACCATCGGAG................................................................................................................................................................................................................................. 24 0 2 0.50 1 0 0 0 1 0
.........................................................................TGGGCGATTAAGTAGCTTTTATGAAAG....................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................................................................AATAAACAAAGGAGACAGGGGCTT... 24 0 2 0.50 1 1 0 0 0 0
.........................................................ACATAAAGAAGCTACTTGGGCGA........................................................................................................................................................................... 23 0 7 0.43 3 3 0 0 0 0
.........................................................ACATAAAGAAGCTACTTGGGCG............................................................................................................................................................................ 22 0 7 0.43 3 3 0 0 0 0
.....................................................................................................................................................................................GGGCGAACAATATTTAAATGTAATA............................................. 25 0 3 0.33 1 1 0 0 0 0
.................................................................................................AAGAAACGGAATCAATCAGGACAT.................................................................................................................................. 24 0 6 0.33 2 2 0 0 0 0
.......CGATACGTTACCATCGGGGA................................................................................................................................................................................................................................ 20 3 3 0.33 1 1 0 0 0 0
............................................................................................................TCAATCAGGACATGTCAATT........................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0
......................................................GCAACATAAAGAAGCTACTTGGGCGA........................................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0
......................................................GCAACATAAAGAAGCTACTTGGG.............................................................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0
.........................................................ACATAAAGAAGCTACTTGGGC............................................................................................................................................................................. 21 0 7 0.29 2 2 0 0 0 0
........................................................AACATAAAGAAGCTACTTGGGCG............................................................................................................................................................................ 23 0 7 0.29 2 2 0 0 0 0
.........................................................ACATAAAGAAGCTACTTGG............................................................................................................................................................................... 19 0 8 0.25 2 2 0 0 0 0
....................................................................................................................................................................................CGGGCGAACAATATTTAAAT................................................... 20 0 4 0.25 1 0 0 0 0 1
.....................................................................................................AACGGAATCAATCAGGAC.................................................................................................................................... 18 0 12 0.25 3 2 0 0 0 1
...........................................................................................TTATGAAAGAAACGGAATCAATC......................................................................................................................................... 23 0 5 0.20 1 0 0 1 0 0
...........................TGCAACAGGCGTATGAATTGGAAGTA...................................................................................................................................................................................................... 26 1 5 0.20 1 0 0 1 0 0
...............................................................................................GAAAGAAACGGAATCAATCAGGACA................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0
...............................................................................ATTAAGTAGCTTTTATGAAAGA...................................................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0
.................................................................................................AAGAAACGGAATCAATCAGGACA................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0
.........................................................ACATAAAGAAGCTACTTGGG.............................................................................................................................................................................. 20 0 7 0.14 1 1 0 0 0 0
........................................................AACATAAAGAAGCTACTTGGG.............................................................................................................................................................................. 21 0 7 0.14 1 0 0 1 0 0
.......................................................CAACATAAAGAAGCTACTTGG............................................................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0
.........................................................ACATAAAGAAGCTACTTGGGT............................................................................................................................................................................. 21 1 8 0.13 1 1 0 0 0 0
...........................................................ATAAAGAAGCTACTTGGGC............................................................................................................................................................................. 19 0 8 0.13 1 0 0 0 1 0
.......................................................................................................................................................................TTTGTCCGATTCGCGGGCGA................................................................ 20 0 9 0.11 1 1 0 0 0 0
...........ACGTTACCATCGGGGAGT.............................................................................................................................................................................................................................. 18 3 20 0.10 2 2 0 0 0 0
............CGTTACCATCGGTGGTGTA............................................................................................................................................................................................................................ 19 3 20 0.10 2 0 0 0 2 0

Anti-sense strand reads

AGAACTTCCTGTGCAATGGTAGCCTCTACGTTCTCCGCATACTTAACCTTCATTCGTTGTATTTCTTCGATGAACCCGCTAATTCATCGAAAATACTTTCTTTGCCTTAGTTAGTCCTGTACAGTTAATTCCTTACATTGTCATTATATAATCTTTAATAACCAGCCAAACAGGCTAAGCGCCCGCTTGTTATAAATTTACATTATTCCGGTTTTCGTGATTGATTATTTGTTTCCTCTGTCCCCGAATAA
*********************************************************************************************************..((((..((((((((((((....)))))))))))))))).....................((((.((......)).)))).........******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
 V119
head
..................................................................................................................................................................CAGCCAAACAGGCTAAGCGCCCGCTTGT............................................................. 28 0 2 58.50 117 116 1 0 0 0
......................................................................................................TGCCTTAGTTAGTCCTGTACAGTTAAT.......................................................................................................................... 27 0 3 33.33 100 40 57 3 0 0
.....TTCCTGTGCAATGGTAGCCTCTACGT............................................................................................................................................................................................................................ 26 0 2 27.50 55 38 17 0 0 0
......................................................................................................TGCCTTAGTTAGTCCTGTACAGTTAA........................................................................................................................... 26 0 3 25.33 76 33 37 6 0 0
......TCCTGTGCAATGGTAGCCTCTACGT............................................................................................................................................................................................................................ 25 0 2 23.50 47 30 16 1 0 0
.................GGTAGCCTCTACGTTCTCCGCATACTT............................................................................................................................................................................................................... 27 0 2 22.00 44 44 0 0 0 0
......................................................................................................................................................................CAAACAGGCTAAGCGCCCGCTTGT............................................................. 24 0 9 20.67 186 182 4 0 0 0
...............................TCTCCGCATACTTAACCTTCATTCGT.................................................................................................................................................................................................. 26 0 2 19.50 39 39 0 0 0 0
..........GTGCAATGGTAGCCTCTACGTTCT......................................................................................................................................................................................................................... 24 0 2 13.00 26 18 8 0 0 0
.....................................................................................................TTGCCTTAGTTAGTCCTGTACAGT.............................................................................................................................. 24 0 3 12.67 38 27 11 0 0 0
.......................................................GTTGTATTTCTTCGATGAACCCGCT........................................................................................................................................................................... 25 0 7 11.57 81 17 63 0 0 1
...................................................................................................................................................................AGCCAAACAGGCTAAGCGCCCGCTTGT............................................................. 27 0 2 11.50 23 23 0 0 0 0
.........................................................TGTATTTCTTCGATGAACCCGCTAAT........................................................................................................................................................................ 26 0 3 11.00 33 32 0 0 0 1
