ID:

dwi_3779

 Coordinate:

scf2_1100000004954:5044434-5044584 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dwil_GLEANR_6650:1]; CDS [Dwil\GK23330-cds]; intron [Dwil\GK23330-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGAAGTCCATCGAAGAGATTGGTGGTACCACAAGGCAGGCCAATGCGATGGTTTTATTTAAAAACTTAAAAAATTTCAAAGGCTTTCCCTTTGTGGAAAATAATTTTTTATTATTATAAAAAATTTGAGACATTTGCTTTTTATTTAATGTTTGTGAATTTTTTAAGAATTTTTATTGCCGATACGGATAGTCTCAGTTCAATTTTTGCCCGTGTGATAAAACAACATTAAGACAATATGTGTGAAAATTT
**************************************************..............((((((((((((((((((.....))))))........((((((((((....))))))))))..(((((((............)))))))..)))))))))))).......(((((((...))).)))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
.................ATTGGTGGTACCACAAGGCAGG.................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0
.............................................................................................................................................................................................................TTGCCCGTGTGATAAAACAA.......................... 20 0 3 0.33 1 0 0 1 0
.....................................................................................................................................................................................................TTCAATTTTTGCCCGTGTGA.................................. 20 0 3 0.33 1 1 0 0 0
...............................................................................................................................................................................................TCTCAGTTCAATTTTTGCCCGT...................................... 22 0 3 0.33 1 1 0 0 0
.............................................................................................................................................................................................AGTCTCAGTTCAATTTTTGCCCGTG..................................... 25 0 3 0.33 1 1 0 0 0
...............................................................................................................................................................................................TCTCAGTTCAATTTTTGCCCGTGTGA.................................. 26 0 3 0.33 1 0 1 0 0
.......................................................................................................................................................................................ACGGATAGTCTCATTTCAATT............................................... 21 1 7 0.14 1 0 1 0 0
......................................................................................................................................................................................TACGGATAGTCTCAGTTCAAT................................................ 21 0 7 0.14 1 1 0 0 0
...........................................................................................................................................................................................ATAGTCTCAGTTCAATTTTTG........................................... 21 0 10 0.10 1 1 0 0 0
.............................ACAAGGCACGTCAATTCGAT.......................................................................................................................................................................................................... 20 3 12 0.08 1 0 1 0 0
...........................................................................................AGTGGAAAATAATTTTTT.............................................................................................................................................. 18 1 16 0.06 1 0 0 0 1

Anti-sense strand reads

ACTTCAGGTAGCTTCTCTAACCACCATGGTGTTCCGTCCGGTTACGCTACCAAAATAAATTTTTGAATTTTTTAAAGTTTCCGAAAGGGAAACACCTTTTATTAAAAAATAATAATATTTTTTAAACTCTGTAAACGAAAAATAAATTACAAACACTTAAAAAATTCTTAAAAATAACGGCTATGCCTATCAGAGTCAAGTTAAAAACGGGCACACTATTTTGTTGTAATTCTGTTATACACACTTTTAAA
**************************************************..............((((((((((((((((((.....))))))........((((((((((....))))))))))..(((((((............)))))))..)))))))))))).......(((((((...))).)))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body		 V119
head
...............................................................................................................................................................................AACGGCTATGCCTATCAGAGTCAAGT.................................................. 26 0 1 4.00 4 4 0 0 0 0
..............................GTTCCGTCCGGTTACGCTACCAAAAT................................................................................................................................................................................................... 26 0 2 3.00 6 6 0 0 0 0
................................................................................................................................................................................ACGGCTATGCCTATCAGAGTCAAGT.................................................. 25 0 1 3.00 3 3 0 0 0 0
................................TCCGTCCGGTTACGCTACCAAAATAAAT............................................................................................................................................................................................... 28 0 2 2.50 5 5 0 0 0 0
...TCAGGTAGCTTCTCTAACCACCATGGT............................................................................................................................................................................................................................. 27 0 2 2.50 5 5 0 0 0 0
................................................................................................................................................................................................................GGGCACACTATTTTGTTGTAATTCTGT................ 27 0 2 2.00 4 4 0 0 0 0
