ID:

dwi_3752

 Coordinate:

scf2_1100000004954:4140889-4141039 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.5 -12.3 -12.0 -11.9

Flybase annnotation

CDS [Dwil\GK22935-cds]; exon [dwil_GLEANR_6203:2]; intron [Dwil\GK22935-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------###############################-------------------
AACAACACAGCAAAACATAGGAAATTTACTTATTGCTCCAAATAGAACCCAGACCCGGAATATCTAGTTGTTGCCTAAGTTATCCTGTAAAGTGTAGTCTACCCGTATCCTATACTAAATATTGTTTTGAATATTAAATATTATATAGTTACAACATATGTATGTTGGCACCTATTTTTAATATTTCTAATTATAATTTAGAATAAGTATGTTCAGCATCTATCATGGATAAATGTATCATGTAAAATAAA
**************************************************************************************((.....((.(((.((.(((((.....((((.(((.(((((........))))).))).))))......)))))...)).)))))..))**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
.............................................................................................................................................................................................................AGTATGTTCAGCATCTATCATGG....................... 23 0 1 4.00 4 4 0 0 0
.............................................................................................................................................................................................................AGTATGTTCAGCATCTATCATGGA...................... 24 0 1 3.00 3 2 1 0 0
......................................................................................GTAAAGTGTAGTCTACCCGTATCC............................................................................................................................................. 24 0 1 2.00 2 2 0 0 0
.............................................................................................................................................................................................................AGTATGTTCAGCATCTATCATGGAT..................... 25 0 1 2.00 2 2 0 0 0
.........................................ATAGAACCCAGACCCGGAATATC........................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0
...............................ATTGCTCCAAATAGAACCCAGACCCGGAA............................................................................................................................................................................................... 29 0 1 2.00 2 0 0 2 0
.................................................................................ATCCTGTAAAGTGTAGTCTACCCG.................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0
.....................................CCAAATAGAACCCAGACCCGGAATATC........................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
......................AATTTACTTATTGCTCCAAATAGA............................................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0
........................................................................................................................................................AACATATGTATGTTGGCACCTAT............................................................................ 23 0 1 1.00 1 1 0 0 0
....................................................................................................................................................TTACAACATATGTATGTTGGCACCTATT........................................................................... 28 0 1 1.00 1 1 0 0 0
..................................................AGACCCGGAATATCTAGTTGTTGC................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
................................................................................................................................................................................................................ATGTTCAGCATCTATAATGGATAAATG................ 27 1 1 1.00 1 1 0 0 0
................................................................................TATCCTGTAAAGTGTAGTCTACCC................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
........................................................................GCCTAAGTTATCCTGTAAAGTGTAGTC........................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0
..........................TACTTATTGCTCCAAATAGA............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
......................................................................................................CCGTATCCTATACTAAATATTGTT............................................................................................................................. 24 0 1 1.00 1 1 0 0 0
...............................................................................TTATCCTGTAAAGTGTAGTCTA...................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
...............................................................................TTATCCTGTAAAGTGTAGTCTACCCGTA................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0
...............................................................................TTATCCTGTAAAGTGTAGTCTACCC................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.....................................................................................TGTAAAGTGTAGTCTACCCGTATCT............................................................................................................................................. 25 1 1 1.00 1 0 0 0 1
.........................................................................................................................................................................................................................ATCTATCATGGATAAATGTATCATG......... 25 0 1 1.00 1 1 0 0 0
..........................................................................................AGTGTAGTCTAACCGTATCCTAT.......................................................................................................................................... 23 1 1 1.00 1 1 0 0 0
........................................................................GCCTAAGTTATCCTGTAAAGTGTAG.......................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.................................................CAGACCCGGAATATCTAGTTGTTGC................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
...........................................................................TAAGTTATCCTGTAAAGTGTAG.......................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0
........................................................GGAATATCTAGTTGTTGCCTAAGTTA......................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
....................................................ACCCGGAATATCTAGTTGTTGCCT............................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
.........................................................GAATATCTAGTTGTTGCCTAAGT........................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................TGTTCAGCATCTATCATGGATAAATG................ 26 0 1 1.00 1 0 1 0 0
.....................................................................................TGTAAAGTGTAGTCTACCCGTATCCTA........................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
...............................ATTGCTCCAAATAGAACCCAGAC..................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
........................................................................GCCTAAGTTATCCTGTAAAGTGTA........................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
............................................................TATCTAGTTGTTGCCTAAGTTATCCTG.................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................................AGTATGTTCAGCATCTATCATGGATAA................... 27 0 1 1.00 1 1 0 0 0
................................................................................................................................................................TATGTTGGCACCTATTTTTAATA.................................................................... 23 0 1 1.00 1 1 0 0 0
...........................................................................................GTGTAGTCTACCCGTATCCTATA......................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
..................................GCTCCAAATAGAACCCAGACCCGG................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
........................................................................................................................................................AACATATGTATGTTGGCACCTATTTTT........................................................................ 27 0 1 1.00 1 1 0 0 0
................................................................................TATCCTGTAAAGTGTAGTCTACCCGT................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................GTATGTTCAGCATCTATCATGGA...................... 23 0 1 1.00 1 1 0 0 0
...............................................................................................................................................TATAGTTACAACATATGTATGTTGGC.................................................................................. 26 0 1 1.00 1 1 0 0 0
..................................................................................TCCTGTAAAGTGTAGTCTACCCGT................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
........................................................GGAATATCTAGTTGTTGCCTAAGT........................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
........................TTTACTTATTGCTCCAAATAGAACCCAGA...................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0
..............................................................................GTTATCCTGTAAAGTGTAGTCTACCCG.................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0
...........................................................................................................TCCTATACTAAATATTGTTTTGAATA...................................................................................................................... 26 0 1 1.00 1 1 0 0 0
..........................TACTTATTGCTCCAAATAGAACCCAGA...................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
......................AATTTACTTATTGCTCCAAATAGAAC........................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
..........................................................................CTAAGTTATCCTGTAAAGTGT............................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0
..................................GCTCCAAATAGAACCCAGACCCG.................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
...............................................................................TTATCCTGTAAAGTGTAGTCTGCCC................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0
.........GGAAAACATAGGAGATGTACT............................................................................................................................................................................................................................. 21 3 3 0.33 1 1 0 0 0
..................................................................GTTCTGGCCTAAGTTATC....................................................................................................................................................................... 18 2 5 0.20 1 0 0 1 0

Anti-sense strand reads

TTGTTGTGTCGTTTTGTATCCTTTAAATGAATAACGAGGTTTATCTTGGGTCTGGGCCTTATAGATCAACAACGGATTCAATAGGACATTTCACATCAGATGGGCATAGGATATGATTTATAACAAAACTTATAATTTATAATATATCAATGTTGTATACATACAACCGTGGATAAAAATTATAAAGATTAATATTAAATCTTATTCATACAAGTCGTAGATAGTACCTATTTACATAGTACATTTTATTT