.................GGTAGCCTCTACGTTCTCCGCATACT................................................................................................................................................................................................................ 26 0 2 10.50 21 20 1 0 0 0
.....................................................................................................TTGCCTTAGTTAGTCCTGTACAGTTAA........................................................................................................................... 27 0 3 10.00 30 24 6 0 0 0
...........................................................................................................TAGTTAGTCCTGTACAGTTAATTCCT...................................................................................................................... 26 0 2 9.50 19 14 4 0 1 0
.......................................................................GAACCCGCTAATTCATCGAAAATACTT......................................................................................................................................................... 27 0 2 8.50 17 11 6 0 0 0
.......................................................................................CGAAAATACTTTCTTTGCCTTAGTTAGT........................................................................................................................................ 28 0 5 8.20 41 41 0 0 0 0
....................AGCCTCTACGTTCTCCGCATACTTAACCT.......................................................................................................................................................................................................... 29 0 2 8.00 16 16 0 0 0 0
.................................................................................................................................................................CCAGCCAAACAGGCTAAGCGCCCGCTTGT............................................................. 29 0 2 8.00 16 16 0 0 0 0
...........................................................................CCGCTAATTCATCGAAAATACTTTCTT..................................................................................................................................................... 27 0 2 8.00 16 15 1 0 0 0
...........................................................................CCGCTAATTCATCGAAAATACTTTCT...................................................................................................................................................... 26 0 2 7.50 15 12 3 0 0 0
....................................................................................................................................................................................................................TTTCGTGATTGATTATTTGTTTCCT.............. 25 0 2 7.00 14 12 2 0 0 0
.....................................................................................................................................................................CCAAACAGGCTAAGCGCCCGCTTGT............................................................. 25 0 2 7.00 14 14 0 0 0 0
....................................................................................................................................................................GCCAAACAGGCTAAGCGCCCGCTTGT............................................................. 26 0 2 7.00 14 13 1 0 0 0
..............................................................................................................................................................................................................TCCGGTTTTCGTGATTGATTATTTGT................... 26 0 2 6.50 13 10 3 0 0 0
...........................ACGTTCTCCGCATACTTAACCTTCAT...................................................................................................................................................................................................... 26 0 2 6.00 12 12 0 0 0 0
............................................................ATTTCTTCGATGAACCCGCTAATTCAT.................................................................................................................................................................... 27 0 3 6.00 18 15 1 2 0 0
...............................................................................................................TAGTCCTGTACAGTTAATTCCTTACAT................................................................................................................. 27 0 2 5.50 11 11 0 0 0 0
................................................................................................................AGTCCTGTACAGTTAATTCCTTACAT................................................................................................................. 26 0 2 5.50 11 11 0 0 0 0
..................................................................................................................................................................CAGCCAAACAGGCTAAGCGCCCGCTTG.............................................................. 27 0 2 5.50 11 11 0 0 0 0
..................................CCGCATACTTAACCTTCATTCGTTGTAT............................................................................................................................................................................................. 28 0 2 5.50 11 11 0 0 0 0
.......CCTGTGCAATGGTAGCCTCTACGT............................................................................................................................................................................................................................ 24 0 2 5.00 10 6 3 1 0 0
.......................................................................GAACCCGCTAATTCATCGAAAATACT.......................................................................................................................................................... 26 0 2 5.00 10 9 1 0 0 0
.....................................................................................................TTGCCTTAGTTAGTCCTGTACAGTT............................................................................................................................. 25 0 3 4.67 14 7 7 0 0 0
..........................................................................................................................................................................CAGGCTAAGCGCCCGCTTGTTATAAAT...................................................... 27 0 4 4.00 16 16 0 0 0 0
AGAACTTCCTGTGCAATGGTAGCCTCT................................................................................................................................................................................................................................ 27 0 2 4.00 8 8 0 0 0 0
.......CCTGTGCAATGGTAGCCTCTACGTTCT......................................................................................................................................................................................................................... 27 0 2 4.00 8 7 1 0 0 0
.....................................................................................................TTGCCTTAGTTAGTCCTGTACAGTTAAT.......................................................................................................................... 28 0 3 3.67 11 10 0 1 0 0
.........................................................................................................................................................................ACAGGCTAAGCGCCCGCTTGTTATAAAT...................................................... 28 0 4 3.50 14 14 0 0 0 0
.......................................................................................................................................................................................................................CGTGATTGATTATTTGTTTCCTCTGT.......... 26 0 2 3.50 7 3 4 0 0 0
......TCCTGTGCAATGGTAGCCTCTACGTTCT......................................................................................................................................................................................................................... 28 0 2 3.50 7 7 0 0 0 0
.......................................................GTTGTATTTCTTCGATGAACCCGC............................................................................................................................................................................ 24 0 7 3.43 24 8 16 0 0 0
......................................................................................................................................................................CAAACAGGCTAAGCGCCCGCTTGTTAT.......................................................... 27 0 9 3.11 28 28 0 0 0 0
..............................................................TTCTTCGATGAACCCGCTAATTCAT.................................................................................................................................................................... 25 0 3 3.00 9 9 0 0 0 0
..............................................................................................................................................................................................................TCCGGTTTTCGTGATTGATTATTTGTT.................. 27 0 2 3.00 6 4 1 0 1 0
........................................ACTTAACCTTCATTCGTTGTATTTCTT........................................................................................................................................................................................ 27 0 2 3.00 6 6 0 0 0 0
..........GTGTGATGGTAGCCGCTACG............................................................................................................................................................................................................................. 20 3 3 3.00 9 9 0 0 0 0
......................................................................................................TGCCTTAGTTAGTCCTGTACAGTTAATT......................................................................................................................... 28 0 3 3.00 9 6 1 2 0 0
....CTTCCTGTGCAATGGTAGCCTCTACGT............................................................................................................................................................................................................................ 27 0 2 3.00 6 5 1 0 0 0
......TCCTGTGCAATGGTAGCCTCTACGTT........................................................................................................................................................................................................................... 26 0 2 3.00 6 3 3 0 0 0
.................GGTAGCCTCTACGTTCTCCGCATAC................................................................................................................................................................................................................. 25 0 2 3.00 6 5 1 0 0 0
.......................................................................................................GCCTTAGTTAGTCCTGTACAGTTAAT.......................................................................................................................... 26 0 3 2.67 8 6 2 0 0 0
.........................CTACGTTCTCCGCATACTTAACCTTCAT...................................................................................................................................................................................................... 28 0 2 2.50 5 5 0 0 0 0
