dwi_3747

Name	Class	Family	Strand
AT_rich	Low_complexity	Low_complexity	+

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- TAATCATGGAGGAGTGGCATCAAATTTTACCAGATGTAACCAAAAAATTGGTAATGTCAATGCCAAAACGATTGGCAGAGACCATAAAAAGGAAAGGTTATCCAACCTCTTATTAATTTTTCTTTGTTTTCTTCGAAAAAGTGTCTTTTCTGTTAGTTTCTTTAGTTTGTACGCATACTTTTTCTGCATTGAAATACGTTGTTTTTTAGTTTTTTAATTATAAAAAATAAACTTTAATAGATATTGAAAAA ********************************************************************************......((((((((((((.............)))))))))))).........((((((((((........((((.....)))).........))))))))))..***************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M045 female body	V118 embryo	M020 head
.......................................................................................................................................................................TGTACGCATACTTTATCTGCATTGAAA.........................................................	27	1	2	0.50	1	1	0	0
.....................................................................................................................................................................TTTGTACGCATACTTTTTCTG.................................................................	21	0	2	0.50	1	0	0	1
..................................................................................CATAAAAAGGAAAGGTTATCCAACCTCT.............................................................................................................................................	28	0	3	0.33	1	0	1	0
...............................................................................GACCATAAAAAGGAAAGGTTATCC....................................................................................................................................................	24	0	3	0.33	1	1	0	0
....................................................................................TAAAAAGGAAAGGTTATCCAACCTC..............................................................................................................................................	25	0	3	0.33	1	1	0	0
......................................................................................................................................................TGTTAGTTTCTTTAGTTTGTTAGA.............................................................................	24	3	5	0.20	1	0	1	0
........................TTTGTCGAGATGTAACCAAA...............................................................................................................................................................................................................	20	3	20	0.05	1	0	1	0

ATTAGTACCTCCTCACCGTAGTTTAAAATGGTCTACATTGGTTTTTTAACCATTACAGTTACGGTTTTGCTAACCGTCTCTGGTATTTTTCCTTTCCAATAGGTTGGAGAATAATTAAAAAGAAACAAAAGAAGCTTTTTCACAGAAAAGACAATCAAAGAAATCAAACATGCGTATGAAAAAGACGTAACTTTATGCAACAAAAAATCAAAAAATTAATATTTTTTATTTGAAATTATCTATAACTTTTT ***************************************************************......((((((((((((.............)))))))))))).........((((((((((........((((.....)))).........))))))))))..********************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M045 female body	V118 embryo	V117 male body
.........................................................................................TCCTTTCCAATAGGTTGGAGAATAAT........................................................................................................................................	26	0	3	1.67	5	2	3	0
........................................................................................TTCCTTTCCAATAGGTTGGAGAATAAT........................................................................................................................................	27	0	3	1.67	5	5	0	0
..............................................................GGTTTTGCTAACCGTCTCTGGTATTT...................................................................................................................................................................	26	0	3	1.33	4	4	0	0
.................................................................TTTGCTAACCGTCTCTGGTATTTT..................................................................................................................................................................	24	0	3	1.33	4	3	0	1
..............................................................GGTTTTGCTAACCGTCTCTGGTATT....................................................................................................................................................................	25	0	3	1.00	3	3	0	0
..................TAGTTTAAAATGGTCTACATTGGTT................................................................................................................................................................................................................	25	0	1	1.00	1	1	0	0
....................................................................................................................................................................CAAACATGCGTATGAAATAGACGTAACT...........................................................	28	1	2	1.00	2	1	1	0
...........................................................TACGGTTTTGCTAACCGTCTCTGGTAT.....................................................................................................................................................................	27	0	3	0.67	2	2	0	0
.............................................................TGGTTTTGCTAACCGTCTCTGGTATT....................................................................................................................................................................	26	1	3	0.67	2	0	2	0
............................................................ACGGTTTTGCTAACCGTCTCTGGTAT.....................................................................................................................................................................	26	0	3	0.67	2	2	0	0
......................................................................................................................................................ACAATCAAAGAAATCAAACATGCGTAT..........................................................................	27	0	2	0.50	1	0	1	0
....................................................................................................................................................................CAAACATGCGTATGAAATAGACGTAACTT..........................................................	29	1	2	0.50	1	1	0	0
....................................................................................................................................................................CAAACATGCGTATGAAATAGACGTAAC............................................................	27	1	2	0.50	1	0	1	0
..TAGTACCTCCTCACCGTAGTTTAA.................................................................................................................................................................................................................................	24	0	2	0.50	1	1	0	0
.......................................................................................................................................................................ACATGCGTATGAAATAGACGTAACT...........................................................	25	1	2	0.50	1	1	0	0
.......................................................................................TTTCCTTTCCAATAGGTTGGAGAATAAT........................................................................................................................................	28	0	3	0.33	1	1	0	0
................................CTACATTGGTTTTTTAACCATTACAGT................................................................................................................................................................................................	27	0	3	0.33	1	1	0	0
.............................................................AGTATTTGCTAACCGTCTCTGGTATTTT..................................................................................................................................................................	28	3	3	0.33	1	1	0	0
...........................................................ATCGGTTTTGCTAACCGTCTCTGGTAT.....................................................................................................................................................................	27	2	3	0.33	1	1	0	0
...............................................AACCATTACAGTTACGGTTTTGCTAAC.................................................................................................................................................................................	27	0	3	0.33	1	1	0	0
..............................................TAACCATTACAGTTACGGTTTTGC.....................................................................................................................................................................................	24	0	3	0.33	1	1	0	0
..............................................................AATTTTGCTAACCGTCTCTGGTATTTT..................................................................................................................................................................	27	2	3	0.33	1	0	1	0
...............................................................GTTTTGCTAACCGTCTCTGGTATTT...................................................................................................................................................................	25	0	3	0.33	1	1	0	0
..............................................TAACCATTACAGTTACGGTTTTGCTAAC.................................................................................................................................................................................	28	0	3	0.33	1	1	0	0
..............................................................................TCTGGTATTTTTCCTTTCCAATAGGT...................................................................................................................................................	26	0	3	0.33	1	1	0	0
........................................................................................TTCCTTTCCAATAGGTTGGAGAATAA.........................................................................................................................................	26	0	3	0.33	1	1	0	0
.............................................................TGGTTTCGCTAACCGTCTCTTGTATT....................................................................................................................................................................	26	3	3	0.33	1	0	1	0
........................................................................................TTCCTTTCCAATAGGTTGGAGAATAATT.......................................................................................................................................	28	0	3	0.33	1	0	1	0
.......................................GGTTTTTTAACCATTACAGTTACGGT..........................................................................................................................................................................................	26	0	3	0.33	1	1	0	0
..............................................................GGTTTTGCTAACCGTCTCTGGTAT.....................................................................................................................................................................	24	0	3	0.33	1	1	0	0
.......................................................................AACCGTCTCTGGTATTTTTCCTTTCCAA........................................................................................................................................................	28	0	3	0.33	1	1	0	0
.............................................TTAACCATTACAGTTACGGTTTTGCT....................................................................................................................................................................................	26	0	3	0.33	1	1	0	0
...................................................................................................TAGGTTGGAGAATAATTAAAA...................................................................................................................................	21	0	4	0.25	1	1	0	0
........................................................................................................................................................................................................CAAAAAATCAAAAAATTAAT...............................	20	0	7	0.14	1	1	0	0
........................................TCTTTTTAACCATTGCAGT................................................................................................................................................................................................	19	3	20	0.10	2	2	0	0
......ACCACCTCACAGGAGTTTA..................................................................................................................................................................................................................................	19	3	20	0.05	1	0	1	0