.....................................................................................................................................................................TCTTAAAAATAACGGCTATGCCTAT............................................................. 25 0 1 2.00 2 2 0 0 0 0
...............................................................................................................................................................................................AGAGTCAAGTTAAAAACGGGCACAC................................... 25 0 3 1.67 5 5 0 0 0 0
...TCAGGTAGCTTCTCTAACCACCATGGTGT........................................................................................................................................................................................................................... 29 0 2 1.50 3 2 0 1 0 0
....CAGGTAGCTTCTCTAACCACCATGGT............................................................................................................................................................................................................................. 26 0 2 1.00 2 2 0 0 0 0
..TTCAGGTAGCTTCTCTAACCACCAT................................................................................................................................................................................................................................ 25 0 2 1.00 2 2 0 0 0 0
...................................GTCCGGTTACGCTACCAAAATAAAT............................................................................................................................................................................................... 25 0 2 1.00 2 1 1 0 0 0
......GGTAGCTTCTCTAACCACCATGGTGT........................................................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
...........................................................................................................................................................................................................................TTTGTTGTAATTCTGTTATACACACTT..... 27 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................CGGCTATGCCTATCAGAGTCAAGT.................................................. 24 0 2 1.00 2 2 0 0 0 0
..................................CGTCCGGTTACGCTACCAAAATAAAT............................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
.........AGCTTCTCTAACCACCATGGTGTTCCGT...................................................................................................................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0
.................................................................................................................................................................................CGGCTATGCCTATCAGAGTCAAGTTAA............................................... 27 0 2 1.00 2 2 0 0 0 0
....CAGGTAGCTTCTCTAACCACCATGGTGT........................................................................................................................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0
................................TCCGTCCGGTTACGCTACCAAAAT................................................................................................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
.........................................................................................................................................................................AAAAATAACGGCTATGCCTATCAGAGT....................................................... 27 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................CAGAGTCAAGTTAAAAACGGGCACAC................................... 26 0 3 0.67 2 2 0 0 0 0
.................................................................................................................................................................................................AGTCAAGTTAAAAACGGGCACACTA................................. 25 0 3 0.67 2 2 0 0 0 0
...............................................................................................................................................................................................TTAGTCAAGTTAAAAACGGGCACACTAT................................ 28 2 3 0.67 2 2 0 0 0 0
................................TCCGTCCGGTTACGCTACCAAAATA.................................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................TTAAACTCTGTAAACGAAAAATAAAT........................................................................................................ 26 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................CGGCTATGCCTATCAGAGT....................................................... 19 0 2 0.50 1 1 0 0 0 0
...ATAGGTAGCTTCTCTAACCACCATGGTGT........................................................................................................................................................................................................................... 29 2 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................TGGGCACACTATTTTGTTGTAATTCTGTC............... 29 2 2 0.50 1 1 0 0 0 0
..................................................................................................................................GTAAACGAAAAATAAATTA...................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
.....AGGTAGCTTCTCTAACCACCATGGTGT........................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.........AGCTTCTCTAACCACCATGGTGT........................................................................................................................................................................................................................... 23 0 2 0.50 1 0 0 1 0 0
...TCAGGTAGCTTCTCTAACCACCAT................................................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