..............................................................................................................................................................................................................TCCGGTTTTCGTGATTGATTATTTGTTT................. 28 0 2 2.50 5 4 0 0 1 0
.............................GTTCTCCGCATACTTAACCTTCATTCGT.................................................................................................................................................................................................. 28 0 2 2.50 5 5 0 0 0 0
......................................ATACTTAACCTTCATTCGTTGTATTT........................................................................................................................................................................................... 26 0 2 2.50 5 5 0 0 0 0
................................................................................................................................................................................................................CGGTTTTCGTGATTGATTATTTGTTT................. 26 0 2 2.50 5 2 3 0 0 0
............................................................................................................AGTTAGTCCTGTACAGTTAATTCCT...................................................................................................................... 25 0 2 2.50 5 4 1 0 0 0
..........................................................................................................................................TGTCATTATATAATCTTTAATAACCAGC..................................................................................... 28 0 2 2.50 5 2 2 0 1 0
........................................................................................................................ACAGTTAATTCCTTACATTGTCAT........................................................................................................... 24 0 2 2.50 5 5 0 0 0 0
..................................................................................................TCTTTGCCTTAGTTAGTCCTGTACAGT.............................................................................................................................. 27 0 3 2.33 7 7 0 0 0 0
.......................................................................................................GCCTTAGTTAGTCCTGTACAGTTAA........................................................................................................................... 25 0 3 2.33 7 7 0 0 0 0
....................AGCCTCTACGTTCTCCGCATACTTAACC........................................................................................................................................................................................................... 28 0 2 2.00 4 4 0 0 0 0
.......................................................................................................................................................................................................ACATTATTCCGGTTTTCGTGATTGAT.......................... 26 0 2 2.00 4 4 0 0 0 0
........................................ACTTAACCTTCATTCGTTGTATTTCT......................................................................................................................................................................................... 26 0 2 2.00 4 4 0 0 0 0
......................................................................................................................................................................................................................TCGTGATTGATTATTTGTTTCCTCTGT.......... 27 0 2 2.00 4 2 2 0 0 0
.......................CTCTACGTTCTCCGCATACTTAACCT.......................................................................................................................................................................................................... 26 0 2 2.00 4 4 0 0 0 0
......................................ATACTTAACCTTCATTCGTTGTATTTCT......................................................................................................................................................................................... 28 0 2 2.00 4 4 0 0 0 0
............GCAATGGTAGCCTCTACGTTCTCCGCAT................................................................................................................................................................................................................... 28 0 2 2.00 4 4 0 0 0 0
...............................TCTCCGCATACTTAACCTTCATTCGTTGT............................................................................................................................................................................................... 29 0 2 2.00 4 4 0 0 0 0
............GCAATGGTAGCCTCTACGTTCTCCGC..................................................................................................................................................................................................................... 26 0 2 2.00 4 4 0 0 0 0
.................................................................................................................................................................CCAGCCAAACAGGCTAAGCGCCCGCT................................................................ 26 0 2 2.00 4 4 0 0 0 0
...........................................................................................................................................................................AGGCTAAGCGCCCGCTTGTTATAAAT...................................................... 26 0 4 1.75 7 6 0 1 0 0
..........GTGTGATGGTAGCCGCTACGT............................................................................................................................................................................................................................ 21 3 3 1.67 5 5 0 0 0 0
....................................................................................................................................................................................GCCCGCTTGTTATAAATTTACATTAT............................................. 26 0 3 1.67 5 4 1 0 0 0
.......................................................................................................................................................................AAACAGGCTAAGCGCCCGCTTGT............................................................. 23 0 9 1.56 14 12 2 0 0 0
.....................................................................................................................................................................................................TTACATTATTCCGGTTTTCGTGATTGAT.......................... 28 0 2 1.50 3 3 0 0 0 0
....................................................................................................................................................................................................................TTTCGTGATTGATTATTTGTTTCCTCTGT.......... 29 0 2 1.50 3 3 0 0 0 0
.................................................................................................................................TCCTTACATTGTCATTATATAATCT................................................................................................. 25 0 2 1.50 3 3 0 0 0 0
.................................................................................................................................................................................................................GGTTTTCGTGATTGATTATTTGTTT................. 25 0 2 1.50 3 2 1 0 0 0
.....................GCCTCTACGTTCTCCGCATACTTAACCT.......................................................................................................................................................................................................... 28 0 2 1.50 3 3 0 0 0 0
......................................................................................................................GTACAGTTAATTCCTTACATTGTCAT........................................................................................................... 26 0 2 1.50 3 3 0 0 0 0
....................AGCCTCTACGTTCTCCGCATACTT............................................................................................................................................................................................................... 24 0 2 1.50 3 3 0 0 0 0
.........................CTACGTTCTCCGCATACTTAACCTT......................................................................................................................................................................................................... 25 0 2 1.50 3 3 0 0 0 0
...........................ACGTTCTCCGCATACTTAACCTTCATT..................................................................................................................................................................................................... 27 0 2 1.50 3 3 0 0 0 0
...ACTTCCTGTGCAATGGTAGCCTCT................................................................................................................................................................................................................................ 24 0 2 1.50 3 1 2 0 0 0
.GAACTTCCTGTGCAATGGTAGCCTCTAC.............................................................................................................................................................................................................................. 28 0 2 1.50 3 3 0 0 0 0
..................................CCGCATACTTAACCTTCATTCGTTGT............................................................................................................................................................................................... 26 0 2 1.50 3 3 0 0 0 0
.................................................................................................................................TCCTTACATTGTCATTATATAATCTT................................................................................................ 26 0 2 1.50 3 3 0 0 0 0
..............................................................................................................................................................................................................................GATTATTTGTTTCCTCTGTCCCCGAAT.. 27 0 2 1.50 3 3 0 0 0 0
.......................................................................GAACCCGCTAATTCATCGAAAATAC........................................................................................................................................................... 25 0 2 1.50 3 3 0 0 0 0
.................GGTAGCCTCTACGTTCTCCGCAT................................................................................................................................................................................................................... 23 0 2 1.50 3 3 0 0 0 0
........................................................................................................................ACAGTTAATTCCTTACATTGTCATT.......................................................................................................... 25 0 2 1.50 3 3 0 0 0 0
.....................................................................................................................................TACATTGTCATTATATAATCTTTAAT............................................................................................ 26 0 2 1.50 3 3 0 0 0 0
....................................................................................................................................................................................................................TTTCGTGATTGATTATTTGTTTCCTCT............ 27 0 2 1.50 3 2 1 0 0 0