Species	Coordinate	ID	Alignment
droWil2	scf2_1100000004954:3965017-3965267 +	dwi_3747	TAATCATGGAGGAGTGGCATCAAATTTTACCAGATGTAACCAAAAAATTGGTAATGTC-AATGCCAAAACGATTGGCAGAGACCATAAAAAGGA-AAGGTTATCCAACCTCTTATTAATTTTTCTTTGTTTTCTTCGAAAAAGT-GTCTTT-TCTGTTAGTTTCTTTAG------T---TTGTA---------------------CGCATACTTTT------TCTGCA---------TT-GAAATACGTT-GTTTTTTAGTTTTTTAAT-TATAAAAAATA-------AAC----------------TTTAA-------------------------------------------------------TAGA---------------------TAT--------TGAAAAA
droVir3	scaffold_13050:2250880-2251116 -		CCCTAATGGAAGAGTGGCACAAAATTGAGCCAAATGTTGCCCGAAAATTGGTGCATTC-GATGCCAAATCGCCTGGAAAGCGTTATAAAACAAA-AAGGCATGCCGACTAAGTATTAATTTTTATCTCATGTTTTATTTT-TTTAAATTTT--AACACAATTATTTAAG------T---TTTTG---------------------CCAATACTTTT------GTCCCT---------ATGAAAATTACCA-TATTTTTTGTTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AGCAACA
droMoj3	scaffold_4574:1707-1958 +		TTCTGATGGAGGAGTGGCTCAAAATTCCGGCTGATTTCACCCGGAAATTGGTGGCATC-GATGCCAAAACGGTTGGAAGAGACCAAGAAGCGAA-AGGGGTATCCAACCTCATATTAATTTTTA-A-ATTTTCATTGAAAAAAA-GTTATTTTTGGTTTTGTTTTTTAG------T---TTGTA---------------------CGCAAACTTTT------TCTAAG---------TG-AATTTTCGTT-GTTTTTTTCTTATTTAAAATATAAAAAAAA-------AAC-----------------TGTT-----------------------TA------------------------------ATAT---------------------TAT--------TTAAAAA
droGri2	scaffold_15116:454112-454362 -		CTCTGCTGGAGGAGTGGAGCAAAATTAGTCCAGAAACGACCCGGAAGCTGGTATCTTC-CATGAACAATAGGTTAAGGGGAGTTATTAAGGCTA-AAGGATATCATACTAAGTATTAACATCCT-T----------ATTTAAGT-T-----------------------------T---TTATACGCCAAATATGTTACT-TTTCTCTAGACTGTT------GA---A---------ATAAGCT-TTGACCTGTAT----------------------------------------------------------------TTTGGATAAGTTTTCAGTTTTTGACTAATTTTGGTTAATTAATTAATATTT---------------------TAA--------TGAAAAC
dp5	Unknown_group_667:5104-5343 +		TCATCATGGAGGAATGGGGCAAAATAACTACCGAGGACACCAGGAATCTGGTTGACTC-AATGCCTAGACGTCTGGCAGATGTTTTAAAACAAA-AGGGATATCCCACCAAATATAAAC----------------------------------------AATTTCGAATTTTAGTG---TTGTACGCAGAAT-TGTTACAGTGTATGAAGACTTTT------GA-GGC---------GTCAAAT-TTGCCTTGTTTTTTTT--------------AATGAT-------TTTTTTTTCCTTTTAAGAATAG---------------------------------------------------------AATA---------------------GAA--------TAAAAAA
droPer2	scaffold_1136:3911-4165 +		GGCTTCAAGAAGAGTGGGCCAAAATTGGTCATGAATATACACAAAATATAATAAAAAA-TATGCCAAAACGCCTAGCCGATACCATAAATAATA-ATGGCTATCACACAAAATATTAAATTAAG-TTATTTTTCTAGATTAAGT-AGTTAT-TTTTT-AGTTGTATAAG------GTAATGTAA---------------------CGCATATCTTGAGGCTCCCTCA----------TT-AAAATTGTTG-TAT------TTTTTTTGT-AGTTTAATGCA-------TTT----------------TATTC-------------------------------------------------------GCGTTTGA-----------------AGT--------TGAAAAA
droAna3	scaffold_13099:1815728-1815965 +		TGGTGGTGGAAGAATGGCTTAATATTTCCCCAACGGTGACTGAAAAATTGGTGCAATC-AATGCCAAACCGTTTGGCGTAAGCTATCAAAAGAA-AGAGGTACTCCACTTCTTATTAATTAATA-G----------TATTAAGT-ATCATT-ATTAACCAACTTGGAAG------T---TTAT-------------------------AAATTTTT------TCTGGC---------TA-AAAATTCGTC-ACTTTTTCGTTTTTTAAT-TTTAATAAAAT-------AAA----------------TTAAG-------------------------------------------------------CTATTA-------------------TAC--------CGAAAAA
droBip1	scf7180000394944:15229-15502 +		TGATCTTGGATGAGTGGAGGAAAATACCACCTGCTTTCACTGAAAAATTGGTTCATTC-AATGCCAAAACGATTGACTGAAACTATAAAGAGGA-AGGGGTATCCTACCTCATACTAATTTAAT-TCATTATATATTAATAAGT-GCCTTT-TTTTATATTAATTTAAG------T---TTGTA---------------------CGCAGACTTTT------TCTTGCC--------CA-AAAACGTGTG-CATTTTTAGTTTCTTAAT-TTTAATTAAAT-------AAG----------------GT------------------------------------------------------------GTT-GATTTCAATAAATAAAAAGTAGCTATAATTTTGGAAA
droKik1	scf7180000302281:32383-32619 +		TCATTATGGAGGAATGGCTGAATATTTCCCCATCGGTGACTGAAAAATTGGTGCAATC-AATGCCAAAACGTTTGGAGGAAACTATCAAAAGAA-AGGGGTACTCCACTTCTTATTAAATAATA-G----------AATTAAGT-ATCATT-ATTAACCAACTTTGAAG------T---TTGTA---------------------CGCATATTTTT------TCTGGC---------AA-AAAATTCGTC-ACTTTTTCGTTTTTTAAT-TTTAATACATT-------AAG----------------TTAAG-------------------------------------------------------CTAT--------------------------------TATGACA
droFic1	scf7180000454106:2128131-2128370 -		TCATTATGGAAGAATGGCTTAATATTTCCCCATCGGTGACTGAAAAATTGGTACAATC-AATGCCAAAACGTTTGGAGGAAGCTATCAAACGAA-AGGGGTACCCCACTTCTTATTAAAAATTA-G----------AATTAAGT-ACCATT-TTTAAGCAACTTTGAAG------T---TTGTA---------------------CGCATATTTTT------TCTGGC---------TA-AAAATTCGTC-ACTTTTTCGTTTTTTAAT-TTTAATAAATA-------AAG----------------TTAAG-------------------------------------------------------GTGTT---------------------AT--------GTTAATA
droEle1	scf7180000490421:56250-56492 -		TTATTGTCGAAGAATGGAGCAAAATAACAGCAGAGGATACAACGAAATTGGTCCAGTC-AATGCCAAATCGGTTGGCTGAAGTTATAAAACGTA-AAGGGTATCCAACTTCGTACTTAATATTA-A----------AAAAATAC-GGAGTT-TTAATTGTTTTTTTGAT------T---TTGTA---------------------CGCATACTTTT------TCTGAG---------TG-AAAATATACT-TTTTTTAC-ATTTTTTGT-TATATTATTTA-------AAG----------------TTTAA-------------------------------------------------------GTGCTAGA-----------------AAG--------TGAGAAG
droRho1	scf7180000760965:2654-2892 -		TTATTATGGAAGAATGGCTCAATATTTCCCCATCGGTGACCCAAAAATTGGTGCAATC-ATTGCCAAAACGTTTAAATGAAACTATTAAAAGAA-AGGGGTACCCCACTTCCTATTAAATACTA-G----------AATTAAGT-ACCTTT-ATTAAACAATTTTGAAA------C---TTGTA---------------------CGCATACTTTT------TCTTGT---------TA-AAATTTCATG-AATTTTTGGTTTTTAAAT-TTTAATAAGTT-------AAG----------------TTAT--------------------------------------------------------ATAA---------------------TAA--------GGAAAAT
droBia1	scf7180000301608:13486-13722 -		TCATGCAGGAATAATGGAAAAAAA----AGCAGACGATATGTCGAAATAGGTCCACTC-AATGCCAAATCGGTTTTCTGAAAAAATTAATCGAA-AAGGATATCCAACTTCGTACTAATATATA-A----------AAA-AAAC-GT-GTT-GTTTCTAAATTTTATGT------T---TTGTA---------------------CGCATACTTTT------TCTGAA---------TG-AAATTTGGAC-TATTTTTTAATT--TAAT-TTTTTTAAATACAATCTAAAG----------------TTAAA-------------------------------------------------------GAGCT-------------------------------AGGAACT
droTak1	scf7180000410911:3588-3842 +		TCAATGTCGAGGAATGGAATCAAATAACGGCGATGGATGCAAGGACATTGGTCCAATC-GATGACGAATATGTAGACTGAAGTTATAAAACATA-AAGGGTATCAAACTCCGTACTAAACTCGACGTACTTTGCCCAAAA-TATGGCTTTT--TCTAATACCATATGCA------T---TTGTA---------------------CGCATACTTTT------TCTGAT---------GCGAAATCCGGCC-AATTTGTACATTTTTATT-TATATTAGGAA-------AAG----------------TAAAG-------------------------------------------------------GTGCTAGA-----------------AAT--------TAATAAG
droEug1	scf7180000407330:3968-4207 +		TCATTATGGAAGAATGGCTTAATATTTCCCCATCGGTGACTG-AAAATTGGTACAATCAAATGCCAAAACGTTTGGAGGAAGCTATCAAACGAA-AGGGGTACCCCACTTCTTATTAAAAATTA-G----------ATTTAAGT-ACCATT-TTTAAGCAACTTTGAAG------T---TTGTA---------------------CGCATATTTTT------TCTGGC---------TA-AAAATTCGTC-ACTTTTTCGTTTTTTAAT-TTTAATAAATA-------AAG----------------TTAAG-------------------------------------------------------GTGTT---------------------TA--------TGTTAAT
droYak3	2L:20875652-20875917 +		TCATTGCAAAATATTGGCAAAATATCACCCCGGACGACACGGAAAAATTGGTCCAAAC-TATGCCAAAACGCTTGGACGAAGCAATTAAAAGAAAATGGGTATCCAACGTCATTATCATTTTTA-ATATTTTGTTAGTGTAAAC-GCCGTT-TTTTA-AGTATTTTTTG------T---TTGTA---------------------CGCATACTTTT------TCATGTGCCATATGCTA-AAAATTTGTG-CCT--------TTTTATT-TTTTATAAAAT---AAGAAAG----------------T-----ACTTAGAGCTAAGAA---------------------------------------AACC---------------------TAC--------GGAAAAA
droEre2	scaffold_4690:3510155-3510365 +		TAA-----------------AACTTCACCCCGGACGTCACCCAAAAATTGGTGCAATC-AATGCCAAAACGTTTGGCAGAAACCATTAAAAGAA-AGGGGTATCCAACTTCATATTTGATTTC--------------------------------------------------------------------------------------------------------------------------CCATG-AACTTGTACCTTTTTAAT-TTCTATAAAAT-------AAG----------------TTAAGTACTTAAAACTAAGAAAGCCTTCTAATATTA-TTA---ATAATAAATGTCTTTATAACG---------------------TAA--------AAAAGAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droWil2

TAATCATGGAGGAGTGGCATCAAATTTTACCAGATGTAACCAAAAAATTGGTAATGTC-AATGCCAAAACGATTGGCAGAGACCATAAAAAGGA-AAGGTTATCCAACCTCTTATTAATTTTTCTTTGTTTTCTTCGAAAAAGT-GTCTTT-TCTGTTAGTTTCTTTAG------T---TTGTA---------------------CGCATACTTTT------TCTGCA---------TT-GAAATACGTT-GTTTTTTAGTTTTTTAAT-TATAAAAAATA-------AAC----------------TTTAA-------------------------------------------------------TAGA---------------------TAT--------TGAAAAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...............................................................................................................................................................................T---TTGTA---------------------CGCATACTTTT------TCTG........................................................................................................................................................................................	21	2	0.50	1	1	0	0	0	0
...................................................................................CATAAAAAGGA-AAGGTTATCCAACCTCT..........................................................................................................................................................................................................................................................................................................	28	3	0.33	1	0	0	0	1	0
................................................................................GACCATAAAAAGGA-AAGGTTATCC.................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
.....................................................................................TAAAAAGGA-AAGGTTATCCAACCTC...........................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0