****************************************************************************((.....((.(((.((.(((((.....((((.(((.(((((........))))).))).))))......)))))...)).)))))..))************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body		 V119
head
..........................................................................................TCACATCAGATGGGCATAGGATATGAT...................................................................................................................................... 27 0 1 29.00 29 23 6 0 0 0
..................................................................................AGGACATTTCACATCAGATGGGCAT................................................................................................................................................ 25 0 1 27.00 27 12 15 0 0 0
.............................................................................................................................................................................................................TCATACAAGTCGTAGATAGTACCTAT.................... 26 0 1 26.00 26 13 4 9 0 0
..............................................................AGATCAACAACGGATTCAATAGGACAT.................................................................................................................................................................. 27 0 1 25.00 25 19 6 0 0 0
.........................................................................................TTCACATCAGATGGGCATAGGATAT......................................................................................................................................... 25 0 1 22.00 22 16 6 0 0 0
.....................................GGTTTATCTTGGGTCTGGGCCTTAT............................................................................................................................................................................................. 25 0 1 17.00 17 13 4 0 0 0
...........................................................................................CACATCAGATGGGCATAGGATATGAT...................................................................................................................................... 26 0 1 15.00 15 7 7 0 1 0
..................................................................CAACAACGGATTCAATAGGACATT................................................................................................................................................................. 24 0 1 13.00 13 9 4 0 0 0
............................................................................................ACATCAGATGGGCATAGGATATGAT...................................................................................................................................... 25 0 1 13.00 13 13 0 0 0 0
..GTTGTGTCGTTTTGTATCCTTTAAAT............................................................................................................................................................................................................................... 26 0 1 11.00 11 9 2 0 0 0
.....................................................................CAACGGATTCAATAGGACATTTCACAT........................................................................................................................................................... 27 0 1 11.00 11 3 8 0 0 0
.........................................................................................TTCACATCAGATGGGCATAGGATATGAT...................................................................................................................................... 28 0 1 10.00 10 7 1 0 2 0
.............................................................................TCAATAGGACATTTCACATCAGAT...................................................................................................................................................... 24 0 1 9.00 9 5 4 0 0 0
..................................................................CAACAACGGATTCAATAGGACAT.................................................................................................................................................................. 23 0 1 9.00 9 6 3 0 0 0
..........................................................................................TCACATCAGATGGGCATAGGATAT......................................................................................................................................... 24 0 1 9.00 9 8 1 0 0 0
.............................................................................................................................................................................................TAATATTAAATCTTATTCATACAAGT.................................... 26 0 1 8.00 8 8 0 0 0 0
.....................................................................................ACATTTCACATCAGATGGGCATAGGAT........................................................................................................................................... 27 0 1 7.00 7 2 5 0 0 0
.TGTTGTGTCGTTTTGTATCCTT.................................................................................................................................................................................................................................... 22 0 1 7.00 7 4 3 0 0 0
......................................................GGCCTTATAGATCAACAACGGATTCAAT......................................................................................................................................................................... 28 0 1 7.00 7 7 0 0 0 0
...TTGTGTCGTTTTGTATCCTTTAAAT............................................................................................................................................................................................................................... 25 0 1 7.00 7 6 1 0 0 0
................................AACGAGGTTTATCTTGGGTCTGGGCCT................................................................................................................................................................................................ 27 0 1 6.00 6 6 0 0 0 0
...................................GAGGTTTATCTTGGGTCTGGGCCTT............................................................................................................................................................................................... 25 0 1 6.00 6 5 1 0 0 0
.......................................................GCCTTATAGATCAACAACGGATTCAAT......................................................................................................................................................................... 27 0 1 6.00 6 6 0 0 0 0
.............................................................................................CATCAGATGGGCATAGGATATGAT...................................................................................................................................... 24 0 1 6.00 6 1 5 0 0 0
....TGTGTCGTTTTGTATCCTTTAAAT............................................................................................................................................................................................................................... 24 0 1 6.00 6 4 1 0 1 0
.........................................TATCTTGGGTCTGGGCCTTATAGAT......................................................................................................................................................................................... 25 0 1 6.00 6 3 3 0 0 0
.........................................................................................................................................................TGTATACATACAACCGTGGATAAAAAT....................................................................... 27 0 1 6.00 6 5 1 0 0 0
.................................................................................TAGGACATTTCACATCAGATGGGCAT................................................................................................................................................ 26 0 1 6.00 6 1 5 0 0 0
........................................TTATCTTGGGTCTGGGCCTTATAGAT......................................................................................................................................................................................... 26 0 1 5.00 5 5 0 0 0 0
..................................................................................................................................................................ACAACCGTGGATAAAAATTATAAAGAT.............................................................. 27 0 1 5.00 5 5 0 0 0 0
...............................................................................................TCAGATGGGCATAGGATATGATTTAT.................................................................................................................................. 26 0 1 5.00 5 4 0 1 0 0
..........................................................................................TCACATCAGATGGGCATAGGATATGA....................................................................................................................................... 26 0 1 5.00 5 5 0 0 0 0
..............................................................................................ATCAGATGGGCATAGGATATGATTT.................................................................................................................................... 25 0 1 4.00 4 3 1 0 0 0
.............................................................................................................................................................................................................TCATACAAGTCGTAGATAGTACCTATT................... 27 0 1 4.00 4 3 1 0 0 0
....................................................................................................TGGGCATAGGATATGATTTATAAC............................................................................................................................... 24 0 1 4.00 4 2 2 0 0 0
.................................................................................................................................................................................................................ACAAGTCGTAGATAGTACCTATTTACAT.............. 28 0 1 4.00 4 4 0 0 0 0
................................................................................................CAGATGGGCATAGGATATGATTT.................................................................................................................................... 23 0 1 4.00 4 1 3 0 0 0
.............................................................................................................................................................................................TAATATTAAATCTTATTCATACAAGTCGT................................. 29 0 1 4.00 4 4 0 0 0 0
.................................ACGAGGTTTATCTTGGGTCTGGGCCT................................................................................................................................................................................................ 26 0 1 4.00 4 0 4 0 0 0
.................................................................................AAGGACATTTCACATCAGATGGGCAT................................................................................................................................................ 26 1 1 4.00 4 1 3 0 0 0
....................................................................................GACATTTCACATCAGATGGGCATAGGAT........................................................................................................................................... 28 0 1 4.00 4 3 0 0 1 0