..............................GTTCCGTCCGGTTACTCTACCAAAAT................................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
...............TCTAACCACCATGGTGTTCCGTCCGGT................................................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
.......................CCATGGTGTTCCGTCCGGTTACGC............................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
.............................TGTTCCGTCCGGTTACGCTACCAAAA.................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.......................TCAGGGTGTTCCGTCCGGTTACGCTAC......................................................................................................................................................................................................... 27 2 2 0.50 1 1 0 0 0 0
......GGTAGCTTCTCTAACCACCAT................................................................................................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0
........................................................................................................................TTTAAACTCTGTAAACGAAAAATAAAT........................................................................................................ 27 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................TGCCTATCAGAGTCAAGTTAAAAA............................................ 24 0 6 0.50 3 1 0 0 1 1
..TTCAGGTAGCTTCTCTAACCACCA................................................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
....CAGGTAGCTTCTCTAACCACCATGTGT............................................................................................................................................................................................................................ 27 3 2 0.50 1 1 0 0 0 0
........TAGCTTCTCTAACCACCATGGTGTT.......................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
........................CATGGTGTTCCGTCCGGTTACGC............................................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................AAAAATAAATTACAAACACTTAAAAAAT...................................................................................... 28 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................AAGTTAAAAACGGGCACACTATTTTGT........................... 27 0 2 0.50 1 1 0 0 0 0
.............TCTCTAACCACCATGGTGTTCCGT...................................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
......................................................................................................TAAAAAATAATAATATTTTTTAAACTCT......................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0
..............CTCTAACCACCATGGTGTTCCGTCCG................................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.........................ATGGTGTTCCGGCCGGTTACGCT........................................................................................................................................................................................................... 23 1 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................TATGCCTATCAGAGTCAAGTTAAAAAC........................................... 27 0 6 0.50 3 2 1 0 0 0
................CTAACCACCATGGTGTTCCGTCCGGT................................................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
......................ACCATGGTGTTCCGTCCGGTTACGC............................................................................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0
...TCAGGTAGCTTCCCTAACCACCATGGTTT........................................................................................................................................................................................................................... 29 2 2 0.50 1 1 0 0 0 0
.......GTAGCTTCTCTAACCACCATGGTGT........................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................................TCAAGTTAAAAACGGGCACACTATTTT............................. 27 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................CAATTTAAAAACGGGCACACTATTTTGT........................... 28 1 2 0.50 1 0 1 0 0 0
.................................................................................................................................TGTAAACGAAAAATAAATTACAAACACT.............................................................................................. 28 0 2 0.50 1 1 0 0 0 0
......................GCCATGGTGTTCCGTCCGGTTACGC............................................................................................................................................................................................................ 25 1 2 0.50 1 0 1 0 0 0
....................................................................................................................................................................................................CAAGTTAAAAACGGGCACACTATTTT............................. 26 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................................................TAAAAACGGGCACACTATTTTGTTGTAAT..................... 29 0 2 0.50 1 1 0 0 0 0
................................TCCGTCCGGTTACGCTACCAAAATAAATT.............................................................................................................................................................................................. 29 0 2 0.50 1 1 0 0 0 0
.................................CCGTCCGGTTACGCTACCAAAATAAAT............................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................................................GTCAAGTTAAAAACGGGCACACTATT............................... 26 0 3 0.33 1 1 0 0 0 0