droVir3

CCCTAATGGAAGAGTGGCACAAAATTGAGCCAAATGTTGCCCGAAAATTGGTGCATTC-GATGCCAAATCGCCTGGAAAGCGTTATAAAACAAA-AAGGCATGCCGACTAAGTATTAATTTTTATCTCATGTTTTATTTT-TTTAAATTTT--AACACAATTATTTAAG------T---TTTTG---------------------CCAATACTTTT------GTCCCT---------ATGAAAATTACCA-TATTTTTTGTTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AGCAACA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...........................................................................................................CTAAGTATTAATTTTTATCTCATG.......................................................................................................................................................................................................................................................................................	24	15	14.87	223	0	0	17	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	25	0	48	38	18	0	2	5	21	0	0	18	13	11	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTT.....................................................................................................................................................................................................................................................................................	26	15	10.53	158	0	0	9	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	21	0	49	39	2	0	1	5	8	0	0	4	5	5	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTTT....................................................................................................................................................................................................................................................................................	27	15	6.80	102	0	0	11	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	2	6	0	25	22	5	0	0	1	7	0	0	6	8	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGT......................................................................................................................................................................................................................................................................................	25	15	5.53	83	0	0	5	0	2	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	3	12	0	17	15	3	0	0	4	4	0	0	5	7	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCCTGG..............................................................................................................................................................................................................................................................................................................................................	25	11	5.45	60	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	0	6	1	1	0	0	0	6	0	0	6	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25
..................................................GTGCATTC-GATGCCAAATCGCCTG...............................................................................................................................................................................................................................................................................................................................................	24	11	4.91	54	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	0	13	2	2	1	0	0	7	0	0	8	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
.......................................................................................................................TTTTATCTCATGTTTTATTTT-TTTAAA.......................................................................................................................................................................................................................................................................	27	15	4.40	66	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0	0	0	3	0	0	1	0	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TTTTATCTCATGTTTTATTTT-TTTAAAT......................................................................................................................................................................................................................................................................	28	15	4.00	60	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0	0	0	5	0	0	0	0	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCG...................................................................................................................................................................................................................................................................................................................................................	20	11	3.36	37	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	5	0	7	0	2	2	7	0	0	3	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TATTTTT........................................................................................................................................................	25	11	3.09	34	0	0	10	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	3	4	2	0	0	0	2	0	0	5	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TATTTT.........................................................................................................................................................	24	11	3.09	34	0	0	12	0	0	0	0	0	0	0	4	0	4	0	0	0	0	0	0	0	0	0	0	0	3	0	1	4	0	0	0	0	0	0	0	2	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCCT................................................................................................................................................................................................................................................................................................................................................	23	11	2.82	31	0	0	1	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	3	0	6	1	2	0	0	0	6	0	0	2	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TATTTTTTG......................................................................................................................................................	27	11	2.55	28	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	0	1	1	8	0	0	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..................................................GTGCATTC-GATGCCAAATCGC..................................................................................................................................................................................................................................................................................................................................................	21	11	2.45	27	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	7	0	1	0	1	1	4	0	0	7	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAAAATTGAGCCAAATGTTGC..................................................................................................................................................................................................................................................................................................................................................................................	22	10	2.30	23	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	2	0	0	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCCTGGAA............................................................................................................................................................................................................................................................................................................................................	27	11	2.27	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	9	0	1	0	0	0	2	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTTA....................................................................................................................................................................................................................................................................................	27	15	2.27	34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	5	5	0	0	0	1	3	0	0	2	8	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................GCGTTATAAAACAAA-AAGGCATGCCGAC..............................................................................................................................................................................................................................................................................................................	28	12	2.25	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	1	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................GCGTTATAAAACAAA-AAGGCATG...................................................................................................................................................................................................................................................................................................................	23	12	1.83	22	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	0	3	1	1	0	0	0	0	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAAAATTGAGCCAAATGTTGCCC................................................................................................................................................................................................................................................................................................................................................................................	24	10	1.70	17	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	3	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAAAATTGAGCCAAATGTTGCCT................................................................................................................................................................................................................................................................................................................................................................................	24	10	1.60	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	3	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCC.................................................................................................................................................................................................................................................................................................................................................	22	11	1.55	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	4	0	0	0	2	0	0	4	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATTTTTTG......................................................................................................................................................	26	11	1.55	17	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TTTTATCTCATGTTTTATTTT-TTTAA........................................................................................................................................................................................................................................................................	26	15	1.53	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCCTGGA.............................................................................................................................................................................................................................................................................................................................................	26	11	1.45	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13
..................ACAAAATTGAGCCAAATGTTGCCCGA..............................................................................................................................................................................................................................................................................................................................................................................	26	10	1.40	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATTTTTTGT.....................................................................................................................................................	27	11	1.36	15	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	1	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................GCGTTATAAAACAAA-AAGGCATGCCG................................................................................................................................................................................................................................................................................................................	26	12	1.33	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	1	1	0	2	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................GCGTTATAAAACAAA-AAGGCATGC..................................................................................................................................................................................................................................................................................................................	24	12	1.25	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	1	0	0	0	1	0	0	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TATTTTTTGT.....................................................................................................................................................	28	11	1.18	13	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	6	2	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TTTT--AACACAATTATTTAAG------T---TTTTG---------------------C............................................................................................................................................................................................................	27	11	1.18	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	3	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GGAAGAGTGGCACAAAATTGAGC............................................................................................................................................................................................................................................................................................................................................................................................	23	11	1.09	12	0	0	11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTTC....................................................................................................................................................................................................................................................................................	27	15	1.07	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	4	0	1	4	1	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCCTGGT.............................................................................................................................................................................................................................................................................................................................................	26	11	1.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATTTTTTGTT....................................................................................................................................................	28	11	1.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	1	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAAAATTGAGCCAAATGTTGCC.................................................................................................................................................................................................................................................................................................................................................................................	23	10	1.00	10	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................TCGCCTGGAAAGCGTTATAAAAC...............................................................................................................................................................................................................................................................................................................................	23	12	0.92	11	0	0	0	0	1	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATTTTT........................................................................................................................................................	24	11	0.91	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	0	1	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCA.........................................................................................................................................................................................................................................................................................	22	15	0.87	13	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	0	0	1	1	0	0	2	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TTTTATCTCATGTTTTATTTT-TTTAAATT.....................................................................................................................................................................................................................................................................	29	15	0.87	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	2	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GGAAGAGTGGCACAAAATTGAGCCA..........................................................................................................................................................................................................................................................................................................................................................................................	25	11	0.82	9	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................T--AACACAATTATTTAAG------T---TTTTG---------------------CCAAT........................................................................................................................................................................................................	28	10	0.80	8	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCAT........................................................................................................................................................................................................................................................................................	23	15	0.80	12	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	7	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................AGCGTTATAAAACAAA-AAGGCATG...................................................................................................................................................................................................................................................................................................................	24	12	0.75	9	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................GCGTTATAAAACAAA-AAGGCATGCCGA...............................................................................................................................................................................................................................................................................................................	27	12	0.75	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	1	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................GAAAGCGTTATAAAACAAA-AAGGC......................................................................................................................................................................................................................................................................................................................	24	12	0.75	9	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TATTTTTT.......................................................................................................................................................	26	11	0.73	8	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GGAAGAGTGGCACAAAATTGAGCC...........................................................................................................................................................................................................................................................................................................................................................................................	24	11	0.73	8	0	0	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCCTGGAAAG..........................................................................................................................................................................................................................................................................................................................................	29	11	0.73	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
........................TTGAGCCAAATGTTGCCCGAAAATTGG.......................................................................................................................................................................................................................................................................................................................................................................	27	10	0.70	7	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TATTT..........................................................................................................................................................	23	11	0.64	7	0	0	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................T--AACACAATTATTTAAG------T---TTTTG---------------------CCAA.........................................................................................................................................................................................................	27	11	0.64	7	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATTTTTT.......................................................................................................................................................	25	11	0.64	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CCCTAATGGAAGAGTGGC........................................................................................................................................................................................................................................................................................................................................................................................................	18	8	0.63	5	0	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................AAAGCGTTATAAAACAAA-AAGGCATGC..................................................................................................................................................................................................................................................................................................................	27	12	0.58	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................GAAAGCGTTATAAAACAAA-AAGG.......................................................................................................................................................................................................................................................................................................................	23	12	0.58	7	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................GAAAGCGTTATAAAACAAA-AAGGCA.....................................................................................................................................................................................................................................................................................................................	25	12	0.58	7	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................TTT--AACACAATTATTTAAG------T---TTTTG---------------------CC...........................................................................................................................................................................................................	27	11	0.55	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................AGCGTTATAAAACAAA-AAGGCATGC..................................................................................................................................................................................................................................................................................................................	25	12	0.50	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAAAATTGAGCCAAATGTTGCCCGAAA............................................................................................................................................................................................................................................................................................................................................................................	28	10	0.50	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAAAATTGAGCCAAATGTTGCCCGAA.............................................................................................................................................................................................................................................................................................................................................................................	27	10	0.50	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTTTT...................................................................................................................................................................................................................................................................................	28	15	0.47	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTTTA...................................................................................................................................................................................................................................................................................	28	15	0.47	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	2	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................T--AACACAATTATTTAAG------T---TTTTG---------------------CC...........................................................................................................................................................................................................	25	11	0.45	5	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCCTGGAAA...........................................................................................................................................................................................................................................................................................................................................	28	11	0.45	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................TTT--AACACAATTATTTAAG------T---TTTTG---------------------C............................................................................................................................................................................................................	26	11	0.45	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................T---------ATGAAAATTACCA-TATTTTTTGTTT...................................................................................................................................................	26	11	0.45	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................TTT--AACACAATTATTTAAG------T---TTTTG---------------------CCA..........................................................................................................................................................................................................	28	11	0.45	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTTG....................................................................................................................................................................................................................................................................................	27	15	0.40	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TAAGTATTAATTTTTATCTCATGTT.....................................................................................................................................................................................................................................................................................	25	15	0.40	6	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATC............................................................................................................................................................................................................................................................................................	19	15	0.40	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TGCATTC-GATGCCAAATCGCCTGGAAAG..........................................................................................................................................................................................................................................................................................................................................	28	11	0.36	4	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TTC-GATGCCAAATCGCCTGGAAAGCGT.......................................................................................................................................................................................................................................................................................................................................	27	11	0.36	4	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGT..................................................................................................................................................................................................................................................................................................................................................	21	11	0.36	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TC-GATGCCAAATCGCCTGGAAAGCGT.......................................................................................................................................................................................................................................................................................................................................	26	11	0.36	4	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TATT...........................................................................................................................................................	22	11	0.36	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TGCATTC-GATGCCAAATCGCCTG...............................................................................................................................................................................................................................................................................................................................................	23	11	0.36	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TTTT--AACACAATTATTTAAG------T---TTTTG---------------------CC...........................................................................................................................................................................................................	28	11	0.36	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCCA................................................................................................................................................................................................................................................................................................................................................	23	11	0.36	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................GCGTTATAAAACAAA-AAGGCA.....................................................................................................................................................................................................................................................................................................................	21	12	0.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TTTTATCTCATGTTTTATTTT-TTTAAAA......................................................................................................................................................................................................................................................................	28	15	0.33	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................GAAAGCGTTATAAAACAAA-AAGGCATGC..................................................................................................................................................................................................................................................................................................................	28	12	0.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................AGCGTTATAAAACAAA-AAGGCATGCCGA...............................................................................................................................................................................................................................................................................................................	28	12	0.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................AAGCGTTATAAAACAAA-AAGGCATG...................................................................................................................................................................................................................................................................................................................	