...................................................CTGGGCCTTATAGATCAACAACGGAT.............................................................................................................................................................................. 26 0 1 4.00 4 4 0 0 0 0
.......GTCGTTTTGTATCCTTTAAATGAAT........................................................................................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0
...................................GAGGTTTATCTTGGGTCTGGGCCT................................................................................................................................................................................................ 24 0 1 3.00 3 3 0 0 0 0
.......................................................................ACGGATTCAATAGGACATTTCACAT........................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0
....................................AGGTTTATCTTGGGTCTGGGCCTTAT............................................................................................................................................................................................. 26 0 1 3.00 3 1 2 0 0 0
.................................................................................................................................................................................................ATTAAATCTTATTCATACAAGTCGT................................. 25 0 1 3.00 3 3 0 0 0 0
.........................................................................................TTCACATCAGATGGGCATAGGAT........................................................................................................................................... 23 0 1 3.00 3 3 0 0 0 0
...................................................................AACAACGGATTCAATAGGACATTTCACAT........................................................................................................................................................... 29 0 1 3.00 3 3 0 0 0 0
...........................................................................ATTCAATAGGACATTTCACATCAGAT...................................................................................................................................................... 26 0 1 3.00 3 2 1 0 0 0
.............................................................................TCAATAGGACATTTCACATCAGA....................................................................................................................................................... 23 0 1 3.00 3 2 1 0 0 0
.........................................................CTTATAGATCAACAACGGATTCAAT......................................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0
........................................................................................................................................TTATAATATATCAATGTTGTATACAT......................................................................................... 26 0 1 3.00 3 3 0 0 0 0
.......................................................................................ATTTCACATCAGATGGGCATAGGAT........................................................................................................................................... 25 0 1 3.00 3 1 2 0 0 0
..................................................................CAACAACGGATTCAATAGGACATTTCAC............................................................................................................................................................. 28 0 1 3.00 3 2 1 0 0 0
......................................................................AACGGATTCAATAGGACATTTCACAT........................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0
....................................AGGTTTATCTTGGGTCTGGGCCT................................................................................................................................................................................................ 23 0 1 3.00 3 2 1 0 0 0
........................................................................................TTTCACATCAGATGGGCATAGGATAT......................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0
..................................CGAGGTTTATCTTGGGTCTGGGCCTT............................................................................................................................................................................................... 26 0 1 3.00 3 2 1 0 0 0
...................................................................................................................................................................................................TAAATCTTATTCATACAAGTCGTAGAT............................. 27 0 1 3.00 3 3 0 0 0 0
...............................................................GATCAACAACGGATTCAATAGGACAT.................................................................................................................................................................. 26 0 1 3.00 3 2 1 0 0 0
..........................................................................................................................................................GTATACATACAACCGTGGATAAAAAT....................................................................... 26 0 1 3.00 3 3 0 0 0 0
................................................................................................CAGATGGGCATAGGATATGATTTAT.................................................................................................................................. 25 0 1 3.00 3 2 1 0 0 0
.....................................................GGGCCTTATAGATCAACAACGGATTCAAT......................................................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0
...........................................................................................CACATCAGATGGGCATAGGATATGATT..................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0
........TCGTTTTGTATCCTTTAAATGAAT........................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
........................AAATGAATAACGAGGTTTATCTTGGGT........................................................................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0
...................................................................................GGACATTTCACATCAGATGGGCATAGG............................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
.........................................................................GGATTCAATAGGACATTTCACAT........................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
..............................................................................................................................................................................................................................AGTACCTATTTACATAGTACATTTTAT.. 27 0 1 2.00 2 2 0 0 0 0
...........................................................................................................AGGATATGATTTATAACAAAACTTAT...................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
...............................................................................................TCAGATGGGCATAGGATATGAT...................................................................................................................................... 22 0 1 2.00 2 1 0 0 1 0
..........................................ATCTTGGGTCTGGGCCTTATAGAT......................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
...................................................................AACAACGGATTCAATAGGACATTTCAC............................................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
........................................................................CGGATTCAATAGGACATTTCACATCAGAT...................................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0
..............................................................AGATCAACAACGGATTCAATAGGACATT................................................................................................................................................................. 28 0 1 2.00 2 2 0 0 0 0
..................................................................CAACAACGGATTCAATAGGACATTT................................................................................................................................................................ 25 0 1 2.00 2 1 1 0 0 0
......................TTAAATGAATAACGAGGTTTATCTT............................................................................................................................................................................................................ 25 0 1 2.00 2 1 1 0 0 0
....................................................TGGGCCTTATAGATCAACAACGGATTCAA.......................................................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................................................AGATAGTACCTATTTACATAGTACATTTT.... 29 0 1 2.00 2 2 0 0 0 0
............................................................................................................................................................ATACATACAACCGTGGATAAAAATTAT.................................................................... 27 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................................................................................................TCATACAAGTCGTAGATAGTACCT...................... 24 0 1 2.00 2 2 0 0 0 0
TTGTTGTGTCGTTTTGTATCCT..................................................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
.......................................................................................ATTTCACATCAGATGGGCATAGGATAT......................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0
.............................................................................................................................................................................................................TCCTACAAGTCGTAGATAGTACCTAT.................... 26 1 1 2.00 2 0 0 2 0 0
..............................................................................................ATCAGATGGGCATAGGATATGATTTAT.................................................................................................................................. 27 0 1 2.00 2 1 1 0 0 0
...............................................................GATCAACAACGGATTCAATAGGACATT................................................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
.........................................................................................TTCACATCAGATGGGCATAGGATATGA....................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0
................................................................................................................................................................................................................................TACCTATTTACATAGTACATTTTAT.. 25 0 1 2.00 2 2 0 0 0 0
...................................GAGGTTTATCTTGGGTCTGGGCCTTAT............................................................................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
..............................................................................................................................................................ACATACAACCGTGGATAAAAATTAT.................................................................... 25 0 1 2.00 2 2 0 0 0 0