........................................................................................................................ACAGTTAATTCCTTACATTGTCATTAT........................................................................................................ 27 0 2 1.50 3 3 0 0 0 0
......................................................................................................................................................................CAAACAGGCTAAGCGCCCGCTTG.............................................................. 23 0 9 1.44 13 13 0 0 0 0
.......................................................................................CGAAAATACTTTCTTTGCCTTAGT............................................................................................................................................ 24 0 5 1.40 7 4 3 0 0 0
...................................................................................................CTTTGCCTTAGTTAGTCCTGTACAGT.............................................................................................................................. 26 0 3 1.33 4 3 1 0 0 0
....................................................................................................TTTGCCTTAGTTAGTCCTGTACAGTTAA........................................................................................................................... 28 0 3 1.33 4 4 0 0 0 0
....................................................................................................TTTGCCTTAGTTAGTCCTGTACAGT.............................................................................................................................. 25 0 3 1.33 4 2 2 0 0 0
.........................................................................................................................................................................ACAGGCTAAGCGCCCGCTTGTTAT.......................................................... 24 0 9 1.33 12 11 1 0 0 0
....................................................................................CATCGAAAATACTTTCTTTGCCTTAGTT........................................................................................................................................... 28 0 5 1.20 6 5 1 0 0 0
.......................................................................................CGAAAATACTTTCTTTGCCTTAGTT........................................................................................................................................... 25 0 5 1.20 6 6 0 0 0 0
....................................................................................................................................................................GCCAAACAGGCTAAGCGCCCGCTTG.............................................................. 25 0 2 1.00 2 2 0 0 0 0
........................................................................................................CCTTAGTTAGTCCTGTACAGTTAAT.......................................................................................................................... 25 0 3 1.00 3 3 0 0 0 0
.........................CTACGTTCTCCGCATACTTAACCTTCATT..................................................................................................................................................................................................... 29 0 2 1.00 2 2 0 0 0 0
..............................................................................................ACTTTCTTTGCCTTAGTTAGTCCTGT................................................................................................................................... 26 0 5 1.00 5 5 0 0 0 0
......................................................................................................TGCCTTAGTTAGTCCTGTACAGT.............................................................................................................................. 23 0 3 1.00 3 2 0 1 0 0
...................................................................CGATGAACCCGCTAATTCATCGAAAAT............................................................................................................................................................. 27 0 2 1.00 2 2 0 0 0 0
..................................................................TCGATGAACCCGCTAATTCATCGAAAAT............................................................................................................................................................. 28 0 2 1.00 2 2 0 0 0 0
...................................................................................TCATCGAAAATACTTTCTTTGCCTTAGT............................................................................................................................................ 28 0 5 1.00 5 4 1 0 0 0
.............................................................................................................................TAATTCCTTACATTGTCATTATAT...................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
..............................................................TTCTTCGATGAACCCGCTAATTCATC................................................................................................................................................................... 26 0 3 1.00 3 3 0 0 0 0
...............................................................TCTTCGATGAACCCGCTAATTCATC................................................................................................................................................................... 25 0 3 1.00 3 3 0 0 0 0
.................................................................................................................................................................CCAGCCAAACAGGCTAAGCGCCCGCTTG.............................................................. 28 0 2 1.00 2 2 0 0 0 0
......TCCTGTGCAATGGTAGCCTCTACG............................................................................................................................................................................................................................. 24 0 2 1.00 2 2 0 0 0 0
..........GTGCAATGGTAGCCTCTACGTTCTCCGC..................................................................................................................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0
......................................................................................................................GTACAGTTAATTCCTTACATTGTCATTAT........................................................................................................ 29 0 2 1.00 2 2 0 0 0 0
..........................................................................CCCGCTAATTCATCGAAAATACTTTCTT..................................................................................................................................................... 28 0 2 1.00 2 1 1 0 0 0
.............................................................................................................................TAATTCCTTACATTGTCATTATATAATCT................................................................................................. 29 0 2 1.00 2 2 0 0 0 0
.................................................................................................TTCTTTGCCTTAGTTAGTCCTGTACAGT.............................................................................................................................. 28 0 3 1.00 3 3 0 0 0 0
..........................................................................................................TTAGTTAGTCCTGTACAGTTAATTCCT...................................................................................................................... 27 0 2 1.00 2 1 1 0 0 0
..........................................................................................................................................................TTAATAACCAGCCAAACAGGCTAAGCGC..................................................................... 28 0 2 1.00 2 2 0 0 0 0
.................GGTATCCTCTACGTTCTCCGCATACTT............................................................................................................................................................................................................... 27 1 2 1.00 2 2 0 0 0 0
...........................ACGTTCTCCGCATACTTAACCTTCATTC.................................................................................................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0
...................................................................................................................................................................AGCCAAACAGGCTAAGCGCCCGCTTG.............................................................. 26 0 2 1.00 2 2 0 0 0 0
...............................................................................................................TAGTCCTGTACAGTTAATTCCTTACA.................................................................................................................. 26 0 2 1.00 2 2 0 0 0 0
............................................................................CGCTAATTCATCGAAAATACTTTCTT..................................................................................................................................................... 26 0 2 1.00 2 1 1 0 0 0
........................................ACTTAACCTTCATTCGTTGTATTT........................................................................................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
.........................................................TGTATTTCTTCGATGAACCCGCTAATT....................................................................................................................................................................... 27 0 3 1.00 3 3 0 0 0 0
...............................TCTCCGCATACTTAACCT.......................................................................................................................................................................................................... 18 0 2 1.00 2 2 0 0 0 0
.........................................................................................................CTTAGTTAGTCCTGTACAGTTAATT......................................................................................................................... 25 0 3 1.00 3 2 1 0 0 0
....................................................................GATGAACCCGCTAATTCATCGAAAAT............................................................................................................................................................. 26 0 2 1.00 2 1 1 0 0 0
.................................................................................................................................................................ACAGCCAAACAGGCTAAGCGCCCGCTTGT............................................................. 29 1 2 1.00 2 1 1 0 0 0
..........................................................................CCCGCTAATTCATCGAAAATACTTTCT...................................................................................................................................................... 27 0 2 1.00 2 1 1 0 0 0
...................................................................................................................................................................................................................TTTTCGTGATTGATTATTTGTTTCCT.............. 26 0 2 1.00 2 2 0 0 0 0