25	12	0.33	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................TCGCCTGGAAAGCGTTATAAAA................................................................................................................................................................................................................................................................................................................................	22	12	0.33	4	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TTTTATCTCATGTTTTATTTT-TTTAAATC.....................................................................................................................................................................................................................................................................	29	15	0.33	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTA.....................................................................................................................................................................................................................................................................................	26	15	0.33	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TGAGCCAAATGTTGCCCGAAAATTGG.......................................................................................................................................................................................................................................................................................................................................................................	26	10	0.30	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAAAATTGAGCCAAATGTTGCCCG...............................................................................................................................................................................................................................................................................................................................................................................	25	10	0.30	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....ATGGAAGAGTGGCACAAAATTGAGCCA..........................................................................................................................................................................................................................................................................................................................................................................................	27	11	0.27	3	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................T---------ATGAAAATTACCA-TATTTTTTGTT....................................................................................................................................................	25	11	0.27	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TGCATTC-GATGCCAAATCGCCTGG..............................................................................................................................................................................................................................................................................................................................................	24	11	0.27	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TGCATTC-GATGCCAAATCGCCT................................................................................................................................................................................................................................................................................................................................................	22	11	0.27	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TTC-GATGCCAAATCGCCTGGAAAGCG........................................................................................................................................................................................................................................................................................................................................	26	11	0.27	3	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TAT............................................................................................................................................................	21	11	0.27	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TAAGTATTAATTTTTATCTCATG.......................................................................................................................................................................................................................................................................................	23	15	0.27	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTCC....................................................................................................................................................................................................................................................................................	27	15	0.27	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................AAGCGTTATAAAACAAA-AAGGCATGC..................................................................................................................................................................................................................................................................................................................	26	12	0.25	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAATGGAAGAGTGGCACAAAATTGAGCCA..........................................................................................................................................................................................................................................................................................................................................................................................	29	8	0.25	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................AGCGTTATAAAACAAA-AAGGCATGCC.................................................................................................................................................................................................................................................................................................................	26	12	0.25	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TGGCACAAAATTGAGCCA..........................................................................................................................................................................................................................................................................................................................................................................................	18	12	0.25	3	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................AGCGTTATAAAACAAA-AAGGCATGCCG................................................................................................................................................................................................................................................................................................................	27	12	0.25	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................AACACAATTATTTAAG------T---TTTTG---------------------CCAA.........................................................................................................................................................................................................	26	13	0.23	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAATGGAAGAGTGGCACAAAATT................................................................................................................................................................................................................................................................................................................................................................................................	23	9	0.22	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................T---------ATGAAAATTACCA-TATTTTTTGTTTT..................................................................................................................................................	27	9	0.22	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................TT------GTCCCT---------ATGAAAATTACCA-TATTT..........................................................................................................................................................	26	9	0.22	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGTTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AG.....	25	9	0.22	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................T---------ATGAAAATTACCA-TATTTTTTGTTTTT.................................................................................................................................................	28	9	0.22	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TAAGTATTAATTTTTATCTCATGT......................................................................................................................................................................................................................................................................................	24	15	0.20	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GGAAGAGTGGCACAAAATTGAGCCAAA........................................................................................................................................................................................................................................................................................................................................................................................	27	10	0.20	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............AGTGGCACAAAATTGAGCCAAATGTTG...................................................................................................................................................................................................................................................................................................................................................................................	27	10	0.20	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................ATTGAGCCAAATGTTGCCCGAAAATTGG.......................................................................................................................................................................................................................................................................................................................................................................	28	10	0.20	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAAAATTGAGCCAAATGTTG...................................................................................................................................................................................................................................................................................................................................................................................	21	10	0.20	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTAT.............................................................................................................................................................................................................................................................................................	18	15	0.20	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................ATTAATTTTTATCTCATGTTT....................................................................................................................................................................................................................................................................................	21	15	0.20	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTC.....................................................................................................................................................................................................................................................................................	26	15	0.20	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTC..........................................................................................................................................................................................................................................................................................	21	15	0.20	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATTA......................................................................................................................................................................................................................................................................................	25	15	0.20	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATC.......................................................................................................................................................................................................................................................................................	24	15	0.20	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATT.......................................................................................................................................................................................................................................................................................	24	15	0.20	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTTCC...................................................................................................................................................................................................................................................................................	28	15	0.20	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TGCATTC-GATGCCAAATCG...................................................................................................................................................................................................................................................................................................................................................	19	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCT.................................................................................................................................................................................................................................................................................................................................................	22	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATT...........................................................................................................................................................	21	11	0.18	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCCTGGAAAA..........................................................................................................................................................................................................................................................................................................................................	29	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TGGAAGAGTGGCACAAAATTGAGC............................................................................................................................................................................................................................................................................................................................................................................................	24	11	0.18	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TGCATTC-GATGCCAAATCGCCTGGAAA...........................................................................................................................................................................................................................................................................................................................................	27	11	0.18	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TGCATTC-GATGCCAAATCGCCTGGA.............................................................................................................................................................................................................................................................................................................................................	25	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
............................................................ATGCCAAATCGCCTGGAAA...........................................................................................................................................................................................................................................................................................................................................	19	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................GATGCCAAATCGCCTGGAAAGCGTT......................................................................................................................................................................................................................................................................................................................................	25	11	0.18	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TTTT--AACACAATTATTTAAG------T---TTTTG---------------------.............................................................................................................................................................................................................	26	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TC-GATGCCAAATCGCCTGGAAAG..........................................................................................................................................................................................................................................................................................................................................	23	11	0.18	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TGCATTC-GATGCCAAATCGC..................................................................................................................................................................................................................................................................................................................................................	20	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TC-GATGCCAAATCGCCTGGAAAGCGTTA.....................................................................................................................................................................................................................................................................................................................................	28	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................GTCCCT---------ATGAAAATTACCA-TATTTTTTG......................................................................................................................................................	28	11	0.18	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATTTT.........................................................................................................................................................	23	11	0.18	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGCATTC-GATGCCAAATCGCCTT...............................................................................................................................................................................................................................................................................................................................................	24	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..................................................GTGCATTC-GATGCCAAATCGCCTC...............................................................................................................................................................................................................................................................................................................................................	24	11	0.18	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TATTTTC........................................................................................................................................................	25	11	0.18	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AAAATTGGTGCATTC-GATGCCAAATCGC..................................................................................................................................................................................................................................................................................................................................................	28	6	0.17	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................GCGTTATAAAACAAA-AAGGCATGCC.................................................................................................................................................................................................................................................................................................................	25	12	0.17	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATCGCCTGGAAAGCGTTATAAAAA...............................................................................................................................................................................................................................................................................................................................	24	12	0.17	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................ATCGCCTGGAAAGCGTTATAAAAC...............................................................................................................................................................................................................................................................................................................................	24	12	0.17	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AAAATTGGTGCATTC-GATGCCAAATC....................................................................................................................................................................................................................................................................................................................................................	26	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................AAGCGTTATAAAACAAA-AAGGCA.....................................................................................................................................................................................................................................................................................................................	23	12	0.17	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................AAGCGTTATAAAACAAA-AAGGC......................................................................................................................................................................................................................................................................................................................	22	12	0.17	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................AAGCGTTATAAAACAAA-AAGGCATGCCG................................................................................................................................................................................................................................................................................................................	28	12	0.17	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................AACACAATTATTTAAG------T---TTTTG---------------------CC...........................................................................................................................................................................................................	24	13	0.15	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AAAATTGGTGCATTC-GATGCCA........................................................................................................................................................................................................................................................................................................................................................	22	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AAAATTGGTGCATTC-GATGCCAAAT.....................................................................................................................................................................................................................................................................................................................................................	25	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CCCTAATGGAAGAGTGGCACAAAATTGA..............................................................................................................................................................................................................................................................................................................................................................................................	28	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AAAATTGGTGCATTC-GATGCCAA.......................................................................................................................................................................................................................................................................................................................................................	23	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................TATTAATTTTTATCTCATG.......................................................................................................................................................................................................................................................................................	19	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................AATTTTTATCTCATGTTT....................................................................................................................................................................................................................................................................................	18	15	0.13	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTTTCC..................................................................................................................................................................................................................................................................................	29	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................GTATTAATTTTTATCTCATGTT.....................................................................................................................................................................................................................................................................................	22	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TATCTCATGTTTTATTTT-TTTAAATTT....................................................................................................................................................................................................................................................................	27	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................ATTAATTTTTATCTCATG.......................................................................................................................................................................................................................................................................................	18	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TAAGTATTAATTTTTATCTCATGTTT....................................................................................................................................................................................................................................................................................	26	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................TTTATCTCATGTTTTATTTT-TTTAAA.......................................................................................................................................................................................................................................................................	26	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................CTAAGTATTAATTTTTATCTCATGTTTG...................................................................................................................................................................................................................................................................................	28	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TTGCCCGAAAATTGGTGCATTC-GATGCC.........................................................................................................................................................................................................................................................................................................................................................	28	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAATGGAAGAGTGGCACAAAATTGAGC............................................................................................................................................................................................................................................................................................................................................................................................	27	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CCCTAATGGAAGAGTGGCACAAAAAA................................................................................................................................................................................................................................................................................................................................................................................................	26	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TTGCCCGAAAATTGGTGCATTC-GATGC..........................................................................................................................................................................................................................................................................................................................................................	27	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAATGGAAGAGTGGCACAAAATTGAGCA...........................................................................................................................................................................................................................................................................................................................................................................................	28	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TTGCCCGAAAATTGGTGCATTC-GATG...........................................................................................................................................................................................................................................................................................................................................................	26	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GTTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------A......	23	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................TTTGTTTTTTATT-TGTAAG......................................................................................................................................	19	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................TTTGTTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------.......	25	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGTTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AGC....	26	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TAATGGAAGAGTGGCACAAAATC................................................................................................................................................................................................................................................................................................................................................................................................	23	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GTTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AGCAACA	29	9	0.11	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TTT------GTCCCT---------ATGAAAATTACCA-TATTTT.........................................................................................................................................................	28	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................GAAAATTACCA-TATTTTTTGTTTTT.................................................................................................................................................	25	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GTTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AGCAAC.	28	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TTTTTGTTTTTTATT-TGTAAGGCT...................................................................................................................................	