...........................................................................................................................................................................................................ATTCATACAAGTCGTAGATAGTACCTAT.................... 28 0 1 2.00 2 0 0 2 0 0
................................................................................................................................................................................................................TACAAGTCGTAGATAGTACCTAT.................... 23 0 1 2.00 2 2 0 0 0 0
..............................................................AGATCAACAACGGATTCAATAGGAC.................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
..................................CGAGGTTTATCTTGGGTCTGGGCCT................................................................................................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0
.TGTTGTGTCGTTTTGTATCCTTT................................................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
....................................................................ACAACGGATTCAATAGGACATTTCACAT........................................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0
..............................................................................................................................................................................................................CATACAAGTCGTAGATAGTACCTAT.................... 25 0 1 2.00 2 2 0 0 0 0
........................................................................................................................................................................................................CTTATTCATACAAGTCGTAGATAGT.......................... 25 0 1 2.00 2 1 0 1 0 0
.......................................................GCCTTATAGATCAACAACGGATTCAA.......................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................................TATTCATACAAGTCGTAGATAGTACCT...................... 27 0 1 2.00 2 2 0 0 0 0
...................................................................................................................................................CAATGTTGTATACATACAACCGTGGAT............................................................................. 27 0 1 2.00 2 2 0 0 0 0
....................................................TGGGCCTTATAGATCAACAACGGAT.............................................................................................................................................................................. 25 0 1 2.00 2 1 1 0 0 0
......................................GTTTATCTTGGGTCTGGGCCTTAT............................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0
............................................CTTGGGTCTGGGCCTTATAGATCAAC..................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
.................ATCCTTTAAATGAATAACGAGGTTTAT............................................................................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0
.................................................................................................AGATGGGCATAGGATATGATTT.................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
..........................................................................................TCACATCAGATGGGCATAGGATATGATT..................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0
.........................................................................GGATTCAATAGGACATTTCACATCAG........................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0
.........................................................................GGATTCAATAGGACATTTCACATCAGA....................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
......................................GTTTATCTTGGGTCTGGGCCTTA.............................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
..........................................................................................AGACATCAGATGGGCATAGGATATGAT...................................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0
TTGTTGTGTCGTTTTGTATCCTT.................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
........................................................................................TTTCACATCAGATGGGCATAGGAT........................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................................AGTACCTATTTACATAGTACATTTTA... 26 0 1 1.00 1 1 0 0 0 0
.................ATCCTTTAAATGAATAACGAGGTT.................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0
......................TTAAATGAATAACGAGGTTTATCT............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.....................................................................................................GGGCATAGGATATGATTTATAAC............................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
..............................................................................................ATCAGATGGGCATAGGATATGAT...................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................................................TCATACAAGTCGTAGATAGTACCTA..................... 25 0 1 1.00 1 1 0 0 0 0
.....................................GGTTTATCTTGGGTCTGGGCCTTA.............................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.......................................................................ACGGATTCAATAGGACATTTCACA............................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
......................................................................................CATTTCACATCAGATGGGCATAGGAT........................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
.................................................................................TAGGACATTTCACATCAGATGGGC.................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................ACCTATTTACATAGTACATTTTATT. 25 0 1 1.00 1 1 0 0 0 0
.....................................................GGGCCTTATAGATCAACAACGGATTCAA.......................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
................................AACGAGGTTTATCTTGGGTCTGGG................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0
.......................................................GCCTTATAGATCAACAACGGATTCAATC........................................................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................GTTGTATACATACAACCGTGGATAAA.......................................................................... 26 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................CTTATTCATACAAGTCGTAGATAGTACCT...................... 29 0 1 1.00 1 1 0 0 0 0
................................................................................................CAGATGGGCATAGGATATGATT..................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...........................................TCTTGGGTCTGGGCCTTATAGAT......................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.................................ACGAGGTTTATCTTGGGTCTGGGCCTT............................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
...................................................................AACAACGGATTCAATAGGACATTT................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
...........................................................................................................AGGATATGATTTATAACAAAACTT........................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
.............TTGTATCCTTTAAATGAATAACGAGGTT.................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
......................................................................................TAATTCACATCAGATGGGCATAGGATAT......................................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0
..............................................................AGATCAACAACAGATTCAATAGGACAT.................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0
TTGTTGTGTCGTTTTGTATCCTTT................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.TGTTGTGTCGTTTTGTATCCT..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................TATTAAATCTTATTCATACAAGTCGT................................. 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................TCACATCAGATGGGCGTAGGATATGAT...................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................ACAAGTCGTAGATAGTACCTATTTAC................ 26 0 1 1.00 1 1 0 0 0 0
..............................................................AGATCAACAGCGGATTCAATAGGACAT.................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................ATTCATACAAGTCGTAGATAGTACC....................... 25 0 1 1.00 1 1 0 0 0 0
..................................................TCTGGGCCTTATAGATCAACAACGGAT.............................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................AATATTAAATCTTATTCATACAAGT.................................... 25 0 1 1.00 1 1 0 0 0 0
.............................................................................TCAATAGGACATTTCACATCAGATGG.................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................TCATACAAGTCGTAGATAGTACCTGT.................... 26 1 1 1.00 1 1 0 0 0 0
.............................................................................TCAATAGGACATTTCACATCAGATGGG................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.....................................GGTTTATCTTGGGGCTGGGCCTTAT............................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0
............TTTGTATCCTTTAAATGAATAACGAGGT................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.................................................................................................AGATGGGCATAGGATATGATT..................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
........................................ATATCTTGGGTCTGGGCCTTATAGAT......................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
..GTTGTGTCGTTTTGTATCCTT.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.....................................................................................................GGGCATAGGATATGATTTATAACAAA............................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
.......................TAAATGAATAACGAGGTTTATCTTGG.......................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...........................................................................................CACATCAGATGGGCATAGGATATGATTT.................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
..............................................................AGATCAACAACGGATTCAATAGGACATTT................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0
.....................................................................................................GGGCATAGGATATGATTTATAACAA............................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
.............................................TTGGGTCTGGGCCTTATAGAT......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...........................................................TATAGATCAACAACGGATTCAAT......................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................ATTAAATCTTATTCATACAAGTCGTAGA.............................. 28 0 1 1.00 1 1 0 0 0 0
...................................................................................GGACATTTCACATCAGATGGGCAT................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