............................................................................................................................................................................................................ATTCCGGTTTTCGTGATTGATTAT....................... 24 0 2 1.00 2 2 0 0 0 0
.............................................................................................................................................................................................................................TGATTATTTGTTTCCTCTGTCCCCGAAT.. 28 0 2 1.00 2 1 1 0 0 0
....................AGCCTCTACGTTCTCCGCATAC................................................................................................................................................................................................................. 22 0 2 1.00 2 2 0 0 0 0
.......CCTGTGCAATGGTAGCCTCTACGTTC.......................................................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
.............................................................TTTCTTCGATGAACCCGCTAATTCAT.................................................................................................................................................................... 26 0 3 1.00 3 2 1 0 0 0
...............................................................................................................................................................AACCAGCCAAACAGGCTAAGCGCCCGCT................................................................ 28 0 2 1.00 2 2 0 0 0 0
......................................................................................................TGCCTTAGTTAGTCCTGTACAGTT............................................................................................................................. 24 0 3 1.00 3 0 3 0 0 0
....TTTCCTGTGCAATGGTAGCCTCTACGT............................................................................................................................................................................................................................ 27 1 2 1.00 2 0 2 0 0 0
...........................ACGTTCTCCGCATACTTAACCTTCA....................................................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0
..............................................................................................................................................................................................................TCCGGTTTTCGTGATTGATTATT...................... 23 0 2 1.00 2 2 0 0 0 0
.....................................................................................................................................................................CCAAACAGGCTAAGCGCCCGCTTG.............................................................. 24 0 2 1.00 2 2 0 0 0 0
................................................................................................................................TTCCTTACATTGTCATTATATAATCT................................................................................................. 26 0 2 1.00 2 2 0 0 0 0
.........TGTGCAATGGTAGCCTCTACGTTCT......................................................................................................................................................................................................................... 25 0 2 1.00 2 1 1 0 0 0
...........................................................................................................TAGTTAGTCCTGTACAGTTAATTCCTT..................................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
..........................................................................................................................................................................CAGGCTAAGCGCCCGCTTGTTAT.......................................................... 23 0 9 0.78 7 6 0 1 0 0
.........................................................................................................................................................................ACAGGCTAAGCGCCCGCTTGTTATA......................................................... 25 0 4 0.75 3 3 0 0 0 0
............................................................................................................................................................................GGCTAAGCGCCCGCTTGTTATAAATT..................................................... 26 0 4 0.75 3 2 1 0 0 0
..........................................................................................................................................................................CAGGCTAAGCGCCCGCTTGTTATAAATT..................................................... 28 0 4 0.75 3 3 0 0 0 0
..........................................................GTATTTCTTCGATGAACCCGCTAAT........................................................................................................................................................................ 25 0 3 0.67 2 2 0 0 0 0
.....................................................................................................TTGCCTTAGTTAGTCCTGTACAG............................................................................................................................... 23 0 3 0.67 2 2 0 0 0 0
................................................................................................TTTCTTTGCCTTAGTTAGTCCTGT................................................................................................................................... 24 0 6 0.67 4 0 4 0 0 0
......................................................................................................TGCCTTAGTTAGTCATGTACAGTTAA........................................................................................................................... 26 1 3 0.67 2 1 1 0 0 0
.......................................................................................................GCCTTAGTTAGTCCTGTACAGTTAATT......................................................................................................................... 27 0 3 0.67 2 2 0 0 0 0
..........................................................GTATTTCTTCGATGAACCCGCTAA......................................................................................................................................................................... 24 0 3 0.67 2 2 0 0 0 0
...................................................................................................................................................................................CGCCCGCTTGTTATAAATTTACATTAT............................................. 27 0 3 0.67 2 2 0 0 0 0
..........................................................GTATTTCTTCGATGAACCCGCTAATT....................................................................................................................................................................... 26 0 3 0.67 2 2 0 0 0 0
.................................................................................................................................................................................AGCGCCCGCTTGTTATAAATTTACATT............................................... 27 0 3 0.67 2 2 0 0 0 0
........................................................................................................CCTTAGTTAGTCCTGTACAGTTAATT......................................................................................................................... 26 0 3 0.67 2 2 0 0 0 0
.....................................................................................................TTGCCTTAGTTAGTCCTGTACAGTTA............................................................................................................................ 26 0 3 0.67 2 2 0 0 0 0
......................................................................................................TGCCTTAGTTAGTCCTGTACAGTTA............................................................................................................................ 25 0 3 0.67 2 1 1 0 0 0
......................................................CGTTGTATTTCTTCGATGAACCCGC............................................................................................................................................................................ 25 0 3 0.67 2 0 2 0 0 0
..............................................................TTCTTCGATGAACCCGCTAATTCA..................................................................................................................................................................... 24 0 3 0.67 2 2 0 0 0 0
.................................................................................................TTCTTTGCCTTAGTTAGTCCTGTACAG............................................................................................................................... 27 0 3 0.67 2 2 0 0 0 0
......................................................................................TCGAAAATACTTTCTTTGCCTTAGTT........................................................................................................................................... 26 0 5 0.60 3 2 1 0 0 0
.......................................................................................................................................................................AAACAGGCTAAGCGCCCGCTTGTTAT.......................................................... 26 0 9 0.56 5 4 1 0 0 0
..................................................................................................................................................................CAGCCAAACAGGCTAAGCGCCCTTGT............................................................... 26 3 2 0.50 1 1 0 0 0 0
......................................................................................................................GTACAGTTAATTCCTTACATTGTCA............................................................................................................ 25 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................TATAAATTTACATTATTCCGGTT...................................... 23 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................TTCCGGTTTTCGTGATTGAT.......................... 20 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................TTCCGGTTTTCGTGATTGATTATTTGT................... 27 0 2 0.50 1 1 0 0 0 0
.....TTCCTGTGCAATGGTAGCCTCTACGTTCT......................................................................................................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................ATTCCGGTTTTCGTGATTGATTATT...................... 25 0 2 0.50 1 0 1 0 0 0
......................................................................................................................................ACATTGTCATTATATAATCTTTAAT............................................................................................ 25 0 2 0.50 1 1 0 0 0 0
..........GTGCAATGGTAGCCTCTACGTTC.......................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................TAACCAGCCAAACAGGCTAAGCGCCCGCT................................................................ 29 0 2 0.50 1 1 0 0 0 0
..AACTTCCTGTGCAATGGTAGCCTCTA............................................................................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
......................................................................TGAACCCGCTAATTCATCGAAAATACT.......................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................AAATTTACATTATTCCGGTTTTCGT................................. 25 0 2 0.50 1 1 0 0 0 0