24	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TTTTTTGTTTTTTATT-TGTAAG......................................................................................................................................	22	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TTTTGTTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------.................	24	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................TTTGTTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AG.....	27	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................TTTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AG.....	23	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................TT------GTCCCT---------ATGAAAATTACCA-TATTTT.........................................................................................................................................................	27	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................ACTTTT------GTCCCT---------ATGAAAATTACCA-TAT............................................................................................................................................................	28	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................GCCCGAAAATTGGTGCATTC-GA.............................................................................................................................................................................................................................................................................................................................................................	22	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................T--AACACAATTATTTAAG------T---TTTTG---------------------CCAATA.......................................................................................................................................................................................................	29	10	0.10	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GGAAGAGTGGCACAAAATTGAGCCAAAT.......................................................................................................................................................................................................................................................................................................................................................................................	28	10	0.10	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................TGCCCGAAAATTGGTGCATTC-GAT............................................................................................................................................................................................................................................................................................................................................................	24	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TGGCACAAAATTGAGCCAAATGTTGC..................................................................................................................................................................................................................................................................................................................................................................................	26	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................TTAAG------T---TTTTG---------------------CCAATACTTTT------GTCCC.......................................................................................................................................................................................	27	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................TTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AG.....	21	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................TTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AGCAA..	22	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................TAAG------T---TTTTG---------------------CCAATACTTTT------G...........................................................................................................................................................................................	22	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................TTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AGCAACA	27	10	0.10	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................TGTTGCCCGAAAATTGGTGCATTC-GA.............................................................................................................................................................................................................................................................................................................................................................	26	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....ATGGAAGAGTGGCACAAAATTGAGCCAAA........................................................................................................................................................................................................................................................................................................................................................................................	29	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................ATTGAGCCAAATGTTGCCCGAAATA..........................................................................................................................................................................................................................................................................................................................................................................	25	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TATTTAAG------T---TTTTG---------------------CCAATACTTTT------G...........................................................................................................................................................................................	26	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................TTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AGCAAC.	23	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAAAATTGAGCCAAATGTTGCCAT...............................................................................................................................................................................................................................................................................................................................................................................	25	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TGAGCCAAATGTTGCCCGAAAATTGGT......................................................................................................................................................................................................................................................................................................................................................................	27	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................TTTAAG------T---TTTTG---------------------CCAATACTTTT------GTCCC.......................................................................................................................................................................................	28	10	0.10	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................AATTGAGCCAAATGTTGC..................................................................................................................................................................................................................................................................................................................................................................................	18	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................AAG------T---TTTTG---------------------CCAATACTTTT------G...........................................................................................................................................................................................	21	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................TTTTTATT-TGTAAGGCTT-----------------------------------------------------------------------------------------------------------------GA--------AG.....	22	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TTGAGCCAAATGTTGCCCGAAAA...........................................................................................................................................................................................................................................................................................................................................................................	23	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TTGCCCGAAAATTGGTGCATTC-G..............................................................................................................................................................................................................................................................................................................................................................	23	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................ATTC-GATGCCAAATCGCCTGG..............................................................................................................................................................................................................................................................................................................................................	21	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................TTT--AACACAATTATTTAAG------T---TTTTG---------------------CCAA.........................................................................................................................................................................................................	29	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATTTTCC.......................................................................................................................................................	25	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................TTT-TTTAAATTTT--AACACAATTATTTAAG------...........................................................................................................................................................................................................................................	29	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................ATGCCAAATCGCCTGGAAAGCGTT......................................................................................................................................................................................................................................................................................................................................	24	11	0.09	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TATTTTTC.......................................................................................................................................................	26	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........AGAGTGGCACAAAATTGAGCC...........................................................................................................................................................................................................................................................................................................................................................................................	21	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................GGTGCATTC-GATGCCAAATCGCC.................................................................................................................................................................................................................................................................................................................................................	23	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TTTT--AACACAATTATTTAAG------T---TTTTG---------------------CCC..........................................................................................................................................................................................................	29	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TGGCACAAAATTGAGCCAAAT.......................................................................................................................................................................................................................................................................................................................................................................................	21	11	0.09	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATTTTTTGTTT...................................................................................................................................................	29	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................TGGTGCATTC-GATGCCAAATCGCC.................................................................................................................................................................................................................................................................................................................................................	24	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................CATTC-GATGCCAAATCGCCTGGAAA...........................................................................................................................................................................................................................................................................................................................................	25	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................TCCCT---------ATGAAAATTACCA-TATTTTTTTA.....................................................................................................................................................	28	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TC-GATGCCAAATCGCCTGGAAAGC.........................................................................................................................................................................................................................................................................................................................................	24	11	0.09	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................TTTT--AACACAATTATTTAAG------T---TTTC...................................................................................................................................................................................................................................	25	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................C-GATGCCAAATCGCCTGGAAA...........................................................................................................................................................................................................................................................................................................................................	21	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATTTTTTT......................................................................................................................................................	26	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................ATGCCAAATCGCCTGGAAAGCGTTAT....................................................................................................................................................................................................................................................................................................................................	26	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TT--AACACAATTATTTAAG------T---TTTTG---------------------CCA..........................................................................................................................................................................................................	27	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................T---------ATGAAAATTACCA-TATTTTTTGT.....................................................................................................................................................	24	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TTT------GTCCCT---------ATGAAAATTAC..................................................................................................................................................................	20	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........GAAGAGTGGCACAAAATTGAGCC...........................................................................................................................................................................................................................................................................................................................................................................................	23	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................CCCT---------ATGAAAATTACCA-TATTTTTTC......................................................................................................................................................	26	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TTCTGATGGAGGAGTGGCTCAAAATTCCGGCTGATTTCACCCGGAAATTGGTGGCATC-GATGCCAAAACGGTTGGAAGAGACCAAGAAGCGAA-AGGGGTATCCAACCTCATATTAATTTTTA-A-ATTTTCATTGAAAAAAA-GTTATTTTTGGTTTTGTTTTTTAG------T---TTGTA---------------------CGCAAACTTTT------TCTAAG---------TG-AATTTTCGTT-GTTTTTTTCTTATTTAAAATATAAAAAAAA-------AAC-----------------TGTT-----------------------TA------------------------------ATAT---------------------TAT--------TTAAAAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..............................................................................GAGACCAAGAAGCGAA-AGGGGT.....................................................................................................................................................................................................................................................................................................................	22	8	2.00	16	4	0	0	0	6	6
..............................................................................GAGACCAAGAAGCGAA-AGGGGTATC..................................................................................................................................................................................................................................................................................................................	25	7	1.29	9	6	0	0	0	3	0
.............GTGGCTCAAAATTCCGGCTGATTTC....................................................................................................................................................................................................................................................................................................................................................................................	25	8	1.25	10	3	0	0	0	7	0
..............................................................................GAGACCAAGAAGCGAA-AGGGGTATCC.................................................................................................................................................................................................................................................................................................................	26	6	1.17	7	4	0	0	0	3	0
..............................................................................GAGACCAAGAAGCGAA-AGGGG......................................................................................................................................................................................................................................................................................................................	21	8	0.63	5	2	0	0	0	2	1
.............GTGGCTCAAAATTCCGGCTGATTTCACC.................................................................................................................................................................................................................................................................................................................................................................................	28	8	0.63	5	3	0	0	0	2	0
..............................................................................GAGACCAAGAAGCGAA-AGGG.......................................................................................................................................................................................................................................................................................................................	20	8	0.63	5	3	0	0	0	0	2
..............................................................................GAGACCAAGAAGCGAA-AGGGGTA....................................................................................................................................................................................................................................................................................................................	23	8	0.63	5	4	0	0	0	1	0
..............................................................................GAGACCAAGAAGCGAA-AGGGGTAT...................................................................................................................................................................................................................................................................................................................	24	7	0.57	4	2	0	0	0	2	0
.............GTGGCTCAAAATTCCGGCTGATTTCAC..................................................................................................................................................................................................................................................................................................................................................................................	27	8	0.25	2	2	0	0	0	0	0
.............GTGGCTCAAAATTCCGGCTGAT.......................................................................................................................................................................................................................................................................................................................................................................................	22	8	0.25	2	2	0	0	0	0	0
................................................................................................................................TTTTCATTGAAAAAAA-GTTATTTTTGGT.............................................................................................................................................................................................................................................................	28	5	0.20	1	0	0	0	0	1	0
.................................................................................................................................TTTCATTGAAAAAAA-GTTATTTTTGG..............................................................................................................................................................................................................................................................	26	5	0.20	1	1	0	0	0	0	0
................................................................................................................................TTTTCATTGAAAAAAA-GTTATTTTTGG..............................................................................................................................................................................................................................................................	27	5	0.20	1	1	0	0	0	0	0
......................................................................................GAAGCGAA-AGGGGTATCCAAC..............................................................................................................................................................................................................................................................................................................	21	6	0.17	1	1	0	0	0	0	0
...TGATGGAGGAGTGGCTCAAAATTCCGG............................................................................................................................................................................................................................................................................................................................................................................................	27	6	0.17	1	1	0	0	0	0	0
....................................................................................AAGAAGCGAA-AGGGGTATCCAACC.............................................................................................................................................................................................................................................................................................................	24	6	0.17	1	0	0	0	0	0	1
...............................................TTGGTGGCATC-GATGCCAAAACGGT.................................................................................................................................................................................................................................................................................................................................................	25	6	0.17	1	0	0	0	0	1	0
..............................................................................GAGACCAAGAAGCGAA-AGGGGTATCCC................................................................................................................................................................................................................................................................................................................	27	7	0.14	1	1	0	0	0	0	0
...............................................................................AGACCAAGAAGCGAA-AGGGGTAT...................................................................................................................................................................................................................................................................................................................	23	7	0.14	1	1	0	0	0	0	0
.....................................CACCCGGAAATTGGTGGCATC-G..............................................................................................................................................................................................................................................................................................................................................................	22	7	0.14	1	1	0	0	0	0	0
.............GTGGCTCAAAATTCCGGCTGATT......................................................................................................................................................................................................................................................................................................................................................................................	23	8	0.13	1	1	0	0	0	0	0
.............................................................TGCCAAAACGGTTGGAAGAGACC......................................................................................................................................................................................................................................................................................................................................	23	8	0.13	1	1	0	0	0	0	0
..............TGGCTCAAAATTCCGGCTGATTTCACC.................................................................................................................................................................................................................................................................................................................................................................................	27	8	0.13	1	0	0	0	0	1	0
...............................................................CCAAAACGGTTGGAAGAGACC......................................................................................................................................................................................................................................................................................................................................	21	8	0.13	1	1	0	0	0	0	0
..............................................................................GAGACCAAGAAGCGAA-AG.........................................................................................................................................................................................................................................................................................................................	18	8	0.13	1	1	0	0	0	0	0
.............GTGGCTCAAAATTCCGGCTGATTT.....................................................................................................................................................................................................................................................................................................................................................................................	24	8	0.13	1	1	0	0	0	0	0
.............GTGGCTCAAAATTCCGGCTGATTTCACCT................................................................................................................................................................................................................................................................................................................................................................................	29	8	0.13	1	1	0	0	0	0	0
...............................................................................AGACCAAGAAGCGAA-AGGGGTAA...................................................................................................................................................................................................................................................................................................................	23	8	0.13	1	1	0	0	0	0	0
................................................................................GACCAAGAAGCGAA-AGGGGT.....................................................................................................................................................................................................................................................................................................................	20	8	0.13	1	1	0	0	0	0	0
..............................................................................GAGACCAAGAAGCGAA-AGGGGC.....................................................................................................................................................................................................................................................................................................................	22	8	0.13	1	0	0	0	0	1	0
.............GTGGCTCAAAATTCCGGCTGATC......................................................................................................................................................................................................................................................................................................................................................................................	23	8	0.13	1	1	0	0	0	0	0
...............................................................................AGACCAAGAAGCGAA-AGGGGTA....................................................................................................................................................................................................................................................................................................................	22	8	0.13	1	1	0	0	0	0	0
..............TGGCTCAAAATTCCGGCTGATTT.....................................................................................................................................................................................................................................................................................................................................................................................	23	8	0.13	1	1	0	0	0	0	0
....................................................................................................................................................................................................................TTTT------TCTAAG---------TG-AATTTTCGTC-...............................................................................................................................................................	22	11	0.09	1	0	0	0	1	0	0
.......................................................................................................................................................................................................................T------TCTAAG---------TG-AATTTTCGTT-GTTTTT.........................................................................................................................................................	25	13	0.08	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................T------TCTAAG---------TG-AATTTTCGTT-GTTTTTC........................................................................................................................................................	26	13	0.08	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................T------TCTAAG---------TG-AATTTTCGTT-GTTTT..........................................................................................................................................................	24	13	0.08	1	0	0	0	0	0	1