.................................................................................TAGGACATTTCACATCAGATGGGCA................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................CCATACAAGCCGTAGATAGTACCTAT.................... 26 2 1 1.00 1 0 0 1 0 0
..........................................................................GATTCAATAGGACATTTCACATCAGA....................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
..........GTTTTGTATCCTTTAAATGAATAA......................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1
................................................GGTCTGGGCCTTATAGATCAACAAC.................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................CAAGTCGTAGATAGTACCTATTTACAT.............. 27 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................CAACCGTGGATAAAAATTATAAAGAT.............................................................. 26 0 1 1.00 1 1 0 0 0 0
...................................................CTGGGCCTTATAGATCAACAACGGATT............................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.TGTTGTGTCGTTTTGTATCCTTTAAAT............................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...................CCTTTAAATGAATAACGAGGTTTAT............................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................AACAAGTCGTAGATAGAACCTATTTACA............... 28 2 1 1.00 1 1 0 0 0 0
..............................................................AGATCAACAACGGATTCAATAGGACA................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................TTCACATCAGATGGGCATAGGATATGATT..................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
...........................................................................ATTCAATAGGACATTTCACATCAGA....................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..........................................................................GATTCAATAGGACATTTCACATCAGAT...................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
...........................................................................................TACATCAGATGGGCATAGGATATGAT...................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.....................................GGTTTATCTTGGGTCTGGGCCT................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................GTTGTATACATACAACCGTGGATAAAAAT....................................................................... 29 0 1 1.00 1 1 0 0 0 0
............................................................................................ACATCAGATGGGCATAGGATATGATT..................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................GTTGTATACATACAACCGTGGAT............................................................................. 23 0 1 1.00 1 1 0 0 0 0
.........CGTTTTGTATCCTTTAAATGAATA.......................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
........................................................................CGGATTCAATAGGACATTTCACATCAG........................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
...................................GAGGTTTATCCTGGGTCTGGGCCTTA.............................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
........................................................................CGGATTCAATAGGACATTTCACATCAGA....................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................AGATAGTACCTATTTACATAGCACATTTT.... 29 1 1 1.00 1 1 0 0 0 0
................................................................ATCAACAACGGATTCAATAGGACAT.................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
............................GAATAACGAGGTTTATCTTGGGTCTG..................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................TCACATCAGATGGGCATAGGATATGATC..................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
.....................................................................................ACATTTCACATCTGATGGGCATAGGAT........................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
.............................................................TAGATCAACAACGGATTCAATAGGAC.................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.............................................................AAGATCAACAACGGATTCAATAGGACA................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
.....................................................................................TCATTTCACATCAGATGGGCATAGGA............................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0
..................................................................................AGGACATTTCACATCAGATTGGCAT................................................................................................................................................ 25 1 1 1.00 1 0 1 0 0 0
.............................AATAACGAGGTTTATCTTGGGTCT...................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................ACAAGTCGTAGATAGTACCTAT.................... 22 0 1 1.00 1 0 1 0 0 0
............................................................................................ACATCAGATGGGCATAGGATATGA....................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................ACAACCGTGGATAAAAATTATAAAGATT............................................................. 28 0 1 1.00 1 1 0 0 0 0
............................................................................................................GGATATGATTTATAACAAAACT......................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...................................................................................GGACATTTGACATCAGATGGGCATAGGA............................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0
............................................................................TTCAATAGGACATTTCACATCAGAT...................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.................................ACGAGGTTTATCTTGGGTCT...................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
............................GAATAACGAGGTTTATCTTGGGTC....................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.TGTTGTGTCGTTTTGTATCCTTTAAATG.............................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
................................................................ATCAACAACGGATTCAATAGGACATTT................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................GTACCTATTTACATAGTACATTTTAT.. 26 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................ACAACCGTGGATAAAAATTATAAAGA............................................................... 26 0 1 1.00 1 1 0 0 0 0
..GTTGTGTCGTTTTGTATCCTTT................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..................................................................CAACAACGGATTCAATAGGACA................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.............................................TTGGGTCTGGGCCTTATAGA.......................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................TACATACAACCGTGGATAAAAATTAT.................................................................... 26 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................TTCATACAAGTCGTAGATAGTACCTAT.................... 27 0 1 1.00 1 1 0 0 0 0
.................ATCCTTTAAATGAATAACGAGGTTTATCT............................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0
...............................................GGGTCTGGGCCTTATAGATCAA...................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.............................................................................................CATCAGATGGGCATAGGATATGATTT.................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
......................................................................AACGGATTCAATAGGACATTTCACA............................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
...................CCTTTAAATGAATAACGAGGTTTATG.............................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................ATTCATACAAGTCGTAGATAGTACCTATT................... 29 0 1 1.00 1 1 0 0 0 0
...............................................................................................TCAGATGGGCATAGGATATGATT..................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
................................AACGAGGTTTATCTTGCGTCTGGGCCT................................................................................................................................................................................................ 27 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................CGTAGATAGTACCTATTTACATAGT........... 25 0 1 1.00 1 1 0 0 0 0
...........................................................................................CACATCAGATGGGCATAGGATATAAT...................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
..........................ATGAATAACGAGGTTTATCTTGGGT........................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................................GTAGATAGTACCTATTTACATAGTACAT....... 28 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................AAAGATTAATATTAAATCTTATTCAT.......................................... 26 0 1 1.00 1 1 0 0 0 0
....................................AGGTTTATCTTGGGTCTGGGCCTTA.............................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
..........................................................................................TCACATCAGATGGGGATAGGATATGA....................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
..........................................................................................TCACATCAGATGGGCATAGGATA.......................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.......................TAAATGAATAACGAGGTTTATCTTGGGT........................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0
TTGTTGTGTCGTTTTGTATCC...................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................ATTAAATCTTATTCATACAAGTCGTAGAT............................. 29 0 1 1.00 1 1 0 0 0 0
...........................................................TATAGATCAACAACGGATTCAATAGGA..................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................ATATTAAATCTTATTCATACAAGTCGT................................. 27 0 1 1.00 1 1 0 0 0 0
...................................................CTGGGCCTTATAGATCAACAAC.................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................ATACATACAACCGTGGATAAAAA........................................................................ 23 0 1 1.00 1 1 0 0 0 0
............................................................................................ACATCAGATGGGCATAGGATATGATTT.................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................TTATAATATATCAATGTTGTATACA.......................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..............................................................................................ATCAGATGGGCATAGGATAT......................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................ACCTATTTACATAGTACATTTTAT.. 24 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................................................................AAGTACCTATTTACATAGTACATTTTAT.. 28 1 1 1.00 1 1 0 0 0 0
......................................GTTTATCTTGGGTCTGGGCCTT............................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................ATACATACAACCGTGGATAAAAAT....................................................................... 24 0 1 1.00 1 1 0 0 0 0