..................................................................................................................................................................................................GTCAAGTTAAAAACGGGCACACTAT................................ 25 0 3 0.33 1 1 0 0 0 0
............................................................................................................................................................................................ATCAGAGTCAAGTTAAAAACGGGCACAC................................... 28 0 3 0.33 1 1 0 0 0 0
............................................................................................................................................................................................................AAACGGGCACACTATTTTGTTGTAAT..................... 26 0 3 0.33 1 1 0 0 0 0
......................TCCATGGTGTTCCGTCCGGTTA............................................................................................................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0
................................................................................................................................................................................................ATGTCAAGTTAAAAACGGGCACACTAT................................ 27 2 3 0.33 1 1 0 0 0 0
..............................................................................................................................................................................................ACTAGTCAAGTTAAAAACGGGCACACTA................................. 28 3 3 0.33 1 1 0 0 0 0
....................................................................................................................ATCTTTTAAACTCTGCCAACGA................................................................................................................. 22 3 4 0.25 1 0 0 0 1 0
......................ATCATGGTGGTCCGTCCGGTTACGCTAC......................................................................................................................................................................................................... 28 2 5 0.20 1 1 0 0 0 0
......................ACCATGGTGGTCCGTCCGGTTACGCT........................................................................................................................................................................................................... 26 1 5 0.20 1 1 0 0 0 0
......................ATCATGGTGGTCCGTCCGGTTACGCT........................................................................................................................................................................................................... 26 2 5 0.20 1 1 0 0 0 0
......................................................................................................................................................................................ATGCCTATCAGAGCCAAGTTAAAAA............................................ 25 1 6 0.17 1 1 0 0 0 0
........................................................................................................................................................................................GCCTATCAGAGTCAAGTTAAAAAC........................................... 24 0 6 0.17 1 1 0 0 0 0
.....................................................................................................................................................................................TATGCCTATCAGAGTCAAGTTAAAAA............................................ 26 0 6 0.17 1 1 0 0 0 0
......................................................................................................................................................................................ATGCCTATCAGAGTCAAGTTAAAA............................................. 24 0 6 0.17 1 1 0 0 0 0
.....................................................................................................................................................................................TATGCCTATCAGAGTCAAGTTAAA.............................................. 24 0 7 0.14 1 1 0 0 0 0
.......................................................................................................................................................................................TGCCTATCAGAGTCAAGTTAA............................................... 21 0 7 0.14 1 0 1 0 0 0
.......................................................................................................................................................................................TGCCTATCAGAGTCAAGTTAAA.............................................. 22 0 7 0.14 1 1 0 0 0 0
..........................................................................................................................................................................................CTATCAGAGTCAAGTTAAAAA............................................ 21 0 9 0.11 1 1 0 0 0 0
...TCAGGTCGCTTCGCTAAC...................................................................................................................................................................................................................................... 18 2 9 0.11 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004954:5044384-5044634 + dwi_3779 TGAAGTCCATCGAAGAGATTGGTGGTACCACAAGGCAGGCCAATGCGATGGTTTTATTTAAAAACTTAAAAAATTTCAAAGGCTTTCCCTTTGTGGAAAATAATTTTTT--------------------------------------------ATTATTA------------TA-AAAAATTTGAGACATTTGCTTTTTATTTAATGTTTGTGAATTTTT--TA-----------AGAATTTTTATTGCCGATACGGATA---------GTCTCAGTTCAATTTTTGC----CCGTGTG-----------------------ATAAAACAACATTAAGACAATATGT----------------G-------------------------------------------------------TGAAAATTT
droAna3 scaffold_11591:84-93 + GT--------------------------------------------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATG
droBip1 scf7180000396512:43631-43725 + AT--------------------------------------------------TTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----------AGAATTTTTATTGGCGATACGGATG---------GTCACTGCTCAATTTTGAATTTCGCATGTG-----------------------ATAGGGCAACAGTTGAACAACATGT----------------G-------------------------------------------------------TGAAAA---
droKik1 scf7180000302592:276797-276911 + AA--------------------------------------------------AAC----------------------------------------------TATTATCCATTATTTAAAGAATACATTTTC-CTAGGTAC-TCATGTGGCGTTTTTATTT---------------------------------------------------------------------------TTAATTTTTTTCGC----------------------------------------------------------------------------------------------------------------------CGATTGGTTATCGAAAT---------------------TTTAAGTC-AAAGCTAGGATTTT
droFic1 scf7180000453839:631766-631878 + GT--------------------------------------------------TTTATTAAATAATAAATAAGAATTGATG---------CTTATCGAAATTG-----------------------------------------ATTTTGCATTTTTGATA------------T----AACTTTATTACTTTTGTTACTTTTTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTTGATTTTTTTTAAATTT
droEle1 scf7180000491021:145392-145529 - TA--------------------------------------------------TCAT-------------------------------------------------------TAAAGAAA--TAACACCTATTTTAGATAC---ATACTTTATATTCGAAA------------T-----------------------------------ATTTTGGTAATT--AA-----------AGTAATATTA----------------------------------------------------------------------------------------TACAAAAAGGATTG------------------------------TAGAA--CCAATCAGATTGATAGACCAATCTTGTACGTGTACATTACATTT
droRho1 scf7180000772077:4759-4949 + TT--------------------------------------------------ATAC-AT----------------------------------------------------TA---AAAATCAACATATAC-CACAGTACATCTTGTGGTAATTGTTTTTTATGTTTCATCATGTAAAAAT--ACAAC-----------ATTTAACGGGGGT-AATTTTT--TA-----------CGAATTTTTATTGGCGATACGGATA---------GTCACACTTAAATTTTTCTTTTACCATGTG-----------------------ATAATTCAACAATTAAACAATATGT----------------G-------------------------------------------------------GAAAAATTT
droBia1 scf7180000301495:166097-166218 + AG--------------------------------------------------GTGA-----------------------------------------------GTATGT-------ATTATTAAC-----------------------GT---------------------------AAATTTGAGAT--------------------TTGTTTGGGATTTTCA---------------------------A-GATCATA---------CTCTCAGCCCATATTTTAA--------------------------TGCATAACGTGAAGAAATAGTTGAATAGTTTATT--------G------G-------------------------------------------------------TTAAAATGT
droTak1 scf7180000414483:10642-10793 - TT--------------------------------------------------TTTT-------------------------------------------------------TAATGATTAAAAAG-----------------------TT---------------------------AAGTTTAAAGT--------------------CTTTTGACAATTTCTGAATGACAAATTTGAAAATTTTTGAA--TGACAAATTGTCAAAAGACTTTAAACTTAACTTTTAA--------------------------TCATTAAAAAAAAGCAAAAAGTAAAAAAATTACA-------------------------------------------------------------------------ATTATTT
droEug1 scf7180000409034:10682-10824 + AA--------------------------------------------------TTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------A--AA-----------AGAATTTTTATTGGCGATACGAAAA---------GTCTCAGCTCAGTTTTGGTTTT----TGTGATTTCATCCAAAATTTCATCCAAAAATATTATAATATAAAAAAAAAACACGTTTTGCGGTGTATACGATAACTGGTCACTGAA----------------------------------------------
droYak3 v2_chr2L_random_001:392361-392422 - TT--------------------------------------------------CGAG---------------------------------------AAAA--------------------------------------------ATATTTTTCTATCGTTA------------TA-AATTGATCAATTCGTTTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAAAAAATGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGAAGTCCATCGAAGAGATTGGTGGTACCACAAGGCAGGCCAATGCGATGGTTTTATTTAAAAACTTAAAAAATTTCAAAGGCTTTCCCTTTGTGGAAAATAATTTTTT--------------------------------------------ATTATTA------------TA-AAAAATTTGAGACATTTGCTTTTTATTTAATGTTTGTGAATTTTT--TA-----------AGAATTTTTATTGCCGATACGGATA---------GTCTCAGTTCAATTTTTGC----CCGTGTG-----------------------ATAAAACAACATTAAGACAATATGT----------------G-------------------------------------------------------TGAAAATTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................ATTGGTGGTACCACAAGGCAGG.....................................................................................................................................................................................................................................................................................................................................................................................................2220.50101000
............................................................................................................................................................................................................................................................................................TTGC----CCGTGTG-----------------------ATAAAACAA.................................................................................................2030.33100100
....................................................................................................................................................................................................................................................................................TTCAATTTTTGC----CCGTGTG-----------------------A.........................................................................................................2030.33101000
..............................................................................................................................................................................................................................................................................TCTCAGTTCAATTTTTGC----CCGT....................................................................................................................................2230.33101000