droGri2

CTCTGCTGGAGGAGTGGAGCAAAATTAGTCCAGAAACGACCCGGAAGCTGGTATCTTC-CATGAACAATAGGTTAAGGGGAGTTATTAAGGCTA-AAGGATATCATACTAAGTATTAACATCCT-T----------ATTTAAGT-T-----------------------------T---TTATACGCCAAATATGTTACT-TTTCTCTAGACTGTT------GA---A---------ATAAGCT-TTGACCTGTAT----------------------------------------------------------------TTTGGATAAGTTTTCAGTTTTTGACTAATTTTGGTTAATTAATTAATATTT---------------------TAA--------TGAAAAC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...........................GTCCAGAAACGACCCGGAAGCTGG.......................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	1

dp5

TCATCATGGAGGAATGGGGCAAAATAACTACCGAGGACACCAGGAATCTGGTTGACTC-AATGCCTAGACGTCTGGCAGATGTTTTAAAACAAA-AGGGATATCCCACCAAATATAAAC----------------------------------------AATTTCGAATTTTAGTG---TTGTACGCAGAAT-TGTTACAGTGTATGAAGACTTTT------GA-GGC---------GTCAAAT-TTGCCTTGTTTTTTTT--------------AATGAT-------TTTTTTTTCCTTTTAAGAATAG---------------------------------------------------------AATA---------------------GAA--------TAAAAAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-TGTTAC...................................................................................................................................................................................................................	24	1	52.00	52	0	25	1	0	1	0	0	25	0	0
..................................................GTTGACTC-AATGCCTAGACGTCTGG..............................................................................................................................................................................................................................................................................................................................................	25	14	19.29	270	0	185	2	0	2	0	0	68	13	0
......................................................ACTC-AATGCCTAGACGTCTGG..............................................................................................................................................................................................................................................................................................................................................	21	15	17.20	258	0	233	0	0	0	0	22	2	0	1
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-TGTTACAG.................................................................................................................................................................................................................	26	1	15.00	15	0	6	0	0	0	0	0	8	1	0
..................................................GTTGACTC-AATGCCTAGACGTCTG...............................................................................................................................................................................................................................................................................................................................................	24	14	13.21	185	0	162	1	0	1	0	2	15	4	0
.......................................................CTC-AATGCCTAGACGTCTGGC.............................................................................................................................................................................................................................................................................................................................................	21	14	13.14	184	0	171	0	3	0	1	9	0	0	0
........................TAACTACCGAGGACACCAGGAATC..........................................................................................................................................................................................................................................................................................................................................................................	24	2	12.50	25	0	16	3	1	0	0	0	5	0	0
.................................................................................................................................................................TTTCGAATTTTAGTG---TTGTACGC...............................................................................................................................................................................................................................	23	2	12.00	24	0	0	0	0	0	0	0	20	4	0
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-TGTTA....................................................................................................................................................................................................................	23	2	11.50	23	0	13	0	0	0	0	0	10	0	0
...................................................TTGACTC-AATGCCTAGACGTC.................................................................................................................................................................................................................................................................................................................................................	21	14	9.79	137	1	124	0	1	0	1	9	0	0	1
..................................................GTTGACTC-AATGCCTAGACGTCTGGC.............................................................................................................................................................................................................................................................................................................................................	26	13	7.62	99	0	89	1	0	1	0	0	7	1	0
................................................TGGTTGACTC-AATGCCTAGACGTC.................................................................................................................................................................................................................................................................................................................................................	24	13	7.23	94	0	73	5	1	0	0	1	14	0	0
.................................................................................................................................................................TTTCGAATTTTAGTG---TTGTACGCAGA............................................................................................................................................................................................................................	26	2	7.00	14	0	0	0	0	0	0	0	12	2	0
.................................................................................................................................................................TTTCGAATTTTAGTG---TTGTACGCAG.............................................................................................................................................................................................................................	25	2	7.00	14	0	0	0	0	0	0	0	10	4	0
................................................TGGTTGACTC-AATGCCTAGACGT..................................................................................................................................................................................................................................................................................................................................................	23	13	6.92	90	0	80	4	0	3	0	1	2	0	0
........................TAACTACCGAGGACACCAGGAAT...........................................................................................................................................................................................................................................................................................................................................................................	23	2	6.50	13	0	10	0	0	0	0	0	2	1	0
................................................................CTAGACGTCTGGCAGATGTTT.....................................................................................................................................................................................................................................................................................................................................	21	13	6.31	82	2	77	0	0	0	0	3	0	0	0
.....................................................GACTC-AATGCCTAGACGTCTG...............................................................................................................................................................................................................................................................................................................................................	21	15	5.53	83	0	81	0	0	0	0	2	0	0	0
................................................TGGTTGACTC-AATGCCTAGACG...................................................................................................................................................................................................................................................................................................................................................	22	13	5.38	70	0	68	0	0	0	0	0	2	0	0
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-TGTTACA..................................................................................................................................................................................................................	25	1	5.00	5	0	4	0	0	0	0	0	0	1	0
.................................................GGTTGACTC-AATGCCTAGACGTC.................................................................................................................................................................................................................................................................................................................................................	23	14	4.57	64	0	60	2	0	1	0	0	1	0	0
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-TGTT.....................................................................................................................................................................................................................	22	2	4.50	9	0	7	0	0	1	0	0	1	0	0
.................................................GGTTGACTC-AATGCCTAGACG...................................................................................................................................................................................................................................................................................................................................................	21	14	4.29	60	0	60	0	0	0	0	0	0	0	0
..................................................GTTGACTC-AATGCCTAGACGT..................................................................................................................................................................................................................................................................................................................................................	21	14	4.21	59	0	52	0	0	0	0	7	0	0	0
........................................................TC-AATGCCTAGACGTCTGGC.............................................................................................................................................................................................................................................................................................................................................	20	14	4.00	56	0	53	0	0	0	0	3	0	0	0
.................................................................................................................................................................................................TGTTACAGTGTATGAAGACTTTT------GA-.........................................................................................................................................................................................	25	1	4.00	4	0	0	0	0	0	0	0	4	0	0
........................TAACTACCGAGGACACCAGGAATCTG........................................................................................................................................................................................................................................................................................................................................................................	26	2	4.00	8	0	2	1	0	0	0	0	4	1	0
....................................................TGACTC-AATGCCTAGACGTCT................................................................................................................................................................................................................................................................................................................................................	21	15	3.73	56	0	51	0	0	0	0	5	0	0	0
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-TGTTAA...................................................................................................................................................................................................................	24	2	3.50	7	0	2	1	0	4	0	0	0	0	0
....................AAAATAACTACCGAGGACACCAG...............................................................................................................................................................................................................................................................................................................................................................................	23	2	3.50	7	0	1	0	0	0	0	0	6	0	0
...............................................................CCTAGACGTCTGGCAGATGTT......................................................................................................................................................................................................................................................................................................................................	21	13	3.15	41	1	36	0	0	0	0	4	0	0	0
........................................................TC-AATGCCTAGACGTCTGGCA............................................................................................................................................................................................................................................................................................................................................	21	14	3.07	43	0	43	0	0	0	0	0	0	0	0
....................AAAATAACTACCGAGGACACCAGGAA............................................................................................................................................................................................................................................................................................................................................................................	26	2	3.00	6	0	1	1	0	0	0	0	4	0	0
..................................................................................TTTTAAAACAAA-AGGGATATCCCACCA............................................................................................................................................................................................................................................................................................................	27	1	3.00	3	0	3	0	0	0	0	0	0	0	0
...............................................................................................................ATATAAAC----------------------------------------AATTTCGAATTTTAGT...........................................................................................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	3	0
.................................................GGTTGACTC-AATGCCTAGACGTCTG...............................................................................................................................................................................................................................................................................................................................................	25	14	2.93	41	0	39	0	0	0	0	0	2	0	0
..................................................GTTGACTC-AATGCCTAGACGTCT................................................................................................................................................................................................................................................................................................................................................	23	14	2.93	41	0	38	2	0	0	0	1	0	0	0
..................................................GTTGACTC-AATGCCTAGACGTC.................................................................................................................................................................................................................................................................................................................................................	22	14	2.86	40	0	40	0	0	0	0	0	0	0	0
.................................................GGTTGACTC-AATGCCTAGACGTCT................................................................................................................................................................................................................................................................................................................................................	24	14	2.79	39	0	35	2	0	1	0	1	0	0	0
..................................................GTTGACTC-AATGCCTAGACGTCTGGCA............................................................................................................................................................................................................................................................................................................................................	27	13	2.77	36	0	36	0	0	0	0	0	0	0	0
.................................................GGTTGACTC-AATGCCTAGACGTCTGG..............................................................................................................................................................................................................................................................................................................................................	26	14	2.50	35	0	29	3	0	0	0	0	3	0	0
..............TGGGGCAAAATAACTACCGAGGA.....................................................................................................................................................................................................................................................................................................................................................................................	23	2	2.50	5	0	5	0	0	0	0	0	0	0	0
.................................................................................................................................................................TTTCGAATTTTAGTG---TTGTACG................................................................................................................................................................................................................................	22	2	2.50	5	0	0	0	0	0	0	0	5	0	0
....................AAAATAACTACCGAGGACACCAGG..............................................................................................................................................................................................................................................................................................................................................................................	24	2	2.50	5	0	5	0	0	0	0	0	0	0	0
..............TGGGGCAAAATAACTACCGAGGACAC..................................................................................................................................................................................................................................................................................................................................................................................	26	2	2.50	5	0	3	0	0	0	0	0	2	0	0
.................................................GGTTGACTC-AATGCCTAGACGT..................................................................................................................................................................................................................................................................................................................................................	22	14	2.14	30	0	28	0	0	0	0	2	0	0	0
...................................................TTGACTC-AATGCCTAGACGTCTGG..............................................................................................................................................................................................................................................................................................................................................	24	14	2.14	30	0	28	0	0	0	0	2	0	0	0
................................................TGGTTGACTC-AATGCCTAGAC....................................................................................................................................................................................................................................................................................................................................................	21	13	2.08	27	0	25	0	0	0	0	0	0	2	0
..............TGGGGCAAAATAACTACCGAGG......................................................................................................................................................................................................................................................................................................................................................................................	22	2	2.00	4	0	4	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-TGTTACAA.................................................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTAGTG---TTGTACGCAGAAT-TGTTACA..................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	2	0
............................TACCGAGGACACCAGGAATCT.........................................................................................................................................................................................................................................................................................................................................................................	21	2	2.00	4	0	4	0	0	0	0	0	0	0	0
....................AAAATAACTACCGAGGACACCAGGA.............................................................................................................................................................................................................................................................................................................................................................................	25	2	2.00	4	0	4	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGTG---TTGTACGCAGAAT-TGTTAC...................................................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................TGAAGACTTTT------GA-GGC---------GTCAAAT-T....................................................................................................................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................TAAAC----------------------------------------AATTTCGAATTTTAGT...........................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	2	0	0
..................GCAAAATAACTACCGAGGACA...................................................................................................................................................................................................................................................................................................................................................................................	21	2	2.00	4	0	0	0	0	0	0	0	4	0	0
.....................................................................................TAAAACAAA-AGGGATATCCCACCAAA..........................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	1	0	0	0	0	0	1	0	0
..............TGGGGCAAAATAACTACCGAGGAC....................................................................................................................................................................................................................................................................................................................................................................................	24	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................GTCAAAT-TTGCCTTGTTTTTT.......................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	2	0	0
....................................................TGACTC-AATGCCTAGACGTCTGG..............................................................................................................................................................................................................................................................................................................................................	23	15	1.87	28	0	20	0	0	2	0	0	2	4	0
.......................................................CTC-AATGCCTAGACGTCTGG..............................................................................................................................................................................................................................................................................................................................................	20	15	1.60	24	0	21	0	0	0	0	0	0	3	0
........................TAACTACCGAGGACACCAGGAA............................................................................................................................................................................................................................................................................................................................................................................	22	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.........................AACTACCGAGGACACCAGGAATC..........................................................................................................................................................................................................................................................................................................................................................................	23	2	1.50	3	0	2	1	0	0	0	0	0	0	0
............................TACCGAGGACACCAGGAATCTG........................................................................................................................................................................................................................................................................................................................................................................	22	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.........................AACTACCGAGGACACCAGGAATCTG........................................................................................................................................................................................................................................................................................................................................................................	25	2	1.50	3	0	1	2	0	0	0	0	0	0	0
.................GGCAAAATAACTACCGAGGACA...................................................................................................................................................................................................................................................................................................................................................................................	22	2	1.50	3	0	2	0	0	0	0	0	1	0	0
...................................................TTGACTC-AATGCCTAGACGTCTG...............................................................................................................................................................................................................................................................................................................................................	23	14	1.29	18	0	18	0	0	0	0	0	0	0	0
..............................................TCTGGTTGACTC-AATGCCTAGACG...................................................................................................................................................................................................................................................................................................................................................	24	4	1.25	5	0	3	0	0	0	0	0	2	0	0
................................................TGGTTGACTC-AATGCCTAGACGTCT................................................................................................................................................................................................................................................................................................................................................	25	13	1.23	16	0	14	1	0	0	0	1	0	0	0
.........................................................C-AATGCCTAGACGTCTGGCA............................................................................................................................................................................................................................................................................................................................................	20	14	1.21	17	0	17	0	0	0	0	0	0	0	0
............................................................ATGCCTAGACGTCTGGCAGA..........................................................................................................................................................................................................................................................................................................................................	20	14	1.21	17	0	17	0	0	0	0	0	0	0	0
............................................................ATGCCTAGACGTCTGGCAGAT.........................................................................................................................................................................................................................................................................................................................................	21	13	1.15	15	0	15	0	0	0	0	0	0	0	0
..................................................GTTGACTC-AATGCCTAGACG...................................................................................................................................................................................................................................................................................................................................................	20	14	1.14	16	0	14	0	0	0	0	0	1	1	0
................................................................CTAGACGTCTGGCAGATGTT......................................................................................................................................................................................................................................................................................................................................	20	13	1.08	14	0	13	0	0	0	0	1	0	0	0
.................................AGGACACCAGGAATCTG........................................................................................................................................................................................................................................................................................................................................................................	17	4	1.00	4	0	0	0	0	0	0	0	4	0	0
...........................CTACCGAGGACACCAGGAATCT.........................................................................................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..............TGGGGCAAAATAACTACCGAGGACACC.................................................................................................................................................................................................................................................................................................................................................................................	27	2	1.00	2	0	1	1	0	0	0	0	0	0	0
.........................AACTACCGAGGACACCAGGAAT...........................................................................................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	0	1	0	1	0	0	0	0	0
.....................................................................................TAAAACAAA-AGGGATATCCCACCAA...........................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................TAAAACAAA-AGGGATATCCCACCA............................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................GTACGCAGAAT-TGTTACAGTGTAT............................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0
................................................................................TGTTTTAAAACAAA-AGGGATATCC.................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................GGCAAAATAACTACCGAGGACACC.................................................................................................................................................................................................................................................................................................................................................................................	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................AAAATAACTACCGAGGACACCAGGAATC..........................................................................................................................................................................................................................................................................................................................................................................	28	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-TG.......................................................................................................................................................................................................................	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................TAAAACAAA-AGGGATATCCCACC.............................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................TAACTACCGAGGACACCAGGAATCT.........................................................................................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	1	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................ACAGTGTATGAAGACTTTT------GA-GGC---------.............................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-TGT......................................................................................................................................................................................................................	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
TCATCATGGAGGAATGGGGCAAAA..................................................................................................................................................................................................................................................................................................................................................................................................	24	2	1.00	2	0	1	0	0	0	0	1	0	0	0