....................................................................................................TGGGCATAGGATATGATTTATAACAAA............................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
.....................................GGTTTATCTTGGGTCTGGGCCTTATAG........................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..........................ATGAATAACGAGGTTTATCTTGGGTC....................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................TTCATACAAGTCGTAGATAGTACCT...................... 25 0 1 1.00 1 1 0 0 0 0
............................................................................................TCATCAGATGGGCATAGGATATGAT...................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
..........................................................................................TCACATCAGATGGGCATAGGAT........................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
........................AAATGAATAACGAGGTTTATC.............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................ATTCATACAAGTCGTAGATAGTACCTGT.................... 28 1 1 1.00 1 1 0 0 0 0
.....................................................................................................GGGCATAGGATATGATTTATAACAAAAC.......................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
............................................................................................ACATCAGATGGGCATAGGA............................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
.................................................................................................AGATGGGCATAGGATATGATTTATAAC............................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
..............................................TGGGTCTGGGCCTTATAAATCAAC..................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
............................GAATAACGAGGTTTATCTTGGGTCT...................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................TATAATATATCAAGGTTGTATACAT......................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................TGTATACATACAACCGTGGATAAA.......................................................................... 24 0 1 1.00 1 1 0 0 0 0
..................................................................................................GATGGGCATAGGATATGATTT.................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.........................................................................................TTCACATCAGATGGGCATAGGATA.......................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
..................................................TCTGGGCCTTATAGATCAACAACGGATT............................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
..............................................TGGGTCTAGGCCTTATAGTTA........................................................................................................................................................................................ 21 3 2 0.50 1 0 0 0 1 0
..........................................ACCTTGGGTCTGCGCCCTA.............................................................................................................................................................................................. 19 3 10 0.10 1 1 0 0 0 0
..........................................................................................TGAGATCAGACGGGCATAG.............................................................................................................................................. 19 3 11 0.09 1 0 0 0 0 1
..........................................................................................TGACATCAGACGTGCATAG.............................................................................................................................................. 19 3 12 0.08 1 0 0 0 1 0
..........................................................................................TGAGATCAGATGTGCATAG.............................................................................................................................................. 19 3 15 0.07 1 0 0 0 1 0
.........................................................................................................................................................................TGGATAAAAATTAAGAAGA............................................................... 19 2 17 0.06 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004954:4140839-4141089 - dwi_3752 AACAACACAGCAAAACATAGGAAATTTACTTATTGCTCCAAATAGAACCCAGACCCGGAATATCTAGTTGTTGCCTAAGTTATCCTGTAAAGTGTAGTCTACCCGTATCCTATACTAAATATTGTTT---TGAATATT------AA-------------------------------------------ATA------TTATATAGTTACAACA--TAT--GTATGTTGG------------------------------------------------------------------------------------------------------------------------------------CACCTATTTTTAATATTTCTAATT---------------------------------ATAATTTAGAATAAGTATGTTCAGCATCTATC-------------------------------------------ATGGATAAATGTATCATGTAAAATAAA
droVir3 scaffold_12472:470344-470505 - TGT--------------------------------------------------------------------------------C------------------------CTATAA------AGTCTTTTAAACTTCTAT------CT-------------------------------------------ATA------GTATAGATATATACTATATACATTTGGGTAAGTTCATGTTTAATTAACCTTACATATTTTTATTTATA-AATAAGAATGAGTATGTGCCTCAGCACCTCAG---------------------------------------------------------------CGTTGATCTTCAAAAATC--------------------------------TAA-------------------------------------------------------------------------------------AACGTA-------------AA
droMoj3 scaffold_6500:5489615-5489762 + TAA--------------------------------------------------------------------------------A-------GTTTTGTTAAATAATATATTATGTAAAATATTATTT---TTAATTTT------AA-------------------------------------------TTAAAATAAATTTAT-------TCA--AAC--ATAAGTTGGA-----------------------------CAGAATTTTCAAAGCTTTTTATATTTCTTAGAATATTAT---------------------------------------------------------------AATCTGTATATAGCATAT----------------------------------------------------------------------------------------------------------------------AAAAATAT-------------GT
droGri2 scaffold_15126:1583821-1583912 - GTG--------------------------------------------------------------------------------T------------------------TCAACAATATATGTAAGTG---TGAATATG------AA-------------------------------------------ATA------ATATATAGATAATAGA--TAT--TTGCGTATG------------------------------------------------------------------------------------------------------------------------------------TATCTATATGCATTAATTAT----------------------------------------------------------------------------------------------------------------------AGATAT-------------AA
dp5 2:30630400-30630473 + GCA--------------------------------------------------------------------------------A------------------------CCATT-------TTTCGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTGATT---------------------------------ATAATTTAAAATATGTATAA-------------------------------------------------------ATACATAAATAAAACAAATAAAATATA
droPer2 scaffold_10:2966122-2966216 - ATT--------------------------------------------------------------------------------T------------------------TAAAG-------ATTATTA----------T--------TTGAGTTTCATTAG-----------------------------ATA------TTTTAC-------T----TAA--AAATAATTG------------------------------------------------------------------------------------------------------------------------------------TAGATATTTTTAATACTTTTTGTT---------------------------------TCAATTTAAAATT-----------------------------------------------------------------------TGT-------------AT
droAna3 scaffold_12392:79416-79542 - ATA--------------------------------------------------------------------------------T------------------------TCAAT-------ATCCATA---TAAATATT------AT-------------------------------------------TAA------TCACATTATTACATTA--CAT--ATAT--ATG------------------------------------------------------------------------------------------------------------------------------------TATACATATTACTTACATTACATTTAAATTTGATATAAGAGTATAATGTATCTTATTTATAT--------------------------------------------------------------------------ACATATGT-------------AT
droBip1 scf7180000395256:14301-14429 + TTT--------------------------------------------------------------------------------T------------------------AAAATAAAAA---TTATTT----------G--------TTGACTTTTATGACAAAAATTGAAATATAACTCTTATTTTCAATTTTTATAATAATAATTAA----------------------------------------------------------------GAATAAG---------AA------------------TTATTT-----------------------------------TT----------CAATTTTTATAAAAAAAAT---------------------------------AT-------------------------------------------------------------------------------------AAACAA-------------AA
droKik1 scf7180000302234:125181-125272 - TAT--------------------------------------------------------------------------------A------------------------TTTAA------TATTTTAA---AATATTTT------TA-------------------------------------------AAA------TTATATTTAA----------------------------------------------------------------GGTTTTA---------AA------------------ATATAT-----------------------------------TT----------GAAATTATATTTAATATTTCAAAAT---------------------------------AT-------------------------------------------------------------------------------ATTTTA-------------AA
droFic1 scf7180000452742:4961-5084 + TTC--------------------------------------------------------------------------------A------------------------AATATT------------------------------AA-------------------------------------------ATA------TTATATATATATAAAG--TAT--ATAATATAT------------------------------------------------------------------------------------------------------------------------------------TTTATATATACAACAT------------------------------------------------TATTTAAATTATTGA----------ACCAATATAACCATAACATAACATTGATTGCAAATATAGATAT-------AATAT-------------AA
droEle1 scf7180000491249:7416814-7416954 + AAT--------------------------------------------------------------------------------A------------------------TTGGCC------AGTTTT------AGTTTT------CA-------------------------------------------GGA------TTAAATTGTTTAGACA--TAT--GGACTTTGG-----------------------------------------------------------G------------------GTCTGTTTTTAATCATTTCCTTAAATTTCATATTAATATGTTTGGTTCATCTTCTTATTATATTCATTAATTTG-------------------------------------------------------TTGT------------------------------------------------------------AAATT-------------AA
droRho1 scf7180000771080:675-757 + AAG--------------------------------------------------------------------------------T------------------------ATTGTT------------T---TGAATCAA------AA-------------------------------------------GTG------ATATTTATATATAATT--TAT--TTATTTTAC------------------------------------------------------------------------------------------------------------------------------------TATTTTTGTTTTTTCAATCTAATT---------------------------------AT----------------------------------------------------------------------------------GGT-------------TT
droBia1 scf7180000297953:1397-1467 - CTA--------------------------------------------------------------------------------T------------------------ATTATA-----CATTATTA---TGCTTTTT------AG-------------------------------------------GTA------TTATACCTATAAGCCA--TAT--CCATACGAT------------------------------------------------------------------------------------------------------------------------------------CGCTTA--------------------------------------------------------------------------------------------------------------------------------------TTTT-------------TA