...................................................................................................................................................................................................................................................................A---------GTCTCAGTTCAATTTTTGC----CCGTG...................................................................................................................................2530.33101000
..............................................................................................................................................................................................................................................................................TCTCAGTTCAATTTTTGC----CCGTGTG-----------------------A.........................................................................................................2630.33100010
............................................................................................................................................................................................................................................................TACGGATA---------GTCTCAGTTCAAT..................................................................................................................................................2170.14101000
.................................................................................................................................................................................................................................................................ATA---------GTCTCAGTTCAATTTTTG.............................................................................................................................................21100.10101000
droAna3
GT--------------------------------------------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AT--------------------------------------------------TTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----------AGAATTTTTATTGGCGATACGGATG---------GTCACTGCTCAATTTTGAATTTCGCATGTG-----------------------ATAGGGCAACAGTTGAACAACATGT----------------G-------------------------------------------------------TGAAAA---SizeHit CountTotal NormTotal
No Reads
droKik1
AA--------------------------------------------------AAC----------------------------------------------TATTATCCATTATTTAAAGAATACATTTTC-CTAGGTAC-TCATGTGGCGTTTTTATTT---------------------------------------------------------------------------TTAATTTTTTTCGC----------------------------------------------------------------------------------------------------------------------CGATTGGTTATCGAAAT---------------------TTTAAGTC-AAAGCTAGGATTTTSizeHit CountTotal NormTotal
No Reads
droFic1
GT--------------------------------------------------TTTATTAAATAATAAATAAGAATTGATG---------CTTATCGAAATTG-----------------------------------------ATTTTGCATTTTTGATA------------T----AACTTTATTACTTTTGTTACTTTTTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTTGATTTTTTTTAAATTTSizeHit CountTotal NormTotal
No Reads
droEle1
TA--------------------------------------------------TCAT-------------------------------------------------------TAAAGAAA--TAACACCTATTTTAGATAC---ATACTTTATATTCGAAA------------T-----------------------------------ATTTTGGTAATT--AA-----------AGTAATATTA----------------------------------------------------------------------------------------TACAAAAAGGATTG------------------------------TAGAA--CCAATCAGATTGATAGACCAATCTTGTACGTGTACATTACATTTSizeHit CountTotal NormTotal
No Reads
droRho1
TT--------------------------------------------------ATAC-AT----------------------------------------------------TA---AAAATCAACATATAC-CACAGTACATCTTGTGGTAATTGTTTTTTATGTTTCATCATGTAAAAAT--ACAAC-----------ATTTAACGGGGGT-AATTTTT--TA-----------CGAATTTTTATTGGCGATACGGATA---------GTCACACTTAAATTTTTCTTTTACCATGTG-----------------------ATAATTCAACAATTAAACAATATGT----------------G-------------------------------------------------------GAAAAATTTSizeHit CountTotal NormTotal
No Reads
droBia1
AG--------------------------------------------------GTGA-----------------------------------------------GTATGT-------ATTATTAAC-----------------------GT---------------------------AAATTTGAGAT--------------------TTGTTTGGGATTTTCA---------------------------A-GATCATA---------CTCTCAGCCCATATTTTAA--------------------------TGCATAACGTGAAGAAATAGTTGAATAGTTTATT--------G------G-------------------------------------------------------TTAAAATGTSizeHit CountTotal NormTotal
No Reads
droTak1
TT--------------------------------------------------TTTT-------------------------------------------------------TAATGATTAAAAAG-----------------------TT---------------------------AAGTTTAAAGT--------------------CTTTTGACAATTTCTGAATGACAAATTTGAAAATTTTTGAA--TGACAAATTGTCAAAAGACTTTAAACTTAACTTTTAA--------------------------TCATTAAAAAAAAGCAAAAAGTAAAAAAATTACA-------------------------------------------------------------------------ATTATTTSizeHit CountTotal NormTotal
No Reads
droEug1
AA--------------------------------------------------TTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------A--AA-----------AGAATTTTTATTGGCGATACGAAAA---------GTCTCAGCTCAGTTTTGGTTTT----TGTGATTTCATCCAAAATTTCATCCAAAAATATTATAATATAAAAAAAAAACACGTTTTGCGGTGTATACGATAACTGGTCACTGAA----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
TT--------------------------------------------------CGAG---------------------------------------AAAA--------------------------------------------ATATTTTTCTATCGTTA------------TA-AATTGATCAATTCGTTTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAAAAAATGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads

Generated: 05/18/2015 at 08:11 AM