..................................................................................................................................................................TTCGAATTTTAGTG---TTGTACGCAG.............................................................................................................................................................................................................................	24	2	1.00	2	0	0	0	0	0	0	0	2	0	0
.........................................................................................................................................................................................................TGTATGAAGACTTTT------GA-GGC---------GTCAAAT-.....................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................CCACCAAATATAAAC----------------------------------------AATTTCGA...................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................TAACTACCGAGGACACCAGG..............................................................................................................................................................................................................................................................................................................................................................................	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................TGTTTTAAAACAAA-AGGGATATCCCACC.............................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................AACTACCGAGGACACCAGGA.............................................................................................................................................................................................................................................................................................................................................................................	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TACAGTGTATGAAGACTTTT------GA-GG.......................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................TTTTAAAACAAA-AGGGATATCCCACC.............................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TACAGTGTATGAAGACTTTT------GA-GGC---------.............................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0
....................................................................................................................................................................................................TACAGTGTATGAAGACTTTT------GA-GGC---------G............................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................GCCTAGACGTCTGGCAGATGT.......................................................................................................................................................................................................................................................................................................................................	21	13	1.00	13	0	13	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-TGTTACAGTG...............................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TATGAAGACTTTT------GA-GGC---------GTC..........................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TGTATGAAGACTTTT------GA-GG.......................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TATGAAGACTTTT------GA-GGC---------GTCAAA.......................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................ACAGTGTATGAAGACTTTT------GA-GGC---------G............................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................GTCTGGCAGATGTTTTAAAACAAA-AGG........................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................TACCGAGGACACCAGGAATCTGG.......................................................................................................................................................................................................................................................................................................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ATGAAGACTTTT------GA-GGC---------GTCAAAT-T....................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................TTTCGAATTTTAGTG---TTGTACGCAGAA...........................................................................................................................................................................................................................	27	2	1.00	2	0	0	0	0	0	0	0	1	1	0
.....................................................................................................................................................................................................................................................................................................TTTCCTTTTAAGAATAG---------------------------------------------------------AATA---------------------GAA--------.......	24	1	1.00	1	0	0	0	0	0	0	0	1	0	0
..................................................................................................................................................................TTCGAATTTTAGTG---TTGTACGCAGAA...........................................................................................................................................................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	2	0	0
........................................................TC-AATGCCTAGACGTCTGG..............................................................................................................................................................................................................................................................................................................................................	19	15	0.93	14	0	12	0	0	0	0	1	0	1	0
.................................................GGTTGACTC-AATGCCTAGAC....................................................................................................................................................................................................................................................................................................................................................	20	14	0.86	12	0	12	0	0	0	0	0	0	0	0
.........................................................C-AATGCCTAGACGTCTGGC.............................................................................................................................................................................................................................................................................................................................................	19	14	0.86	12	0	12	0	0	0	0	0	0	0	0
...................................................TTGACTC-AATGCCTAGACGTCTGGC.............................................................................................................................................................................................................................................................................................................................................	25	13	0.85	11	0	11	0	0	0	0	0	0	0	0
......................................................ACTC-AATGCCTAGACGTCTG...............................................................................................................................................................................................................................................................................................................................................	20	15	0.80	12	0	12	0	0	0	0	0	0	0	0
....................................................TGACTC-AATGCCTAGACGTCTGGC.............................................................................................................................................................................................................................................................................................................................................	24	14	0.79	11	0	10	1	0	0	0	0	0	0	0
....................................................TGACTC-AATGCCTAGACGTC.................................................................................................................................................................................................................................................................................................................................................	20	15	0.73	11	0	10	0	0	0	0	1	0	0	0
..............................................................GCCTAGACGTCTGGCAGATG........................................................................................................................................................................................................................................................................................................................................	20	13	0.69	9	0	9	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................TTTTT--------------AATGAT-------TTTTTTTTCC................................................................................................................	21	12	0.67	8	0	7	0	1	0	0	0	0	0	0
....................................................TGACTC-AATGCCTAGACGTCTGGCA............................................................................................................................................................................................................................................................................................................................................	25	14	0.64	9	0	9	0	0	0	0	0	0	0	0
................................................TGGTTGACTC-AATGCCTAG......................................................................................................................................................................................................................................................................................................................................................	19	13	0.62	8	0	8	0	0	0	0	0	0	0	0
.....................................................GACTC-AATGCCTAGACGTCT................................................................................................................................................................................................................................................................................................................................................	20	15	0.60	9	0	9	0	0	0	0	0	0	0	0
...................................................TTGACTC-AATGCCTAGACGT..................................................................................................................................................................................................................................................................................................................................................	20	14	0.57	8	0	8	0	0	0	0	0	0	0	0
................................................TGGTTGACTC-AATGCCTAGA.....................................................................................................................................................................................................................................................................................................................................................	20	13	0.54	7	0	7	0	0	0	0	0	0	0	0
.................................................................TAGACGTCTGGCAGATGTTT.....................................................................................................................................................................................................................................................................................................................................	20	13	0.54	7	0	7	0	0	0	0	0	0	0	0
................................................TGGTTGACTC-AATGCCTAGACGTCTG...............................................................................................................................................................................................................................................................................................................................................	26	13	0.54	7	0	7	0	0	0	0	0	0	0	0
.....................................................GACTC-AATGCCTAGACGTCTGG..............................................................................................................................................................................................................................................................................................................................................	22	15	0.53	8	0	7	0	0	0	0	0	0	1	0
...............GGGGCAAAATAACTACCGAG.......................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........GAATGGGGCAAAATAACTACCGA........................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	1	0	0
...............GGGGCAAAATAACTACCGAGGA.....................................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................TTTCGAATTTTAGTG---TTGTAC.................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	1	0	0	0	0	0
..ATCATGGAGGAATGGGGC......................................................................................................................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............GGGGCAAAATAACTACCGAGG......................................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............ATGGGGCAAAATAACTACCGAGGA.....................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........GGAATGGGGCAAAATAACTACCGAGG......................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................AAATAACTACCGAGGACACC.................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGTG---TTGTACGCAGAAT-TGTTA....................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................GGCAAAATAACTACCGAGGACACCT................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	1	0	0	0	0	0	0	0
TCATCATGGAGGAATGGGGCAAA...................................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
TCATCATGGAGGAATGGGGC......................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	1	0	0	0	0	0
.........................AACTACCGAGGACACCAGGAATCT.........................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TAGTG---TTGTACGCAGAAT-G........................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	1	0	0	0	0	0
....CATGGAGGAATGGGGCAAAAT.................................................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................AATTTTAGTG---TTGTACGCAGA............................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................GGCAAAATAACTACCGAGGACAC..................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................CTACCGAGGACACCAGGAATCTGG.......................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............TGGGGCAAAATAACTACCGAGAC.....................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................TAACTACCGAGGACACCAGGA.............................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................TACCGAGGACACCAGGAATCTGGT......................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................TAACTACCGAGGACACCAGGAATAA.........................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	1	0	0	0	0	0	0	0
......................AATAACTACCGAGGACAC..................................................................................................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................AAAATAACTACCGAGGACACCAGGAAT...........................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................GGCAAAATAACTACCGAGGACACCAGG..............................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................TAACTACCGAGGACACCAGGAAA...........................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................ATAACTACCGAGGACACCAGGAATC..........................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................ACTACCGAGGACACCAGG..............................................................................................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................TAACTACCGAGGACACCAGGAATCTT........................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................AGACTTTT------GA-GGC---------GTCAAAT-TG...................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.CATCATGGAGGAATGGGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................TAACTACCGAGGACACCAGGAATCTGG.......................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................TACCGAGGACACCAGGAA............................................................................................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................CAAAATAACTACCGAGGACAC..................................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	1	0
..............TGGGGCAAAATAACTACCGAGGACACCA................................................................................................................................................................................................................................................................................................................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................TTTCGAATTTTAGTG---TTGTACGCA..............................................................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	1	0	0
.CATCATGGAGGAATGGGGCAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................GGGCAAAATAACTACCGAGGAC....................................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................ACTC-AATGCCTAGACGTCTGGC.............................................................................................................................................................................................................................................................................................................................................	22	14	0.50	7	0	7	0	0	0	0	0	0	0	0
...........GAATGGGGCAAAATAACTACCGAGG......................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................ACTACCGAGGACACCAGGAATCTG........................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.CATCATGGAGGAATGGGGCAAAA..................................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................AAAATAACTACCGAGGACACCAA...............................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................TAACTACCGAGGACACCAG...............................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............TGGGGCAAAATAACTACCGAGGT.....................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	0	1	0	0	0	0	0	0	0
..............TGGGGCAAAATAACTACCGAGGACACA.................................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................TAACTACCGAGGACACCAGGAC............................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	1	0	0	0	0	0	0	0
.................................................GGTTGACTC-AATGCCTAGACGTCTGGC.............................................................................................................................................................................................................................................................................................................................................	27	13	0.46	6	0	6	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................TTTT--------------AATGAT-------TTTTTTTTCCT...............................................................................................................	21	12	0.42	5	0	5	0	0	0	0	0	0	0	0
.................................................................TAGACGTCTGGCAGATGTTTT....................................................................................................................................................................................................................................................................................................................................	21	13	0.38	5	0	4	1	0	0	0	0	0	0	0
.............................................................TGCCTAGACGTCTGGCAGATG........................................................................................................................................................................................................................................................................................................................................	21	13	0.38	5	0	5	0	0	0	0	0	0	0	0
..................................................GTTGACTC-AATGCCTAGACGTCTGGCAG...........................................................................................................................................................................................................................................................................................................................................	28	13	0.38	5	0	2	0	0	0	0	0	3	0	0
....................................................TGACTC-AATGCCTAGACGTCTGGCAGA..........................................................................................................................................................................................................................................................................................................................................	27	14	0.36	5	0	5	0	0	0	0	0	0	0	0
......................................................ACTC-AATGCCTAGACGTCTGGT.............................................................................................................................................................................................................................................................................................................................................	22	15	0.33	5	0	4	0	0	0	0	1	0	0	0
................................................................................TGTTTTAAAACAAA-AGGGAA.....................................................................................................................................................................................................................................................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TTTTTT--------------AATGAT-------TTTTTTTTC.................................................................................................................	21	12	0.33	4	0	4	0	0	0	0	0	0	0	0
....................................................TGACTC-AATGCCTAGACGTCTG...............................................................................................................................................................................................................................................................................................................................................	22	15	0.33	5	0	5	0	0	0	0	0	0	0	0
................................................TGGTTGACTC-AATGCCTAGACGTCTGG..............................................................................................................................................................................................................................................................................................................................................	27	13	0.31	4	0	4	0	0	0	0	0	0	0	0
...................................................TTGACTC-AATGCCTAGACGTCTGGCA............................................................................................................................................................................................................................................................................................................................................	26	13	0.31	4	0	4	0	0	0	0	0	0	0	0
..................................................GTTGACTC-AATGCCTAGAC....................................................................................................................................................................................................................................................................................................................................................	19	14	0.29	4	0	4	0	0	0	0	0	0	0	0
...................................................TTGACTC-AATGCCTAGACG...................................................................................................................................................................................................................................................................................................................................................	19	14	0.29	4	0	4	0	0	0	0	0	0	0	0
....................................................TGACTC-AATGCCTAGACGTCTGGCAG...........................................................................................................................................................................................................................................................................................................................................	26	14	0.29	4	0	4	0	0	0	0	0	0	0	0
......TGGAGGAATGGGGCAAAATT................................................................................................................................................................................................................................................................................................................................................................................................	20	11	0.27	3	0	3	0	0	0	0	0	0	0	0
............................................AATCTGGTTGACTC-AATGCCT........................................................................................................................................................................................................................................................................................................................................................	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...............................................CTGGTTGACTC-AATGCCTAGA.....................................................................................................................................................................................................................................................................................................................................................	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..............................................TCTGGTTGACTC-AATGCCTAGACGTC.................................................................................................................................................................................................................................................................................................................................................	26	4	0.25	1	0	0	0	0	0	0	0	0	1	0
.........................................AGGAATCTGGTTGACTC-...............................................................................................................................................................................................................................................................................................................................................................	17	4	0.25	1	0	0	0	0	0	0	0	1	0	0
...............................................CTGGTTGACTC-AATGCCTAGACG...................................................................................................................................................................................................................................................................................................................................................	23	4	0.25	1	0	1	0	0	0	0	0	0	0	0
................................................................CTAGACGTCTGGCAGATGT.......................................................................................................................................................................................................................................................................................................................................	19	13	0.23	3	1	1	0	1	0	0	0	0	0	0
.......................................................................TCTGGCAGATGTTTTAAAA................................................................................................................................................................................................................................................................................................................................	19	13	0.23	3	0	3	0	0	0	0	0	0	0	0
................................................TGGTTGACTC-AATGCCTAGACGTCTA...............................................................................................................................................................................................................................................................................................................................................	26	13	0.23	3	0	0	0	0	0	0	0	3	0	0
.....................................................GACTC-AATGCCTAGACGTCTGGCA............................................................................................................................................................................................................................................................................................................................................	24	14	0.21	3	0	3	0	0	0	0	0	0	0	0
.........................................................C-AATGCCTAGACGTCTGGCAG...........................................................................................................................................................................................................................................................................................................................................	21	14	0.21	3	0	3	0	0	0	0	0	0	0	0
.............................................................TGCCTAGACGTCTGGCAGA..........................................................................................................................................................................................................................................................................................................................................	19	14	0.21	3	0	3	0	0	0	0	0	0	0	0
...........................................................AATGCCTAGACGTCTGGCAG...........................................................................................................................................................................................................................................................................................................................................	20	14	0.21	3	0	3	0	0	0	0	0	0	0	0
.......................................................CTC-AATGCCTAGACGTCTG...............................................................................................................................................................................................................................................................................................................................................	19	16	0.19	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................GTTTTTTTT--------------AATGAT-------TTTTTT....................................................................................................................	21	12	0.17	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TTTTTTT--------------AATGAT-------TTTTTTTT..................................................................................................................	21	12	0.17	2	0	2	0	0	0	0	0	0	0	0
................................................TGGTTGACTC-AATGCCTAGACGTCTGGC.............................................................................................................................................................................................................................................................................................................................................	28	12	0.17	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TTTTTTTT--------------AATGAT-------TTTTTTTT..................................................................................................................	22	12	0.17	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TTTTTTTT--------------AATGAT-------TTTTTTT...................................................................................................................	21	13	0.15	2	0	2	0	0	0	0	0	0	0	0
.............................................................TGCCTAGACGTCTGGCAGATGTTT.....................................................................................................................................................................................................................................................................................................................................	24	13	0.15	2	0	2	0	0	0	0	0	0	0	0
..................................................................AGACGTCTGGCAGATGTTT.....................................................................................................................................................................................................................................................................................................................................	19	13	0.15	2	0	2	0	0	0	0	0	0	0	0
................................................TGGTTGACTC-AATGCCTAGACA...................................................................................................................................................................................................................................................................................................................................................	22	13	0.15	2	0	2	0	0	0	0	0	0	0	0
...............................................................CCTAGACGTCTGGCAGATGTTT.....................................................................................................................................................................................................................................................................................................................................	22	13	0.15	2	0	2	0	0	0	0	0	0	0	0
................................................TGGTTGACTC-AATGCCTAGACGTCC................................................................................................................................................................................................................................................................................................................................................	25	13	0.15	2	0	0	2	0	0	0	0	0	0	0
.......................................................................TCTGGCAGATGTTTTAAAAC...............................................................................................................................................................................................................................................................................................................................	20	13	0.15	2	0	1	0	0	0	0	1	0	0	0