droTak1 scf7180000415420:89141-89276 - GTA--------------------------------------------------------------------------------T------------------------ACTAAACCAAATATTTTTA---AAAATATT------AA-------------------------------------------AAA------TAATTTACTTTCATTA--TTT--GTAG------------------------------------CTATTCTATAAATTTCATTATTTACTTAAAAACATTAGAAATGCAAAAAG--------------------------------------------------TATATTATATTAAAT---A--------------------------------TTT-------------------------------------------------------------------------------------AATGCA-------------AA
droEug1 scf7180000409738:22415-22523 + CGT--------------------------------------------------------------------------------A------------------------TAA-TA------TTTTATTAAAATTGTTATTAAAATTA-------------------------------------------AAA------TTATAAACTTG-TACA--TTT--ATATGTATG------------------------------------------------------------------------------------------------------------------------------------TAAATATATTTATTATTTTTAATT---------------------------------ATATGTTATAATT---------------------------------------------------------------------TATAT-------------AT
dm3 chr3R:2862189-2862269 - TAA--------------------------------------------------------------------------------A------------------------GTTACAAGACATTT---TT----------------------------------------------------------------------------T-------------------ATTCTGA------------------------------------------------------------------------------------------------------------------------------------TATTAAATTATAATATTTCTATTT---------------------------------ACAATATAAAAGAAAAATGTTT------------------------------------------------------------AATAT-------------TT
droSim2 3r:2786453-2786532 - TAA--------------------------------------------------------------------------------A------------------------GTTACAACACATTTATATT---CTGATATT------AA-------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAATATTGCTATTT---------------------------------AAAATATAAAATAATTATGTTT------------------------------------------------------------AATAT-------------TT
droSec2 scaffold_30:410139-410196 - TAA--------------------------------------------------------------------------------G------------------------TATAAC------------------------------AA-------------------------------------------AAC------TGC---------AACA--TAC--ATACGTATG------------------------------------------------------------------------------------------------------------------------------------TACATATTTTACATATTTAA--------------------------------------------------------------------------------------------------------------------------AA-------------TT
droYak3 3R:17968812-17968889 - TAT--------------------------------------------------------------------------------T------------------------TAAAA-------TTTTTTA--TATGATAAT------TT-------------------------------------------AAT------TCATATAGATA---------------TTCTTT------------------------------------------------------------------------------------------------------------------------------------CACAAATATTTAATATTTTTTATT---------------------------------AT----------------------------------------------------------------------------------AAT-------------TT
droEre2 scaffold_4845:5962616-5962675 + GTA--------------------------------------------------------------------------------T------------------------AGTATATTAAATATTAATA---TTTATATT------TA-------------------------------------------ATA------TCGTATATTTTCAGTA--TAT--TTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AACAACACAGCAAAACATAGGAAATTTACTTATTGCTCCAAATAGAACCCAGACCCGGAATATCTAGTTGTTGCCTAAGTTATCCTGTAAAGTGTAGTCTACCCGTATCCTATACTAAATATTGTTT---TGAATATT------AA-------------------------------------------ATA------TTATATAGTTACAACA--TAT--GTATGTTGG------------------------------------------------------------------------------------------------------------------------------------CACCTATTTTTAATATTTCTAATT---------------------------------ATAATTTAGAATAAGTATGTTCAGCATCTATC-------------------------------------------ATGGATAAATGTATCATGTAAAATAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATGTTCAGCATCTATC-------------------------------------------ATGG.......................2314.00404000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATGTTCAGCATCTATC-------------------------------------------ATGGA......................2413.00302010
......................................................................................GTAAAGTGTAGTCTACCCGTATCC...........................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATGTTCAGCATCTATC-------------------------------------------ATGGAT.....................2512.00202000
.........................................ATAGAACCCAGACCCGGAATATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00202000
...............................ATTGCTCCAAATAGAACCCAGACCCGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00220000
.................................................................................ATCCTGTAAAGTGTAGTCTACCCG................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000
.....................................CCAAATAGAACCCAGACCCGGAATATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00202000
......................AATTTACTTATTGCTCCAAATAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000
..................................................................................................................................................................................................................AACA--TAT--GTATGTTGG------------------------------------------------------------------------------------------------------------------------------------CACCTAT........................................................................................................................................................2311.00101000
..............................................................................................................................................................................................................TTACAACA--TAT--GTATGTTGG------------------------------------------------------------------------------------------------------------------------------------CACCTATT.......................................................................................................................................................2811.00101000
..................................................AGACCCGGAATATCTAGTTGTTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
................................................................................TATCCTGTAAAGTGTAGTCTACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
........................................................................GCCTAAGTTATCCTGTAAAGTGTAGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
..........................TACTTATTGCTCCAAATAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
......................................................................................................CCGTATCCTATACTAAATATTGTT...........................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
...............................................................................TTATCCTGTAAAGTGTAGTCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...............................................................................TTATCCTGTAAAGTGTAGTCTACCCGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...............................................................................TTATCCTGTAAAGTGTAGTCTACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.....................................................................................TGTAAAGTGTAGTCTACCCGTATCT...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTATC-------------------------------------------ATGGATAAATGTATCATG.........2511.00101000
........................................................................GCCTAAGTTATCCTGTAAAGTGTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.................................................CAGACCCGGAATATCTAGTTGTTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...........................................................................TAAGTTATCCTGTAAAGTGTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
........................................................GGAATATCTAGTTGTTGCCTAAGTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
....................................................ACCCGGAATATCTAGTTGTTGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.........................................................GAATATCTAGTTGTTGCCTAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCAGCATCTATC-------------------------------------------ATGGATAAATG................2611.00100010
.....................................................................................TGTAAAGTGTAGTCTACCCGTATCCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
...............................ATTGCTCCAAATAGAACCCAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
........................................................................GCCTAAGTTATCCTGTAAAGTGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
............................................................TATCTAGTTGTTGCCTAAGTTATCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATGTTCAGCATCTATC-------------------------------------------ATGGATAA...................2711.00101000
..............................................................................................................................................................................................................................TATGTTGG------------------------------------------------------------------------------------------------------------------------------------CACCTATTTTTAATA................................................................................................................................................2311.00101000
...........................................................................................GTGTAGTCTACCCGTATCCTATA.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
..................................GCTCCAAATAGAACCCAGACCCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..................................................................................................................................................................................................................AACA--TAT--GTATGTTGG------------------------------------------------------------------------------------------------------------------------------------CACCTATTTTT....................................................................................................................................................2711.00101000
................................................................................TATCCTGTAAAGTGTAGTCTACCCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTTCAGCATCTATC-------------------------------------------ATGGA......................2311.00101000
.........................................................................................................................................................................................................TATAGTTACAACA--TAT--GTATGTTGG------------------------------------------------------------------------------------------------------------------------------------C..............................................................................................................................................................2611.00101000