....ATTCCTGTGCAATGGTAGCCTCTACGT............................................................................................................................................................................................................................ 27 1 2 0.50 1 1 0 0 0 0
AGAACTTCCTGTGCAATGGCAGCCTCT................................................................................................................................................................................................................................ 27 1 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................CCGGTTTTCGTGATTGATTATTTGTT.................. 26 0 2 0.50 1 0 1 0 0 0
........................................................................TACCCGCTAATTCATCGAAAATACTT......................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
................................................................................................................AGTCCTGTACAGTTAATTCCT...................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
.................................................................................................................GTCCTGTACAGTTAATTCC....................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
.....TTCCTGTGCAATGGTAGCCTCTACTT............................................................................................................................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0
............................................................................................................AGTTAGTCCTGTACAGTTAATTCCTT..................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
....................AGCCTCTACGTTCTCCGCATACTTAAC............................................................................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................AAATTTACATTATTCCGGTTTTCGTGAT.............................. 28 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................................................CGGTTTTCGTGATTGATTATCTGTT.................. 25 1 2 0.50 1 0 1 0 0 0
.............................GTTCTCCGCATACTTAACCTTCA....................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
...............................................................................................................TAGTCCTGTACAGTTAATTCCTTAC................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................TTACATTATTCCGGTTTTCGTGA............................... 23 0 2 0.50 1 1 0 0 0 0
..............................................................................CTAATTCATCGAAAATACTTTCT...................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................TAATTCCTTACATTGTCATTATATAA.................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................TCGTGATTGATTATTTGT................... 18 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................TCAGCCAAACAGGCTAAGCGCCCGCTTGT............................................................. 29 1 2 0.50 1 1 0 0 0 0
........CTGTGCAATGGTAGCCTCTACGTTC.......................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...........................................TAACCTTCATTCGTTGTATTTCT......................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
..........GTGCAATGGTAGCCTCTACGTTAT......................................................................................................................................................................................................................... 24 1 2 0.50 1 0 1 0 0 0
..........................................................................................................................................................................................................TTATTCCGGTTTTCGTGATTGATTAT....................... 26 0 2 0.50 1 1 0 0 0 0
...............................TCTCCGCATACTTAACCTTCATTCG................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................AATTCCTTACATTGTCATTATATAATCT................................................................................................. 28 0 2 0.50 1 1 0 0 0 0
........................TCTACGTTCTCCGCATACTTAACCT.......................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
........................................................................................................................ACAGTTAATTCCTTACATTGTCATGCG........................................................................................................ 27 3 2 0.50 1 1 0 0 0 0
......................................................................TGAACCCGCTAATTCATCGAAAATACTT......................................................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0
........................................................................AACCCGCTAATTCATCGAAAAT............................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................................GCGCCCGCTTGTTATAAATTTACAT................................................ 25 0 4 0.50 2 1 1 0 0 0
......................................................................................................................................................................................................................................GTTTCCTCTGTCCCCGAATA. 20 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................TATTCCGGTTTTCGTGATTGATTA........................ 24 0 2 0.50 1 0 1 0 0 0
...GTTCCCTGTGCAATGGTAGCCTCTACGT............................................................................................................................................................................................................................ 28 3 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................GCCAAACAGGCTAAGCGCCCCCTTGT............................................................. 26 1 2 0.50 1 1 0 0 0 0
............................................................................CGCTAATTCATCGAAAATACTTTCTTT.................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................TCTTTACATTGTCATTATATAATCTT................................................................................................ 26 1 2 0.50 1 0 1 0 0 0
.....................................................................................................................................TACATTGTCATTATATAATCTTTAA............................................................................................. 25 0 2 0.50 1 1 0 0 0 0
.......CCTGTGCAATGGTAGCCTCTACGTT........................................................................................................................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0
AGAACTTCCTGTGCAATGGTAGCCTC................................................................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................TATAAATTTACATTATTCCGGTTTTCGT................................. 28 0 2 0.50 1 1 0 0 0 0
...............................................................................................................TAGTCCTGTACAGTTAATTCCT...................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................CAGCCAAACAGGCTAAGCGCCCGCTT............................................................... 26 0 2 0.50 1 1 0 0 0 0
............GCAATGGTAGCCTCTACGTTCTCCGCA.................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
...................................................................................................................CCTGTACAGTTAATTCCTTACATTGTCA............................................................................................................ 28 0 2 0.50 1 1 0 0 0 0
.......................CTCTACGTTCTCCGCATACTTAACC........................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...........................................................................................................TAGTTAGTCCTGTACAGTTAATTCC....................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................TTTCGTGATTGATTATTTGTTTCCTCTG........... 28 0 2 0.50 1 1 0 0 0 0
................................................TTCATTCGTTGTATTTCTTCGAT.................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
................................CTCCGCATACTTAACCTTCATTCGTTGT............................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................GCCAAACAGGCTAAGCGCCCGCTT............................................................... 24 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................TCCGGTTTTCGTGATCGATTATTTGT................... 26 1 2 0.50 1 1 0 0 0 0
...........................................................................CCGCTGATTCATCGAAAATACTTTCTT..................................................................................................................................................... 27 1 2 0.50 1 0 1 0 0 0
...........................................................................CCGCTAATTCATCGAAAATACTTTC....................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
......TCCTGTGCAATGGTAGCCTCTGCGT............................................................................................................................................................................................................................ 25 1 2 0.50 1 0 1 0 0 0
...........................ACGTTCTCCGCATACTTAAC............................................................................................................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................TCGTGATTGATTATTTGTTTC................ 21 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................ACCAGCCAAACAGGCTAAGCGCCCGCTT............................................................... 28 0 2 0.50 1 1 0 0 0 0
..................................................................TCGATGAACCCGCTAAGTCATCGAAAAT............................................................................................................................................................. 28 1 2 0.50 1 1 0 0 0 0
...................TAGCCTCTACGTTCTCCGCATACTT............................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...................................................................................................................CCTGTACAGCTAATTCCTTACATTGTCAT........................................................................................................... 29 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................TTCCGGTTTTCGTGATTGATTATTT..................... 25 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................................TGATTATTTGTTTCCTCTGTCCCCGAA... 27 0 2 0.50 1 1 0 0 0 0
..............................................................................................................GTAGTCCTGTACAGTTAATTCCTTACAT................................................................................................................. 28 1 2 0.50 1 1 0 0 0 0
...........TGCAATGGTAGCCTCTACGTTCTCCGCAT................................................................................................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................TCCGGTTTTCGTGATTGATTATATG.................... 25 1 2 0.50 1 1 0 0 0 0