droPer2

GGCTTCAAGAAGAGTGGGCCAAAATTGGTCATGAATATACACAAAATATAATAAAAAA-TATGCCAAAACGCCTAGCCGATACCATAAATAATA-ATGGCTATCACACAAAATATTAAATTAAG-TTATTTTTCTAGATTAAGT-AGTTAT-TTTTT-AGTTGTATAAG------GTAATGTAA---------------------CGCATATCTTGAGGCTCCCTCA----------TT-AAAATTGTTG-TAT------TTTTTTTGT-AGTTTAATGCA-------TTT----------------TATTC-------------------------------------------------------GCGTTTGA-----------------AGT--------TGAAAAA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...........................................................TATGCCAAAACGCCTAGCCGA..........................................................................................................................................................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0

droAna3

TGGTGGTGGAAGAATGGCTTAATATTTCCCCAACGGTGACTGAAAAATTGGTGCAATC-AATGCCAAACCGTTTGGCGTAAGCTATCAAAAGAA-AGAGGTACTCCACTTCTTATTAATTAATA-G----------TATTAAGT-ATCATT-ATTAACCAACTTGGAAG------T---TTAT-------------------------AAATTTTT------TCTGGC---------TA-AAAATTCGTC-ACTTTTTCGTTTTTTAAT-TTTAATAAAAT-------AAA----------------TTAAG-------------------------------------------------------CTATTA-------------------TAC--------CGAAAAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

TGATCTTGGATGAGTGGAGGAAAATACCACCTGCTTTCACTGAAAAATTGGTTCATTC-AATGCCAAAACGATTGACTGAAACTATAAAGAGGA-AGGGGTATCCTACCTCATACTAATTTAAT-TCATTATATATTAATAAGT-GCCTTT-TTTTATATTAATTTAAG------T---TTGTA---------------------CGCAGACTTTT------TCTTGCC--------CA-AAAACGTGTG-CATTTTTAGTTTCTTAAT-TTTAATTAAAT-------AAG----------------GT------------------------------------------------------------GTT-GATTTCAATAAATAAAAAGTAGCTATAATTTTGGAAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TCATTATGGAGGAATGGCTGAATATTTCCCCATCGGTGACTGAAAAATTGGTGCAATC-AATGCCAAAACGTTTGGAGGAAACTATCAAAAGAA-AGGGGTACTCCACTTCTTATTAAATAATA-G----------AATTAAGT-ATCATT-ATTAACCAACTTTGAAG------T---TTGTA---------------------CGCATATTTTT------TCTGGC---------AA-AAAATTCGTC-ACTTTTTCGTTTTTTAAT-TTTAATACATT-------AAG----------------TTAAG-------------------------------------------------------CTAT--------------------------------TATGACA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TCATTATGGAAGAATGGCTTAATATTTCCCCATCGGTGACTGAAAAATTGGTACAATC-AATGCCAAAACGTTTGGAGGAAGCTATCAAACGAA-AGGGGTACCCCACTTCTTATTAAAAATTA-G----------AATTAAGT-ACCATT-TTTAAGCAACTTTGAAG------T---TTGTA---------------------CGCATATTTTT------TCTGGC---------TA-AAAATTCGTC-ACTTTTTCGTTTTTTAAT-TTTAATAAATA-------AAG----------------TTAAG-------------------------------------------------------GTGTT---------------------AT--------GTTAATA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TTATTGTCGAAGAATGGAGCAAAATAACAGCAGAGGATACAACGAAATTGGTCCAGTC-AATGCCAAATCGGTTGGCTGAAGTTATAAAACGTA-AAGGGTATCCAACTTCGTACTTAATATTA-A----------AAAAATAC-GGAGTT-TTAATTGTTTTTTTGAT------T---TTGTA---------------------CGCATACTTTT------TCTGAG---------TG-AAAATATACT-TTTTTTAC-ATTTTTTGT-TATATTATTTA-------AAG----------------TTTAA-------------------------------------------------------GTGCTAGA-----------------AAG--------TGAGAAG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TTATTATGGAAGAATGGCTCAATATTTCCCCATCGGTGACCCAAAAATTGGTGCAATC-ATTGCCAAAACGTTTAAATGAAACTATTAAAAGAA-AGGGGTACCCCACTTCCTATTAAATACTA-G----------AATTAAGT-ACCTTT-ATTAAACAATTTTGAAA------C---TTGTA---------------------CGCATACTTTT------TCTTGT---------TA-AAATTTCATG-AATTTTTGGTTTTTAAAT-TTTAATAAGTT-------AAG----------------TTAT--------------------------------------------------------ATAA---------------------TAA--------GGAAAAT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TCATGCAGGAATAATGGAAAAAAA----AGCAGACGATATGTCGAAATAGGTCCACTC-AATGCCAAATCGGTTTTCTGAAAAAATTAATCGAA-AAGGATATCCAACTTCGTACTAATATATA-A----------AAA-AAAC-GT-GTT-GTTTCTAAATTTTATGT------T---TTGTA---------------------CGCATACTTTT------TCTGAA---------TG-AAATTTGGAC-TATTTTTTAATT--TAAT-TTTTTTAAATACAATCTAAAG----------------TTAAA-------------------------------------------------------GAGCT-------------------------------AGGAACT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TCAATGTCGAGGAATGGAATCAAATAACGGCGATGGATGCAAGGACATTGGTCCAATC-GATGACGAATATGTAGACTGAAGTTATAAAACATA-AAGGGTATCAAACTCCGTACTAAACTCGACGTACTTTGCCCAAAA-TATGGCTTTT--TCTAATACCATATGCA------T---TTGTA---------------------CGCATACTTTT------TCTGAT---------GCGAAATCCGGCC-AATTTGTACATTTTTATT-TATATTAGGAA-------AAG----------------TAAAG-------------------------------------------------------GTGCTAGA-----------------AAT--------TAATAAG	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TCATTATGGAAGAATGGCTTAATATTTCCCCATCGGTGACTG-AAAATTGGTACAATCAAATGCCAAAACGTTTGGAGGAAGCTATCAAACGAA-AGGGGTACCCCACTTCTTATTAAAAATTA-G----------ATTTAAGT-ACCATT-TTTAAGCAACTTTGAAG------T---TTGTA---------------------CGCATATTTTT------TCTGGC---------TA-AAAATTCGTC-ACTTTTTCGTTTTTTAAT-TTTAATAAATA-------AAG----------------TTAAG-------------------------------------------------------GTGTT---------------------TA--------TGTTAAT	Size	Hit Count	Total Norm	Total
No Reads

droYak3

TCATTGCAAAATATTGGCAAAATATCACCCCGGACGACACGGAAAAATTGGTCCAAAC-TATGCCAAAACGCTTGGACGAAGCAATTAAAAGAAAATGGGTATCCAACGTCATTATCATTTTTA-ATATTTTGTTAGTGTAAAC-GCCGTT-TTTTA-AGTATTTTTTG------T---TTGTA---------------------CGCATACTTTT------TCATGTGCCATATGCTA-AAAATTTGTG-CCT--------TTTTATT-TTTTATAAAAT---AAGAAAG----------------T-----ACTTAGAGCTAAGAA---------------------------------------AACC---------------------TAC--------GGAAAAA

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEre2

TAA-----------------AACTTCACCCCGGACGTCACCCAAAAATTGGTGCAATC-AATGCCAAAACGTTTGGCAGAAACCATTAAAAGAA-AGGGGTATCCAACTTCATATTTGATTTC--------------------------------------------------------------------------------------------------------------------------CCATG-AACTTGTACCTTTTTAAT-TTCTATAAAAT-------AAG----------------TTAAGTACTTAAAACTAAGAAAGCCTTCTAATATTA-TTA---ATAATAAATGTCTTTATAACG---------------------TAA--------AAAAGAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dwi_3747

scf2_1100000004954:3965067-3965217 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-12.8	-12.6	-12.6