..................................................................................TCCTGTAAAGTGTAGTCTACCCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
........................................................GGAATATCTAGTTGTTGCCTAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
........................TTTACTTATTGCTCCAAATAGAACCCAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000
..............................................................................GTTATCCTGTAAAGTGTAGTCTACCCG................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
...........................................................................................................TCCTATACTAAATATTGTTT---TGAATA.................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
..........................TACTTATTGCTCCAAATAGAACCCAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
......................AATTTACTTATTGCTCCAAATAGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
..........................................................................CTAAGTTATCCTGTAAAGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..................................GCTCCAAATAGAACCCAGACCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
droVir3
TGT--------------------------------------------------------------------------------C------------------------CTATAA------AGTCTTTTAAACTTCTAT------CT-------------------------------------------ATA------GTATAGATATATACTATATACATTTGGGTAAGTTCATGTTTAATTAACCTTACATATTTTTATTTATA-AATAAGAATGAGTATGTGCCTCAGCACCTCAG---------------------------------------------------------------CGTTGATCTTCAAAAATC--------------------------------TAA-------------------------------------------------------------------------------------AACGTA-------------AASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TAA--------------------------------------------------------------------------------A-------GTTTTGTTAAATAATATATTATGTAAAATATTATTT---TTAATTTT------AA-------------------------------------------TTAAAATAAATTTAT-------TCA--AAC--ATAAGTTGGA-----------------------------CAGAATTTTCAAAGCTTTTTATATTTCTTAGAATATTAT---------------------------------------------------------------AATCTGTATATAGCATAT----------------------------------------------------------------------------------------------------------------------AAAAATAT-------------GTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GTG--------------------------------------------------------------------------------T------------------------TCAACAATATATGTAAGTG---TGAATATG------AA-------------------------------------------ATA------ATATATAGATAATAGA--TAT--TTGCGTATG------------------------------------------------------------------------------------------------------------------------------------TATCTATATGCATTAATTAT----------------------------------------------------------------------------------------------------------------------AGATAT-------------AASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
GCA--------------------------------------------------------------------------------A------------------------CCATT-------TTTCGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTGATT---------------------------------ATAATTTAAAATATGTATAA-------------------------------------------------------ATACATAAATAAAACAAATAAAATATASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ATT--------------------------------------------------------------------------------T------------------------TAAAG-------ATTATTA----------T--------TTGAGTTTCATTAG-----------------------------ATA------TTTTAC-------T----TAA--AAATAATTG------------------------------------------------------------------------------------------------------------------------------------TAGATATTTTTAATACTTTTTGTT---------------------------------TCAATTTAAAATT-----------------------------------------------------------------------TGT-------------ATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
ATA--------------------------------------------------------------------------------T------------------------TCAAT-------ATCCATA---TAAATATT------AT-------------------------------------------TAA------TCACATTATTACATTA--CAT--ATAT--ATG------------------------------------------------------------------------------------------------------------------------------------TATACATATTACTTACATTACATTTAAATTTGATATAAGAGTATAATGTATCTTATTTATAT--------------------------------------------------------------------------ACATATGT-------------ATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................TTACATTTAAATTTGATATAAGAGTA....................................................................................................................2630.331000010
droBip1
TTT--------------------------------------------------------------------------------T------------------------AAAATAAAAA---TTATTT----------G--------TTGACTTTTATGACAAAAATTGAAATATAACTCTTATTTTCAATTTTTATAATAATAATTAA----------------------------------------------------------------GAATAAG---------AA------------------TTATTT-----------------------------------TT----------CAATTTTTATAAAAAAAAT---------------------------------AT-------------------------------------------------------------------------------------AAACAA-------------AASizeHit CountTotal NormTotal
No Reads
droKik1
TAT--------------------------------------------------------------------------------A------------------------TTTAA------TATTTTAA---AATATTTT------TA-------------------------------------------AAA------TTATATTTAA----------------------------------------------------------------GGTTTTA---------AA------------------ATATAT-----------------------------------TT----------GAAATTATATTTAATATTTCAAAAT---------------------------------AT-------------------------------------------------------------------------------ATTTTA-------------AASizeHit CountTotal NormTotal
No Reads
droFic1
TTC--------------------------------------------------------------------------------A------------------------AATATT------------------------------AA-------------------------------------------ATA------TTATATATATATAAAG--TAT--ATAATATAT------------------------------------------------------------------------------------------------------------------------------------TTTATATATACAACAT------------------------------------------------TATTTAAATTATTGA----------ACCAATATAACCATAACATAACATTGATTGCAAATATAGATAT-------AATAT-------------AASizeHit CountTotal NormTotal
No Reads
droEle1
AAT--------------------------------------------------------------------------------A------------------------TTGGCC------AGTTTT------AGTTTT------CA-------------------------------------------GGA------TTAAATTGTTTAGACA--TAT--GGACTTTGG-----------------------------------------------------------G------------------GTCTGTTTTTAATCATTTCCTTAAATTTCATATTAATATGTTTGGTTCATCTTCTTATTATATTCATTAATTTG-------------------------------------------------------TTGT------------------------------------------------------------AAATT-------------AASizeHit CountTotal NormTotal
No Reads
droRho1
AAG--------------------------------------------------------------------------------T------------------------ATTGTT------------T---TGAATCAA------AA-------------------------------------------GTG------ATATTTATATATAATT--TAT--TTATTTTAC------------------------------------------------------------------------------------------------------------------------------------TATTTTTGTTTTTTCAATCTAATT---------------------------------AT----------------------------------------------------------------------------------GGT-------------TTSizeHit CountTotal NormTotal
No Reads
droBia1
CTA--------------------------------------------------------------------------------T------------------------ATTATA-----CATTATTA---TGCTTTTT------AG-------------------------------------------GTA------TTATACCTATAAGCCA--TAT--CCATACGAT------------------------------------------------------------------------------------------------------------------------------------CGCTTA--------------------------------------------------------------------------------------------------------------------------------------TTTT-------------TASizeHit CountTotal NormTotal
No Reads
droTak1
GTA--------------------------------------------------------------------------------T------------------------ACTAAACCAAATATTTTTA---AAAATATT------AA-------------------------------------------AAA------TAATTTACTTTCATTA--TTT--GTAG------------------------------------CTATTCTATAAATTTCATTATTTACTTAAAAACATTAGAAATGCAAAAAG--------------------------------------------------TATATTATATTAAAT---A--------------------------------TTT-------------------------------------------------------------------------------------AATGCA-------------AASizeHit CountTotal NormTotal
No Reads
droEug1
CGT--------------------------------------------------------------------------------A------------------------TAA-TA------TTTTATTAAAATTGTTATTAAAATTA-------------------------------------------AAA------TTATAAACTTG-TACA--TTT--ATATGTATG------------------------------------------------------------------------------------------------------------------------------------TAAATATATTTATTATTTTTAATT---------------------------------ATATGTTATAATT---------------------------------------------------------------------TATAT-------------ATSizeHit CountTotal NormTotal
No Reads
dm3
TAA--------------------------------------------------------------------------------A------------------------GTTACAAGACATTT---TT----------------------------------------------------------------------------T-------------------ATTCTGA------------------------------------------------------------------------------------------------------------------------------------TATTAAATTATAATATTTCTATTT---------------------------------ACAATATAAAAGAAAAATGTTT------------------------------------------------------------AATAT-------------TTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
No Reads
droSim2
TAA--------------------------------------------------------------------------------A------------------------GTTACAACACATTTATATT---CTGATATT------AA-------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAATATTGCTATTT---------------------------------AAAATATAAAATAATTATGTTT------------------------------------------------------------AATAT-------------TTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TAA--------------------------------------------------------------------------------G------------------------TATAAC------------------------------AA-------------------------------------------AAC------TGC---------AACA--TAC--ATACGTATG------------------------------------------------------------------------------------------------------------------------------------TACATATTTTACATATTTAA--------------------------------------------------------------------------------------------------------------------------AA-------------TTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TAT--------------------------------------------------------------------------------T------------------------TAAAA-------TTTTTTA--TATGATAAT------TT-------------------------------------------AAT------TCATATAGATA---------------TTCTTT------------------------------------------------------------------------------------------------------------------------------------CACAAATATTTAATATTTTTTATT---------------------------------AT----------------------------------------------------------------------------------AAT-------------TTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GTA--------------------------------------------------------------------------------T------------------------AGTATATTAAATATTAATA---TTTATATT------TA-------------------------------------------ATA------TCGTATATTTTCAGTA--TAT--TTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 08:07 AM