.................................................................................................TTCTTTGCCTTAGTTAGTCCTGT................................................................................................................................... 23 0 6 0.50 3 0 3 0 0 0
...............................................................................................................................................................AACCAGCCAAACAGGCTAAGCGCCCGC................................................................. 27 0 2 0.50 1 1 0 0 0 0
...............ATGGTAGCCTCTACGTTCTCCGCATACT................................................................................................................................................................................................................ 28 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................TTTCGTGATTGATTATTTGTTTCC............... 24 0 2 0.50 1 1 0 0 0 0
................................................................................................................AGTCCTGTACAGTTAATTCCTTACATTGT.............................................................................................................. 29 0 2 0.50 1 1 0 0 0 0
............................CGTTCTCCGCATACTTAACCTTCAT...................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................AAACCAGCCAAACAGGCTAAGCGCCCGC................................................................. 28 1 2 0.50 1 0 1 0 0 0
..............................................................................................................ATAGTCCTGTACAGTTAATTCCTTACAT................................................................................................................. 28 1 2 0.50 1 1 0 0 0 0
AGAACTTCCTGTGCAATGGTAG..................................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
.................................................................................................................GTCCTGTACAGTTAATTCCTTACAT................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................CCGGTTTTCGTGATTGATTATTTGT................... 25 0 2 0.50 1 1 0 0 0 0
...ATTTCCTGTGCAATGGTAGCCTCTACGT............................................................................................................................................................................................................................ 28 1 2 0.50 1 1 0 0 0 0
.....................................................................................................................................TACATTGTCATTATATAAT................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
...............................TCTCCGCATACTTAACCTTCATT..................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
..................................CCGCATACTTAACCTTCATTCGTTGTA.............................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................CCAAACAGGCTAAACGCCCGCTTGT............................................................. 25 1 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................................................CGGTTTTCGTGATTGATTATTTGT................... 24 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................TTACATTATTCCGGTTTTCGTGAT.............................. 24 0 2 0.50 1 1 0 0 0 0
...................................................................................................................CCTGTACAGTTAATTCCTTACATTGTCAT........................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
.............................GTTCTCCGCATACTTAACCTTCATTCG................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.....TTCCTGTTCAATGGTAGCCTCTACGT............................................................................................................................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0
........................................ACTTAACCTTCATTGGTTGTATTTCT......................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................TTTCGTGATTGATTATTTGT................... 20 0 2 0.50 1 1 0 0 0 0
....................................GCATACTTAACCTTCATTCGTTGTAT............................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................TCCGGTTTTCGTGATTGATTATTT..................... 24 0 2 0.50 1 1 0 0 0 0
.....TTCCTGTGCAATGGTAGCCTCTGCGT............................................................................................................................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0
..AACTTCCTGTGCAATGGTAGCCTCTACGT............................................................................................................................................................................................................................ 29 0 2 0.50 1 1 0 0 0 0
.................................TCCGCATACTTAACCTTCATTCG................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................................TGATTATTTGTTTCCTCTGTCCCCGA.... 26 0 2 0.50 1 0 1 0 0 0
...............................TCTCCGCATACTTAACCTTCATTCGTT................................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................TTTTGTGATTGATTATTTGTTTCCT.............. 25 1 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................TCGTGATTGATTATTTGTTTCCTC............. 24 0 2 0.50 1 1 0 0 0 0
..........GTGCAATGGTAGCCTCTACGTTCTCCG...................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................TCCTTACATTGTCATTATATAATCTTT............................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................TAATTCCTTACATTGTCATTATATAATC.................................................................................................. 28 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................TATTCCGGTTTTCGTGATTGATTAT....................... 25 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................ATTATATAATCTTTAATAACCAGC..................................................................................... 24 0 2 0.50 1 0 1 0 0 0
.......CCTGTGCAATGGTAGCCTCTACG............................................................................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
........................................................................AACCCGCTAATTCATCGAAAATACTTTCT...................................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
.........................................CTTAACCTTCATTCGTTGTATTTCTT........................................................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0 0
............................................AACCTTCATTCGTTGTATTTCTT........................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0 0
.GAACTTCCTGTGCAATGGTAGCCTCTA............................................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
..................................CCGCATACTTAACCTTCATTCGTTGTATT............................................................................................................................................................................................ 29 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................TCCAAACAGGCTAAGCGCCCGCTTGT............................................................. 26 1 2 0.50 1 1 0 0 0 0
........CTGTGCAATGGTAGCCTCTACGTTCT......................................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.......................................................................GAACCCGCTATTTCATCGAAAATACT.......................................................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0
.........................................................................ACCCGCTAATTCATCGAAAATACTTTCT...................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
.......................................................................GAACCCGCTAATTCATCGAAAAT............................................................................................................................................................. 23 0 2 0.50 1 0 1 0 0 0
......................CCTCTACGTTCTCCGCATACTTAACCT.......................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................TTGTCATTATATAATCTTTAAT............................................................................................ 22 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................TCCGTTTTCGTGATTGATTATTTGT................... 25 2 2 0.50 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004954:5063778-5064028 + dwi_3787 TCTTGAAGGACACGTTACCATCGGAGATGCAAGAGGCGTATGAATTGGAAGTAAGCAACATAAAGAAGCTACTTGGGCGATTAAGTAGCTTTTATGAAAGAAACGGAATCAATCAGGACATGTCAATTAAGGAATGTAACAGTAATATATTAGAAATTATTGGTCGGTTTGTCCGATTCGCGGGCGAACAATATTTAAATGTAATAAGGCCAAAAGCACTAACTAATAAACAAAGGAGACAGGGGCTTATT
droAna3 scaffold_13228:588818-588851 - T--------------------------------------------------------------------------------------------------------------------------CAATTTAGGAACGTAATATTATTATTTTAGAAA-----------------------------------------------------------------------------------------------
droRho1 scf7180000760820:1893-1940 - A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTGAAATGTAATAAAACTATAAAAAAAAACAAATAAACAAAAAA--------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TCTTGAAGGACACGTTACCATCGGAGATGCAAGAGGCGTATGAATTGGAAGTAAGCAACATAAAGAAGCTACTTGGGCGATTAAGTAGCTTTTATGAAAGAAACGGAATCAATCAGGACATGTCAATTAAGGAATGTAACAGTAATATATTAGAAATTATTGGTCGGTTTGTCCGATTCGCGGGCGAACAATATTTAAATGTAATAAGGCCAAAAGCACTAACTAATAAACAAAGGAGACAGGGGCTTATTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................ATGTCAATTAAGGAATGTAACAGTAAT.........................................................................................................2721.00202000
.....................CGGAGATGCAAGAGGCGTATGA................................................................................................................................................................................................................2221.00202000
..........................................................................................................................................................................................................................CTAACTAATAAACAAAGGAGAC...........2221.00201100
...................ATCGGAGATGCAAGAGGCGTAT..................................................................................................................................................................................................................2221.00220000
....................................................................................................................................................................................CGGGCGAACAATATTTAAATGTAA...............................................2430.67202000
........................................................AACATAAAGAAGCTACTTGGGCGA...........................................................................................................................................................................2470.57404000
....................................................................................................................................................................................................AAATGTAATAAGGCCAAAAGCAC................................2320.50100100
.......................................................................................................................................................................................................................GCACTAACTAATAAACAAAGGAG.............2320.50100100
...........................................................................................................................................................................................................................TAACTAATAAACAAAGGAGACAGGGG......2620.50101000
......................GGAGATGCAAGAGGCGTATGA................................................................................................................................................................................................................2120.50101000
..............................................................................................................AATCAGGACATGTCAATTAAGGA......................................................................................................................2320.50101000
...TGAAGGACACGTTACCATCGGAGATG..............................................................................................................................................................................................................................2620.50101000
.....................................................................................................................................................TTAGAAATTATTGGTCGGTTTG................................................................................2220.50101000
.........................................................................TGGGCGATTAAGTAGCTTTTATG...........................................................................................................................................................2320.50101000
.....................................................................................................................................................................................................................................ACAAAGGAGACAGGGGCTTATT2220.50100100
.................CCATCGGAGATGCAAGAGGCGT....................................................................................................................................................................................................................2220.50101000
................................................................................................................................AAGGAATGTAACAGTAATATATTA...................................................................................................2420.50101000
...TGAAGGACACGTTACCATCGGAGA................................................................................................................................................................................................................................2420.50100010
......................................................................................................................................................................................................................AGCACTAACTAATAAACAAAGGAGACAG.........2820.50101000
...TGAAGGACACGTTACCATCGGAGATGC.............................................................................................................................................................................................................................2720.50100010
.......................................................................................................................................................................................................................GCACTAACTAATAAACAAAGGAGACAG.........2720.50100010
.......................................................................................................................................................................................................................GCACTAACTAATAAACAAAGGAGA............2420.50101000
.................CCATCGGAGATGCAAGAGGC......................................................................................................................................................................................................................2020.50100010
...............................................................................................................................................................................................................................TAATAAACAAAGGAGACAGGGGC.....2320.50101000
..TTGAAGGACACGTTACCATCGGAG.................................................................................................................................................................................................................................2420.50100001
.........................................................................TGGGCGATTAAGTAGCTTTTATGAAAG.......................................................................................................................................................2720.50101000
................................................................................................................................................................................................................................AATAAACAAAGGAGACAGGGGCTT...2420.50101000
.........................................................ACATAAAGAAGCTACTTGGGCGA...........................................................................................................................................................................2370.43303000
.........................................................ACATAAAGAAGCTACTTGGGCG............................................................................................................................................................................2270.43303000
.....................................................................................................................................................................................GGGCGAACAATATTTAAATGTAATA.............................................2530.33101000
.................................................................................................AAGAAACGGAATCAATCAGGACAT..................................................................................................................................2460.33202000
............................................................................................................TCAATCAGGACATGTCAATT...........................................................................................................................2030.33101000
......................................................GCAACATAAAGAAGCTACTTGGGCGA...........................................................................................................................................................................2630.33101000
......................................................GCAACATAAAGAAGCTACTTGGG..............................................................................................................................................................................2330.33101000
.........................................................ACATAAAGAAGCTACTTGGGC.............................................................................................................................................................................2170.29202000
........................................................AACATAAAGAAGCTACTTGGGCG............................................................................................................................................................................2370.29202000
.........................................................ACATAAAGAAGCTACTTGG...............................................................................................................................................................................1980.25202000
....................................................................................................................................................................................CGGGCGAACAATATTTAAAT...................................................2040.25110000
.....................................................................................................AACGGAATCAATCAGGAC....................................................................................................................................18120.25312000
...........................................................................................TTATGAAAGAAACGGAATCAATC.........................................................................................................................................2350.20100010
...............................................................................................GAAAGAAACGGAATCAATCAGGACA...................................................................................................................................2550.20101000
...............................................................................ATTAAGTAGCTTTTATGAAAGA......................................................................................................................................................2250.20101000
.................................................................................................AAGAAACGGAATCAATCAGGACA...................................................................................................................................2360.17101000
.........................................................ACATAAAGAAGCTACTTGGG..............................................................................................................................................................................2070.14101000
........................................................AACATAAAGAAGCTACTTGGG..............................................................................................................................................................................2170.14100010
.......................................................CAACATAAAGAAGCTACTTGG...............................................................................................................................................................................2170.14101000
.........................................................ACATAAAGAAGCTACTTGGGT.............................................................................................................................................................................2180.13101000
...........................................................ATAAAGAAGCTACTTGGGC.............................................................................................................................................................................1980.13100001
.......................................................................................................................................................................TTTGTCCGATTCGCGGGCGA................................................................2090.11101000
droAna3
T--------------------------------------------------------------------------------------------------------------------------CAATTTAGGAACGTAATATTATTATTTTAGAAA-----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droRho1
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTGAAATGTAATAAAACTATAAAAAAAAACAAATAAACAAAAAA--------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 08:18 AM